ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baalg24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119266 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119208 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119207 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119148 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119147 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119088 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119087 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 119028 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119027 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 118968 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118967 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 118908 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118907 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118848 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118847 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118788 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118787 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118728 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118727 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118668 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118667 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118618 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95890 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95948 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95949 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 96008 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 96068 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 96128 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 96188 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 96248 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96249 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 96308 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96309 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 96368 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96369 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96428 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96429 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96488 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96489 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96538
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119266 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119208 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119207 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119148 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119147 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119088 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119087 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 119028 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119027 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 118968 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118967 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 118908 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118907 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118848 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118847 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118788 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118787 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118728 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118727 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118668 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118667 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118618 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95890 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95948 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95949 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 96008 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 96068 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 96128 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 96188 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 96248 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96249 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 96308 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96309 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 96368 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96369 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96428 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96429 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96488 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96489 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96538
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119215 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119157 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119156 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119097 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119096 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119037 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119036 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 118977 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118976 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 118917 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118916 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 118857 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118856 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118797 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118796 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118737 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118736 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118677 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118676 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118617 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118616 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118567 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95835 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95893 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95894 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 95953 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95954 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 96013 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96014 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 96073 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96074 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 96133 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96134 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 96193 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96194 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 96253 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96254 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 96313 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96314 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96373 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96374 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96433 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96434 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96483
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31508468 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 31508526 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508527 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 31508586 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508587 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 31508646 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508647 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 31508706 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508707 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 31508766 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508767 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 31508826 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508827 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 31508886 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508887 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 31508946 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508947 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 31509006 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509007 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 31509066 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31509067 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 31509116 Score = 644 bits (325), Expect = 0.0 Identities = 332/333 (99%), Gaps = 1/333 (0%) Strand = Plus / Minus Query: 319 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 379 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 439 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 499 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 559 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 619 tcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||||||||||||||||||||||| Sbjct: 11513017 tcggc-ttgagtaacgaaaacattggtgagaat 11512986 Score = 442 bits (223), Expect = e-121 Identities = 230/231 (99%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 27320434 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 335 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 394 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 395 taaaggaggtggggg 409 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatcaccagctaaggccc 375 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 237 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 291 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 84128 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 84070 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84069 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 84010 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84009 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 83950 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83949 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 83890 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83889 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 83830 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83829 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 83770 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83769 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 83710 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83709 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 83650 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83649 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 83590 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83589 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 83530 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83529 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 83480
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119235 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119177 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119176 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119117 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119116 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119057 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119056 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 118997 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118996 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 118937 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118936 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 118877 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118876 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118817 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118816 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118757 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118756 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118697 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118696 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118637 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118636 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118587 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95883 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95941 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95942 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 96001 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96002 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 96061 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96062 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 96121 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96122 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 96181 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96182 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 96241 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96242 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 96301 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96302 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 96361 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96362 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96421 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96422 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96481 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96482 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96531
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14657 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 14715 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14716 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 14775 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14776 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 14835 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14836 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 14895 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14896 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 14955 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14956 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 15015 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15016 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 15075 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15076 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 15135 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15136 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 15195 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15196 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 15255 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 15256 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 15305 Score = 1235 bits (623), Expect = 0.0 Identities = 647/651 (99%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 122932 gcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccagg-atgaagc 122989 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122990 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 123049 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123050 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 123109 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123110 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 123169 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123170 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 123229 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123230 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 123289 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123290 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 123349 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123350 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 123409 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123410 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 123469 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 123529 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123530 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 123579
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141465 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 141523 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141524 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 141583 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141584 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 141643 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141644 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 141703 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141704 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 141763 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141764 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 141823 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141824 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 141883 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141884 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 141943 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141944 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 142003 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142004 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 142063 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142064 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 142113
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9268817 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 9268875 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268876 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 9268935 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268936 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 9268995 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268996 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 9269055 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269056 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 9269115 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269116 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 9269175 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269176 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 9269235 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269236 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 9269295 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269296 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 9269355 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269356 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 9269415 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9269416 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 9269465 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9056731 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 9056789 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056790 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 9056849 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056850 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 9056909 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056910 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 9056969 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056970 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 9057029 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057030 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 9057089 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057090 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 9057149 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 9057209 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 9057269 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 9057329 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9057330 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 9057379 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 9228317 gcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccagg-atgaagc 9228375 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228376 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 9228435 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228436 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 9228495 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228496 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 9228555 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228556 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 9228615 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228616 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 9228675 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228676 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 9228735 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228736 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 9228795 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228796 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 9228855 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228856 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 9228915 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9228916 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 9228965 Score = 1235 bits (623), Expect = 0.0 Identities = 647/651 (99%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 9164906 gcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccagg-atgaagc 9164963 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164964 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 9165023 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165024 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 9165083 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165084 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 9165143 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165144 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 9165203 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165204 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 9165263 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165264 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 9165323 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165324 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 9165383 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165384 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 9165443 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165444 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 9165503 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9165504 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 9165553
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19938802 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 19938860 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938861 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 19938920 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938921 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 19938980 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938981 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 19939040 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939041 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 19939100 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939101 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 19939160 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939161 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 19939220 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939221 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 19939280 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939281 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 19939340 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939341 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 19939400 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19939401 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 19939450 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10387669 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 10387727 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387728 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10387787 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387788 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10387847 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387848 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10387907 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387908 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10387967 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387968 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10388027 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388028 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10388087 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388088 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 10388147 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388148 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 10388207 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388208 atgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 10388267 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10388268 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 10388317 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10276629 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 10276571 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276570 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10276511 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276510 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10276451 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276450 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10276391 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276390 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10276331 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276330 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10276271 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276270 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10276211 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276210 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 10276151 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10276150 gcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaa 10276091 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276090 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 10276031 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10276030 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 10275981 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 475 gatcgagcgcccttgcgctgaagatgaacggggctaagc 513 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagag 345 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31598984 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 31599042 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599043 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 31599102 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599103 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 31599162 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599163 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 31599222 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599223 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 31599282 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599283 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 31599342 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599343 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 31599402 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599403 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 31599462 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599463 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 31599522 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599523 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 31599582 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31599583 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 31599632 Score = 644 bits (325), Expect = 0.0 Identities = 332/333 (99%), Gaps = 1/333 (0%) Strand = Plus / Minus Query: 319 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 379 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 439 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 499 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 559 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 619 tcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||||||||||||||||||||||| Sbjct: 11509780 tcggc-ttgagtaacgaaaacattggtgagaat 11509749 Score = 442 bits (223), Expect = e-121 Identities = 230/231 (99%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 27411757 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 335 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 394 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 395 taaaggaggtggggg 409 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatcaccagctaaggccc 375 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 237 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 291 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 33526300 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 33526358 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526359 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 33526418 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526419 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 33526478 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526479 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 33526538 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526539 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 33526598 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526599 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 33526658 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526659 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 33526718 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526719 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 33526778 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526779 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 33526838 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526839 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 33526898 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 33526899 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 33526948 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 328 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 387 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 388 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 447 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 448 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 508 ctaagcgatctgccgaagctgtgggatgtcaaaat 542 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 475 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 516 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/104 (84%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||| ||||| |||||||||||||| ||| | |||| ||||||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaag-tagggtcgatgaagcgg 1076720 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | | ||||||||| || ||||||||| ||||||| ||| ||||| Sbjct: 1076719 atgtgagaatgtctgc-ttgagtaac-aaaacatcggtaagaat 1076678 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 625 ttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaat 33498147 Score = 50.1 bits (25), Expect = 0.009 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 604 gcggaagcgagaatgtcggct 624 | ||||| |||||||| |||| Sbjct: 1076834 gtggaagtgagaatgttggct 1076814
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 47241 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 47183 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47182 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 47123 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47122 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 47063 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47062 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 47003 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47002 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 46943 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46942 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 46883 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46882 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 46823 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46822 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 46763 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46762 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 46703 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46702 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 46643 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 46642 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 46593
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 71497 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 71555 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71556 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 71615 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71616 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 71675 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71676 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 71735 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71736 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 71795 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71796 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 71855 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71856 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 71915 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71916 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 71975 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71976 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 72035 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72036 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 72095 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 72096 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 72145 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 625 ttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaat 43344
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 269 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 327 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 387 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 447 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 507 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 567 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 627 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 687 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 747 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 807 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 867 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 868 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 917
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 464 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 522 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 582 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 642 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 702 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 762 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 822 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 882 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 942 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 1002 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 1062 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1063 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 1112
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 335 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 393 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 453 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 513 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 573 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 633 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 693 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 753 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 813 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 873 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 933 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 934 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 983
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 85 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 143 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 203 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 263 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 323 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 383 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 443 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 503 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 563 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 623 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 683 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 684 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 733
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 464 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 522 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 582 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 642 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 702 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 762 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 822 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 882 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 942 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 1002 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 1062 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1063 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 1112
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19950078 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 19950136 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950137 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 19950196 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950197 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 19950256 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950257 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 19950316 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950317 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 19950376 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950377 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 19950436 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950437 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 19950496 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950497 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 19950556 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950557 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 19950616 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950617 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 19950676 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19950677 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 19950726 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10393708 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 10393766 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393767 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10393826 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393827 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10393886 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393887 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10393946 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393947 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10394006 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394007 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10394066 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394067 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10394126 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394127 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 10394186 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394187 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 10394246 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394247 atgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 10394306 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10394307 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 10394356 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10282668 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 10282610 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282609 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 10282550 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282549 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 10282490 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282489 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 10282430 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282429 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 10282370 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282369 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 10282310 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282309 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10282250 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282249 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 10282190 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10282189 gcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaa 10282130 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282129 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 10282070 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10282069 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 10282020 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 475 gatcgagcgcccttgcgctgaagatgaacggggctaagc 513 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagag 345 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119209 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119151 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119150 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119091 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119090 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119031 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119030 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 118971 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118970 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 118911 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118910 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 118851 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118850 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118791 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118790 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118731 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118730 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118671 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118670 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118611 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118610 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118561 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95830 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95888 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95889 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 95948 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95949 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 96008 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 96068 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 96128 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 96188 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 96248 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96249 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 96308 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96309 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96368 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96369 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96428 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96429 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96478
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119401 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 119343 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119342 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 119283 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119282 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 119223 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 119163 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 119103 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119102 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 119043 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119042 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 118983 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118982 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 118923 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118922 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 118863 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118862 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 118803 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118802 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 118753 Score = 1259 bits (635), Expect = 0.0 Identities = 649/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95493 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 95551 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95552 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 95611 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95612 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 95671 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95672 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 95731 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95732 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 95791 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95792 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 95851 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95852 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 95911 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95912 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 95971 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95972 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 96031 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96032 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 96091 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96092 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 96141
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118182 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 118124 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118123 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 118064 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118063 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 118004 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118003 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 117944 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117943 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 117884 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117883 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 117824 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117823 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 117764 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117763 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 117704 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117703 gcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaa 117644 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117643 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 117584 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117583 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 117534
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 94061 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 94119 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94120 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 94179 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94180 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 94239 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94240 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 94299 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94300 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 94359 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94360 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 94419 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94420 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 94479 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94480 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 94539 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94540 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 94599 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94600 atgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 94659 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 94660 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 94709
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20892 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 20950 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20951 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 21010 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21011 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 21070 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21071 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 21130 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21131 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 21190 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21191 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 21250 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21251 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 21310 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21311 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 21370 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21371 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 21430 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 21431 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 21490 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 21491 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 21540 Score = 1229 bits (620), Expect = 0.0 Identities = 647/652 (99%), Gaps = 3/652 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 44226 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 44168 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44167 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 44108 Query: 121 tggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 179 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 44107 tggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgtt 44048 Query: 180 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44047 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 43988 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43987 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 43928 Query: 300 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43927 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 43868 Query: 360 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43867 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 43808 Query: 420 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43807 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 43748 Query: 480 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43747 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 43688 Query: 540 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 599 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 43687 aatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcga 43628 Query: 600 cgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 43627 cgaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 43577
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 57954 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 57896 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57895 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 57836 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57835 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 57776 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57775 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 57716 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57715 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 57656 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57655 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 57596 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57595 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 57536 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57535 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 57476 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 57475 gcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaa 57416 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57415 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 57356 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 57355 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 57306
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 855 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 797 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 737 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 677 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 617 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 557 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 497 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 437 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 377 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 317 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 316 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 257 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 256 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 207
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 28125 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 28183 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28184 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 28243 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28244 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 28303 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28304 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 28363 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28364 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 28423 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28424 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 28483 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28484 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 28543 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28544 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 28603 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28604 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 28663 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28664 atgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 28723 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 28724 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 28773
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9241464 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 9241406 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241405 ttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttg 9241346 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241345 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 9241286 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241285 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 9241226 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241225 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 9241166 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241165 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 9241106 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241105 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 9241046 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241045 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 9240986 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240985 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 9240926 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240925 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 9240866 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9240865 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 9240816 Score = 188 bits (95), Expect = 2e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 209 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 268 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 269 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 328 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 329 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 374 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 416 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 417 acagccaggaggtttgcctagaagcagccaccctttaaagag 458 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 524 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 570 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagct 527 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 362 accagctaaggcccctaaatgaccgctcagtgataaagga 401 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123065 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 123007 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123006 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 122947 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122946 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 122887 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122886 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 122827 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122826 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 122767 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122766 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 122707 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122706 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 122647 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122646 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 122587 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122586 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 122527 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122526 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 122467 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122466 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 122417 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99772 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 99830 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99831 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 99890 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99891 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 99950 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99951 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 100010 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100011 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 100070 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100071 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 100130 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100131 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 100190 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100191 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 100250 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100251 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 100310 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100311 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 100370 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 100371 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 100420
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52677 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 52619 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52618 ttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttg 52559 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52558 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 52499 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52498 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 52439 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52438 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 52379 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52378 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 52319 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52318 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 52259 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52258 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 52199 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52198 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 52139 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52138 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 52079 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 52078 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 52029
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 87 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 145 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 205 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 265 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 325 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 385 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 445 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 505 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 565 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 625 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 626 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgac 685 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 686 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 735
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123782 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 123724 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123723 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 123664 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123663 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 123604 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123603 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 123544 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123543 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 123484 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123483 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 123424 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123423 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 123364 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123363 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 123304 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 123244 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123243 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 123184 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123183 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 123134 Score = 1251 bits (631), Expect = 0.0 Identities = 648/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 100449 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 100507 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100508 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 100567 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100568 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 100627 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100628 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 100687 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100688 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 100747 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100748 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 100807 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100808 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 100867 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100868 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 100927 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100928 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 100987 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100988 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 101047 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 101048 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 101097
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1249 bits (630), Expect = 0.0 Identities = 644/646 (99%), Gaps = 2/646 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 466 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 524 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 584 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 644 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 704 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 764 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 824 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 884 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 944 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 1004 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 1064 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtg 646 ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1065 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtg 1109
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1243 bits (627), Expect = 0.0 Identities = 647/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 463 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 521 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 ttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 581 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 641 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 701 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 761 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 821 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 822 caccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacag 881 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 941 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 1001 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 1061 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1062 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 1111
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1187 bits (599), Expect = 0.0 Identities = 642/651 (98%), Gaps = 4/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123005 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 122947 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122946 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 122887 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122886 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 122827 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122826 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcga 122768 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122767 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 122708 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122707 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 122648 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122647 caccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 122588 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122587 ccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctg 122529 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122528 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 122469 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122468 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 122409 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122408 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 122359 Score = 1187 bits (599), Expect = 0.0 Identities = 642/651 (98%), Gaps = 4/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99732 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 99790 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99791 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 99850 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99851 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 99910 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99911 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcga 99969 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99970 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 100029 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100030 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 100089 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100090 caccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 100149 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100150 ccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctg 100208 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100209 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 100268 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100269 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 100328 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 100329 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 100378
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1187 bits (599), Expect = 0.0 Identities = 642/651 (98%), Gaps = 4/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6085 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 6143 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6144 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 6203 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6204 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 6263 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 6264 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcga 6322 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6323 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 6382 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6383 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 6442 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6443 caccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 6502 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6503 ccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctg 6561 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6562 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 6621 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6622 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 6681 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6682 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 6731
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1187 bits (599), Expect = 0.0 Identities = 642/651 (98%), Gaps = 4/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 673 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 731 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 791 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 851 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 852 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcga 910 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 970 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 1030 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 caccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 1090 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1091 ccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctg 1149 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 1209 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1210 atgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgac 1269 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1270 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 1319
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1126 bits (568), Expect = 0.0 Identities = 575/576 (99%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 285 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 343 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 403 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 463 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 523 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 583 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 643 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 703 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 763 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 823 Query: 541 atgcatcggtaggggagcgttccgccttagagggaa 576 |||||||||||||||||||||||||||||||||||| Sbjct: 824 atgcatcggtaggggagcgttccgccttagagggaa 859
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1090 bits (550), Expect = 0.0 Identities = 628/651 (96%), Gaps = 6/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127202 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 127144 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127143 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 127084 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127083 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 127024 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 127023 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgaga 126964 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 126963 gcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----caggggtca 126908 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126907 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 126848 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 126847 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 126788 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 126787 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 126728 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126727 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 126668 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||||||||||||||||||||||||||||| ||||| |||| || || ||| Sbjct: 126667 atgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggac 126608 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 126607 gaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 126558 Score = 1090 bits (550), Expect = 0.0 Identities = 628/651 (96%), Gaps = 6/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107720 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 107778 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107779 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 107838 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107839 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 107898 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 107899 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgaga 107958 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107959 gcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----caggggtca 108014 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108015 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 108074 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 108075 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 108134 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 108135 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 108194 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108195 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 108254 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 ||||||||||||||||||||||||||||||||||||||| ||||| |||| || || ||| Sbjct: 108255 atgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggac 108314 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 108315 gaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 108364
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138840 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 138782 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138781 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 138722 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138721 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 138662 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 138661 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 138602 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 138601 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgagg 138542 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138541 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 138482 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 138481 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 138422 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138421 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 138362 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138361 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 138302 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 138301 catcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaa 138242 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 138241 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 138195 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110257 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 110315 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110316 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 110375 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110376 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 110435 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 110436 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 110495 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 110496 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgagg 110555 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110556 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 110615 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 110616 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 110675 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110676 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 110735 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110736 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 110795 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 110796 catcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaa 110855 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 110856 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 110902
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141443 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 141385 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141384 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 141325 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141324 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 141265 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 141264 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 141205 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 141204 gtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaagg 141145 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141144 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 141085 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 141084 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 141025 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141024 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 140965 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140964 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 140905 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||||| Sbjct: 140904 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaa 140845 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 140844 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 140798 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112214 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 112272 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112273 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 112332 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112333 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 112392 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 112393 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 112452 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 112453 gtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaagg 112512 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112513 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 112572 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112573 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 112632 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112633 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 112692 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 112693 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 112752 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||||| Sbjct: 112753 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaa 112812 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 112813 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 112859
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139045 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 138987 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138986 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 138927 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138926 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 138867 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 138866 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 138807 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 138806 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaagg 138747 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138746 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 138687 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 138686 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 138627 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138626 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 138567 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138566 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 138507 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||| Sbjct: 138506 catcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaa 138447 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 138446 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 138400 Score = 1086 bits (548), Expect = 0.0 Identities = 625/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110254 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 110312 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110313 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 110372 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110373 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 110432 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 110433 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 110492 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 110493 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaagg 110552 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110553 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 110612 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 110613 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 110672 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110673 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 110732 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110733 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 110792 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||| Sbjct: 110793 catcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaa 110852 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 110853 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 110899
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131003 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 130945 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130944 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 130885 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130884 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 130825 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 130824 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 130765 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 130764 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 130705 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130704 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 130645 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 130644 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 130585 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130584 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 130525 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130524 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 130465 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 130464 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 130405 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 130404 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 130358 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103632 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 103690 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103691 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 103750 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103751 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 103810 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 103811 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 103870 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 103871 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 103930 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103931 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 103990 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 103991 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 104050 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104051 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 104110 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104111 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 104170 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 104171 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 104230 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 104231 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 104277
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 663 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 721 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 722 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 781 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 841 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 842 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 901 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 902 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaagg 961 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 tcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcac 1021 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1022 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1081 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1082 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1141 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 1201 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| Sbjct: 1202 catcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaa 1261 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1262 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1308
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 132334 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 132276 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132275 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 132216 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132215 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 132156 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 132155 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 132096 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 132095 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaagg 132036 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132035 tcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcac 131976 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 131975 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 131916 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131915 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 131856 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131855 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 131796 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| Sbjct: 131795 catcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaa 131736 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 131735 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 131689 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 104430 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 104488 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104489 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 104548 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104549 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 104608 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104609 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 104668 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 104669 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaagg 104728 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104729 tcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcac 104788 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 104789 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 104848 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104849 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 104908 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104909 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 104968 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| Sbjct: 104969 catcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaa 105028 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105029 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 105075
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 133295 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 133237 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133236 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 133177 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133176 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 133117 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 133116 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 133057 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 133056 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaagg 132997 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132996 tcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcac 132937 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 132936 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 132877 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132876 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 132817 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132816 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 132757 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| Sbjct: 132756 catcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaa 132697 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 132696 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 132650 Score = 1078 bits (544), Expect = 0.0 Identities = 624/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 105354 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 105412 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105413 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 105472 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105473 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 105532 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 105533 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 105592 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 105593 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaagg 105652 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105653 tcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcac 105712 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 105713 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 105772 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105773 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 105832 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105833 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 105892 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| Sbjct: 105893 catcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaa 105952 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105953 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 105999
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1076 bits (543), Expect = 0.0 Identities = 627/651 (96%), Gaps = 3/651 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 133561 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 133503 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133502 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 133443 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133442 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 133383 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 133382 aggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgaga 133323 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 133322 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-tca 133264 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133263 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 133204 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 133203 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 133144 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 133143 ccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcga 133084 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133083 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaa 133024 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||| |||||| ||||| |||| || || ||| Sbjct: 133023 atgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggac 132964 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 132963 gaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 132914 Score = 1076 bits (543), Expect = 0.0 Identities = 627/651 (96%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104410 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 104468 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104469 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 104528 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104529 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 104588 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 104589 aggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgaga 104648 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 104649 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-tca 104707 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104708 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 104767 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 104768 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 104827 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 104828 ccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcga 104887 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104888 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaa 104947 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||| |||||| ||||| |||| || || ||| Sbjct: 104948 atgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggac 105007 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105008 gaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 105057
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132111 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 132053 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132052 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 131993 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131992 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 131933 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 131932 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 131873 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131872 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 131813 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131812 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 131753 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 131752 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 131693 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131692 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 131633 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131632 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 131573 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 131572 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 131513 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 131512 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 131466 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104767 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 104825 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104826 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 104885 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104886 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 104945 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104946 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 105005 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105006 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 105065 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105066 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 105125 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 105126 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 105185 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105186 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 105245 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105246 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 105305 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 105306 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 105365 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105366 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 105412
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135237 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135179 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135178 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135119 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135059 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135058 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134999 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 134998 gtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaagg 134939 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134938 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134879 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134878 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134819 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134818 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134759 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134758 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 134699 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| | ||| ||| | || |||||| Sbjct: 134698 catcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaa 134639 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134638 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134592 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106669 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106727 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106728 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106787 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106847 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106848 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106907 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 106908 gtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaagg 106967 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106968 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107027 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 107028 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 107087 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107088 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107147 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107148 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 107207 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| | ||| ||| | || |||||| Sbjct: 107208 catcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaa 107267 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107268 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107314
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142215 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 142157 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142156 gatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 142097 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 142096 ttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgagg 142037 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 142036 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 141977 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141976 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 141917 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141916 tcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcac 141857 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 141856 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagcca 141797 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141796 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 141737 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141736 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 141677 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 141676 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 141617 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 141616 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 141570 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111113 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 111171 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111172 gatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 111231 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111232 ttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgagg 111291 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 111292 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 111351 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111352 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 111411 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111412 tcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcac 111471 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 111472 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagcca 111531 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111532 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 111591 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111592 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 111651 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 111652 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 111711 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 111712 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 111758
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 661 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 719 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 779 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 839 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 840 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 899 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 900 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaagg 959 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1019 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1020 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagcca 1079 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1080 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1139 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1140 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 1199 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||| ||||||||||||||||||||| ||||||||||||||| ||| |||| |||||| Sbjct: 1200 catccgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaa 1259 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||| |||||| || |||||||||| |||||||||||||||| Sbjct: 1260 gcggaagcgaaaatgtccgc-ttgagtaacgcaaacattggtgagaat 1306
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135928 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135870 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135869 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135810 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135809 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135750 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135749 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 135690 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135689 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 135630 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135629 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135570 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 135569 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 135510 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135509 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 135450 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135449 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 135390 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||| | ||||| ||||| || |||||| Sbjct: 135389 catcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaa 135330 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135329 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 135283 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106497 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106555 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106556 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106615 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106616 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106675 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106676 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106735 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106736 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 106795 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106796 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106855 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106856 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106915 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106916 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106975 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106976 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 107035 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||| | ||||| ||||| || |||||| Sbjct: 107036 catcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaa 107095 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107096 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107142
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135516 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135458 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135457 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135398 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135397 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135338 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135337 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 135278 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 135277 gtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaagg 135218 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135217 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135158 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 135157 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 135098 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135097 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 135038 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135037 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 134978 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| | ||| ||| | || |||||| Sbjct: 134977 catcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaa 134918 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134917 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134871 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106891 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106949 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106950 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 107009 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107010 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 107069 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 107070 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 107129 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 107130 gtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaagg 107189 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107190 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107249 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 107250 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 107309 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107310 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107369 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107370 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 107429 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||||||||||||| | ||| ||| | || |||||| Sbjct: 107430 catcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaa 107489 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107490 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107536
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132104 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 132046 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132045 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 131986 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131985 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 131926 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 131925 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 131866 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131865 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 131806 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131805 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 131746 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 131745 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 131686 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131685 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 131626 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131625 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 131566 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 131565 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 131506 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 131505 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 131459 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104765 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 104823 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104824 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 104883 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104884 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 104943 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104944 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 105003 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105004 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 105063 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105064 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 105123 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 105124 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 105183 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105184 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 105243 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105244 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 105303 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 105304 catcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaa 105363 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105364 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 105410
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1070 bits (540), Expect = 0.0 Identities = 623/648 (96%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 665 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 723 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 783 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 843 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 844 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 903 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 904 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 963 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1023 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1024 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1083 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1084 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1143 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 1144 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagg 1203 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||| |||||||| | ||| ||| | ||| |||||| Sbjct: 1204 catcggtaggggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaa 1263 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1264 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1310
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1065 bits (537), Expect = 0.0 Identities = 626/653 (95%), Gaps = 7/653 (1%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138921 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 138863 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138862 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 138803 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138802 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 138743 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 138742 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 138683 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggt 298 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 138682 gtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggt 138623 Query: 299 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138622 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 138563 Query: 359 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 418 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 138562 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 138503 Query: 419 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 478 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138502 agccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 138443 Query: 479 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 538 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138442 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaa 138383 Query: 539 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcg 598 |||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || | Sbjct: 138382 aaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtgg 138323 Query: 599 acgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 138322 acgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 138271 Score = 1065 bits (537), Expect = 0.0 Identities = 626/653 (95%), Gaps = 7/653 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111024 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 111082 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111083 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 111142 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111143 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 111202 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 111203 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 111262 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggt 298 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 111263 gtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggt 111322 Query: 299 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111323 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 111382 Query: 359 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 418 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 111383 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 111442 Query: 419 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 478 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111443 agccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 111502 Query: 479 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 538 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111503 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaa 111562 Query: 539 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcg 598 |||||||||||||||||||||||||||||||||| |||||| ||||| ||| || || | Sbjct: 111563 aaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtgg 111622 Query: 599 acgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 111623 acgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 111674
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135636 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135578 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135577 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135518 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135517 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135458 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135457 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 135398 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135397 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 135338 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135337 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135278 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 135277 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 135218 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135217 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 135158 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135157 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 135098 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 135097 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 135038 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135037 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134991 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106994 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 107052 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107053 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 107112 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107113 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 107172 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 107173 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 107232 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107233 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 107292 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107293 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107352 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 107353 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 107412 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107413 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107472 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107473 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 107532 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 107533 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 107592 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107593 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107639
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136274 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 136216 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136215 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 136156 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136155 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 136096 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 136095 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 136036 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 136035 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 135976 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135975 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135916 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 135915 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 135856 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135855 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 135796 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135795 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 135736 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||| Sbjct: 135735 catcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaa 135676 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135675 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 135629 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107283 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 107341 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107342 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 107401 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107402 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 107461 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 107462 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 107521 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107522 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 107581 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107582 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107641 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 107642 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 107701 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107702 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107761 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107762 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 107821 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||| Sbjct: 107822 catcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaa 107881 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107882 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107928
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2188 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 2246 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2247 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 2306 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2307 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 2366 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 2367 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 2426 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2427 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 2486 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 2546 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 2547 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 2606 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2607 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 2666 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2667 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 2726 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 2727 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 2786 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 2787 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 2833
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134824 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134823 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134764 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134763 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134704 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134703 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134644 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134643 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 134584 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134583 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134524 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134523 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134464 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134463 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134404 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134403 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 134344 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134343 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134284 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134283 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134237 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106154 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106212 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106272 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106332 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106333 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106392 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106393 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 106452 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106453 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106512 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106513 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106572 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106573 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106632 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106633 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 106692 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 106693 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 106752 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106753 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106799
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135017 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134959 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134958 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134899 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134898 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134839 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134838 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134779 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134778 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 134719 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134718 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134659 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134658 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134599 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134598 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134539 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134538 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 134479 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134478 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134419 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134418 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134372 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106326 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106384 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106385 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106444 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106445 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106504 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106505 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106564 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106565 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 106624 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106625 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106684 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106685 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106744 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106745 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106804 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106805 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 106864 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 106865 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 106924 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106925 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106971
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135015 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134957 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134956 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134897 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134896 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134837 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134836 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134777 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134776 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 134717 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134716 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134657 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134656 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134597 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134596 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134537 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134536 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 134477 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134476 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134417 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134416 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134370 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106323 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106381 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106382 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106441 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106442 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106501 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106502 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106561 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106562 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 106621 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106622 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106681 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106682 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106741 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106742 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106801 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106802 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 106861 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 106862 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 106921 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106922 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106968
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134927 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134869 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134868 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134809 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134808 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134749 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134748 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134689 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134688 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 134629 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134628 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134569 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134568 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134509 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134508 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134449 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134448 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 134389 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134388 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134329 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134328 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134282 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106201 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106259 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106260 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106319 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106320 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106379 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106380 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106439 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106440 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 106499 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106500 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106559 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106560 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106619 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106620 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106679 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106680 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 106739 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 106740 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 106799 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106800 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106846
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135634 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135576 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135575 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135516 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135515 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135456 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135455 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 135396 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135395 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 135336 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135335 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135276 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 135275 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 135216 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135215 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 135156 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135155 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 135096 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 135095 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 135036 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135035 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134989 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106992 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 107050 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107051 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 107110 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107111 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 107170 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 107171 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 107230 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107231 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 107290 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107291 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107350 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 107351 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 107410 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107411 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107470 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107471 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 107530 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 107531 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 107590 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107591 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107637
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135365 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 135307 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135306 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 135247 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135246 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 135187 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 135186 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 135127 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135126 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 135067 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135066 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 135007 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 135006 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 134947 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134946 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134887 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 134886 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 134827 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134826 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134767 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134766 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134720 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106773 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106831 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106832 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106891 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106892 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106951 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106952 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 107011 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107012 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 107071 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107072 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 107131 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 107132 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 107191 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107192 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 107251 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107252 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 107311 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 107312 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 107371 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107372 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 107418
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 1063 bits (536), Expect = 0.0 Identities = 622/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 761 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 819 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 879 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 939 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 940 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 999 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1000 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 1059 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1119 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 1120 cagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcca 1179 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1180 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1239 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1240 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaata 1299 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 1300 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 1359 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1360 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1406
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1055 bits (532), Expect = 0.0 Identities = 621/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134894 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134836 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134835 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134776 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134775 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134716 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134715 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134656 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 134655 gtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaagg 134596 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134595 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 134536 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 134535 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 134476 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134475 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 134416 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134415 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 134356 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 134355 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 134296 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134295 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 134249 Score = 1055 bits (532), Expect = 0.0 Identities = 621/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106168 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106226 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106227 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106286 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106287 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106346 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106347 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106406 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 106407 gtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaagg 106466 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106467 tcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106526 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106527 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106586 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106587 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106646 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106647 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaata 106706 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct: 106707 catcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaa 106766 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106767 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106813
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 1031 bits (520), Expect = 0.0 Identities = 618/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131203 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 131145 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131144 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 131085 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131084 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 131025 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 131024 cgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 130965 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 130964 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaagg 130905 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130904 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 130845 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 130844 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaacca 130785 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130784 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 130725 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 130724 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaag 130665 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||||| Sbjct: 130664 aatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaa 130605 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 130604 gcggaagcgagaatgtcggc-ttgagtaacgcaaacgttggtgagaat 130558 Score = 1031 bits (520), Expect = 0.0 Identities = 618/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104191 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 104249 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104250 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 104309 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104310 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 104369 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104370 cgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 104429 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 104430 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaagg 104489 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104490 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 104549 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 104550 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaacca 104609 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104610 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 104669 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 104670 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaag 104729 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||||| Sbjct: 104730 aatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaa 104789 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 104790 gcggaagcgagaatgtcggc-ttgagtaacgcaaacgttggtgagaat 104836
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 1031 bits (520), Expect = 0.0 Identities = 618/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129866 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 129808 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129807 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 129748 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129747 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 129688 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 129687 cgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 129628 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 129627 gtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaagg 129568 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 129567 tcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcac 129508 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 129507 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 129448 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 129447 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 129388 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 129387 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 129328 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| |||||| Sbjct: 129327 aatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaa 129268 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 129267 gcggaagcgagaatgtcggc-ttgagtaacgcaaacgttggtgagaat 129221 Score = 1031 bits (520), Expect = 0.0 Identities = 618/648 (95%), Gaps = 2/648 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102590 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 102648 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102649 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 102708 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102709 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 102768 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 102769 cgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 102828 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 102829 gtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaagg 102888 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 102889 tcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcac 102948 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 102949 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 103008 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103009 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 103068 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 103069 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 103128 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| |||||| Sbjct: 103129 aatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaa 103188 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 103189 gcggaagcgagaatgtcggc-ttgagtaacgcaaacgttggtgagaat 103235
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1019 bits (514), Expect = 0.0 Identities = 617/648 (95%), Gaps = 10/648 (1%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134320 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 134262 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134261 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 134202 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134201 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 134142 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134141 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 134082 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| || ||| ||||||||| Sbjct: 134081 gtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaagg 134029 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134028 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 133969 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 133968 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 133909 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133908 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 133849 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133848 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 133789 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| ||||||||||||| ||||| ||| || || |||||| Sbjct: 133788 catcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaa 133730 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 133729 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 133683 Score = 1019 bits (514), Expect = 0.0 Identities = 617/648 (95%), Gaps = 10/648 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105962 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106020 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106021 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 106080 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106081 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 106140 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 106141 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 106200 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||| || ||| ||||||||| Sbjct: 106201 gtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaagg 106253 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106254 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 106313 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 106314 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 106373 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106374 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 106433 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106434 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 106493 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| ||||||||||||| ||||| ||| || || |||||| Sbjct: 106494 catcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaa 106552 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106553 gcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 106599
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 1019 bits (514), Expect = 0.0 Identities = 621/650 (95%), Gaps = 5/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2432 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 2490 Query: 64 gatgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtg 122 | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2491 ggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 2550 Query: 123 gttaggggtgaaatg-ccactcgaacccagagctagctggttctccccgaaatgcgttga 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2551 gttaggggtgaaatggccactcgaacccagagctagctggttctccccgaaatgcgttga 2610 Query: 182 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 2611 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagag 2670 Query: 242 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 301 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 2671 cggtaccaaatcgaggcaaactctgaatactagatatgactcaaaa-taacaggggtcaa 2729 Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2730 ggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatc 2789 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2790 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 2849 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 2850 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgag 2909 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2910 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 2969 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||| Sbjct: 2970 tacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacg 3029 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 3030 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 3078
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 995 bits (502), Expect = 0.0 Identities = 551/566 (97%), Gaps = 1/566 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 684 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 742 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 802 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 862 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 863 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 922 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 923 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaagg 982 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1042 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1043 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1102 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1103 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1162 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1163 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 1222 Query: 544 catcggtaggggagcgttccgcctta 569 |||||||||||||||||||||||||| Sbjct: 1223 catcggtaggggagcgttccgcctta 1248
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 985 bits (497), Expect = 0.0 Identities = 614/649 (94%), Gaps = 3/649 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1159 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 1217 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1218 ggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 1277 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1278 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 1337 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 1338 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 1397 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1398 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 1457 Query: 304 tcggccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagcccggatca 362 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1458 tcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatca 1517 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1518 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1577 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1578 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1637 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1638 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaa 1697 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 ||||||||||||||||||||| |||| |||||||| | ||| ||| | ||||| Sbjct: 1698 acatcggtaggggagcgttccgtgttagggggaagcatcggcgcgagccatgccagacga 1757 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1758 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1805
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 963 bits (486), Expect = 0.0 Identities = 616/657 (93%), Gaps = 18/657 (2%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139696 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 139638 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139637 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 139578 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139577 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 139518 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 139517 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 139458 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||| || || |||| |||||||| Sbjct: 139457 gtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaagg 139405 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139404 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 139345 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 139344 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 139285 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139284 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 139225 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gt 536 | ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139224 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagt 139165 Query: 537 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggg 594 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | | Sbjct: 139164 aaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgt 139105 Query: 595 gtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 || |||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 139104 gtggacgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 139049 Score = 963 bits (486), Expect = 0.0 Identities = 616/657 (93%), Gaps = 18/657 (2%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110364 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 110422 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110423 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 110482 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110483 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 110542 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 110543 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 110602 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||| || || |||| |||||||| Sbjct: 110603 gtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaagg 110655 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110656 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 110715 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 110716 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 110775 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110776 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 110835 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gt 536 | ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110836 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagt 110895 Query: 537 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggg 594 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | | Sbjct: 110896 aaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgt 110955 Query: 595 gtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 || |||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 110956 gtggacgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 111011
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 963 bits (486), Expect = 0.0 Identities = 613/650 (94%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 666 attgtcactacttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 724 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 725 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 784 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 844 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 845 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 904 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaa 301 |||||||||||||||||||||||||||||||||||||| || |||||||||||| | || Sbjct: 905 ggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataacaggggataaa 964 Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 965 ggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1024 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 1025 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 1084 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1085 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1144 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1145 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 1204 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1205 tacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacg 1264 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1265 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1313
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 961 bits (485), Expect = 0.0 Identities = 543/561 (96%), Gaps = 1/561 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131127 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 131069 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131068 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 131009 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131008 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 130949 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 130948 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 130889 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 130888 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 130829 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130828 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 130769 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 130768 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 130709 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130708 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 130649 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 130648 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaa 130589 Query: 544 catcggtaggggagcgttccg 564 ||||||||||||||||||||| Sbjct: 130588 catcggtaggggagcgttccg 130568 Score = 961 bits (485), Expect = 0.0 Identities = 543/561 (96%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102318 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 102376 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102377 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 102436 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102437 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 102496 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 102497 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 102556 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 102557 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 102616 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102617 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 102676 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 102677 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 102736 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102737 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 102796 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 102797 ctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaa 102856 Query: 544 catcggtaggggagcgttccg 564 ||||||||||||||||||||| Sbjct: 102857 catcggtaggggagcgttccg 102877 Score = 83.8 bits (42), Expect = 7e-13 Identities = 52/54 (96%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 130482 Score = 83.8 bits (42), Expect = 7e-13 Identities = 52/54 (96%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 102963
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 959 bits (484), Expect = 0.0 Identities = 614/651 (94%), Gaps = 6/651 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacct--gggtgatctatccatgaccaggnatgaagct 61 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 678 attgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg-atgaagct 736 Query: 62 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 121 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 tgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 796 Query: 122 ggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 797 ggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaaatgcgttg 856 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 857 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgaga 916 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 917 gcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataacaagggtca 976 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 977 aggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaacagccctgat 1036 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 1037 cacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacag 1096 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1097 ccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctcactgatcga 1155 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1156 gcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaa 1215 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 | |||||||||||||||||||||| ||||| |||||||| | ||| ||| | ||| ||| Sbjct: 1216 aggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagac 1275 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1276 gaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1325
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 952 bits (480), Expect = 0.0 Identities = 553/576 (96%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 670 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 728 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 788 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 848 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 849 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 908 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 909 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 968 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 969 tcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcac 1028 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1029 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1088 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1089 ggaggtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1148 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1149 ctcttgcgccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaa 1208 Query: 544 catcggtaggggagcgttccgccttagagggaagca 579 ||||||||||||||||||||| |||| |||||||| Sbjct: 1209 catcggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 946 bits (477), Expect = 0.0 Identities = 550/573 (95%), Gaps = 1/573 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 672 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atggagcttg 730 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 790 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 850 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 851 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 910 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 911 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaagg 970 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 tcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1030 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| Sbjct: 1031 cagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagcca 1090 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1091 cgaggtttgcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1150 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1151 ctcttgcgcccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatg 1210 Query: 544 catcggtaggggagcgttccgccttagagggaa 576 |||||||||||||||||||| |||||||||||| Sbjct: 1211 catcggtaggggagcgttcccccttagagggaa 1243
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 946 bits (477), Expect = 0.0 Identities = 556/581 (95%), Gaps = 1/581 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 684 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 742 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 802 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 862 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 863 cgcagcagttgactggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcg 922 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 923 gtaccaaatcgaggcaaactctgaatactaaatatgacctcaaaataacaggggttaagg 982 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcac 1042 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1043 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagcca 1102 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1103 agaggtttgcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcg 1162 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1163 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 1222 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgc 584 |||| ||||||||||||||| ||||| ||||||||| |||| Sbjct: 1223 catccgtaggggagcgttcccccttatagggaagcacccgc 1263
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 946 bits (477), Expect = 0.0 Identities = 484/485 (99%), Gaps = 1/485 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 466 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 524 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 584 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 644 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 704 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 764 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 824 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 884 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 944 Query: 481 gcgcc 485 ||||| Sbjct: 945 gcgcc 949
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 940 bits (474), Expect = 0.0 Identities = 610/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52022 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 51964 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51963 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 51904 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51903 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 51844 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct: 51843 cgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcg 51784 Query: 244 gtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaag 302 |||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||| Sbjct: 51783 gtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaag 51724 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51723 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 51664 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 421 ||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 51663 ccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 51604 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 51603 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 51544 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 51543 cgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaa 51484 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 ||||||||||||||||||||||||||||||||||| | || ||| | ||| |||| Sbjct: 51483 gacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacg 51424 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 51423 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 51375 Score = 940 bits (474), Expect = 0.0 Identities = 610/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37806 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 37864 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37865 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 37924 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37925 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 37984 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct: 37985 cgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcg 38044 Query: 244 gtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaag 302 |||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||| Sbjct: 38045 gtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaag 38104 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38105 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 38164 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 421 ||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 38165 ccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 38224 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 38225 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 38284 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 38285 cgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaa 38344 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 ||||||||||||||||||||||||||||||||||| | || ||| | ||| |||| Sbjct: 38345 gacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacg 38404 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 38405 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 38453
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 940 bits (474), Expect = 0.0 Identities = 557/582 (95%), Gaps = 2/582 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 645 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 703 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 763 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 823 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 824 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 883 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 884 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 943 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 1003 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 1004 cagctaaggcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagcca 1063 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1064 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1123 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1124 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaa 1183 Query: 544 catcggta-ggggagcgttccgccttagagggaagcaaccgc 584 |||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1184 catccgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 940 bits (474), Expect = 0.0 Identities = 610/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4734 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 4792 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4793 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 4852 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4853 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 4912 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct: 4913 cgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcg 4972 Query: 244 gtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaag 302 |||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||| Sbjct: 4973 gtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaag 5032 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5033 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 5092 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 421 ||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 5093 ccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 5152 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5153 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5212 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 5213 cgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaa 5272 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 ||||||||||||||||||||||||||||||||||| | || ||| | ||| |||| Sbjct: 5273 gacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacg 5332 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 5333 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 5381
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 938 bits (473), Expect = 0.0 Identities = 549/573 (95%), Gaps = 1/573 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 683 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 741 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 801 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 861 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 862 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 921 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 922 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaagg 981 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 982 tcggccagtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatcac 1041 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1042 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 1101 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 1102 agaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagcg 1161 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| || ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1162 ctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatg 1221 Query: 544 catcggtaggggagcgttccgccttagagggaa 576 |||| ||||||||||||||| ||||| |||||| Sbjct: 1222 catccgtaggggagcgttcccccttaaagggaa 1254
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 934 bits (471), Expect = 0.0 Identities = 505/515 (98%), Gaps = 1/515 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122545 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 122487 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122486 ttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttg 122427 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122426 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 122367 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122366 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 122307 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 122306 gcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattca 122247 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 122246 aagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggat 122187 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122186 caccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacag 122127 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122126 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcga 122067 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcga 515 ||||||||||||||||||||||||||||||||||| Sbjct: 122066 gcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 934 bits (471), Expect = 0.0 Identities = 505/515 (98%), Gaps = 1/515 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12825086 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 12825028 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12825027 ttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttg 12824968 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824967 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 12824908 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824907 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 12824848 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 12824847 gcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattca 12824788 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12824787 aagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggat 12824728 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12824727 caccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacag 12824668 Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12824667 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcga 12824608 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcga 515 ||||||||||||||||||||||||||||||||||| Sbjct: 12824607 gcgcccttgcgctgaagatgaacggggctaagcga 12824573
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 932 bits (470), Expect = 0.0 Identities = 609/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 117483 attgtcactacttatggacccgaacctgggtgatctaaccatgaccagg-atgaagcttg 117425 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 117424 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 117365 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117364 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 117305 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 117304 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 117245 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa- 301 |||||||||||||||||||||||||||||||||||||| || |||||| ||||| || Sbjct: 117244 ggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaat 117185 Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 117184 ggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 117125 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 ||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 117124 accagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 117065 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 117064 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 117005 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 117004 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 116945 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 116944 tacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacg 116885 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 116884 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 116836 Score = 932 bits (470), Expect = 0.0 Identities = 609/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 90619 attgtcactacttatggacccgaacctgggtgatctaaccatgaccagg-atgaagcttg 90677 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 90678 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 90737 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90738 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 90797 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 90798 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 90857 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa- 301 |||||||||||||||||||||||||||||||||||||| || |||||| ||||| || Sbjct: 90858 ggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaat 90917 Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 90918 ggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 90977 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 ||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 90978 accagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 91037 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 91038 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 91097 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 91098 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 91157 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 91158 tacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacg 91217 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 91218 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 91266
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 920 bits (464), Expect = 0.0 Identities = 610/655 (93%), Gaps = 9/655 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 663 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttt 721 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 781 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 841 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct: 842 cgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcg 901 Query: 244 gtaccaaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaag 302 |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||| Sbjct: 902 gtaccaaatcgaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaag 961 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 962 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 1021 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 1022 ccagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagcc 1081 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct: 1082 aggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagc 1141 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------t 536 || ||||||| |||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1142 gctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaat 1201 Query: 537 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 596 ||||| ||||||||||||||||||||||||||||||||||| | || ||| | ||| Sbjct: 1202 aaaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggt 1261 Query: 597 cgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| ||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1262 ggacgaaacggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1315
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 916 bits (462), Expect = 0.0 Identities = 607/650 (93%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 666 attgtcactacttatggacccgaacctgggtgatctatccatgaccagg-atgaagctcg 724 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 725 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 784 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 844 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 845 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 904 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 302 |||||||||||||||||||||||||||||||||||||| | |||||| |||| ||| Sbjct: 905 ggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacgggggataag 964 Query: 303 g-tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 | || ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 965 ggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatc 1024 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 1025 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 1084 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1085 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1144 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1145 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 1204 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 ||||||||||||||||||||||||||| |||||||| | ||| ||| || || |||| Sbjct: 1205 aacatcggtaggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacg 1264 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1265 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1313
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 910 bits (459), Expect = 0.0 Identities = 606/649 (93%), Gaps = 7/649 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86929 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 86987 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86988 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 87047 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87048 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 87107 Query: 184 cgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||| Sbjct: 87108 cgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagc 87167 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 302 |||||||||||||||||||||||||||||||||| || ||| ||||| |||||| | | Sbjct: 87168 ggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagg 87223 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 87224 gtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatca 87283 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 87284 ccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagcc 87343 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 87344 aggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagc 87403 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87404 gctcttgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaat 87463 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 |||||||||||||||||||||||| |||| |||||| | ||| ||| || || ||||| Sbjct: 87464 acatcggtaggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacga 87523 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 87524 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 87571
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 904 bits (456), Expect = 0.0 Identities = 549/579 (94%), Gaps = 7/579 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 684 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 742 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 802 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 862 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 863 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagca 922 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 923 gtaccaaatcgaggcaaactctgaatactagatatgacc------tcacaggggttaagg 976 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 977 tcggccaatgagacgatgggggataagcttcatcttccagagggaaacagcccggatcac 1036 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1037 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagcca 1096 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1097 cgaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 1156 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| || |||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1157 ctcttgcgcccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatg 1216 Query: 544 catcggtaggggagcgttccgccttagagggaagcaacc 582 ||||||||||||||||||||||| || |||||| ||||| Sbjct: 1217 catcggtaggggagcgttccgccctaaagggaaacaacc 1255
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 884 bits (446), Expect = 0.0 Identities = 608/655 (92%), Gaps = 9/655 (1%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145893 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 145835 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 145834 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 145775 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 145774 ttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgagg 145715 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 145714 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 145655 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-g 296 |||||||||||||||||||||||||||||||| ||||| |||| ||| |||||| | Sbjct: 145654 ggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggag 145595 Query: 297 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 356 || |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 145594 gtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagccc 145535 Query: 357 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 416 |||||||||||||||||||||||||||||||||||| | |||||||| || ||||| || Sbjct: 145534 agatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagag 145475 Query: 417 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 476 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145474 acagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactga 145415 Query: 477 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 536 || ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 145414 tcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgt 145355 Query: 537 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 596 ||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 145354 caaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgt 145295 Query: 597 cgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 145294 ggacaaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 145241 Score = 884 bits (446), Expect = 0.0 Identities = 608/655 (92%), Gaps = 9/655 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112569 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 112627 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112628 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 112687 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112688 ttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgagg 112747 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 112748 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 112807 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-g 296 |||||||||||||||||||||||||||||||| ||||| |||| ||| |||||| | Sbjct: 112808 ggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggag 112867 Query: 297 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 356 || |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 112868 gtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagccc 112927 Query: 357 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 416 |||||||||||||||||||||||||||||||||||| | |||||||| || ||||| || Sbjct: 112928 agatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagag 112987 Query: 417 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 476 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112988 acagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactga 113047 Query: 477 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 536 || ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 113048 tcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgt 113107 Query: 537 caaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggt 596 ||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || Sbjct: 113108 caaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgt 113167 Query: 597 cgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 113168 ggacaaagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 113221
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 876 bits (442), Expect = 0.0 Identities = 602/649 (92%), Gaps = 6/649 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89015 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 89073 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89074 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 89133 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89134 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 89193 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| Sbjct: 89194 cgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccacgagagc 89253 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 302 |||||||||||||||||||||||||||||||||| |||| || | || ||||| | | Sbjct: 89254 ggtaccaaatcgaggcaaactctgaatactagatt--accccaataaaag-ggggtaagg 89310 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 89311 gtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatca 89370 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 89371 ccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagcc 89430 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 89431 aggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagc 89490 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || | ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 89491 gctcgtgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaat 89550 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 |||||||||||||||||||||||| ||||||||||| | ||| ||| || || ||||| Sbjct: 89551 acatcggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacga 89610 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 89611 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 89658
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 868 bits (438), Expect = 0.0 Identities = 509/532 (95%), Gaps = 8/532 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 149 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 207 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 267 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 327 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 328 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 387 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||| || || |||| |||||||| Sbjct: 388 gtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaagg 440 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 500 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 501 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 560 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 561 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 620 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 535 | ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 866 bits (437), Expect = 0.0 Identities = 528/553 (95%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177508 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 177566 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 177567 ggtgaaactaagtggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtgg 177625 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 177626 ttaggggtgaaatgccactcgcacccagagctagctggttctccccgaaatgcgttgagg 177685 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 177686 cgcagcagttgactggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcg 177745 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt-caag 302 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 177746 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataagaggggggcaag 177805 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 177806 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatca 177865 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 177866 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 177925 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 177926 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 177985 Query: 483 gcccttgcgctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaa 541 || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 177986 gctcttgcgccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaa 178045 Query: 542 tgcatcggtaggg 554 | |||||| |||| Sbjct: 178046 tacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 aggcccctaaatgaccgctcag 391 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 852 bits (430), Expect = 0.0 Identities = 599/650 (92%), Gaps = 4/650 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 670 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 728 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 729 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 788 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 848 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 849 cgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 908 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaa 301 |||||||||||||||||||||||||||||| |||| ||| | ||||| || | || | Sbjct: 909 ggtaccaaatcgaggcaaactctgaatactggataggactccctaataatagagagtaag 968 Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 969 ggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 1028 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 ||| ||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 1029 accggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 1088 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| || Sbjct: 1089 caggaggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaag 1148 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 1149 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 1208 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | ||||||||||||||||||||||||||| | |||||| | ||| ||| || || |||| Sbjct: 1209 tacatcggtaggggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacg 1268 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1269 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1317
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 833 bits (420), Expect = 0.0 Identities = 494/518 (95%), Gaps = 8/518 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 165 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 223 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 283 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ttaggggtgaaatgccgctcgaacccagagctagctggttctccccgaaatgcgttgagg 343 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 344 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 403 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||| || || |||| |||||||| Sbjct: 404 gtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaagg 456 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 516 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 517 cagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcca 576 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 577 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcg 636 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgcc 521 | ||||||| |||||||||||||||||||||||||||| Sbjct: 637 ctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 795 bits (401), Expect = 0.0 Identities = 590/649 (90%), Gaps = 3/649 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127775 attgtcactgctcatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 127717 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127716 ggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 127657 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127656 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 127597 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||||||||| |||| | |||||||||||||||||||||||||||||||||| ||| Sbjct: 127596 cgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagc 127537 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 302 |||||||||||||||||||||||||||||||| |||||||| || ||| ||| | | Sbjct: 127536 ggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagg 127477 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| Sbjct: 127476 gtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatca 127417 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 |||||||||||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 127416 ccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagcc 127357 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 127356 aggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagc 127297 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| Sbjct: 127296 gctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaagg 127237 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 ||||||||||||||||||||| | ||| |||||| ||| ||| || || ||||| Sbjct: 127236 acatcggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacga 127177 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 127176 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 127129 Score = 795 bits (401), Expect = 0.0 Identities = 590/649 (90%), Gaps = 3/649 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95672 attgtcactgctcatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 95730 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 95731 ggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 95790 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95791 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 95850 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||||||||| |||| | |||||||||||||||||||||||||||||||||| ||| Sbjct: 95851 cgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagc 95910 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 302 |||||||||||||||||||||||||||||||| |||||||| || ||| ||| | | Sbjct: 95911 ggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagg 95970 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| Sbjct: 95971 gtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatca 96030 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 |||||||||||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 96031 ccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagcc 96090 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 96091 aggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagc 96150 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| Sbjct: 96151 gctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaagg 96210 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 ||||||||||||||||||||| | ||| |||||| ||| ||| || || ||||| Sbjct: 96211 acatcggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacga 96270 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 96271 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 96318
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 789 bits (398), Expect = 0.0 Identities = 408/410 (99%), Gaps = 1/410 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 576 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 634 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 694 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 754 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 814 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 874 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 934 Query: 361 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 410 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 935 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 781 bits (394), Expect = 0.0 Identities = 404/406 (99%), Gaps = 1/406 (0%) Strand = Plus / Minus Query: 246 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 306 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 366 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 426 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 486 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 546 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 605 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 606 ggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 115
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 755 bits (381), Expect = 0.0 Identities = 388/389 (99%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 461 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 519 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 579 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 639 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 699 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 759 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 819 Query: 361 caccagctaaggcccctaaatgaccgctc 389 ||||||||||||||||||||||||||||| Sbjct: 820 caccagctaaggcccctaaatgaccgctc 848
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 753 bits (380), Expect = 0.0 Identities = 387/388 (99%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 264 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 324 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 384 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 444 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 504 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 564 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 624 tttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||||| Sbjct: 361 -ttgagtaacgaaaacattggtgagaat 387
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 728 bits (367), Expect = 0.0 Identities = 374/375 (99%), Gaps = 1/375 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 669 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 727 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 787 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 847 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 907 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 908 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 967 Query: 301 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 1027 Query: 361 caccagctaaggccc 375 ||||||||||||||| Sbjct: 1028 caccagctaaggccc 1042
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 678 bits (342), Expect = 0.0 Identities = 533/594 (89%), Gaps = 2/594 (0%) Strand = Plus / Minus Query: 58 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 117 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 3103 agcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcagcggatgag 3044 Query: 118 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 177 |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 3043 ttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccctgaaatgca 2985 Query: 178 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 237 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 2984 ttgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgcgggcaatg 2925 Query: 238 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 297 |||| ||||||||| ||||||||||||||||| |||||| || | ||||| ||| ||| Sbjct: 2924 agagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaatcacaaggg 2865 Query: 298 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 357 ||||||||||| |||||||||| | |||||||||||||||||||||||||||||| || | Sbjct: 2864 tcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaaacaacctg 2805 Query: 358 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 417 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2804 gatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaaga 2745 Query: 418 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 477 ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| || Sbjct: 2744 cagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaat 2685 Query: 478 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 537 ||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 2684 cgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctatgggatgtc 2625 Query: 538 aaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc 597 ||||||||||| |||||||||||||||||||||||||||||| | || || | ||| Sbjct: 2624 aaaatgcatcgataggggagcgttccgccttagagggaagcacctgcacgagtagtggtg 2565 Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 || || ||||||||| ||||||||||||| ||| | |||||||||||||||| Sbjct: 2564 gaagaggcggaagcgggaatgtcggcttt-tttaaggcaaacattggtgagaat 2512 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 tcactgcttatggacccgaacct 30 ||||||||||||||||||||||| Sbjct: 3142 tcactgcttatggacccgaacct 3120
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 670 bits (338), Expect = 0.0 Identities = 580/654 (88%), Gaps = 10/654 (1%) Strand = Plus / Minus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 138600 tgtcgctgcttatggacccgaacccgggtgatctatccatgaccagg-atgaagcttgga 138542 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 138541 tagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggtt 138482 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138481 aggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcg 138422 Query: 186 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 244 |||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| | Sbjct: 138421 cagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcag 138362 Query: 245 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaag 302 ||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||| Sbjct: 138361 taccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaag 138302 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 138301 gtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatca 138242 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 138241 ccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 138182 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 138181 gggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagc 138122 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaa 540 || | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | | Sbjct: 138121 gctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaaca 138062 Query: 541 atgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtc 597 || |||||||||||||||||||||||| |||||||||| | ||| ||| || | Sbjct: 138061 atacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcg 138002 Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||| ||||||| |||||||||| |||||||||||||||| Sbjct: 138001 gacgaagcggaagcgagagtgtcggc-ttgagtaacgcaaacattggtgagaat 137949 Score = 670 bits (338), Expect = 0.0 Identities = 580/654 (88%), Gaps = 10/654 (1%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 83277 tgtcgctgcttatggacccgaacccgggtgatctatccatgaccagg-atgaagcttgga 83335 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 83336 tagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggtt 83395 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83396 aggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcg 83455 Query: 186 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 244 |||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| | Sbjct: 83456 cagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcag 83515 Query: 245 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaag 302 ||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||| Sbjct: 83516 taccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaag 83575 Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 83576 gtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatca 83635 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 83636 ccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 83695 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 83696 gggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagc 83755 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaa 540 || | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | | Sbjct: 83756 gctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaaca 83815 Query: 541 atgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggtc 597 || |||||||||||||||||||||||| |||||||||| | ||| ||| || | Sbjct: 83816 atacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcg 83875 Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||| ||||||| |||||||||| |||||||||||||||| Sbjct: 83876 gacgaagcggaagcgagagtgtcggc-ttgagtaacgcaaacattggtgagaat 83928
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 666 bits (336), Expect = 0.0 Identities = 403/424 (95%), Gaps = 1/424 (0%) Strand = Plus / Plus Query: 197 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 256 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 257 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 316 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 317 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 377 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 436 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 437 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 496 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 497 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 556 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 557 gcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaa 616 |||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||| Sbjct: 676 gcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaa 735 Query: 617 tgtc 620 |||| Sbjct: 736 tgtc 739 Score = 309 bits (156), Expect = 6e-81 Identities = 172/176 (97%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 124 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 182 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 242 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 644 bits (325), Expect = 0.0 Identities = 332/333 (99%), Gaps = 1/333 (0%) Strand = Plus / Minus Query: 319 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 379 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 439 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 499 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 559 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 619 tcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||||||||||||||||||||||| Sbjct: 63589 tcggc-ttgagtaacgaaaacattggtgagaat 63558
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 642 bits (324), Expect = 0.0 Identities = 508/566 (89%), Gaps = 10/566 (1%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 ||||| ||||||||||||||||| ||||||||||| ||||||||| | ||||| |||| Sbjct: 671 tgtcattgcttatggacccgaacttgggtgatctaaccatgaccaag-atgaaatttggt 729 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 tgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 789 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| || |||||| |||||| ||||||||||||||||||||| ||||| Sbjct: 790 aggggtgaaatgccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcg 849 Query: 186 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 245 ||| |||| || ||||||||||||||||||||||||||||| |||| ||| |||| || Sbjct: 850 cagaagtt-accagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgt 908 Query: 246 accaaatcgaggcaaactctgaatactagatatgacc--caaaaataacaggggtcaagg 303 ||||||| |||||||||| |||||||||||||||||| |||||||||||||| | |||| Sbjct: 909 accaaattgaggcaaactatgaatactagatatgacctccaaaaataacagggataaagg 968 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 | | |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 969 tggaccagtgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcac 1028 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||| ||| Sbjct: 1029 cagctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaacca 1088 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1089 ggaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcg 1148 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||| ||||| ||| ||||||| | |||||||||||||||||| | Sbjct: 1149 ctcttgcgccgaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa----- 1203 Query: 544 catcggtaggggagcgttccgcctta 569 |||||||||||||||||| |||||| Sbjct: 1204 -atcggtaggggagcgttctgcctta 1228 Score = 61.9 bits (31), Expect = 2e-06 Identities = 47/51 (92%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| |||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 1319
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 634 bits (320), Expect = e-179 Identities = 327/328 (99%), Gaps = 1/328 (0%) Strand = Plus / Plus Query: 324 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 384 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 444 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 504 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 564 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 624 tttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||||||| Sbjct: 301 -ttgagtaacgaaaacattggtgagaat 327
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 605 bits (305), Expect = e-170 Identities = 312/313 (99%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 312 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 254 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 194 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 134 Query: 181 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 74 Query: 241 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 14 Query: 301 aggtcggccagtg 313 ||||||||||||| Sbjct: 13 aggtcggccagtg 1
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 597 bits (301), Expect = e-167 Identities = 359/377 (95%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 275 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 334 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 335 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 394 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 395 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 454 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 455 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 515 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 575 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagtaacg 634 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc-ttgagtaacg 282 Query: 635 aaaacattggtgagaat 651 ||||||||||||||||| Sbjct: 281 aaaacattggtgagaat 265
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 585 bits (295), Expect = e-164 Identities = 332/343 (96%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 364847 attgtcactgcttatggacccgaacctgggtgatctatctatgaccagg-atgaagcttg 364905 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 364906 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 364965 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364966 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 365025 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 365026 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 365085 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 365086 gtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaagg 365145 Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagg 346 ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365146 tcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 2e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 341 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 400 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 401 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 459 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 460 gcgtaatagctcactg 475 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 575 bits (290), Expect = e-161 Identities = 321/330 (97%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46921 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 46979 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46980 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 47039 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47040 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 47099 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 47100 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 47159 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 303 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 47160 gtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaagg 47219 Query: 304 tcggccagtgagacgatgggggataagctt 333 |||||||||||||||||||||||||||||| Sbjct: 47220 tcggccagtgagacgatgggggataagctt 47249
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 710 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 770 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 771 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 830 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1184 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1185 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1244 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1245 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1285
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 529 bits (267), Expect = e-147 Identities = 552/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 521 bits (263), Expect = e-145 Identities = 551/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 521 bits (263), Expect = e-145 Identities = 551/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 710 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 711 taagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggt 770 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 771 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 830 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1184 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1185 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1244 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1245 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1285
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 521 bits (263), Expect = e-145 Identities = 551/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagc 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 521 bits (263), Expect = e-145 Identities = 552/642 (85%), Gaps = 11/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-g 830 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1184 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1185 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaa 1244 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1245 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1285
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 519 bits (262), Expect = e-144 Identities = 336/358 (93%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 295 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 353 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 354 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 413 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 414 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 473 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 474 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 533 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 534 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 593 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 594 ggtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 5801 Score = 452 bits (228), Expect = e-124 Identities = 268/280 (95%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 5162 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagttta 5220 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5221 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 5280 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5281 ttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgagg 5340 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 5341 cgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcg 5400 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgaccc 283 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5401 gtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 519 bits (262), Expect = e-144 Identities = 336/358 (93%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 295 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 353 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 354 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 413 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 414 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 473 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 474 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 533 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 534 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 593 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 594 ggtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 5801 Score = 452 bits (228), Expect = e-124 Identities = 268/280 (95%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 5162 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagttta 5220 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5221 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 5280 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5281 ttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgagg 5340 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 5341 cgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcg 5400 Query: 244 gtaccaaatcgaggcaaactctgaatactagatatgaccc 283 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5401 gtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 550/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| || Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagag 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 509 bits (257), Expect = e-141 Identities = 327/349 (93%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 5529 Score = 458 bits (231), Expect = e-125 Identities = 265/275 (96%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4894 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagctta 4952 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4953 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 5012 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5013 ttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 5072 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 5073 cgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcg 5132 Query: 244 gtaccaaatcgaggcaaactctgaatactagatat 278 ||||||||||||||||||||||||||||||||||| Sbjct: 5133 gtaccaaatcgaggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 509 bits (257), Expect = e-141 Identities = 327/349 (93%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 303 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 363 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 422 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 423 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 483 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 542 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 543 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 602 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 603 agcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 22396 Score = 458 bits (231), Expect = e-125 Identities = 265/275 (96%), Gaps = 1/275 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 23031 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagctta 22973 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22972 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 22913 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22912 ttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 22853 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 22852 cgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcg 22793 Query: 244 gtaccaaatcgaggcaaactctgaatactagatat 278 ||||||||||||||||||||||||||||||||||| Sbjct: 22792 gtaccaaatcgaggcaaactctgaatactagatat 22758
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 505 bits (255), Expect = e-140 Identities = 549/642 (85%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 12 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 71 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 72 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 131 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 132 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 191 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 192 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 | | | || ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tatccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 252 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 309 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 || ||| ||||||||| || || ||| ||||||| ||||||||| | |||||| Sbjct: 1131 tgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcgg 1185 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||| |||||| | ||||||| | || || | ||| || ||||| ||| Sbjct: 1186 caggggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaa 1245 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 gtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1286
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 494 bits (249), Expect = e-136 Identities = 256/257 (99%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 395 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 455 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 515 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 575 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagtaacg 634 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc-ttgagtaacg 239 Query: 635 aaaacattggtgagaat 651 ||||||||||||||||| Sbjct: 240 aaaacattggtgagaat 256
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 480 bits (242), Expect = e-132 Identities = 324/350 (92%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 5206 Score = 470 bits (237), Expect = e-129 Identities = 269/277 (97%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4555 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 4613 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4614 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 4673 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4674 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 4733 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4734 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 4793 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||||| |||| Sbjct: 4794 ggtaccaaatcgaggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 480 bits (242), Expect = e-132 Identities = 324/350 (92%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1316 Score = 470 bits (237), Expect = e-129 Identities = 269/277 (97%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 665 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 723 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 724 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 783 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 843 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 844 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 903 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||||| |||| Sbjct: 904 ggtaccaaatcgaggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 480 bits (242), Expect = e-132 Identities = 324/350 (92%), Gaps = 1/350 (0%) Strand = Plus / Minus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 149929 Score = 480 bits (242), Expect = e-132 Identities = 324/350 (92%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 118737 Score = 470 bits (237), Expect = e-129 Identities = 269/277 (97%), Gaps = 2/277 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150580 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 150522 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 150521 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 150462 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150461 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 150402 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150401 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 150342 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||||| |||| Sbjct: 150341 ggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 470 bits (237), Expect = e-129 Identities = 269/277 (97%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118086 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 118144 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 118145 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 118204 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118205 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 118264 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118265 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 118324 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||||| |||| Sbjct: 118325 ggtaccaaatcgaggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 480 bits (242), Expect = e-132 Identities = 324/350 (92%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1316 Score = 470 bits (237), Expect = e-129 Identities = 269/277 (97%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 665 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 723 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 724 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 783 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 843 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 844 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 903 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||||| |||| Sbjct: 904 ggtaccaaatcgaggcaaactctgaatactaggtatg 940
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 472 bits (238), Expect = e-130 Identities = 306/326 (93%), Gaps = 2/326 (0%) Strand = Plus / Plus Query: 326 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 386 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 445 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 446 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 505 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 506 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 565 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 566 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 625 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||| | Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggc-t 554 Query: 626 tgagtaacgaaaacattggtgagaat 651 ||||||||| |||| ||||||||||| Sbjct: 555 tgagtaacgcaaacgttggtgagaat 580
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 468 bits (236), Expect = e-128 Identities = 265/272 (97%), Gaps = 2/272 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115545 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 115487 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 115486 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 115427 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115426 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 115367 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 115366 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 115307 Query: 243 ggtaccaaatcgaggcaaactctgaatactag 274 |||||||||||||||||||||||||||||||| Sbjct: 115306 ggtaccaaatcgaggcaaactctgaatactag 115275 Score = 468 bits (236), Expect = e-128 Identities = 265/272 (97%), Gaps = 2/272 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86575 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 86633 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86634 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 86693 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86694 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 86753 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 86754 cgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagc 86813 Query: 243 ggtaccaaatcgaggcaaactctgaatactag 274 |||||||||||||||||||||||||||||||| Sbjct: 86814 ggtaccaaatcgaggcaaactctgaatactag 86845 Score = 448 bits (226), Expect = e-122 Identities = 321/350 (91%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 114899 Score = 448 bits (226), Expect = e-122 Identities = 321/350 (91%), Gaps = 2/350 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 87221
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 452 bits (228), Expect = e-124 Identities = 316/344 (91%), Gaps = 1/344 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 145241 Score = 452 bits (228), Expect = e-124 Identities = 316/344 (91%), Gaps = 1/344 (0%) Strand = Plus / Minus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 87610 Score = 424 bits (214), Expect = e-115 Identities = 261/274 (95%), Gaps = 2/274 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 144588 attgtcaccgcttataaacccgaacctgggtgatctatccatgaccagg-atgaagcttg 144646 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 144647 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 144706 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144707 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 144766 Query: 184 cgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||| || |||||||||||||||||| ||| |||||||||||||| |||| Sbjct: 144767 cgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagc 144826 Query: 243 ggtaccaaatcgaggcaaactctgaatactagat 276 |||||||||||||||||||||||||||||||||| Sbjct: 144827 ggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 424 bits (214), Expect = e-115 Identities = 261/274 (95%), Gaps = 2/274 (0%) Strand = Plus / Minus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 88263 attgtcaccgcttataaacccgaacctgggtgatctatccatgaccagg-atgaagcttg 88205 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88204 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 88145 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88144 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 88085 Query: 184 cgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||||||||||||| || |||||||||||||||||| ||| |||||||||||||| |||| Sbjct: 88084 cgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagc 88025 Query: 243 ggtaccaaatcgaggcaaactctgaatactagat 276 |||||||||||||||||||||||||||||||||| Sbjct: 88024 ggtaccaaatcgaggcaaactctgaatactagat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 452 bits (228), Expect = e-124 Identities = 316/344 (91%), Gaps = 1/344 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1255 aagcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1297 Score = 450 bits (227), Expect = e-123 Identities = 265/275 (96%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 652 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 710 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 711 ggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgg 770 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 830 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 831 cgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagc 890 Query: 243 ggtaccaaatcgaggcaaactctgaatactagata 277 |||||||||||||||||||||||||||||| |||| Sbjct: 891 ggtaccaaatcgaggcaaactctgaatactggata 925
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 442 bits (223), Expect = e-121 Identities = 230/231 (99%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 541 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 601 gaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggc-ttgagtaacgaaaacattggtgagaat 20641
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 416 bits (210), Expect = e-113 Identities = 235/242 (97%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 193 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 251 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 311 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 371 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 372 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcg 431 Query: 244 gt 245 || Sbjct: 432 gt 433
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 315/350 (90%), Gaps = 1/350 (0%) Strand = Plus / Minus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 541 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 542 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 601 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 5254 Score = 377 bits (190), Expect = e-101 Identities = 260/278 (93%), Gaps = 4/278 (1%) Strand = Plus / Minus Query: 4 attgtcactgctt-atggacccgaacctgggtgatctatccatgaccaggnatgaagctt 62 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5882 attgtcactgctttatggacccgaacctgggtgatctatccatgaccagg-atgaagct- 5825 Query: 63 ggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 122 ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 5824 ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtg 5765 Query: 123 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5764 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 5705 Query: 183 gcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgag 241 |||||||||||||||||| | ||||||||||||||||||||||||| ||| | | || Sbjct: 5704 gcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaag 5645 Query: 242 cggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||| | ||||||||||||| ||||||||||||||| Sbjct: 5644 cggtacgacatcgaggcaaactatgaatactagatatg 5607
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 404 bits (204), Expect = e-109 Identities = 313/347 (90%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 544 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1298 Score = 347 bits (175), Expect = 3e-92 Identities = 252/275 (91%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 663 gcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atgaagc 721 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 722 ttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 781 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 782 tggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttg 841 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 842 aggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaa 901 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||||||||||||||||||||| Sbjct: 902 agcggtaccaaatcgaggcaaactctgaatactag 936
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 400 bits (202), Expect = e-108 Identities = 312/347 (89%), Gaps = 5/347 (1%) Strand = Plus / Plus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 544 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1257 Score = 333 bits (168), Expect = 4e-88 Identities = 250/275 (90%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| Sbjct: 623 tgtcactgtttatagacccgaacccgggtgatctatccatggccaggg-tgaaacttggg 681 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 |||| | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 682 tgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 741 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 742 aggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcg 801 Query: 186 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 244 |||| |||| ||||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 802 cagcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcgg 861 Query: 245 taccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||||||||||||||||| |||| Sbjct: 862 taccaaatcgaggcaaactctgaatactaggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 398 bits (201), Expect = e-108 Identities = 316/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 539 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 540 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 599 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 600 cgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1296 Score = 365 bits (184), Expect = 1e-97 Identities = 254/275 (92%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||| |||||||||||||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 662 gcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccaggg-tgaagc 720 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 721 ttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 780 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 781 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 840 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 841 aggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaa 900 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||||||||||||||||||||| Sbjct: 901 agcggtaccaaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 398 bits (201), Expect = e-108 Identities = 316/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 539 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 540 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 599 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 600 cgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1309 Score = 365 bits (184), Expect = 1e-97 Identities = 254/275 (92%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||| |||||||||||||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 675 gcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccaggg-tgaagc 733 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 734 ttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 793 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 794 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 853 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 854 aggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaa 913 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||||||||||||||||||||| Sbjct: 914 agcggtaccaaatcgaggcaaactctgaatactag 948
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 396 bits (200), Expect = e-107 Identities = 222/228 (97%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 189 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 247 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 307 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 308 ttaggggtgaaatgccactcgaacccagagctagctggctctccccgaaatgcgttgagg 367 Query: 184 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 231 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 cgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 394 bits (199), Expect = e-106 Identities = 250/263 (95%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 389 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 448 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 449 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 508 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 509 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 568 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 569 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttga 628 ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggc-ttga 237 Query: 629 gtaacgaaaacattggtgagaat 651 |||||| |||||||||||||||| Sbjct: 238 gtaacgcaaacattggtgagaat 260
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 391 bits (197), Expect = e-105 Identities = 315/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 302 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 361 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 362 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 421 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 422 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 481 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 482 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 539 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 540 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 599 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 600 cgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1413 Score = 365 bits (184), Expect = 1e-97 Identities = 254/275 (92%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||| |||||||||||||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 779 gcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccaggg-tgaagc 837 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 838 ttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 897 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 898 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 957 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 958 aggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaa 1017 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||||||||||||||||||||| Sbjct: 1018 agcggtaccaaatcgaggcaaactctgaatactag 1052
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 389 bits (196), Expect = e-105 Identities = 311/347 (89%), Gaps = 3/347 (0%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 544 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 123967 Score = 389 bits (196), Expect = e-105 Identities = 311/347 (89%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 544 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 95899 Score = 331 bits (167), Expect = 2e-87 Identities = 250/275 (90%), Gaps = 2/275 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 124602 gcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atgaagc 124544 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 124543 ttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 124484 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 124483 tggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttg 124424 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 124423 aggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaa 124364 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||| ||||||||||||||||| Sbjct: 124363 agcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 331 bits (167), Expect = 2e-87 Identities = 250/275 (90%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 95264 gcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atgaagc 95322 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 95323 ttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 95382 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 95383 tggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttg 95442 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 95443 aggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaa 95502 Query: 240 agcggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||||||| ||||||||||||||||| Sbjct: 95503 agcggtaccaaatcgagtcaaactctgaatactag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 385 bits (194), Expect = e-103 Identities = 309/346 (89%), Gaps = 6/346 (1%) Strand = Plus / Plus Query: 306 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 365 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 366 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 425 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 426 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 485 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 486 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 545 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 546 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 605 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 606 ggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1339 Score = 357 bits (180), Expect = 3e-95 Identities = 254/276 (92%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 ||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 684 tgtcattgcttatgtacccgaacttgggtgatctaaccatgaccagg-atgaaatttggt 742 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 802 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | Sbjct: 803 aggggtgaaatgccaatcgaacccaaagctagctggttctccccgaaatgcgtttagggg 862 Query: 186 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 245 |||||||| || ||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 863 cagcagtt-accggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggt 921 Query: 246 accaaatcgaggcaaactctgaatactagatatgac 281 ||||||| |||||||||| ||||||||||||||||| Sbjct: 922 accaaattgaggcaaactatgaatactagatatgac 957
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 383 bits (193), Expect = e-103 Identities = 200/201 (99%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 451 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 511 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 571 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagt 630 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc-ttgagt 179 Query: 631 aacgaaaacattggtgagaat 651 ||||||||||||||||||||| Sbjct: 180 aacgaaaacattggtgagaat 200
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 381 bits (192), Expect = e-102 Identities = 260/280 (92%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 663 gcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atgaagc 721 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 722 ttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttg 781 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 782 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 841 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 842 aggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcgaa 901 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 902 agcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 287 bits (145), Expect = 2e-74 Identities = 296/345 (85%), Gaps = 1/345 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| ||||||||||| |||| Sbjct: 1251 gaagtgagaatgtcggc-ttgagtaacgcaaacattggtgggaat 1294
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 381 bits (192), Expect = e-102 Identities = 260/280 (92%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 3697 gcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atgaagc 3755 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3756 ttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttg 3815 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 3816 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 3875 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 3876 aggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcgaa 3935 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3936 agcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 303 bits (153), Expect = 4e-79 Identities = 298/345 (86%), Gaps = 1/345 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| ||||||||||| |||| Sbjct: 4285 gaagtgagaatgtcggc-ttgagtaacgcaaacattggtgggaat 4328
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 373 bits (188), Expect = e-100 Identities = 259/280 (92%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 663 gcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atgaagc 721 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| | |||| ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 722 ttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttg 781 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 782 tggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 841 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 842 aggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcgaa 901 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 902 agcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 295 bits (149), Expect = 9e-77 Identities = 298/345 (86%), Gaps = 2/345 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1293
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 369 bits (186), Expect = 8e-99 Identities = 304/342 (88%), Gaps = 1/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 5305 gcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 5345 Score = 305 bits (154), Expect = 1e-79 Identities = 243/270 (90%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 4715 attgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 4773 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 4774 ggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtgg 4833 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 4834 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 4893 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||| || |||| || ||| ||||||||||||||||||||||||||||| || || Sbjct: 4894 cgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagt 4953 Query: 243 ggtaccaaatcgaggcaaactctgaatact 272 |||||||||||||||||||||||||||||| Sbjct: 4954 ggtaccaaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 369 bits (186), Expect = 8e-99 Identities = 304/342 (88%), Gaps = 1/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1272 gcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1312 Score = 305 bits (154), Expect = 1e-79 Identities = 243/270 (90%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 682 attgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 740 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 741 ggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtgg 800 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 801 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 860 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||| || |||| || ||| ||||||||||||||||||||||||||||| || || Sbjct: 861 cgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagt 920 Query: 243 ggtaccaaatcgaggcaaactctgaatact 272 |||||||||||||||||||||||||||||| Sbjct: 921 ggtaccaaatcgaggcaaactctgaatact 950
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 365 bits (184), Expect = 1e-97 Identities = 191/192 (99%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 460 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 520 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 580 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaac 639 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc-ttgagtaacgaaaac 179 Query: 640 attggtgagaat 651 |||||||||||| Sbjct: 180 attggtgagaat 191
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 361 bits (182), Expect = 2e-96 Identities = 303/342 (88%), Gaps = 1/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1267 gcgagaatgtcggc-ttgagtaacggaaacattggtgagaat 1307 Score = 331 bits (167), Expect = 2e-87 Identities = 250/275 (90%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 677 attgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 735 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtgg 795 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 796 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 855 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||| Sbjct: 856 cgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagc 915 Query: 243 ggtaccaaatcgaggcaaactctgaatactagata 277 |||||||||||||| ||||||||||||||| |||| Sbjct: 916 ggtaccaaatcgagacaaactctgaatactggata 950
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 361 bits (182), Expect = 2e-96 Identities = 308/348 (88%), Gaps = 4/348 (1%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 543 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||| |||||||||||| |||||||||| ||||| |||||||||| Sbjct: 1215 gcggaagtgagaatgtcggc-ttgagtaacgcaaacactggtgagaat 1261 Score = 303 bits (153), Expect = 4e-79 Identities = 251/281 (89%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||| |||||||| ||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 625 gcgaatgtcactgtttatggacccgaacccgggtgatctatccatggccagg-atgaagt 683 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| |||||| || ||||||||||||||||| ||||||| || || |||||||| || Sbjct: 684 ttgggtgaaaccaaatggaggtccgaaccgactggtgttgaaaaaccaacggatgagctg 743 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 744 tggataggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttg 803 Query: 181 aggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 804 aggcgcagcggttgactagactatttaggggtaaagcactgtttcggtgcgggctgtgaa 863 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatga 280 | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 864 aacggtaccaaattgatgcaaactctgaatactaaatatga 904
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 361 bits (182), Expect = 2e-96 Identities = 303/342 (88%), Gaps = 1/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1272 gcgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1312 Score = 305 bits (154), Expect = 1e-79 Identities = 243/270 (90%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 682 attgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 740 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 741 ggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtgg 800 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 801 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 860 Query: 184 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 242 ||||||| || |||| || ||| ||||||||||||||||||||||||||||| || || Sbjct: 861 cgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagt 920 Query: 243 ggtaccaaatcgaggcaaactctgaatact 272 |||||||||||||||||||||||||||||| Sbjct: 921 ggtaccaaatcgaggcaaactctgaatact 950
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 272 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 331 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 332 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 391 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 392 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 451 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 452 taaagagtgcgtaatagctca 472 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 272 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 331 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 332 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 391 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 392 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 451 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 452 taaagagtgcgtaatagctca 472 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 328 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 387 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 388 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 447 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 448 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 508 ctaagcgatctgccgaagctgtgggatgtcaaaat 542 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 328 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 387 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 388 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 447 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 448 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 508 ctaagcgatctgccgaagctgtgggatgtcaaaat 542 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 335 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 394 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 395 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 454 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 455 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 514 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 515 atctgccgaagctgtgggat 534 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 331 bits (167), Expect = 2e-87 Identities = 174/175 (99%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75033 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 74975 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74974 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 74915 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 175 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74914 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 331 bits (167), Expect = 2e-87 Identities = 174/175 (99%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382505 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 382563 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382564 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 382623 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 175 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382624 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 331 bits (167), Expect = 2e-87 Identities = 174/175 (99%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113124 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 113066 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113065 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 113006 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 175 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113005 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 331 bits (167), Expect = 2e-87 Identities = 177/179 (98%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367806 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 367748 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367747 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 367688 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367687 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 331 bits (167), Expect = 2e-87 Identities = 177/179 (98%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184411 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagc 184353 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184352 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 184293 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184292 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 416 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gtcgagagggaaacagcccggatc 361 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 319 bits (161), Expect = 6e-84 Identities = 249/276 (90%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1071 tgtcactgtttatggacccgaacccgggtgatctatccatggccaggg-tgaagcttggg 1129 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 |||| | ||| |||| |||||||||||| ||||||| || ||||||||||| ||||||| Sbjct: 1130 tgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggtt 1189 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 1190 aggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcg 1249 Query: 186 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 244 |||| |||||| || | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1250 cagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcgg 1309 Query: 245 taccaaatcgaggcaaactctgaatactagatatga 280 ||||||||||||||||||||||||||||||| |||| Sbjct: 1310 taccaaatcgaggcaaactctgaatactagacatga 1345 Score = 313 bits (158), Expect = 4e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 93.7 bits (47), Expect = 7e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1661 cggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1706
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 315 bits (159), Expect = 1e-82 Identities = 175/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 638 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 696 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 756 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 182 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 315 bits (159), Expect = 1e-82 Identities = 302/348 (86%), Gaps = 5/348 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 543 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggc-ttgagtagcgaaaacattggtgagaat 1298 Score = 295 bits (149), Expect = 9e-77 Identities = 243/272 (89%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||||||| ||| |||||||||| |||||||||| ||||| ||||| ||||||||| | Sbjct: 666 tgtcactgtctatagacccgaacccgggtgatctaaccatggccagg-atgaagctttgg 724 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 ||||||| || || |||||||||||| ||||||||| |||| ||||||||||||||||| Sbjct: 725 tgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtt 784 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 785 aggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcg 844 Query: 186 cagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||| |||| | || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 845 cagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcg 904 Query: 244 gtaccaaatcgaggcaaactctgaatactaga 275 |||||||||||| ||||||||||||||||||| Sbjct: 905 gtaccaaatcgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 315 bits (159), Expect = 1e-82 Identities = 302/348 (86%), Gaps = 5/348 (1%) Strand = Plus / Minus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 543 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggc-ttgagtagcgaaaacattggtgagaat 114364 Score = 315 bits (159), Expect = 1e-82 Identities = 302/348 (86%), Gaps = 5/348 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 543 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggc-ttgagtagcgaaaacattggtgagaat 87624 Score = 295 bits (149), Expect = 9e-77 Identities = 243/272 (89%), Gaps = 3/272 (1%) Strand = Plus / Minus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||||||| ||| |||||||||| |||||||||| ||||| ||||| ||||||||| | Sbjct: 114996 tgtcactgtctatagacccgaacccgggtgatctaaccatggccagg-atgaagctttgg 114938 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 ||||||| || || |||||||||||| ||||||||| |||| ||||||||||||||||| Sbjct: 114937 tgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtt 114878 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 114877 aggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcg 114818 Query: 186 cagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||| |||| | || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 114817 cagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcg 114758 Query: 244 gtaccaaatcgaggcaaactctgaatactaga 275 |||||||||||| ||||||||||||||||||| Sbjct: 114757 gtaccaaatcgatgcaaactctgaatactaga 114726 Score = 295 bits (149), Expect = 9e-77 Identities = 243/272 (89%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||||||| ||| |||||||||| |||||||||| ||||| ||||| ||||||||| | Sbjct: 86992 tgtcactgtctatagacccgaacccgggtgatctaaccatggccagg-atgaagctttgg 87050 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 ||||||| || || |||||||||||| ||||||||| |||| ||||||||||||||||| Sbjct: 87051 tgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtt 87110 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 87111 aggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcg 87170 Query: 186 cagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 |||| |||| | || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 87171 cagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcg 87230 Query: 244 gtaccaaatcgaggcaaactctgaatactaga 275 |||||||||||| ||||||||||||||||||| Sbjct: 87231 gtaccaaatcgatgcaaactctgaatactaga 87262
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 2e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 78 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 137 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 138 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 197 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 198 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 258 caaactctgaatactagatat 278 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 309 bits (156), Expect = 6e-81 Identities = 247/274 (90%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 670 ttgtcactttttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgg 728 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 729 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 788 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 789 taggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggc 848 Query: 185 gcagcagttgac---tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 240 ||||| |||||| ||| | |||||||||||||||||||||||||||||||||||| || Sbjct: 849 gcagcggttgacgaatgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 908 Query: 241 gcggtaccaaatcgaggcaaactctgaatactag 274 |||||||||||||| ||||||| ||||||||| Sbjct: 909 gcggtaccaaatcgtagcaaactaagaatactag 942 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1320 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccgc 565 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 299 bits (151), Expect = 6e-78 Identities = 182/191 (95%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 461 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 520 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 521 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 580 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 581 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaaca 640 |||||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggc-ttgagtaacgcaaaca 933 Query: 641 ttggtgagaat 651 ||||||||||| Sbjct: 934 ttggtgagaat 944
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 293 bits (148), Expect = 4e-76 Identities = 246/275 (89%), Gaps = 4/275 (1%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 858 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 859 ggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgg 918 Query: 124 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 183 ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 919 ttaggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgagg 978 Query: 184 cgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 240 |||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 979 cgcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgaga 1038 Query: 241 gcggtaccaaatcgaggcaaactctgaatactaga 275 |||||||||||||| ||||||| |||||||||| Sbjct: 1039 gcggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 532 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 75.8 bits (38), Expect = 2e-10 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1442
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 293 bits (148), Expect = 4e-76 Identities = 296/344 (86%), Gaps = 6/344 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggc-ttgagtagcgaaaacattggtgagaat 2842 Score = 250 bits (126), Expect = 5e-63 Identities = 226/258 (87%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| || ||||||| |||| ||||| ||||||||| | | | ||| | Sbjct: 2234 ttatagacccgaacccggatgatctagtcatggccagg-atgaagcttaggtaacactga 2292 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 2293 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaa 2352 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| ||||| || ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2353 atgccaatcgaatccggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 2412 Query: 195 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 254 | | | | ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2413 aatttaagcttgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 2472 Query: 255 aggcaaactctgaatact 272 | |||||||||||||||| Sbjct: 2473 atgcaaactctgaatact 2490
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 274 bits (138), Expect = 3e-70 Identities = 240/272 (88%), Gaps = 4/272 (1%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 |||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggt 738 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 739 aaaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 798 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 799 ggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 858 Query: 187 agcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||| || ||| || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 859 agcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcg 918 Query: 244 gtaccaaatcgaggcaaactctgaatactaga 275 ||||||||||| ||||||| |||||||||| Sbjct: 919 gtaccaaatcgtagcaaactaagaatactaga 950 Score = 75.8 bits (38), Expect = 2e-10 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1347 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccgc 565 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 289 bits (146), Expect = 6e-75 Identities = 244/273 (89%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 734 ttgtcactttttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgg 792 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||| ||| || |||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 793 gtaaaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 852 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 853 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggc 912 Query: 185 gcagcagttga--ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 241 ||||| ||||| || | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 913 gcagcggttgatgttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 972 Query: 242 cggtaccaaatcgaggcaaactctgaatactag 274 ||||||||||||| ||||||| ||||||||| Sbjct: 973 cggtaccaaatcgtagcaaactaagaatactag 1005 Score = 224 bits (113), Expect = 3e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 532 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1484
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 285 bits (144), Expect = 9e-74 Identities = 245/276 (88%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||| | |||| Sbjct: 659 tgtcattgcttgtggacccgaacttgggtgatctaaccatgaccagg-atgcaatttggt 717 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 | |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 taaaactaagtgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggtt 777 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| ||||||||| ||||||||||||| ||||||||||| || ||||| Sbjct: 778 aggggtgaaatgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcg 837 Query: 186 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 245 |||||||| || || ||||||||||||||||| ||||| |||||||| || ||||||| Sbjct: 838 cagcagtt-accgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggt 896 Query: 246 accaaatcgaggcaaactctgaatactagatatgac 281 ||||||| |||||| ||| ||||||||||||||||| Sbjct: 897 accaaattgaggcagactatgaatactagatatgac 932 Score = 214 bits (108), Expect = 3e-52 Identities = 305/368 (82%), Gaps = 7/368 (1%) Strand = Plus / Plus Query: 284 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 343 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 344 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 403 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 404 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 463 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 464 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 523 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 524 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 583 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 584 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattg 643 | ||| | || || ||||| |||| |||||||||||| ||||||||| |||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggc-ttgagtaacacaaacattg 1296 Query: 644 gtgagaat 651 | |||||| Sbjct: 1297 gcgagaat 1304
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 285 bits (144), Expect = 9e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 6433 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 6434 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 6493 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 198 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 6494 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 6553 Query: 199 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 6554 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 6613 Query: 258 caaactctgaatactagatatgac 281 |||||||||||||||||| ||||| Sbjct: 6614 caaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811 Score = 60.0 bits (30), Expect = 1e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 6983 aagcagaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 7031
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 285 bits (144), Expect = 9e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 3496 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 3497 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 3556 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 198 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 3557 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 3616 Query: 199 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 3617 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 3676 Query: 258 caaactctgaatactagatatgac 281 |||||||||||||||||| ||||| Sbjct: 3677 caaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874 Score = 60.0 bits (30), Expect = 1e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 4046 aagcagaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 4094
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 285 bits (144), Expect = 9e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 726 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 784 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 785 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 844 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 198 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 845 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 904 Query: 199 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 905 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 964 Query: 258 caaactctgaatactagatatgac 281 |||||||||||||||||| ||||| Sbjct: 965 caaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162 Score = 60.0 bits (30), Expect = 1e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1334 aagcagaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 1382
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 278 bits (140), Expect = 2e-71 Identities = 236/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 ||||||||||||||| |||||||||| ||||||||||| ||||||||| | | |||| | Sbjct: 826 ttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttcggtaaaacgga 884 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 885 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 944 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 945 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 1004 Query: 195 ac-tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 252 || ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1005 acgtgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 1064 Query: 253 cgaggcaaactctgaatactagat 276 || ||||||| ||||||||||| Sbjct: 1065 cgtagcaaactaagaatactagat 1088 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 101 bits (51), Expect = 3e-18 Identities = 94/107 (87%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 604 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1515
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 9e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 304 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 363 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 364 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 423 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 424 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 484 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 543 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 544 catcggtaggggagcgttccgc 565 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 220 bits (111), Expect = 4e-54 Identities = 224/259 (86%), Gaps = 7/259 (2%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| | ||||||||| |||||| | || Sbjct: 676 gacccgaacccgggtgatctaaccatggccagg-aggaagcttgggtgaaaccttgtgga 734 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||| || |||||||| || |||||||||||||||||||||||||||| || Sbjct: 735 agtccgaaccgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaatacc 794 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga---- 195 | |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 795 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaa 854 Query: 196 -ctggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 253 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 855 gatgggcagtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 914 Query: 254 gaggcaaactctgaatact 272 | ||||||| ||||||| Sbjct: 915 gtagcaaactaagaatact 933 Score = 67.9 bits (34), Expect = 4e-08 Identities = 50/54 (92%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 1292
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 276 bits (139), Expect = 9e-71 Identities = 239/270 (88%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 114764 ttgtcactatttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttgg 114706 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||||||| |||| |||||| || | |||||||| ||| | ||||||||||||||| Sbjct: 114705 gtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggt 114646 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 114645 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggc 114586 Query: 185 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||| ||||| | | | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 114585 gcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcg 114526 Query: 244 gtaccaaatcgaggcaaactctgaatacta 273 |||||||||||||||||||||||||||||| Sbjct: 114525 gtaccaaatcgaggcaaactctgaatacta 114496 Score = 276 bits (139), Expect = 9e-71 Identities = 239/270 (88%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 2753 ttgtcactatttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttgg 2811 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||||||| |||| |||||| || | |||||||| ||| | ||||||||||||||| Sbjct: 2812 gtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggt 2871 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 2872 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggc 2931 Query: 185 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||| ||||| | | | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 2932 gcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcg 2991 Query: 244 gtaccaaatcgaggcaaactctgaatacta 273 |||||||||||||||||||||||||||||| Sbjct: 2992 gtaccaaatcgaggcaaactctgaatacta 3021 Score = 202 bits (102), Expect = 1e-48 Identities = 198/230 (86%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 536 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 1e-48 Identities = 198/230 (86%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 536 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 114131 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 3386 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 catcggtaggggagcgttccg 564 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 catcggtaggggagcgttccg 564 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 204 bits (103), Expect = 3e-49 Identities = 158/175 (90%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 303 gacccgaacccgggtgatctaaccatgtccagg-atgaagcttgggtaaaaccaagtgga 361 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 362 ggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcc 421 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 | |||||||| ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 422 aatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 267 aatac 271 ||||| Sbjct: 550 aatac 554
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 674 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgacaccaagtgaa 732 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 733 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 792 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 198 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 793 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataag 852 Query: 199 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 258 | | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 853 gctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggc 912 Query: 259 aaactctgaatactagata 277 ||||||||||||||||||| Sbjct: 913 aaactctgaatactagata 931 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 1290
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgacaccaagtgaa 25541 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 25542 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 25601 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 198 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 25602 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataag 25661 Query: 199 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 258 | | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 25662 gctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggc 25721 Query: 259 aaactctgaatactagata 277 ||||||||||||||||||| Sbjct: 25722 aaactctgaatactagata 25740 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggc-ttgagtaacgcaaacattggtgagaat 26099
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 268 bits (135), Expect = 2e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 189600 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 189658 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 189659 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaa 189718 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 189719 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 189778 Query: 195 actggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 253 | ||| | ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 189779 atgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 189838 Query: 254 gaggcaaactctgaatac 271 |||||||||||||||||| Sbjct: 189839 gaggcaaactctgaatac 189856 Score = 268 bits (135), Expect = 2e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 151027 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 151085 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 151086 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaa 151145 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 151146 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 151205 Query: 195 actggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 253 | ||| | ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 151206 atgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 151265 Query: 254 gaggcaaactctgaatac 271 |||||||||||||||||| Sbjct: 151266 gaggcaaactctgaatac 151283 Score = 248 bits (125), Expect = 2e-62 Identities = 291/344 (84%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| || |||| ||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggc-ttaagtagcgaaaacattggtgagaat 190212 Score = 248 bits (125), Expect = 2e-62 Identities = 291/344 (84%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| || |||| ||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggc-ttaagtagcgaaaacattggtgagaat 151639
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 264 bits (133), Expect = 3e-67 Identities = 231/262 (88%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 14 cttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaacta 73 ||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||| | Sbjct: 656 cttatggacccgaacctgggtgatctaaccatgaccaggg-tgaagcttgggtaaaacca 714 Query: 74 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 133 || || | ||||||| |||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 715 agtggaagcccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtga 774 Query: 134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---a 190 ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 775 aatgccaatcgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggtt 834 Query: 191 gttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 250 ||||| || | || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 835 gttgatgggtcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaa 894 Query: 251 atcgaggcaaactctgaatact 272 |||| |||||||| ||||||| Sbjct: 895 atcgtggcaaactaagaatact 916 Score = 194 bits (98), Expect = 3e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 547 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 548 ggtaggggagcgttccgc 565 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 83.8 bits (42), Expect = 7e-13 Identities = 52/54 (96%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcgg-tttgagtaacgaaaacattggtgagaat 1277
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 206 bits (104), Expect = 7e-50 Identities = 165/184 (89%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 |||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||| Sbjct: 660 tgtccctgcttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttcag 718 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 | ||| ||| ||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 719 taaaatgaagtggaggtccgaaccgaccgatgttgaaaaatcggctgatgagttgtggtt 778 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 185 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 779 aggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcg 838 Query: 186 cagc 189 |||| Sbjct: 839 cagc 842 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1252 gaagtgagaatgtcggc-ttgagtagcgaaaacattggtgagaat 1295 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 202 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 261 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 262 ctctgaatactagata 277 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 260 bits (131), Expect = 5e-66 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 188677 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 188735 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | |||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||| Sbjct: 188736 gtggaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaa 188795 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 188796 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 188855 Query: 195 a--ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 252 | || | | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 188856 atgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 188914 Query: 253 cgaggcaaactctgaatacta 273 ||||||||||||||||||||| Sbjct: 188915 cgaggcaaactctgaatacta 188935 Score = 252 bits (127), Expect = 1e-63 Identities = 230/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 150234 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 150292 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||| |||||| |||||||| ||| |||||||||||||||| |||||||||| Sbjct: 150293 gtggaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaa 150352 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 150353 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 150412 Query: 195 a--ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 252 | || | | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150413 atgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150471 Query: 253 cgaggcaaactctgaatacta 273 ||||||||||||||||||||| Sbjct: 150472 cgaggcaaactctgaatacta 150492 Score = 228 bits (115), Expect = 2e-56 Identities = 287/342 (83%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| || |||| ||||||||||||||||||| Sbjct: 189249 gcgagaatgtcggc-ttaagtagcgaaaacattggtgagaat 189289 Score = 228 bits (115), Expect = 2e-56 Identities = 287/342 (83%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 310 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 369 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 370 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 429 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 430 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 489 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 490 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 549 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 550 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 609 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 610 gcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| || |||| ||||||||||||||||||| Sbjct: 150806 gcgagaatgtcggc-ttaagtagcgaaaacattggtgagaat 150846
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 258 bits (130), Expect = 2e-65 Identities = 228/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| |||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaacccgggtgatctaaccatgtccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 414 atgccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggtaa 473 Query: 195 actggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 253 | |||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 cgattaaatctagggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 533 Query: 254 gaggcaaactctgaatac 271 ||| ||||||| |||||| Sbjct: 534 gagacaaactcagaatac 551 Score = 208 bits (105), Expect = 2e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 44.1 bits (22), Expect = 0.57 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| || |||| |||||||||||| ||||||| ||||||||| |||||||| Sbjct: 855 gacgaggcagaagtgagaatgtcggc-ttgagtagcgaaaacatgtgtgagaat 907
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 258 bits (130), Expect = 2e-65 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||||| |||||||| ||||||||||| ||||||||||| | |||| || Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccagg-atgaagcttgggtaaaaccaa 745 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 746 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 805 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 806 atgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttg 865 Query: 195 ac--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 | ||| | | | |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 866 tcgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaa 925 Query: 252 tcgaggcaaactctgaatact 272 ||| ||||||| ||||||| Sbjct: 926 tcgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 7e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1261 gacgaagcggaagtgagaatgtcgg-tttgagtaacgaaaacatcggtgagaat 1313
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 258 bits (130), Expect = 2e-65 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||||| |||||||| ||||||||||| ||||||||||| | |||| || Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccagg-atgaagcttgggtaaaaccaa 2483 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2484 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 2543 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2544 atgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttg 2603 Query: 195 ac--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 | ||| | | | |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 2604 tcgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaa 2663 Query: 252 tcgaggcaaactctgaatact 272 ||| ||||||| ||||||| Sbjct: 2664 tcgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 7e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2999 gacgaagcggaagtgagaatgtcgg-tttgagtaacgaaaacatcggtgagaat 3051
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 256 bits (129), Expect = 8e-65 Identities = 294/345 (85%), Gaps = 3/345 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 488 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| ||||| |||||||||| Sbjct: 1241 gaagtgagaatgtcggc-ttgagtaacgcaaacactggtgagaat 1284 Score = 167 bits (84), Expect = 6e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 665 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 723 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 724 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 783 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 784 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 838 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 266 gaatact 272 ||||||| Sbjct: 917 gaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 256 bits (129), Expect = 8e-65 Identities = 294/345 (85%), Gaps = 3/345 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 488 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| ||||| |||||||||| Sbjct: 1254 gaagtgagaatgtcggc-ttgagtaacgcaaacactggtgagaat 1297 Score = 167 bits (84), Expect = 6e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 678 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 736 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 737 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 796 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 851 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 266 gaatact 272 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 256 bits (129), Expect = 8e-65 Identities = 294/345 (85%), Gaps = 3/345 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 488 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 546 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 547 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 606 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| |||||||||| ||||| |||||||||| Sbjct: 5828 gaagtgagaatgtcggc-ttgagtaacgcaaacactggtgagaat 5871 Score = 167 bits (84), Expect = 6e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 5252 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 5310 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 5311 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 5370 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5371 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 5425 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 266 gaatact 272 ||||||| Sbjct: 5504 gaatact 5510
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 256 bits (129), Expect = 8e-65 Identities = 229/260 (88%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| Sbjct: 2494 ttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttaggtaaaactaa 2552 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 2553 atggaggcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaa 2612 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 194 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2613 atgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 2672 Query: 195 a-ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 253 | | || |||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 2673 atgttataatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatc 2732 Query: 254 gaggcaaactctgaatacta 273 |||||||||||||||||||| Sbjct: 2733 gaggcaaactctgaatacta 2752 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 500 gaacggggctaagcgatctgccgaagctgtgggatgt 536 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 71.9 bits (36), Expect = 3e-09 Identities = 91/108 (84%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 544 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 603 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 604 gcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 3125
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 545 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 546 tcggtaggggagcgttccg 564 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 210 bits (106), Expect = 4e-51 Identities = 224/260 (86%), Gaps = 5/260 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| || | |||| ||||| ||||| | | |||||| || Sbjct: 683 gacccgaacccgggtgatctaaccgcggtcagg-atgaaacttgggtaagactaagtgga 741 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 742 ggtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatgcc 801 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gac 196 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 802 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgat 861 Query: 197 tggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 255 | | | |||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 862 taggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgt 921 Query: 256 ggcaaactctgaatactaga 275 |||||||| |||||||||| Sbjct: 922 agcaaactccgaatactaga 941 Score = 48.1 bits (24), Expect = 0.036 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaaca 640 |||||| |||||||||||| |||||||||||||||| Sbjct: 1252 cggaagtgagaatgtcggc-ttgagtaacgaaaaca 1286
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 529 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 529 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 170 bits (86), Expect = 4e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 170823 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 170765 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 170764 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 170705 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 170704 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 170 bits (86), Expect = 4e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 122103 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 122161 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 122162 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 122221 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 122222 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 266 gaatact 272 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 266 gaatact 272 ||||||| Sbjct: 122369 gaatact 122375 Score = 56.0 bits (28), Expect = 1e-04 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| |||||||||| |||| |||||||||| Sbjct: 170234 aagtgagaatgtcggc-ttgagtaacgcaaacgctggtgagaat 170192 Score = 56.0 bits (28), Expect = 1e-04 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| |||||||||| |||| |||||||||| Sbjct: 122692 aagtgagaatgtcggc-ttgagtaacgcaaacgctggtgagaat 122734
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 5e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 546 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 547 cggtaggggagcgttccg 564 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 204 bits (103), Expect = 3e-49 Identities = 158/175 (90%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 2378 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 2436 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2437 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 2496 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2497 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 267 aatac 271 ||||| Sbjct: 2630 aatac 2634 Score = 48.1 bits (24), Expect = 0.036 Identities = 37/40 (92%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 612 gagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| ||||| || |||||||||||||||| Sbjct: 2955 gagaatgtcggctt-gagtagcgcaaacattggtgagaat 2993
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 529 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 170 bits (86), Expect = 4e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 694 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 752 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 753 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 812 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 813 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 266 gaatact 272 ||||||| Sbjct: 960 gaatact 966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||| |||||||||| |||| |||||||||| Sbjct: 1283 aagtgagaatgtcggc-ttgagtaacgcaaacgctggtgagaat 1325
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 78 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 137 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 138 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 197 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 198 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 254 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 255 aggcaaactctgaatactag 274 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 192 bits (97), Expect = 1e-45 Identities = 220/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 366 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 487 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 545 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 546 tcggtaggggagcgttc 562 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 52 |||||||| ||||||||||||| | | |||||||| ||||||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagg 710
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 212 bits (107), Expect = 1e-51 Identities = 165/183 (90%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 ||||||| |||| |||||||||| |||||||||| ||||| ||||| ||||||||||| | Sbjct: 288 gtcactgtttatagacccgaacccgggtgatctaaccatgtccagg-atgaagcttgggt 346 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 | || ||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 347 aacaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggtta 406 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| | Sbjct: 407 ggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcac 466 Query: 187 agc 189 ||| Sbjct: 467 agc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 267 aatac 271 ||||| Sbjct: 548 aatac 552
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 248 bits (125), Expect = 2e-62 Identities = 227/259 (87%), Gaps = 4/259 (1%) Strand = Plus / Plus Query: 19 ggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcag 78 ||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| | Sbjct: 658 ggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgg 716 Query: 79 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 138 |||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 717 aggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgc 776 Query: 139 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---ga 195 || |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 777 caatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcga 836 Query: 196 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 255 | || |||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 837 cgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgt 896 Query: 256 ggcaaactctgaatactag 274 ||||||| ||||||||| Sbjct: 897 agcaaactaagaatactag 915 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 67.9 bits (34), Expect = 4e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 1284 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccg 564 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 354 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 267 aatac 271 ||||| Sbjct: 547 aatac 551 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 912
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 5434689 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 5434631 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 5434630 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 5434571 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5434570 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 3896749 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 3896807 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 3896808 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 3896867 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 3896868 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 3896922 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 2807410 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 2807352 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 2807351 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 2807292 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2807291 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2807237 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 1005592 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 1005650 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 1005651 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 1005710 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1005711 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 267 aatac 271 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 267 aatac 271 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 267 aatac 271 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 267 aatac 271 ||||| Sbjct: 1005844 aatac 1005848 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 5434071 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 3897367 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 2806792 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 1006210
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 5944729 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 5944671 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 5944670 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 5944611 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5944610 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 4917085 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 4917027 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 4917026 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 4916967 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 4916966 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 2503211 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 2503269 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 2503270 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 2503329 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2503330 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2503384 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 2378420 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 2378478 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 2378479 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 2378538 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2378539 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 267 aatac 271 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 267 aatac 271 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 267 aatac 271 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 267 aatac 271 ||||| Sbjct: 2378672 aatac 2378676 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 5944114 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 4916470 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 2503826 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 2380506
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 186 bits (94), Expect = 6e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 16 tatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaag 75 |||||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| Sbjct: 695 tatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaacgaag 753 Query: 76 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135 || | |||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 754 tggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 813 Query: 136 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 814 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 203 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 262 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 263 tctgaatactaga 275 || |||||||||| Sbjct: 944 tcagaatactaga 956 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1334
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 186 bits (94), Expect = 6e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 16 tatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaag 75 |||||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| Sbjct: 2464 tatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaacgaag 2522 Query: 76 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135 || | |||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 2523 tggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 2582 Query: 136 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2583 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 203 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 262 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 263 tctgaatactaga 275 || |||||||||| Sbjct: 2713 tcagaatactaga 2725 Score = 75.8 bits (38), Expect = 2e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 3103
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 242 bits (122), Expect = 1e-60 Identities = 229/260 (88%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 192 |||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaa 473 Query: 193 tgactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 ||| | | |||| | |||||||||||||||||||||||||||| | || |||||||||| Sbjct: 474 tgatt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaa 531 Query: 252 tcgaggcaaactctgaatac 271 ||||| |||||||||||||| Sbjct: 532 tcgagacaaactctgaatac 551 Score = 230 bits (116), Expect = 5e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggc-ttgagtagcgcaaacattggtgagaat 911 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccg 564 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 240 bits (121), Expect = 5e-60 Identities = 233/268 (86%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccaggg-tgaagcttaggt 2487 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 2488 aacactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgatta 2547 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 2548 ggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgc 2607 Query: 187 agcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggt 245 ||| ||||| | | | ||||||||||||||||||||||| ||||||| | |||||| Sbjct: 2608 agcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggt 2667 Query: 246 accaaatcgaggcaaactctgaatacta 273 |||||||||||||||||||||||||||| Sbjct: 2668 accaaatcgaggcaaactctgaatacta 2695 Score = 163 bits (82), Expect = 9e-37 Identities = 215/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 488 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 546 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 547 cggtaggggagcgttc 562 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||| |||||||||||||| |||| ||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggctta-agtagcgaaaacattggtgagaat 3047
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 218 bits (110), Expect = 2e-53 Identities = 221/255 (86%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 2216 gacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgga 2274 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 2275 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 2334 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||| | ||||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 2335 aatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgg 2392 Query: 200 acatcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 256 | | || ||||||||||||||||||| |||||||| | || ||||||||| |||| Sbjct: 2393 aagtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgag 2452 Query: 257 gcaaactctgaatac 271 ||||||||||||||| Sbjct: 2453 gcaaactctgaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 354 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 206 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 265 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 266 gaatact 272 ||||||| Sbjct: 546 gaatact 552 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggc-ttgagtagcgcaaacattggtgagaat 911
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 3e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 487 ttgcgctgaagatgaacggggctaag 512 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 196 bits (99), Expect = 6e-47 Identities = 157/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccccggtgatctaaccatgtccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 267 aatactagat 276 ||||| |||| Sbjct: 547 aataccagat 556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||| |||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggc-ttgagtagcgcaaacattggtgagaat 912
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 234 bits (118), Expect = 3e-58 Identities = 228/260 (87%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 192 |||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaa 473 Query: 193 tgactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 ||| | | |||| | |||||||||||||||||||||||||||| | || |||||||||| Sbjct: 474 tgatt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaa 531 Query: 252 tcgaggcaaactctgaatac 271 ||||| |||||||||||||| Sbjct: 532 tcgagacaaactctgaatac 551 Score = 214 bits (108), Expect = 3e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 530 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctt 625 |||||| |||||| |||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggctt 888
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 234 bits (118), Expect = 3e-58 Identities = 229/264 (86%), Gaps = 4/264 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| |||||||||| ||||| ||||| ||||||||||| | | | || Sbjct: 677 ttatagacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaacaacaa 735 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 736 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaa 795 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 192 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaa 855 Query: 193 -tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 ||| || |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 856 atgatgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaa 915 Query: 252 tcgaggcaaactctgaatactaga 275 ||| |||||||| |||||||||| Sbjct: 916 tcgtggcaaactaagaatactaga 939 Score = 214 bits (108), Expect = 3e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagct 527 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1310
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 234 bits (118), Expect = 3e-58 Identities = 229/264 (86%), Gaps = 4/264 (1%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| |||||||||| ||||| ||||| ||||||||||| | | | || Sbjct: 2559 ttatagacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaacaacaa 2617 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 2618 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaa 2677 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 192 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 2678 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaa 2737 Query: 193 -tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 ||| || |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 2738 atgatgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaa 2797 Query: 252 tcgaggcaaactctgaatactaga 275 ||| |||||||| |||||||||| Sbjct: 2798 tcgtggcaaactaagaatactaga 2821 Score = 214 bits (108), Expect = 3e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagct 527 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggctt-gagtaacgaaaacattggtgagaat 3192
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 1e-57 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 542 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 543 gcatcggtaggggagcgttccg 564 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 172 bits (87), Expect = 9e-40 Identities = 154/175 (88%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatgtccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagc 468 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 267 aatac 271 ||||| Sbjct: 547 aatac 551 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctt 625 |||||| |||||| |||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggctt 888
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 232 bits (117), Expect = 1e-57 Identities = 133/137 (97%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 4 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 63 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 48 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttg 106 Query: 64 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 123 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 166 Query: 124 ttaggggtgaaatgcca 140 ||||||||||||||||| Sbjct: 167 ttaggggtgaaatgcca 183
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 5e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 218 bits (110), Expect = 2e-53 Identities = 221/255 (86%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 300 gacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgga 358 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 359 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 418 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||| | ||||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 419 aatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgg 476 Query: 200 acatcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 256 | | || ||||||||||||||||||| |||||||| | || ||||||||| |||| Sbjct: 477 aagtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgag 536 Query: 257 gcaaactctgaatac 271 ||||||||||||||| Sbjct: 537 gcaaactctgaatac 551
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 5e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 188 bits (95), Expect = 2e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 354 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 267 aatac 271 ||||| Sbjct: 547 aatac 551 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 605 cggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||||||||||| ||||| || |||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggctt-gagtagcgcaaacattggtgagaat 912
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 202 bits (102), Expect = 1e-48 Identities = 206/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Minus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 2051170 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 2051112 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 2051111 gggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 2051052 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 2051051 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacggg 2050993 Query: 200 -acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 255 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050992 tacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 202 bits (102), Expect = 1e-48 Identities = 206/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 1450331 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 1450389 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1450390 gggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 1450449 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1450450 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacggg 1450508 Query: 200 -acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 255 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450509 tacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565 Score = 56.0 bits (28), Expect = 1e-04 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||| ||| ||||||| || | |||||||||||||| Sbjct: 2050613 aagtgagaatgttggc-ttgagtagcgcagacattggtgagaat 2050571 Score = 56.0 bits (28), Expect = 1e-04 Identities = 86/104 (82%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 548 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 607 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 608 aagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||| |||||||| ||||| ||||| || |||||||||||||||| Sbjct: 1450888 aagtgagaatgttggctt-gagtagcgcaaacattggtgagaat 1450930
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 220 bits (111), Expect = 4e-54 Identities = 234/273 (85%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 137154 ttgtcacttcttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgg 137212 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||| ||| || | |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 137213 gtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 137272 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||| ||||| | | |||||| | |||||||||||||||| ||||||| |||||||| Sbjct: 137273 taggggagaaattctaatcgaactcggagctagctggttctcttcgaaatgtgttgaggc 137332 Query: 185 gcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 241 ||||| ||| ||| || ||||||||||||||||||||||||||||||||| | | Sbjct: 137333 gcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctgggaaac 137392 Query: 242 cggtaccaaatcgaggcaaactctgaatactag 274 |||||||||||| |||||||| ||||||||| Sbjct: 137393 tggtaccaaatcgtagcaaactcagaatactag 137425 Score = 220 bits (111), Expect = 4e-54 Identities = 234/273 (85%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 48390 ttgtcacttcttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgg 48332 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | |||| ||| || | |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 48331 gtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 48272 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||| ||||| | | |||||| | |||||||||||||||| ||||||| |||||||| Sbjct: 48271 taggggagaaattctaatcgaactcggagctagctggttctcttcgaaatgtgttgaggc 48212 Query: 185 gcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 241 ||||| ||| ||| || ||||||||||||||||||||||||||||||||| | | Sbjct: 48211 gcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctgggaaac 48152 Query: 242 cggtaccaaatcgaggcaaactctgaatactag 274 |||||||||||| |||||||| ||||||||| Sbjct: 48151 tggtaccaaatcgtagcaaactcagaatactag 48119 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| ||||||||| || ||||||| || |||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagc-ttgagtagcgcaaacattggtgagaat 137792 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| ||||||||| || ||||||| || |||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagc-ttgagtagcgcaaacattggtgagaat 47752
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 228 bits (115), Expect = 2e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcg-tgaagcttag 39704 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 39703 gtaacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggt 39644 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 39643 taggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggc 39584 Query: 185 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||| |||| || | |||||||||||||||||||||||||||||||| ||| Sbjct: 39583 gcagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcg 39524 Query: 244 gtaccaaatcgaggcaaactctgaatacta 273 |||||||||||| ||||||||||||||||| Sbjct: 39523 gtaccaaatcgatgcaaactctgaatacta 39494 Score = 228 bits (115), Expect = 2e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcg-tgaagcttag 19696 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 19697 gtaacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggt 19756 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 19757 taggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggc 19816 Query: 185 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 243 ||||| |||| || | |||||||||||||||||||||||||||||||| ||| Sbjct: 19817 gcagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcg 19876 Query: 244 gtaccaaatcgaggcaaactctgaatacta 273 |||||||||||| ||||||||||||||||| Sbjct: 19877 gtaccaaatcgatgcaaactctgaatacta 19906 Score = 172 bits (87), Expect = 9e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 39289 Query: 500 gaacggggctaagcgatctgccgaagctgtgggat 534 || ||| ||||| || ||||||||||||||||| Sbjct: 39288 gactgggactaagtaatttgccgaagctgtgggat 39254 Score = 172 bits (87), Expect = 9e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 20111 Query: 500 gaacggggctaagcgatctgccgaagctgtgggat 534 || ||| ||||| || ||||||||||||||||| Sbjct: 20112 gactgggactaagtaatttgccgaagctgtgggat 20146 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 39186 gaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 39143 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 20214 gaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 20257
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 228 bits (115), Expect = 2e-56 Identities = 221/254 (87%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 21 acccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcagag 80 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccaggg-tgaagcttgggtaaaactaagtggag 1190 Query: 81 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 140 | |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1191 gcccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgcca 1250 Query: 141 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 200 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1251 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagatta 1310 Query: 201 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 259 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1311 taacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgca 1370 Query: 260 aactctgaatacta 273 |||| |||||||| Sbjct: 1371 aactaagaatacta 1384 Score = 216 bits (109), Expect = 7e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 500 gaacggggctaagcgatctgccgaagctgtgggatgt 536 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 60.0 bits (30), Expect = 1e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtga 647 |||||| |||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggc-ttgagtagcgaaaacattggtga 1774
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 226 bits (114), Expect = 7e-56 Identities = 227/260 (87%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 192 |||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaa 473 Query: 193 tgactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 251 ||| | | |||| | |||||||||||||||||||||||||||| | || |||||||||| Sbjct: 474 tgatt--aaatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaa 531 Query: 252 tcgaggcaaactctgaatac 271 ||||| ||||||| |||||| Sbjct: 532 tcgagacaaactcagaatac 551 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 487 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 226 bits (114), Expect = 7e-56 Identities = 236/273 (86%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 |||||| |||||||||||||||| |||||||||| |||| ||||| ||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccagg-atgaaatttgggt 914 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| ||| Sbjct: 915 aacaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgatta 974 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 975 ggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgc 1034 Query: 187 agcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcg 243 ||| ||| || | |||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 1035 agcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcg 1094 Query: 244 gtaccaaatcgaggcaaactctgaatactagat 276 ||||||| ||| ||||||||| ||||||||||| Sbjct: 1095 gtaccaagtcgtggcaaactcagaatactagat 1127 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 342 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 401 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 402 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 461 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 462 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 521 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1297 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1356 Query: 522 gaagctgtg 530 ||||||||| Sbjct: 1357 gaagctgtg 1365 Score = 69.9 bits (35), Expect = 1e-08 Identities = 42/43 (97%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 609 agcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1715 agcgagaatgtcggctt-gagtaacgaaaacattggtgagaat 1756
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 226 bits (114), Expect = 7e-56 Identities = 241/277 (87%), Gaps = 6/277 (2%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 |||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||| | Sbjct: 692 gtcacttcttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggt 750 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 || | ||| ||||||||||||||| ||||||||| |||| |||||||||||||||||| Sbjct: 751 aaatccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtta 810 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 811 ggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgc 870 Query: 187 agcagt--tgactggac-atctaggggtaaagc-actgtttcggtgcgggctgcgcgagc 242 ||| || || || || |||| |||||||||| ||||||||| ||||||||||| || Sbjct: 871 agcggtaacga-tgaactatcttggggtaaagctactgtttcgatgcgggctgcgaaagt 929 Query: 243 ggtaccaaatcgaggcaaactctgaatactagatatg 279 |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 930 ggtaccaagtcgtggcaaactcagaatacaagatatg 966 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201 Score = 63.9 bits (32), Expect = 6e-07 Identities = 39/40 (97%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 612 gagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1287 gagaatgtcggctt-gagtaacgaaaacattggtgagaat 1325
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 226 bits (114), Expect = 7e-56 Identities = 229/262 (87%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | | | Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaataccacgtgaa 2777 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 2778 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 2837 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||| | ||||||||||||||||||||||||||||||||||||| | || | | Sbjct: 2838 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaag 2896 Query: 200 ac-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 || |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| || Sbjct: 2897 actatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtgg 2956 Query: 258 caaactctgaatactagatatg 279 |||||||||||||||||||||| Sbjct: 2957 caaactctgaatactagatatg 2978 Score = 93.7 bits (47), Expect = 7e-16 Identities = 143/170 (84%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 306 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 365 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 366 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 425 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 426 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||||||| |||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152 Score = 67.9 bits (34), Expect = 4e-08 Identities = 50/54 (92%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||| |||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 3277 gacgaagcagaagtgagaatgtcggctt-gagtaacgtaaacattggtgagaat 3329
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 3e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 488 tgcgctgaagatgaacggggctaag 512 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 210 bits (106), Expect = 4e-51 Identities = 155/170 (91%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 301 gacccgaacccgggtgatctaaccatgtccagg-atgaagcttgggtaaaaccaagtgga 359 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 360 ggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcc 419 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 267 aatac 271 ||||| Sbjct: 548 aatac 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||||||| |||||||||||| ||||||| |||||| | ||||||||| Sbjct: 857 gacgaagcggaagtgagaatgtcggc-ttgagtagcgaaaatttaggtgagaat 909
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 210 bits (106), Expect = 4e-51 Identities = 220/255 (86%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 2215 gacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgga 2273 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 2274 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 2333 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||| | ||||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 2334 aatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgg 2391 Query: 200 acatcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 256 | | || ||||||||||||||||||| |||||||| | || |||||||| |||| Sbjct: 2392 aagtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgag 2451 Query: 257 gcaaactctgaatac 271 ||||||||||||||| Sbjct: 2452 gcaaactctgaatac 2466
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Minus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 427 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 428 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 487 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 488 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 212 bits (107), Expect = 1e-51 Identities = 219/254 (86%), Gaps = 3/254 (1%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||| | | | |||||| || Sbjct: 3327698 gacccgaacccgggtgatctaaccatggccagg-atgaagcttaggtaacactaagtgga 3327756 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 3327757 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 3327816 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 3327817 aatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaag 3327876 Query: 200 acatct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| |||| Sbjct: 3327877 tcaacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgagg 3327936 Query: 258 caaactctgaatac 271 ||||||| |||||| Sbjct: 3327937 caaactcagaatac 3327950 Score = 212 bits (107), Expect = 1e-51 Identities = 219/254 (86%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| |||||||||| ||||| ||||| ||||||||| | | | |||||| || Sbjct: 2451030 gacccgaacccgggtgatctaaccatggccagg-atgaagcttaggtaacactaagtgga 2450972 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 2450971 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 2450912 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 199 | |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 2450911 aatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaag 2450852 Query: 200 acatct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| |||| Sbjct: 2450851 tcaacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgagg 2450792 Query: 258 caaactctgaatac 271 ||||||| |||||| Sbjct: 2450791 caaactcagaatac 2450778 Score = 42.1 bits (21), Expect = 2.2 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| ||||||| |||||| || ||||||||| Sbjct: 3328262 gaagtgagaatgtcggc-ttgagtagcgaaaatatgggtgagaat 3328305 Score = 42.1 bits (21), Expect = 2.2 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| ||||||| |||||| || ||||||||| Sbjct: 2450466 gaagtgagaatgtcggc-ttgagtagcgaaaatatgggtgagaat 2450423
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 220 bits (111), Expect = 4e-54 Identities = 223/257 (86%), Gaps = 4/257 (1%) Strand = Plus / Minus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 27136 gacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaagtgga 27078 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 ||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||| Sbjct: 27077 ggtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcc 27018 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 197 | ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27017 aatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgct 26958 Query: 198 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 257 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 26957 ata-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatg 26899 Query: 258 caaactctgaatactag 274 ||||||||||||||||| Sbjct: 26898 caaactctgaatactag 26882 Score = 159 bits (80), Expect = 1e-35 Identities = 191/228 (83%) Strand = Plus / Minus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 ||||||||||||| | || |||||||||||| || | ||| | ||| |||||||| Sbjct: 26808 aaggcccctaaataattactaagtgataaaggaagtaagaatgcgtaaacaaccaggagg 26749 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 || || |||||||||| | |||||||||||||||||||||||||||| | || | ||| Sbjct: 26748 ttcgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtttagtgatctt 26689 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 536 |||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 26688 gcgccgaaaatgaacggggctaagtaatttgccgaagctgtgggatgt 26641 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 26572 gaagtgagaatgtcggctt-gagtagcgaaaacattggtgagaat 26529
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 309 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 368 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 369 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 428 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 429 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 488 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 489 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 531 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 196 bits (99), Expect = 6e-47 Identities = 153/170 (90%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 2312982 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 2313040 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 2313041 gggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 2313100 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313101 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 196 bits (99), Expect = 6e-47 Identities = 153/170 (90%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 20 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 79 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 1108865 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 1108807 Query: 80 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 139 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1108806 gggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 1108747 Query: 140 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108746 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1108697 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||| |||||||| ||||| ||||| || |||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggctt-gagtagcgcaaacattggtgagaat 2313581 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||| ||||||| |||||||| ||||| ||||| || |||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggctt-gagtagcgcaaacattggtgagaat 1108266
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 220 bits (111), Expect = 4e-54 Identities = 244/280 (87%), Gaps = 10/280 (3%) Strand = Plus / Plus Query: 6 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 65 ||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccagg-atgaagcttggg 844 Query: 66 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 125 | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| ||||||| Sbjct: 845 taaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtt 904 Query: 126 aggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggc 184 ||||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| || Sbjct: 905 aggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gc 961 Query: 185 gcagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 239 ||||| || ||||| || |||||||||||||||||||||||||||||||||||| | Sbjct: 962 gcagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgag 1021 Query: 240 agcggtaccaaatcgaggcaaactctgaatactagatatg 279 ||||||||||||||| ||||||| ||||||||| |||| Sbjct: 1022 agcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 421 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 480 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 1184 ccaggaggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtgga 1243 Query: 481 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 534 ||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1244 gcgttcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1297 Score = 129 bits (65), Expect = 1e-26 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 308 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 367 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 368 taaggcccctaaatgaccgctcagtgataaaggaggt 404 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168 Score = 67.9 bits (34), Expect = 4e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 602 aagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 ||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1604 aagcggaagtgagaatgtcggctt-gagtaacgcaaacattggtgagaat 1652 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 atcggtaggggagcgttccgc 565 ||||||||||||||||||||| Sbjct: 1547 atcggtaggggagcgttccgc 1567
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 2e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 307 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 366 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 367 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 426 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 427 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 486 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 487 ttgcgctgaagatgaacggggctaag 512 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 196 bits (99), Expect = 6e-47 Identities = 157/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 15 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 74 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccccggtgatctaaccatgtccagg-atgaagcttgggtaacaccaa 353 Query: 75 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaa 413 Query: 135 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 189 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 207 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 266 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 267 aatactagat 276 ||||| |||| Sbjct: 547 aataccagat 556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||||| |||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggc-ttgagtagcgcaaacattggtgagaat 910
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 216 bits (109), Expect = 7e-53 Identities = 167/185 (90%), Gaps = 1/185 (0%) Strand = Plus / Minus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||| |||| || |||| |||||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 5944 gcgatcgtcagtgtttatagacccgaacccgggtgatctaaccatggccagg-atgaagc 5886 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 5885 ttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 5826 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| Sbjct: 5825 tggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgttg 5766 Query: 181 aggcg 185 ||||| Sbjct: 5765 aggcg 5761 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 5526 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 5525 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 5466 Query: 500 gaacggggctaag 512 ||||||||||||| Sbjct: 5465 gaacggggctaag 5453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 221 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 271 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 5359 gaagtgagaatgtcggc-ttgagtagcgaaaacatgggtgagaat 5316
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 216 bits (109), Expect = 7e-53 Identities = 167/185 (90%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 1 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagc 60 ||||| |||| || |||| |||||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 211828 gcgatcgtcagtgtttatagacccgaacccgggtgatctaaccatggccagg-atgaagc 211886 Query: 61 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 120 |||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||| || Sbjct: 211887 ttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctg 211946 Query: 121 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 180 |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| Sbjct: 211947 tggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgttg 212006 Query: 181 aggcg 185 ||||| Sbjct: 212007 aggcg 212011 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 320 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 379 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 380 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 439 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 212246 Query: 440 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 499 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 212247 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 212306 Query: 500 gaacggggctaag 512 ||||||||||||| Sbjct: 212307 gaacggggctaag 212319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 221 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 271 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 607 gaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||| |||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 212413 gaagtgagaatgtcggc-ttgagtagcgaaaacatgggtgagaat 212456
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 216 bits (109), Expect = 7e-53 Identities = 237/275 (86%), Gaps = 6/275 (2%) Strand = Plus / Plus Query: 7 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 66 |||||| | |||||||||||||| |||||||||| |||||||||| ||||||||||| | Sbjct: 805 gtcacttcctatggacccgaacccgggtgatctaatcatgaccagg-atgaagcttgggt 863 Query: 67 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 126 | || ||| ||||||||||||||| ||||||||| |||| |||||||||||||| ||| Sbjct: 864 aacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgatta 923 Query: 127 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 186 |||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 924 ggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgc 983 Query: 187 agcagttgact---ggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagc 242 ||| | ||||| | |||||| |||||||| ||||||||| ||||||||||| ||| Sbjct: 984 agc-ggtgactatgagctatctagaggtaaagctactgtttcgatgcgggctgcgaaagc 1042 Query: 243 ggtaccaaatcgaggcaaactctgaatactagata 277 |||||||| ||| ||||||||| |||||||||||| Sbjct: 1043 ggtaccaagtcgtggcaaactcagaatactagata 1077 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 342 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 401 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1185 Query: 402 ggtgggggtgcaaagacagccaggaggtttgcctagaa 439 ||| | |||| | ||| ||||||||||||| ||||| Sbjct: 1186 tgtgatgttgcagaaacaaccaggaggtttgcttagaa 1223 Score = 67.9 bits (34), Expect = 4e-08 Identities = 50/54 (92%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 598 gacgaagcggaagcgagaatgtcggctttgagtaacgaaaacattggtgagaat 651 |||||| |||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 2112 gacgaatcggaagtgagaatgttggctt-gagtaacgaaaacattggtgagaat 2164 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 435 tagaagcagccaccctttaaagagtgcgtaatagctcactg 475 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 216 bits (109), Expect = 7e-53 Identities = 164/181 (90%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 5 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 64 |||||| || |||| |||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 519 ttgtcagtgtttatagacccgaacccgggtgatctaaccatggccagg-atgaagcttgg 577 Query: 65 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 124 ||| || ||| ||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 578 gtgataccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggt 637 Query: 125 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 184 |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 638 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgttgaggc 697 Query: 185 g 185 | Sbjct: 698 g 698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 221 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 271 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,916,898 Number of Sequences: 3902068 Number of extensions: 3916898 Number of successful extensions: 73180 Number of sequences better than 10.0: 2664 Number of HSP's better than 10.0 without gapping: 2692 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 55347 Number of HSP's gapped (non-prelim): 16401 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
