Clone Name | baali11 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1230 Score = 692 bits (349), Expect = 0.0 Identities = 522/579 (90%), Gaps = 1/579 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 209 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 268 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggttggcgtgac 123 |||| |||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||| Sbjct: 269 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggttggtgtgac 327 Query: 124 gcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgcaagacaggatcaa 183 |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 328 acctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgcaagacaagatcaa 387 Query: 184 gagtatgccagaagagtttcaaccagccacccctaagggaccagacccgaaatggcgata 243 ||||||||| || |||||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 388 gagtatgcctgaggagtttcagcccgccactcctaagggtccagacccgaaatggcggta 447 Query: 244 catgtggagagtgggccctcgcccctcgaatacccgctttaaggagctgaatgcagaacc 303 |||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 448 tatgtggagagtgggtcctcgcccagcgaatacccgttttaaggagctgaattcggaacc 507 Query: 304 tgttattcctgatgggttacctgagtggaaagagacaatggattcttggggtgcaaaaat 363 |||||| |||||||| || ||||| ||||||||||| |||||||| |||||| | ||||| Sbjct: 508 tgttatccctgatggattgcctgaatggaaagagaccatggattcctggggttctaaaat 567 Query: 364 gatttctgccattgaggttgttgctgagatggcggcgattggatttggcttgtcaaagga 423 ||||||||| ||||||||||||||||||||||| || |||||||||| ||| ||||||| Sbjct: 568 gatttctgcaattgaggttgttgctgagatggctgcagttggatttggattgccaaagga 627 Query: 424 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtaatct 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 628 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtgacct 687 Query: 484 gctgcgtcacggttctgagggcacagtgtttgctgggttccattatgatcttaatttctt 543 ||| || |||||||||||||| || ||||||||||||||||||||||| |||||| | Sbjct: 688 tgagcggcatggttctgagggcactgtttttgctgggttccattatgatctcaatttcct 747 Query: 544 gaccatacacggtcgtagtagatttccaggcctgaacat 582 ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 748 gaccatacatggtcgaagtagatttccaggcctgaacat 786
>ref|XM_506940.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.18 mRNA Length = 1650 Score = 692 bits (349), Expect = 0.0 Identities = 522/579 (90%), Gaps = 1/579 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 335 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 394 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggttggcgtgac 123 |||| |||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||| Sbjct: 395 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggttggtgtgac 453 Query: 124 gcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgcaagacaggatcaa 183 |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 454 acctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgcaagacaagatcaa 513 Query: 184 gagtatgccagaagagtttcaaccagccacccctaagggaccagacccgaaatggcgata 243 ||||||||| || |||||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 514 gagtatgcctgaggagtttcagcccgccactcctaagggtccagacccgaaatggcggta 573 Query: 244 catgtggagagtgggccctcgcccctcgaatacccgctttaaggagctgaatgcagaacc 303 |||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 574 tatgtggagagtgggtcctcgcccagcgaatacccgttttaaggagctgaattcggaacc 633 Query: 304 tgttattcctgatgggttacctgagtggaaagagacaatggattcttggggtgcaaaaat 363 |||||| |||||||| || ||||| ||||||||||| |||||||| |||||| | ||||| Sbjct: 634 tgttatccctgatggattgcctgaatggaaagagaccatggattcctggggttctaaaat 693 Query: 364 gatttctgccattgaggttgttgctgagatggcggcgattggatttggcttgtcaaagga 423 ||||||||| ||||||||||||||||||||||| || |||||||||| ||| ||||||| Sbjct: 694 gatttctgcaattgaggttgttgctgagatggctgcagttggatttggattgccaaagga 753 Query: 424 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtaatct 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 754 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtgacct 813 Query: 484 gctgcgtcacggttctgagggcacagtgtttgctgggttccattatgatcttaatttctt 543 ||| || |||||||||||||| || ||||||||||||||||||||||| |||||| | Sbjct: 814 tgagcggcatggttctgagggcactgtttttgctgggttccattatgatctcaatttcct 873 Query: 544 gaccatacacggtcgtagtagatttccaggcctgaacat 582 ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 874 gaccatacatggtcgaagtagatttccaggcctgaacat 912
>dbj|AK121801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097G14, full insert sequence Length = 1632 Score = 692 bits (349), Expect = 0.0 Identities = 522/579 (90%), Gaps = 1/579 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 209 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 268 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggttggcgtgac 123 |||| |||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||| Sbjct: 269 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggttggtgtgac 327 Query: 124 gcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgcaagacaggatcaa 183 |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 328 acctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgcaagacaagatcaa 387 Query: 184 gagtatgccagaagagtttcaaccagccacccctaagggaccagacccgaaatggcgata 243 ||||||||| || |||||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 388 gagtatgcctgaggagtttcagcccgccactcctaagggtccagacccgaaatggcggta 447 Query: 244 catgtggagagtgggccctcgcccctcgaatacccgctttaaggagctgaatgcagaacc 303 |||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 448 tatgtggagagtgggtcctcgcccagcgaatacccgttttaaggagctgaattcggaacc 507 Query: 304 tgttattcctgatgggttacctgagtggaaagagacaatggattcttggggtgcaaaaat 363 |||||| |||||||| || ||||| ||||||||||| |||||||| |||||| | ||||| Sbjct: 508 tgttatccctgatggattgcctgaatggaaagagaccatggattcctggggttctaaaat 567 Query: 364 gatttctgccattgaggttgttgctgagatggcggcgattggatttggcttgtcaaagga 423 ||||||||| ||||||||||||||||||||||| || |||||||||| ||| ||||||| Sbjct: 568 gatttctgcaattgaggttgttgctgagatggctgcagttggatttggattgccaaagga 627 Query: 424 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtaatct 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 628 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtgacct 687 Query: 484 gctgcgtcacggttctgagggcacagtgtttgctgggttccattatgatcttaatttctt 543 ||| || |||||||||||||| || ||||||||||||||||||||||| |||||| | Sbjct: 688 tgagcggcatggttctgagggcactgtttttgctgggttccattatgatctcaatttcct 747 Query: 544 gaccatacacggtcgtagtagatttccaggcctgaacat 582 ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 748 gaccatacatggtcgaagtagatttccaggcctgaacat 786
>dbj|AK067050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092A12, full insert sequence Length = 1650 Score = 692 bits (349), Expect = 0.0 Identities = 522/579 (90%), Gaps = 1/579 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 335 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 394 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggttggcgtgac 123 |||| |||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||| Sbjct: 395 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggttggtgtgac 453 Query: 124 gcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgcaagacaggatcaa 183 |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 454 acctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgcaagacaagatcaa 513 Query: 184 gagtatgccagaagagtttcaaccagccacccctaagggaccagacccgaaatggcgata 243 ||||||||| || |||||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 514 gagtatgcctgaggagtttcagcccgccactcctaagggtccagacccgaaatggcggta 573 Query: 244 catgtggagagtgggccctcgcccctcgaatacccgctttaaggagctgaatgcagaacc 303 |||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||| Sbjct: 574 tatgtggagagtgggtcctcgcccagcgaatacccgttttaaggagctgaattcggaacc 633 Query: 304 tgttattcctgatgggttacctgagtggaaagagacaatggattcttggggtgcaaaaat 363 |||||| |||||||| || ||||| ||||||||||| |||||||| |||||| | ||||| Sbjct: 634 tgttatccctgatggattgcctgaatggaaagagaccatggattcctggggttctaaaat 693 Query: 364 gatttctgccattgaggttgttgctgagatggcggcgattggatttggcttgtcaaagga 423 ||||||||| ||||||||||||||||||||||| || |||||||||| ||| ||||||| Sbjct: 694 gatttctgcaattgaggttgttgctgagatggctgcagttggatttggattgccaaagga 753 Query: 424 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtaatct 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 754 tgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagtgacct 813 Query: 484 gctgcgtcacggttctgagggcacagtgtttgctgggttccattatgatcttaatttctt 543 ||| || |||||||||||||| || ||||||||||||||||||||||| |||||| | Sbjct: 814 tgagcggcatggttctgagggcactgtttttgctgggttccattatgatctcaatttcct 873 Query: 544 gaccatacacggtcgtagtagatttccaggcctgaacat 582 ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 874 gaccatacatggtcgaagtagatttccaggcctgaacat 912
>gb|AY108869.1| Zea mays PCO130984 mRNA sequence Length = 1058 Score = 375 bits (189), Expect = e-100 Identities = 330/377 (87%) Strand = Plus / Plus Query: 206 ccagccacccctaagggaccagacccgaaatggcgatacatgtggagagtgggccctcgc 265 |||||||| ||||| || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 45 ccagccactcctaaagggccggacccgaaatggcgatacatgtggagagtgggtcctcgc 104 Query: 266 ccctcgaatacccgctttaaggagctgaatgcagaacctgttattcctgatgggttacct 325 || | || ||||| |||||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 105 cctacaaacacccgttttaaggagctgaactcagaacctgttatccctgagggattacct 164 Query: 326 gagtggaaagagacaatggattcttggggtgcaaaaatgatttctgccattgaggttgtt 385 |||||| |||||| |||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 165 gagtgggaagagatgatggattcctggggttctaaaatgatttctgcaattgaggttgtt 224 Query: 386 gctgagatggcggcgattggatttggcttgtcaaaggatgcatttacctctttgatgaag 445 ||||||||||| || || || |||||| | || |||||||||||||| ||||||||||| Sbjct: 225 gctgagatggctgcaataggctttggcctatcgaaggatgcatttacttctttgatgaaa 284 Query: 446 gagggaccacacctcctagcaccaactggaagtaatctgctgcgtcacggttctgagggc 505 ||||||||||| ||||| ||||||||||||||| | |||| |||||| |||||||||||| Sbjct: 285 gagggaccacatctcctcgcaccaactggaagtgacctgcagcgtcatggttctgagggc 344 Query: 506 acagtgtttgctgggttccattatgatcttaatttcttgaccatacacggtcgtagtaga 565 || || |||||||| ||||| |||||||||||||||||||| ||||| || || |||||| Sbjct: 345 accgtttttgctggattccactatgatcttaatttcttgacgatacatggccgaagtaga 404 Query: 566 tttccaggcctgaacat 582 || |||||||| ||||| Sbjct: 405 ttcccaggccttaacat 421
>gb|BT018705.1| Zea mays clone EL01N0515E01.d mRNA sequence Length = 1290 Score = 351 bits (177), Expect = 2e-93 Identities = 327/377 (86%) Strand = Plus / Plus Query: 206 ccagccacccctaagggaccagacccgaaatggcgatacatgtggagagtgggccctcgc 265 |||||||| ||||| || || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 290 ccagccactcctaaagggccggacccgaaatggcggtacatgtggagagtgggtcctcgc 349 Query: 266 ccctcgaatacccgctttaaggagctgaatgcagaacctgttattcctgatgggttacct 325 || | || ||||| ||||||||||| || ||||||||||||||||||| || |||||| Sbjct: 350 cctacaaacacccgttttaaggagctaaactcagaacctgttattcctgagggattacct 409 Query: 326 gagtggaaagagacaatggattcttggggtgcaaaaatgatttctgccattgaggttgtt 385 |||||| |||||| |||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 410 gagtgggaagagatgatggattcctggggttctaaaatgatttctgcaattgaggttgtt 469 Query: 386 gctgagatggcggcgattggatttggcttgtcaaaggatgcatttacctctttgatgaag 445 ||||||||||| || || || |||||| | || |||||||||||||| ||||| || || Sbjct: 470 gctgagatggctgcaataggctttggcctatcgaaggatgcatttacttctttcattaaa 529 Query: 446 gagggaccacacctcctagcaccaactggaagtaatctgctgcgtcacggttctgagggc 505 ||||||||||| ||||| ||||||||||||||| | |||| |||||| |||||||||||| Sbjct: 530 gagggaccacatctcctcgcaccaactggaagtgacctgcagcgtcatggttctgagggc 589 Query: 506 acagtgtttgctgggttccattatgatcttaatttcttgaccatacacggtcgtagtaga 565 || || |||||||| ||||| |||||||||||||||||||| ||||| || || |||||| Sbjct: 590 accgtttttgctggattccactatgatcttaatttcttgacgatacatggccgaagtaga 649 Query: 566 tttccaggcctgaacat 582 || |||||||| ||||| Sbjct: 650 ttcccaggccttaacat 666 Score = 123 bits (62), Expect = 7e-25 Identities = 123/143 (86%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 89 cgctgctccgccgcggacaacgaccgcttcctcgacgtcgtcgagcgctacttcgcccga 148 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggttggcgtgac 123 |||| |||| | ||||||||||||| | || ||||||||||||||||| |||| || || Sbjct: 149 tccgccgacgcaaagcgcctccaggaa-cggccccacctccactaccattttggtgtcac 207 Query: 124 gcctgaaggcgtggaggtacctc 146 || ||||| |||||||| |||| Sbjct: 208 acccgaaggggtggaggtgcctc 230
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 216 bits (109), Expect = 6e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 111 aggttggcgtgacgcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgc 170 ||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 29802466 aggttggtgtgacacctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgc 29802525 Query: 171 aagacaggatcaagagtatgccagaagagtttcaaccagccacccctaagggaccagacc 230 |||||| ||||||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 29802526 aagacaagatcaagagtatgcctgaggagtttcagcccgccactcctaagggtccagacc 29802585 Query: 231 cgaaatggcgatacatgtggagagtgggccctcgcccctcgaatacccgctttaagg 287 |||||||||| || |||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 29802586 cgaaatggcggtatatgtggagagtgggtcctcgcccagcgaatacccgttttaagg 29802642 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 447 agggaccacacctcctagcaccaactggaagtaatctgctgcgtcacggttctgagggca 506 |||||||||||||||||||||||||||||||| | || ||| || ||||||||||||| Sbjct: 29803229 agggaccacacctcctagcaccaactggaagtgaccttgagcggcatggttctgagggca 29803288 Query: 507 cagtgtttgctgggttccattatgatcttaatttcttgaccatacacggtcgtagtagat 566 | || ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| Sbjct: 29803289 ctgtttttgctgggttccattatgatctcaatttcctgaccatacatggtcgaagtagat 29803348 Query: 567 ttccaggcctgaacat 582 |||||||||||||||| Sbjct: 29803349 ttccaggcctgaacat 29803364 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 29802174 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 29802233 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggt 114 |||| |||||||||| ||||||||| |||||||| |||||||||| ||||| Sbjct: 29802234 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggt 29802283 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 285 aggagctgaatgcagaacctgttattcctgatgggttacctgagtggaaagagacaatgg 344 ||||||||||| | ||||||||||| |||||||| || ||||| ||||||||||| |||| Sbjct: 29802753 aggagctgaattcggaacctgttatccctgatggattgcctgaatggaaagagaccatgg 29802812 Query: 345 attcttggggtgcaaaaatgatttctgccattgaggt 381 |||| |||||| | |||||||||||||| |||||||| Sbjct: 29802813 attcctggggttctaaaatgatttctgcaattgaggt 29802849 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 378 aggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttacctctt 437 ||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||| Sbjct: 29802919 aggttgttgctgagatggctgcagttggatttggattgccaaaggatgcatttacctctt 29802978 Query: 438 tgatgaaggagg 449 |||||||||||| Sbjct: 29802979 tgatgaaggagg 29802990
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 216 bits (109), Expect = 6e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 111 aggttggcgtgacgcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgc 170 ||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 58811 aggttggtgtgacacctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgc 58870 Query: 171 aagacaggatcaagagtatgccagaagagtttcaaccagccacccctaagggaccagacc 230 |||||| ||||||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 58871 aagacaagatcaagagtatgcctgaggagtttcagcccgccactcctaagggtccagacc 58930 Query: 231 cgaaatggcgatacatgtggagagtgggccctcgcccctcgaatacccgctttaagg 287 |||||||||| || |||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 58931 cgaaatggcggtatatgtggagagtgggtcctcgcccagcgaatacccgttttaagg 58987 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 447 agggaccacacctcctagcaccaactggaagtaatctgctgcgtcacggttctgagggca 506 |||||||||||||||||||||||||||||||| | || ||| || ||||||||||||| Sbjct: 59574 agggaccacacctcctagcaccaactggaagtgaccttgagcggcatggttctgagggca 59633 Query: 507 cagtgtttgctgggttccattatgatcttaatttcttgaccatacacggtcgtagtagat 566 | || ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| Sbjct: 59634 ctgtttttgctgggttccattatgatctcaatttcctgaccatacatggtcgaagtagat 59693 Query: 567 ttccaggcctgaacat 582 |||||||||||||||| Sbjct: 59694 ttccaggcctgaacat 59709 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 58519 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 58578 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggt 114 |||| |||||||||| ||||||||| |||||||| |||||||||| ||||| Sbjct: 58579 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggt 58628 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 285 aggagctgaatgcagaacctgttattcctgatgggttacctgagtggaaagagacaatgg 344 ||||||||||| | ||||||||||| |||||||| || ||||| ||||||||||| |||| Sbjct: 59098 aggagctgaattcggaacctgttatccctgatggattgcctgaatggaaagagaccatgg 59157 Query: 345 attcttggggtgcaaaaatgatttctgccattgaggt 381 |||| |||||| | |||||||||||||| |||||||| Sbjct: 59158 attcctggggttctaaaatgatttctgcaattgaggt 59194 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 378 aggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttacctctt 437 ||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||| Sbjct: 59264 aggttgttgctgagatggctgcagttggatttggattgccaaaggatgcatttacctctt 59323 Query: 438 tgatgaaggagg 449 |||||||||||| Sbjct: 59324 tgatgaaggagg 59335
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 216 bits (109), Expect = 6e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 111 aggttggcgtgacgcctgaaggcgtggaggtacctcgcagcctcgtcgacaaggagatgc 170 ||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 171445 aggttggtgtgacacctgaaggcgtggaggtacctcgcagtcttgtcgacaaggagatgc 171504 Query: 171 aagacaggatcaagagtatgccagaagagtttcaaccagccacccctaagggaccagacc 230 |||||| ||||||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 171505 aagacaagatcaagagtatgcctgaggagtttcagcccgccactcctaagggtccagacc 171564 Query: 231 cgaaatggcgatacatgtggagagtgggccctcgcccctcgaatacccgctttaagg 287 |||||||||| || |||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 171565 cgaaatggcggtatatgtggagagtgggtcctcgcccagcgaatacccgttttaagg 171621 Score = 167 bits (84), Expect = 5e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 447 agggaccacacctcctagcaccaactggaagtaatctgctgcgtcacggttctgagggca 506 |||||||||||||||||||||||||||||||| | || ||| || ||||||||||||| Sbjct: 172208 agggaccacacctcctagcaccaactggaagtgaccttgagcggcatggttctgagggca 172267 Query: 507 cagtgtttgctgggttccattatgatcttaatttcttgaccatacacggtcgtagtagat 566 | || ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| Sbjct: 172268 ctgtttttgctgggttccattatgatctcaatttcctgaccatacatggtcgaagtagat 172327 Query: 567 ttccaggcctgaacat 582 |||||||||||||||| Sbjct: 172328 ttccaggcctgaacat 172343 Score = 129 bits (65), Expect = 1e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 4 cgctgcacggccgccgncaacgaccgcttcctcgnagtcgtcgagcgctacttcgcccga 63 |||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 171153 cgctgccccgccgccgacaacgaccgcttcctcgacgtcgtcgagcactacttcgcccga 171212 Query: 64 tccgacgactccaagcgcctccaggnagcgcccccacctccactaccaggt 114 |||| |||||||||| ||||||||| |||||||| |||||||||| ||||| Sbjct: 171213 tccgccgactccaagtgcctccagg-agcgccccaacctccactatcaggt 171262 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 285 aggagctgaatgcagaacctgttattcctgatgggttacctgagtggaaagagacaatgg 344 ||||||||||| | ||||||||||| |||||||| || ||||| ||||||||||| |||| Sbjct: 171732 aggagctgaattcggaacctgttatccctgatggattgcctgaatggaaagagaccatgg 171791 Query: 345 attcttggggtgcaaaaatgatttctgccattgaggt 381 |||| |||||| | |||||||||||||| |||||||| Sbjct: 171792 attcctggggttctaaaatgatttctgcaattgaggt 171828 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 378 aggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttacctctt 437 ||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||| Sbjct: 171898 aggttgttgctgagatggctgcagttggatttggattgccaaaggatgcatttacctctt 171957 Query: 438 tgatgaaggagg 449 |||||||||||| Sbjct: 171958 tgatgaaggagg 171969
>gb|BT018944.1| Zea mays clone Contig92.F mRNA sequence Length = 777 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 419 aaggatgcatttacctctttgatgaaggagggaccacacctcctagcaccaactggaagt 478 |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 756 aaggatgcatttacttctttgatgaaagagggaccacatctcctcgcaccaactggaagt 697 Query: 479 aatctgctgcgtcacggttctgagggcacagtgtttgctgggttccattatgatcttaat 538 | |||| |||||| |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 696 gacctgcagcgtcatggttctgagggcaccgtttttgctggattccactatgatcttaat 637 Query: 539 ttcttgaccatacacggtcgtagtagatttccaggcctgaacat 582 |||||||| ||||| || || |||||||| |||||||| ||||| Sbjct: 636 ttcttgacgatacatggccgaagtagattcccaggccttaacat 593
>gb|AY685681.1| Gossypium bickii unknown mRNA Length = 529 Score = 113 bits (57), Expect = 7e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 230 ccgaaatggcgatacatgtggagagtgggccctcgcccctcgaatacccgctttaaggag 289 ||||| |||||||||||||||||||||||||||||||| || || ||||||||| |||| Sbjct: 381 ccgaagtggcgatacatgtggagagtgggccctcgcccttcaaagacccgctttcaggaa 440 Query: 290 ctgaatgcagaacctgttattcctgatgggttacctgagtggaaagagacaatggattct 349 || ||| |||||||||| || ||||| || || ||||| ||||||||||| ||||| || Sbjct: 441 cttaattcagaacctgtcatacctgaaggtttccctgaatggaaagagaccatggactca 500 Query: 350 tgggg 354 ||||| Sbjct: 501 tgggg 505
>gb|AY685680.1| Gossypium arboreum unknown mRNA Length = 529 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 236 tggcgatacatgtggagagtgggccctcgcccctcgaatacccgctttaaggagctgaat 295 |||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| || ||| Sbjct: 387 tggcgatatatgtggagagtgggccctcgcccttcgaagacccgctttcaggaacttaat 446 Query: 296 gcagaacctgttattcctgatgggttacctgagtggaaagagacaatggattcttgggg 354 |||||||||| || ||||| || || ||||| ||||||||||| ||||| || ||||| Sbjct: 447 tcagaacctgtcatacctgaaggtttccctgaatggaaagagaccatggactcatgggg 505
>gb|BT013946.1| Lycopersicon esculentum clone 132969R, mRNA sequence Length = 1373 Score = 67.9 bits (34), Expect = 4e-08 Identities = 202/258 (78%) Strand = Plus / Plus Query: 221 ggaccagacccgaaatggcgatacatgtggagagtgggccctcgcccctcgaatacccgc 280 ||||||||||| |||||| |||||||||||||||| || || || || || |||| | Sbjct: 463 ggaccagaccctaaatggagatacatgtggagagttggtccccgtccaaagattaccagt 522 Query: 281 tttaaggagctgaatgcagaacctgttattcctgatgggttacctgagtggaaagagaca 340 |||||||| |||||| |||| || || || ||||| || || ||||| |||||| || Sbjct: 523 tttaaggaactgaattcagagccagtaatacctgagggctttcctgaatggaaatgtact 582 Query: 341 atggattcttggggtgcaaaaatgatttctgccattgaggttgttgctgagatggcggcg 400 ||||| || ||||| || ||||| ||||| | ||| |||||| || ||||| ||| Sbjct: 583 atggactcatggggatataagatgatatctgctgtagagtctgttgcagaaatggctgcg 642 Query: 401 attggatttggcttgtcaaaggatgcatttacctctttgatgaaggagggaccacacctc 460 ||||| ||||| | ||||||||||||||||| || || ||| || |||||||||| || Sbjct: 643 attggttttggtctctcaaaggatgcatttacttccttaatgcagcagggaccacatctg 702 Query: 461 ctagcaccaactggaagt 478 || || ||||| |||||| Sbjct: 703 cttgctccaacgggaagt 720
>ref|NM_124176.2| Arabidopsis thaliana unknown protein AT5G48020 mRNA, complete cds Length = 1465 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 673 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 730
>gb|BT008313.1| Arabidopsis thaliana At5g48020 gene, complete cds Length = 1068 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 506 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 563
>emb|BX831750.1|CNS0A0VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 631 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 688
>emb|BX830783.1|CNS0A0UF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 564 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 621
>emb|BX831298.1|CNS0A0TT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1352 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 581 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 638
>gb|AY087978.1| Arabidopsis thaliana clone 40096 mRNA, complete sequence Length = 1455 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 673 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 730
>dbj|AB017064.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDN11 Length = 83373 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 378 aggttgttgctgagatggcggcgattggatttggcttgtcaaaggatgcatttac 432 ||||||||||||| ||||| || ||||| ||||| ||| | |||||||||||||| Sbjct: 38728 aggttgttgctgaaatggcagcaattgggtttggtttgcctaaggatgcatttac 38674
>gb|AC010364.6| Homo sapiens chromosome 5 clone CTD-2042D5, complete sequence Length = 163400 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 500 gagggcacagtgtttgctgggtt 522 ||||||||||||||||||||||| Sbjct: 26858 gagggcacagtgtttgctgggtt 26836
>emb|BX831301.1|CNS0A0TM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1291 Score = 46.1 bits (23), Expect = 0.13 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 375 ttgaggttgttgctgagatggcggcgattggatttggcttgtc-aaaggatgcatttac 432 |||||||||||||||| ||||| || ||||| ||||| ||| | || |||||||||||| Sbjct: 555 ttgaggttgttgctgaaatggcagcaattgggtttggtttgcctaagggatgcatttac 613
>gb|AC010450.6|AC010450 Homo sapiens chromosome 5 clone CTD-2242D16, complete sequence Length = 108916 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 500 gagggcacagtgtttgctgggtt 522 ||||||||||||||||||||||| Sbjct: 90078 gagggcacagtgtttgctgggtt 90056
>gb|AC006406.1|AC006406 Homo sapiens, clone hRPK.25_A_1, complete sequence Length = 159115 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 gagggcacagtgtttgctgggtt 522 ||||||||||||||||||||||| Sbjct: 135969 gagggcacagtgtttgctgggtt 135991
>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence Length = 167163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 25786 ccgctttaaggagctgaatgc 25766
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 ggagctgaatgcagaacctgt 306 ||||||||||||||||||||| Sbjct: 46780 ggagctgaatgcagaacctgt 46760
>gb|AY254381.2| Emericella nidulans adenylate-forming enzyme (afeA) gene, complete cds Length = 3852 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 gcggcgattggatttggcttg 415 ||||||||||||||||||||| Sbjct: 1240 gcggcgattggatttggcttg 1260
>emb|Y12861.1|DMPAPSSYN D.melanogaster mRNA for bifunctional ATP sulfurylase/APS kinase Length = 2445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1457 ccgctttaaggagctgaatgc 1477
>gb|AC009381.10| Drosophila melanogaster 3L BAC RP98-13N10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 144569 ccgctttaaggagctgaatgc 144549
>ref|NM_168824.1| Drosophila melanogaster PAPS synthetase CG8363-RD, transcript variant D (Paps), mRNA Length = 2463 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1469 ccgctttaaggagctgaatgc 1489
>ref|NM_168823.1| Drosophila melanogaster PAPS synthetase CG8363-RC, transcript variant C (Paps), mRNA Length = 2504 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1510 ccgctttaaggagctgaatgc 1530
>ref|NM_168822.1| Drosophila melanogaster PAPS synthetase CG8363-RB, transcript variant B (Paps), mRNA Length = 2398 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1404 ccgctttaaggagctgaatgc 1424
>ref|NM_168821.1| Drosophila melanogaster PAPS synthetase CG8363-RA, transcript variant A (Paps), mRNA Length = 2389 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1395 ccgctttaaggagctgaatgc 1415
>ref|NM_079447.2| Drosophila melanogaster PAPS synthetase CG8363-RE, transcript variant E (Paps), mRNA Length = 2401 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1407 ccgctttaaggagctgaatgc 1427
>dbj|AK160357.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930014C21 product:SH3 domain-binding glutamic acid-rich-like protein 2, full insert sequence Length = 1837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 ggagctgaatgcagaacctgt 306 ||||||||||||||||||||| Sbjct: 1455 ggagctgaatgcagaacctgt 1435
>gb|AY051724.1| Drosophila melanogaster LD25351 full length cDNA Length = 2400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 1395 ccgctttaaggagctgaatgc 1415
>dbj|AK049293.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330020A19 product:unclassifiable, full insert sequence Length = 2528 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 ggagctgaatgcagaacctgt 306 ||||||||||||||||||||| Sbjct: 500 ggagctgaatgcagaacctgt 480
>dbj|AK076202.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830431K01 product:SH3BGRL2-LIKE PROTEIN (FOVEA-ASSOCIATED SH3 DOMAIN BINDING PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 ggagctgaatgcagaacctgt 306 ||||||||||||||||||||| Sbjct: 1455 ggagctgaatgcagaacctgt 1435
>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence Length = 193973 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 tctgccattgaggttgttgctgaga 392 |||||||| |||||||||||||||| Sbjct: 164288 tctgccatagaggttgttgctgaga 164312
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccgctttaaggagctgaatgc 297 ||||||||||||||||||||| Sbjct: 66203 ccgctttaaggagctgaatgc 66223
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gccattgaggttgttgctgagatg 394 ||||||||||||| |||||||||| Sbjct: 1318024 gccattgaggttgctgctgagatg 1318001
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aagagtatgccagaagagtt 201 |||||||||||||||||||| Sbjct: 48196 aagagtatgccagaagagtt 48215
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 2424322 ggtgcaaaaatgatttctgc 2424341
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 2376095 ggtgcaaaaatgatttctgc 2376114
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 2376024 ggtgcaaaaatgatttctgc 2376043
>gb|AY769513.1| Stylonychia lemnae macronuclear development protein 69 (mdp69) mRNA, partial sequence Length = 816 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 512 tttgctgggttccattatgatcttaatttcttgaccatacacgg 555 |||||||| || || ||||| || |||||||||||||| ||||| Sbjct: 617 tttgctggctttcactatgacctaaatttcttgaccatccacgg 660
>gb|AY250707.1| Aotus trivirgatus mitochondrion, partial genome Length = 12771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 12130 tgttattcctgatgggttac 12111
>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 3/8 Length = 347625 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 agggcacagtgtttgctggg 520 |||||||||||||||||||| Sbjct: 80414 agggcacagtgtttgctggg 80433
>gb|AC159255.3| Mus musculus BAC clone RP24-89C11 from chromosome 3, complete sequence Length = 216011 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 atggattcttggggtgcaaa 360 |||||||||||||||||||| Sbjct: 124694 atggattcttggggtgcaaa 124713
>gb|AY646409.1| Bacillus thuringiensis serovar kurstaki 3-hydroxybutyryl-CoA dehydratase mRNA, partial cds Length = 237 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 161 ggtgcaaaaatgatttctgc 180
>emb|AJ489745.1|ANA489745 Aotus nancymaae mitochondrial cytb gene for cytochrome b, isolate M35 Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>emb|AJ489746.1|ANA489746 Aotus nancymaae mitochondrial cytb gene for cytochrome b, isolate M26 Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AC157817.6| Mus musculus chromosome 3, clone RP24-260H22, complete sequence Length = 158744 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccagccacccctaagggacc 225 |||||||||||||||||||| Sbjct: 34808 ccagccacccctaagggacc 34789
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cttgtcaaaggatgcattta 431 |||||||||||||||||||| Sbjct: 11360 cttgtcaaaggatgcattta 11379
>gb|AF289515.1|AF289515 Alouatta belzebul PB 01 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1016 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AF289514.1|AF289514 Alouatta belzebul Ab 689 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1011 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 631 tgttattcctgatgggttac 612
>gb|AF289513.1|AF289513 Alouatta belzebul Ab 1088 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1016 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AF289512.1|AF289512 Alouatta belzebul Ab 1033 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1016 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AF289511.1|AF289511 Alouatta belzebul Ab 1030 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1006 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 626 tgttattcctgatgggttac 607
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aagagtatgccagaagagtt 201 |||||||||||||||||||| Sbjct: 24161958 aagagtatgccagaagagtt 24161977
>gb|AY065906.1| Brachyteles arachnoides isolate X117 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065905.1| Brachyteles arachnoides isolate X116 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065897.1| Alouatta belzebul belzebul isolate X128 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065896.1| Alouatta belzebul belzebul isolate X127 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065895.1| Alouatta belzebul belzebul isolate X126 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065894.1| Alouatta belzebul belzebul isolate X123 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY065892.1| Alouatta belzebul belzebul isolate S106 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AY374356.1| Alouatta belzebul isolate Ab698 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374355.1| Alouatta belzebul isolate Ab662 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1098 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374354.1| Alouatta belzebul isolate Ab655 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374353.1| Alouatta belzebul isolate Ab649 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374352.1| Alouatta belzebul isolate Ab648 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374350.1| Alouatta belzebul isolate Ab622 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374349.1| Alouatta belzebul isolate Ab606 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374348.1| Alouatta belzebul isolate Ab603 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374347.1| Alouatta belzebul isolate Ab601 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374346.1| Alouatta belzebul isolate Ab534 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374345.1| Alouatta belzebul isolate Ab496 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374344.1| Alouatta belzebul isolate Ab1591 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374343.1| Alouatta belzebul isolate Ab1087 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AY374341.1| Alouatta belzebul isolate Ab1001 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1103 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 599 tgttattcctgatgggttac 580
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 2457497 ggtgcaaaaatgatttctgc 2457516
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ggtgcaaaaatgatttctgc 372 |||||||||||||||||||| Sbjct: 2375971 ggtgcaaaaatgatttctgc 2375990
>emb|AL929086.7| Zebrafish DNA sequence from clone CH211-130K1 in linkage group 3, complete sequence Length = 174740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 atggcgatacatgtggagag 254 |||||||||||||||||||| Sbjct: 101686 atggcgatacatgtggagag 101667
>emb|AJ831342.1| Veitchia spiralis partial prk gene for phosphoribulokinase, exons 4-5 Length = 576 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atttacctctttgatgaagg 446 |||||||||||||||||||| Sbjct: 546 atttacctctttgatgaagg 565
>emb|AJ831334.1| Solfia samoensis partial prk gene for phosphoribulokinase, exons 4-5 Length = 592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atttacctctttgatgaagg 446 |||||||||||||||||||| Sbjct: 562 atttacctctttgatgaagg 581
>emb|AJ831228.1| Balaka burretiana partial prk gene for phosphoribulokinase, exons 4-5 Length = 584 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atttacctctttgatgaagg 446 |||||||||||||||||||| Sbjct: 554 atttacctctttgatgaagg 573
>gb|DQ098874.1| Aotus trivirgatus isolate 02 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|DQ098873.1| Aotus trivirgatus isolate 01 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|DQ098872.1| Aotus lemurinus griseimembra isolate 04 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|DQ098871.1| Aotus lemurinus griseimembra isolate 03 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|DQ098870.1| Aotus lemurinus griseimembra isolate 02 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|DQ098869.1| Aotus lemurinus griseimembra isolate 01 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgttattcctgatgggttac 323 |||||||||||||||||||| Sbjct: 636 tgttattcctgatgggttac 617
>gb|AC113952.9| Mus musculus chromosome 3, clone RP24-166J20, complete sequence Length = 157006 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccagccacccctaagggacc 225 |||||||||||||||||||| Sbjct: 141379 ccagccacccctaagggacc 141360 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,159,670 Number of Sequences: 3902068 Number of extensions: 4159670 Number of successful extensions: 73891 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73624 Number of HSP's gapped (non-prelim): 255 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)