Clone Name | baali18 |
---|---|
Clone Library Name | barley_pub |
>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +2 Query: 224 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 337 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)| Length = 629 Score = 31.6 bits (70), Expect = 1.6 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -1 Query: 469 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 290 NWS + K +GG + NC + GK KAK + + + LN ++ ++L L LV Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497 Query: 289 RL 284 +L Sbjct: 498 QL 499
>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H| antigen) Length = 2115 Score = 31.6 bits (70), Expect = 1.6 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 520 SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 347 ++ ++AEQ G E ERL + + Q +E G++E E + L +G+A+ D+ + A Sbjct: 969 AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025 Query: 346 SSRSLNMQQKTSLRLQLVE 290 + L M+ + +L Q VE Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +2 Query: 314 SFLLHIQTARRSHPDIVFGFP 376 S LL TA R HPD VFGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96
>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10| Length = 105 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 281 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 409 LK FDQ + RS ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54
>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA| reducing factor 3A) (Up-frameshift suppressor 3 homolog A) (hUpf3) Length = 476 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -3 Query: 557 QTRSQRSGRPLLQFESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLRE 378 + R +R R L + R E R R E +E Q+ EK VRIKL K P+ E Sbjct: 234 EKREERRRRELEK--KRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGE 291
>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein| Length = 90 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -3 Query: 461 DYREAASQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPP 300 D E SQ+ W W+K + ++ K + E +K Q D FFA EYA + PP Sbjct: 29 DIFEHISQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPP 88 Query: 299 A 297 A Sbjct: 89 A 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,834,676 Number of Sequences: 219361 Number of extensions: 1349538 Number of successful extensions: 3672 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3672 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)