ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baali14 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 379 bits (973), Expect = e-105 Identities = 188/189 (99%), Positives = 188/189 (99%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 248 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60 Query: 249 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 428 WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG Sbjct: 61 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120 Query: 429 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 608 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS Sbjct: 121 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 180 Query: 609 AGELESGNA 635 AGELESGNA Sbjct: 181 AGELESGNA 189
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 345 bits (884), Expect = 8e-95 Identities = 172/190 (90%), Positives = 179/190 (94%), Gaps = 2/190 (1%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 245 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59 Query: 246 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 422 +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM Sbjct: 60 DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119 Query: 423 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 602 GGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 120 GGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 179 Query: 603 MSAGELESGN 632 MSAGELESGN Sbjct: 180 MSAGELESGN 189
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 307 bits (787), Expect = 1e-83 Identities = 157/195 (80%), Positives = 172/195 (88%), Gaps = 6/195 (3%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 236 MAAAFSSTVGAPASTPT +FLGKKL K QV++AV YHGKSS +N RF MAA+ +DE + Sbjct: 1 MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60 Query: 237 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 410 TD +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F Sbjct: 61 QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120 Query: 411 DNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 590 DN M GFYIA FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 121 DNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180 Query: 591 NPIMMSAGELESGNA 635 PIMMSAGELESGNA Sbjct: 181 TPIMMSAGELESGNA 195
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 300 bits (767), Expect = 3e-81 Identities = 153/192 (79%), Positives = 167/192 (86%), Gaps = 4/192 (2%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 242 MA+AFSSTVGAPASTPT FLGKK+K YHG + +R VMAA+ +D+ + T Sbjct: 1 MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54 Query: 243 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 416 D +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN Sbjct: 55 DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114 Query: 417 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 596 TM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINP Sbjct: 115 TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 174 Query: 597 IMMSAGELESGN 632 IMMSAGELESGN Sbjct: 175 IMMSAGELESGN 186
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 256 bits (654), Expect = 4e-68 Identities = 130/184 (70%), Positives = 148/184 (80%) Frame = +3 Query: 84 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 263 S V APAST FLGKK V + + + K+N + A D++ + D+W+GLA Sbjct: 23 SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75 Query: 264 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 443 YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAP Sbjct: 76 YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135 Query: 444 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 623 AFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELE Sbjct: 136 AFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELE 195 Query: 624 SGNA 635 SGNA Sbjct: 196 SGNA 199
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 255 bits (652), Expect = 7e-68 Identities = 131/200 (65%), Positives = 155/200 (77%), Gaps = 11/200 (5%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 218 MAAA+S TVGA P + G + + + + G S K + F ++A E Sbjct: 1 MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59 Query: 219 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 395 + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGL Sbjct: 60 ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119 Query: 396 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 575 R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179 Query: 576 AKMGINPIMMSAGELESGNA 635 AKMGINPIMMSAGELESGNA Sbjct: 180 AKMGINPIMMSAGELESGNA 199
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 255 bits (652), Expect = 7e-68 Identities = 131/200 (65%), Positives = 155/200 (77%), Gaps = 11/200 (5%) Frame = +3 Query: 69 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 218 MAAA+S TVGA P + G + + + + G S K + F ++A E Sbjct: 1 MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59 Query: 219 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 395 + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGL Sbjct: 60 ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119 Query: 396 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 575 R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179 Query: 576 AKMGINPIMMSAGELESGNA 635 AKMGINPIMMSAGELESGNA Sbjct: 180 AKMGINPIMMSAGELESGNA 199
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 252 bits (643), Expect = 7e-67 Identities = 128/186 (68%), Positives = 149/186 (80%), Gaps = 2/186 (1%) Frame = +3 Query: 84 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 257 SS+ P+ST FLG LKK VN +SK + ++ ++DE + TDK WKG Sbjct: 22 SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73 Query: 258 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 437 LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI Sbjct: 74 LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133 Query: 438 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 617 APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE Sbjct: 134 APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193 Query: 618 LESGNA 635 LESGNA Sbjct: 194 LESGNA 199
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 249 bits (636), Expect = 5e-66 Identities = 131/199 (65%), Positives = 148/199 (74%), Gaps = 16/199 (8%) Frame = +3 Query: 87 STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 224 ST+GA TP T F GK LKK V+ ++K+ R V ++ Sbjct: 6 STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64 Query: 225 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 398 D K+ TD +WKGL D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124 Query: 399 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 578 +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184 Query: 579 KMGINPIMMSAGELESGNA 635 KMGINPIMMSAGELESGNA Sbjct: 185 KMGINPIMMSAGELESGNA 203
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 247 bits (631), Expect = 2e-65 Identities = 125/183 (68%), Positives = 150/183 (81%), Gaps = 3/183 (1%) Frame = +3 Query: 96 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 266 G AS P++ F G LKK ++S V + K + + V A + I+E + T D+W+GLAY Sbjct: 22 GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80 Query: 267 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 446 D+SDDQQDITRGKG+VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPA Sbjct: 81 DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140 Query: 447 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 626 F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200 Query: 627 GNA 635 GNA Sbjct: 201 GNA 203
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 246 bits (629), Expect = 3e-65 Identities = 126/190 (66%), Positives = 146/190 (76%), Gaps = 4/190 (2%) Frame = +3 Query: 78 AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 245 + +++V + T F GK LKK V+ NR +AAE + D K+ T D Sbjct: 17 SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73 Query: 246 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 425 +WKGL D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ Sbjct: 74 RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133 Query: 426 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 605 GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMM Sbjct: 134 GFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMM 193 Query: 606 SAGELESGNA 635 SAGELESGNA Sbjct: 194 SAGELESGNA 203
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 245 bits (625), Expect = 9e-65 Identities = 130/183 (71%), Positives = 146/183 (79%), Gaps = 3/183 (1%) Frame = +3 Query: 96 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 266 GA AS PT+ F G LKK V S V + K + + V A + I+E + T D+WKGLAY Sbjct: 22 GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80 Query: 267 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 446 DISDDQQDITRGKG+VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPA Sbjct: 81 DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138 Query: 447 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 626 F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 198 Query: 627 GNA 635 GNA Sbjct: 199 GNA 201
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 244 bits (623), Expect = 2e-64 Identities = 127/180 (70%), Positives = 140/180 (77%), Gaps = 1/180 (0%) Frame = +3 Query: 99 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 275 A AS PT+ FLG LKK SS+ TV AAEN E++NTDKW LA D S Sbjct: 23 AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77 Query: 276 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 455 DDQ DI RGKG+VDSLFQAP GTH + SS+EY SQGLRKYD DN +G FYIAPAFMD Sbjct: 78 DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137 Query: 456 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 635 KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 197
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 244 bits (622), Expect = 2e-64 Identities = 126/201 (62%), Positives = 147/201 (73%), Gaps = 14/201 (6%) Frame = +3 Query: 75 AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 212 AA ST+GA T N FLG +LK V+ +SK F ++A Sbjct: 2 AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55 Query: 213 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 392 ++ +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G Sbjct: 56 EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115 Query: 393 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 572 LR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV Sbjct: 116 LRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 175 Query: 573 FAKMGINPIMMSAGELESGNA 635 FAKMGINPIMMSAGELESGNA Sbjct: 176 FAKMGINPIMMSAGELESGNA 196
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 243 bits (621), Expect = 3e-64 Identities = 125/201 (62%), Positives = 146/201 (72%), Gaps = 14/201 (6%) Frame = +3 Query: 75 AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 212 AA ST+GA + P T F GK LKK V+ +NR + Sbjct: 2 AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58 Query: 213 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 392 A+ +DE + D+WKGL + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ Sbjct: 59 AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117 Query: 393 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 572 L+ Y DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV Sbjct: 118 LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 177 Query: 573 FAKMGINPIMMSAGELESGNA 635 F KMGINPIMMSAGELESGNA Sbjct: 178 FRKMGINPIMMSAGELESGNA 198
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 171 bits (432), Expect = 2e-42 Identities = 84/138 (60%), Positives = 105/138 (76%), Gaps = 3/138 (2%) Frame = +3 Query: 231 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 401 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 402 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 581 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154 Query: 582 MGINPIMMSAGELESGNA 635 +GI PI+MSAGELESGNA Sbjct: 155 LGIAPIVMSAGELESGNA 172
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 97.1 bits (240), Expect = 4e-20 Identities = 42/69 (60%), Positives = 56/69 (81%) Frame = +3 Query: 429 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 608 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 609 AGELESGNA 635 GELES +A Sbjct: 63 GGELESPDA 71
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 96.7 bits (239), Expect = 5e-20 Identities = 42/69 (60%), Positives = 56/69 (81%) Frame = +3 Query: 429 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 608 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 609 AGELESGNA 635 GELES +A Sbjct: 63 GGELESPDA 71
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 378 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 557 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 558 QC 563 QC Sbjct: 388 QC 389
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +3 Query: 510 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 620 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +3 Query: 510 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 620 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -2 Query: 434 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 258 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +3 Query: 99 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 278 +PA+ P+ +G+K++ V+ ++ G K++ + + KR T ++ G + +SD Sbjct: 35 SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89 Query: 279 D--QQDITRGKGIVDSLFQAPTGDG 347 D ++ + R K +D + + T DG Sbjct: 90 DTIRRMVRRRKERIDIIMPSKTKDG 114
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -3 Query: 346 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 200 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 291 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 461 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 462 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 548 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 4.6 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -2 Query: 539 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 360 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 359 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 255 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -3 Query: 589 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 452 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 504 KIPLILGIWGGKGQGKSFQCELVFAKMG 587 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 506 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 342 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 341 ARGRLEERVHDALPSGDVLLVVG 273 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 291 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 461 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 462 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 548 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 291 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 461 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 462 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 548 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 291 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 461 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 462 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 548 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 461 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE 625 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIE 1206
>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related| protein) (Fragment) Length = 255 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +3 Query: 9 STSTAARIHRC*QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 152 S+ ++ +++ QG PS + + G+PA P+ FLGK +K V Sbjct: 40 SSLLSSLMNKMSQGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 480 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 620 N L +P+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 510 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 620 PL + I G GK QCEL+ K G+ + +SAG+L Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 461 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE 625 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIE 1982
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +3 Query: 165 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 344 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 345 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 503 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 461 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE 625 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIE 1981 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,970,158 Number of Sequences: 219361 Number of extensions: 1866852 Number of successful extensions: 6647 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 6368 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6634 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
