ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalg13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846819.1| Triticum aestivum ribosomal protein L36 mRNA, complete cds Length = 406 Score = 379 bits (191), Expect = e-102 Identities = 282/311 (90%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||||| ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 69 tggcgccgtcgcagcccaagtcagggctcttcgtgggcatcaacaagggccacgtcgtca 128 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgc 129 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 129 ccaagcgcgagctgccgcctcgcccgtccgaccgcaaggggaaaggtacaaagagggtgc 188 Query: 130 atttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaagcgtatca 189 |||| || |||| ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 189 attttgtcaggaacttgatcagggaggttgctggatttgctccctatgagaagcgtatca 248 Query: 190 ctgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgg 249 |||||||||| |||||||| ||||| |||||||| || ||||| || ||| ||||| | | Sbjct: 249 ctgagcttcttaaggttggaaaggacaagcgtgcactcaaggtcgccaagagaaagcttg 308 Query: 250 gcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaagatga 309 | || |||||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 309 gtactcacaagagagcaaagaagaagagagaggagatgtcaagtgtccttaggaagatga 368 Query: 310 gatctgctggt 320 | ||||||||| Sbjct: 369 ggtctgctggt 379
>ref|XM_475364.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 342 Score = 369 bits (186), Expect = 7e-99 Identities = 277/306 (90%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||| | ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 2 tggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtca 61 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgc 129 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 62 ccaagcgcgagctgccgcctcgcccgtccgaccgcaaggggaaatccaccaagagggtga 121 Query: 130 atttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaagcgtatca 189 || || |||| ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 122 cctttgtcaggaacttgatcagggaggttgctggatttgctccctatgagaagcgtatca 181 Query: 190 ctgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgg 249 ||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| | | Sbjct: 182 ctgagcttctcaaagttggcaaggacaagcgtgcactgaaggtggcaaagagaaagcttg 241 Query: 250 gcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaagatga 309 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 242 gcacccacaagagggccaagaagaagagagaggagatggctggtgtcctcaggaagatga 301 Query: 310 gatctg 315 | |||| Sbjct: 302 ggtctg 307
>dbj|AK058918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-B04, full insert sequence Length = 579 Score = 369 bits (186), Expect = 7e-99 Identities = 277/306 (90%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||| | ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 51 tggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtca 110 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgc 129 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 111 ccaagcgcgagctgccgcctcgcccgtccgaccgcaaggggaaatccaccaagagggtga 170 Query: 130 atttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaagcgtatca 189 || || |||| ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 171 cctttgtcaggaacttgatcagggaggttgctggatttgctccctatgagaagcgtatca 230 Query: 190 ctgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgg 249 ||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| | | Sbjct: 231 ctgagcttctcaaagttggcaaggacaagcgtgcactgaaggtggcaaagagaaagcttg 290 Query: 250 gcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaagatga 309 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 291 gcacccacaagagggccaagaagaagagagaggagatggctggtgtcctcaggaagatga 350 Query: 310 gatctg 315 | |||| Sbjct: 351 ggtctg 356 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 327 accgagaagaagaagtagagtatc-ccaagctcgtgaagttaatggcaat 375 |||||||||||||| ||||||||| ||||| || |||||| |||||||| Sbjct: 374 accgagaagaagaaatagagtatctccaagttcatgaagtccatggcaat 423
>ref|NM_190535.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 321 bits (162), Expect = 2e-84 Identities = 277/314 (88%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||| ||||||||| |||||| |||||||| |||||||||||||||||||| |||| Sbjct: 2 tggcgccgccgcagcccaagtcggggctcttcgtcggcatcaacaagggccacgtcgtca 61 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgc 129 |||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||| Sbjct: 62 ccaagcgcgagctgccacctcgcccgtccgaccgcaaggggaaaagtaccaagagagtga 121 Query: 130 atttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaagcgtatca 189 |||| || ||| ||||||| |||||||||| || ||||||||||||||||| || |||| Sbjct: 122 attttgtcaggggcttgattagggaggttgtgggatttgctccatatgagaaacgaatca 181 Query: 190 ctgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgg 249 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| ||||| | | Sbjct: 182 ctgagcttctgaaggttggaaaggacaagcgtgcactgaaggtcgctaagagaaagctcg 241 Query: 250 gcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaagatga 309 | ||||||||||| || ||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 242 gtacccacaagagagcaaagaagaagagagaggagatggcgggtgtcatcaggaagatga 301 Query: 310 gatctgctggtact 323 | |||||||||||| Sbjct: 302 ggtctgctggtact 315
>gb|AY796052.1| Saccharum officinarum putative 60S ribosomal protein L36 mRNA, complete cds Length = 503 Score = 315 bits (159), Expect = 9e-83 Identities = 261/295 (88%) Strand = Plus / Plus Query: 28 agtcgggcctcttcgtgggcatcaacaagggccacgttgtcaccaagcgcgagctgccgc 87 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | Sbjct: 24 agtcgggcctcttcgtgggcatcaacaagggccatgtcgtcaccaagcgcgagctgcctc 83 Query: 88 cgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgcatttcgttaggagcttga 147 ||||||||||| ||||||||||||||| || ||||||||| | || ||| || ||| Sbjct: 84 cgcgcccgtcccaccgcaaggggaaagcaacgaagagggtgtccatggtcaggggcctga 143 Query: 148 tcagggaggttgctgggtttgctccatatgagaagcgtatcactgagcttctcaaggttg 207 |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 144 tcagagaggttgctgggtttgctccttatgagaagcgtatcactgagcttcttaaggttg 203 Query: 208 gcaaggataagcgtgctctgaaggtggcgaagcgaaagttgggcacccacaagagggcca 267 ||||||| ||||||||| ||||||| || ||| ||||| | || || ||||||||||| | Sbjct: 204 gcaaggacaagcgtgctttgaaggttgccaagagaaagcttggaactcacaagagggcaa 263 Query: 268 agaagaagagagaggagatgtccagtgtcctcaggaagatgagatctgctggtac 322 |||||||||||||||||||| | ||||||||| ||| |||||||| |||||||| Sbjct: 264 agaagaagagagaggagatggcgggtgtcctcaagaaaatgagatcggctggtac 318
>gb|AY103812.1| Zea mays PCO072020 mRNA sequence Length = 667 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Plus Query: 28 agtcgggcctcttcgtgggcatcaacaagggccacgttgtcaccaagcgcgagctgccgc 87 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | Sbjct: 70 agtcgggcctcttcgtgggcatcaacaagggccatgtcgtcaccaagcgcgagctgcctc 129 Query: 88 cgcgcccgtccgaccgcaaggggaaaggtaccaagagggtgcatttcgttaggagcttga 147 |||||||||| ||||||||||||||| || ||||||||| | || ||| || ||| Sbjct: 130 tgcgcccgtcccaccgcaaggggaaagcaacgaagagggtgtccatggtcaggggcctga 189 Query: 148 tcagggaggttgctgggtttgctccatatgagaagcgtatcactgagcttctcaaggttg 207 |||| ||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 190 tcagagaggttgctggctttgctccttatgagaagcgtatcaccgagcttctgaaggttg 249 Query: 208 gcaaggataagcgtgctctgaaggtggcgaagcgaaagttgggcacccacaagagggcca 267 ||||||| ||||| ||||||||| | || ||| ||||| | || || ||||||||||| | Sbjct: 250 gcaaggacaagcgcgctctgaagcttgccaagagaaagcttggaactcacaagagggcaa 309 Query: 268 agaagaagagagaggagatgtccagtgtcctcaggaagatgagatctgctggtac 322 |||||||||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 310 agaagaagagagaggagatgatgggcgtcctcaggaagatgagatcggctggtac 364
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 242 bits (122), Expect = 1e-60 Identities = 176/194 (90%) Strand = Plus / Plus Query: 117 accaagagggtgcatttcgttaggagcttgatcagggaggttgctgggtttgctccatat 176 |||||||||||| || || |||| ||||||||||||||||||||| |||||||| ||| Sbjct: 41641 accaagagggtgacctttgtcaggaacttgatcagggaggttgctggatttgctccctat 41700 Query: 177 gagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcg 236 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 41701 gagaagcgtatcactgagcttctcaaagttggcaaggacaagcgtgcactgaaggtggca 41760 Query: 237 aagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtc 296 ||| ||||| | ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 41761 aagagaaagcttggcacccacaagagggccaagaagaagagagaggagatggctggtgtc 41820 Query: 297 ctcaggaagatgag 310 |||||||||||||| Sbjct: 41821 ctcaggaagatgag 41834 Score = 137 bits (69), Expect = 5e-29 Identities = 94/101 (93%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||| | ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 40848 tggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtca 40907 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaagggg 110 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 40908 ccaagcgcgagctgccgcctcgcccgtccgaccgcaagggg 40948 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 327 accgagaagaagaagtagagtatc-ccaagctcgtgaagttaatggcaat 375 |||||||||||||| ||||||||| ||||| || |||||| |||||||| Sbjct: 42408 accgagaagaagaaatagagtatctccaagttcatgaagtccatggcaat 42457
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 242 bits (122), Expect = 1e-60 Identities = 176/194 (90%) Strand = Plus / Plus Query: 117 accaagagggtgcatttcgttaggagcttgatcagggaggttgctgggtttgctccatat 176 |||||||||||| || || |||| ||||||||||||||||||||| |||||||| ||| Sbjct: 22452234 accaagagggtgacctttgtcaggaacttgatcagggaggttgctggatttgctccctat 22452293 Query: 177 gagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcg 236 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 22452294 gagaagcgtatcactgagcttctcaaagttggcaaggacaagcgtgcactgaaggtggca 22452353 Query: 237 aagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtc 296 ||| ||||| | ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22452354 aagagaaagcttggcacccacaagagggccaagaagaagagagaggagatggctggtgtc 22452413 Query: 297 ctcaggaagatgag 310 |||||||||||||| Sbjct: 22452414 ctcaggaagatgag 22452427 Score = 137 bits (69), Expect = 5e-29 Identities = 94/101 (93%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||| | ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 22451441 tggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtca 22451500 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaagggg 110 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 22451501 ccaagcgcgagctgccgcctcgcccgtccgaccgcaagggg 22451541 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 327 accgagaagaagaagtagagtatc-ccaagctcgtgaagttaatggcaat 375 |||||||||||||| ||||||||| ||||| || |||||| |||||||| Sbjct: 22453001 accgagaagaagaaatagagtatctccaagttcatgaagtccatggcaat 22453050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 10764308 gcgcgagctgccgccgcgccc 10764328
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 176 bits (89), Expect = 6e-41 Identities = 173/201 (86%) Strand = Plus / Minus Query: 110 gaaaggtaccaagagggtgcatttcgttaggagcttgatcagggaggttgctgggtttgc 169 |||| |||||||||| ||| |||| || ||| ||||||| |||||||||| || ||||| Sbjct: 36077563 gaaaagtaccaagagagtgaattttgtcaggggcttgattagggaggttgtgggatttgc 36077504 Query: 170 tccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaa 229 |||||||||||| || |||||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 36077503 tccatatgagaaacgaatcactgagcttctgaaggttggaaaggacaagcgtgcactgaa 36077444 Query: 230 ggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatgtc 289 ||| || ||| ||||| | || ||||||||||| || ||||||||||||||||||||| | Sbjct: 36077443 ggtcgctaagagaaagctcggtacccacaagagagcaaagaagaagagagaggagatggc 36077384 Query: 290 cagtgtcctcaggaagatgag 310 ||||| ||||||||||||| Sbjct: 36077383 gggtgtcatcaggaagatgag 36077363 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 6 cgccctggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgt 64 |||| |||| ||| ||||||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 36078719 cgccatggcgccgccgcagcccaagtcggggctcttcgtcggcatcaacaagggccacgt 36078660 Query: 65 tgtcaccaagcgcgagctgccgccgcgcccgtccgaccgcaagggg 110 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 36078659 cgtcaccaagcgcgagctgccacctcgcccgtccgaccgcaagggg 36078614
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 176 bits (89), Expect = 6e-41 Identities = 173/201 (86%) Strand = Plus / Minus Query: 110 gaaaggtaccaagagggtgcatttcgttaggagcttgatcagggaggttgctgggtttgc 169 |||| |||||||||| ||| |||| || ||| ||||||| |||||||||| || ||||| Sbjct: 90288 gaaaagtaccaagagagtgaattttgtcaggggcttgattagggaggttgtgggatttgc 90229 Query: 170 tccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaa 229 |||||||||||| || |||||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 90228 tccatatgagaaacgaatcactgagcttctgaaggttggaaaggacaagcgtgcactgaa 90169 Query: 230 ggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatgtc 289 ||| || ||| ||||| | || ||||||||||| || ||||||||||||||||||||| | Sbjct: 90168 ggtcgctaagagaaagctcggtacccacaagagagcaaagaagaagagagaggagatggc 90109 Query: 290 cagtgtcctcaggaagatgag 310 ||||| ||||||||||||| Sbjct: 90108 gggtgtcatcaggaagatgag 90088 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 6 cgccctggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgt 64 |||| |||| ||| ||||||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 91444 cgccatggcgccgccgcagcccaagtcggggctcttcgtcggcatcaacaagggccacgt 91385 Query: 65 tgtcaccaagcgcgagctgccgccgcgcccgtccgaccgcaagggg 110 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 91384 cgtcaccaagcgcgagctgccacctcgcccgtccgaccgcaagggg 91339
>gb|BT013173.1| Lycopersicon esculentum clone 134246F, mRNA sequence Length = 553 Score = 143 bits (72), Expect = 8e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 147 atcagggaggttgctgggtttgctccatatgagaagcgtatcactgagcttctcaaggtt 206 ||||| || |||||||| |||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 177 atcagagaagttgctggatttgctccatatgagaagaggatcactgagcttctcaaagtt 236 Query: 207 ggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgggcacccacaagagggcc 266 || ||||| |||||||| ||||||| || ||| | |||||||| || ||||||||||| Sbjct: 237 ggaaaggacaagcgtgccttgaaggtagccaagaggaagttgggtactcacaagagggca 296 Query: 267 aagaagaagagagaggagatgtccagtgtcctcaggaagatgag 310 |||| ||||||||| |||||||| ||||| ||| | |||||||| Sbjct: 297 aagaggaagagagaagagatgtctagtgttctccgcaagatgag 340
>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence Length = 108159 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 119 caagagggtgcatttcgttaggagcttgatcagggaggttgctgggtttgctccatatga 178 |||||||||||| || || |||| | | ||||| ||||||||||||||||| || ||||| Sbjct: 21883 caagagggtgcactttgtgaggaacctcatcagagaggttgctgggtttgcaccttatga 21824 Query: 179 gaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaa 238 ||||||||| |||||| | ||||||||||| || || ||| | || || ||||| || || Sbjct: 21823 gaagcgtataactgagttgctcaaggttggaaaagacaagagggcgcttaaggttgcaaa 21764 Query: 239 gcgaaagttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtcct 298 | ||||| | || ||||||||| | || ||||||||||||||||||||||| | |||||| Sbjct: 21763 gagaaagcttggaacccacaagcgtgcaaagaagaagagagaggagatgtctaatgtcct 21704 Query: 299 caggaagatgag 310 |||||||||||| Sbjct: 21703 caggaagatgag 21692
>dbj|AK111268.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F09, full insert sequence Length = 724 Score = 137 bits (69), Expect = 5e-29 Identities = 94/101 (93%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 11 tggctccgtcgcagccca-gtcgggcctcttcgtgggcatcaacaagggccacgttgtca 69 |||| ||||||||||| | ||| || ||||||||||||||||||||||||||||| |||| Sbjct: 159 tggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtca 218 Query: 70 ccaagcgcgagctgccgccgcgcccgtccgaccgcaagggg 110 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 219 ccaagcgcgagctgccgcctcgcccgtccgaccgcaagggg 259
>ref|NM_129316.2| Arabidopsis thaliana structural constituent of ribosome AT2G37600 mRNA, complete cds Length = 545 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | ||||||||||||||||||||||| || || ||||||||||| Sbjct: 198 gctccttatgagaagagaatcactgagcttctcaaggttgggaaagacaagcgtgctctt 257 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 258 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 317 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 318 tctagtgttctccgcaagatgag 340
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Minus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | ||||||||||||||||||||||| || || ||||||||||| Sbjct: 30801 gctccttatgagaagagaatcactgagcttctcaaggttgggaaagacaagcgtgctctt 30742 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 30741 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 30682 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 30681 tctagtgttctccgcaagatgag 30659
>gb|AY060496.1| Arabidopsis thaliana At2g37600/F13M22.10 mRNA, complete cds Length = 342 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | ||||||||||||||||||||||| || || ||||||||||| Sbjct: 160 gctccttatgagaagagaatcactgagcttctcaaggttgggaaagacaagcgtgctctt 219 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 220 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 279 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 280 tctagtgttctccgcaagatgag 302
>gb|AY052221.1| Arabidopsis thaliana At2g37600/F13M22.10 mRNA, complete cds Length = 523 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | ||||||||||||||||||||||| || || ||||||||||| Sbjct: 193 gctccttatgagaagagaatcactgagcttctcaaggttgggaaagacaagcgtgctctt 252 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 253 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 312 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 313 tctagtgttctccgcaagatgag 335
>emb|BX821546.1|CNS0AABC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 515 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | ||||||||||||||||||||||| || || ||||||||||| Sbjct: 168 gctccttatgagaagagaatcactgagcttctcaaggttgggaaagacaagcgtgctctt 227 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 228 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 287 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 288 tctagtgttctccgcaagatgag 310
>gb|U47095.1|DCU47095 Daucus carota putative ribosomal protein mRNA, somatic embryo clone Gea42, partial cds Length = 528 Score = 123 bits (62), Expect = 7e-25 Identities = 119/137 (86%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 156 gttgctgggtttgctccatatgagaagcgtatcactgagcttctcaaggttggcaaggat 215 |||||||| ||| |||| ||||||||| | || |||||||| ||||| ||||| || ||| Sbjct: 164 gttgctggttttnctccgtatgagaagaggattactgagctgctcaaagttggaaaagat 223 Query: 216 aagcgtgctctgaaggtg-gcgaagcgaaagttgggcacccacaagagggccaagaagaa 274 ||||||||| |||| ||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 224 aagcgtgctttgaaagtgcgccaagagaaagttgggcactcacaagagagcaaagaagaa 283 Query: 275 gagagaggagatgtcca 291 ||||||||||||||||| Sbjct: 284 gagagaggagatgtcca 300
>gb|AY086261.1| Arabidopsis thaliana clone 23114 mRNA, complete sequence Length = 542 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||||||||||| || || || ||||||||||| Sbjct: 198 gctccttatgagaagagaatcactgagcttctcaaggtagggaaagacaagcgtgctctt 257 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| || |||||||| || |||| |||||||||||||||| Sbjct: 258 aaggttgctaagaggaagttgggtactcacaagagagctaagaggaagagagaggagatg 317 Query: 288 tccagtgtcctcaggaagatgag 310 || ||||| ||| | |||||||| Sbjct: 318 tctagtgttctccgcaagatgag 340
>gb|AF401680.1|AF401680 Orobanche cumana putative 60S ribosomal protein L36 mRNA, partial cds Length = 497 Score = 113 bits (57), Expect = 7e-22 Identities = 115/133 (86%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 156 gttgctgggtttgctccatatgagaagcgtatcactgagcttctcaaggttggcaaggat 215 |||||||||||||| || ||||||||| | |||||||||||||| || || || ||||| Sbjct: 72 gttgctgggtttgccccttatgagaagaggatcactgagcttcttaaagtcggaaaggac 131 Query: 216 aagcgtgctctgaaggt-ggcgaagcgaaagttgggcacccacaagagggccaagaagaa 274 ||||||||||| ||||| || ||| |||| |||||||||| |||||| || |||||||| Sbjct: 132 aagcgtgctcttaaggtacgccaagagaaaattgggcacccccaagagagcaaagaagaa 191 Query: 275 gagagaggagatg 287 ||||||||||||| Sbjct: 192 gagagaggagatg 204
>emb|BX820780.1|CNS0A9P3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZG12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 482 Score = 113 bits (57), Expect = 7e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 186 atcactgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaag 245 ||||||||||||||||||||||| || || ||||||||||| ||||| || ||| | ||| Sbjct: 215 atcactgagcttctcaaggttgggaaagacaagcgtgctcttaaggttgctaagaggaag 274 Query: 246 ttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaag 305 ||||| || |||||||| || |||| |||||||||||||||||| ||||| ||| | ||| Sbjct: 275 ttgggtactcacaagagagctaagaggaagagagaggagatgtctagtgttctccgcaag 334 Query: 306 atgag 310 ||||| Sbjct: 335 atgag 339
>ref|NM_001035778.1| Arabidopsis thaliana structural constituent of ribosome AT3G53740 transcript variant AT3G53740.3 mRNA, complete cds Length = 579 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 206 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 265 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 266 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 325 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 326 tccagtgttctccgcaagatgaggtctg 353
>ref|NM_180366.2| Arabidopsis thaliana structural constituent of ribosome AT3G53740 transcript variant AT3G53740.2 mRNA, complete cds Length = 598 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 210 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 269 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 270 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 329 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 330 tccagtgttctccgcaagatgaggtctg 357
>gb|AY081579.1| Arabidopsis thaliana 60S ribosomal protein L36-like protein (F5K20.4) mRNA, complete cds Length = 485 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 160 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 219 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 220 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 279 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 280 tccagtgttctccgcaagatgaggtctg 307
>gb|AY062791.1| Arabidopsis thaliana 60S RIBOSOMAL PROTEIN L36 homolog (F5K20.4) mRNA, complete cds Length = 558 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 210 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 269 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 270 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 329 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 330 tccagtgttctccgcaagatgaggtctg 357
>emb|BX822929.1|CNS0A75W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 111 bits (56), Expect = 3e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 165 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 224 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 225 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 284 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 285 tccagtgttctccgcaagatgaggtctg 312
>gb|AY310777.1| Nicotiana benthamiana clone 8-287 unknown mRNA Length = 457 Score = 109 bits (55), Expect = 1e-20 Identities = 154/188 (81%) Strand = Plus / Plus Query: 123 agggtgcatttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaag 182 ||||| |||||||| || ||| | ||||| || |||||||| ||||| |||||| ||||| Sbjct: 130 agggtccatttcgtaagaagcctcatcagagaagttgctggatttgcaccatatnagaag 189 Query: 183 cgtatcactgagcttctcaaggttggcaaggataagcgtgctctgaaggtggcgaagcga 242 | || |||||||| || | |||||| ||||| ||||| ||| ||||||| || ||| | Sbjct: 190 agaattactgagctgcttanggttggaaaggacaagcgggctttgaaggtagccaagagg 249 Query: 243 aagttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctcagg 302 |||||||| || |||||||| || |||||||||||||||||||| || || || ||| | Sbjct: 250 aagttgggtactcacaagagagcaaagaagaagagagaggagatntcaagcgttctccgc 309 Query: 303 aagatgag 310 |||||||| Sbjct: 310 aagatgag 317
>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20 Length = 119407 Score = 109 bits (55), Expect = 1e-20 Identities = 121/143 (84%) Strand = Plus / Minus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 16719 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 16660 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 16659 aaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggagatg 16600 Query: 288 tccagtgtcctcaggaagatgag 310 |||||||| ||| | |||||||| Sbjct: 16599 tccagtgttctccgcaagatgag 16577
>emb|BX822668.1|CNS0A7SZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 103 bits (52), Expect = 7e-19 Identities = 124/148 (83%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || || |||||||| Sbjct: 187 gctccctatgagaagagaatcactgagcttttgaaggttggtaaagacaaacgtgctctt 246 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 ||||| || ||| | |||||||| ||| ||||||| |||||| ||||||||||||||| Sbjct: 247 aaggttgctaagaggaagttgggaacctacaagagagccaagcgaaagagagaggagatg 306 Query: 288 tccagtgtcctcaggaagatgagatctg 315 |||||||| ||| | |||||||| |||| Sbjct: 307 tccagtgttctccgcaagatgaggtctg 334
>ref|NM_120323.2| Arabidopsis thaliana structural constituent of ribosome AT5G02450 mRNA, complete cds Length = 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 228 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 287 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 288 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 347 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 348 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 405
>gb|AF339702.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g02450) mRNA, complete cds Length = 377 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 148 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 207 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 208 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 267 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 268 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 325
>gb|AF326882.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g02450) mRNA, complete cds Length = 528 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 190 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 249 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 250 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 309 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 310 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 367
>gb|AY133624.1| Arabidopsis thaliana AT5g02450/T22P11_40 mRNA, complete cds Length = 327 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 148 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 207 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 208 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 267 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 268 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 325
>gb|AY057706.1| Arabidopsis thaliana AT5g02450/T22P11_40 mRNA, complete cds Length = 504 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 190 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 249 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 250 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 309 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 310 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 367
>gb|AF324687.2|AF324687 Arabidopsis thaliana AT5g02450 (AT5g02450/T22P11_40) mRNA, complete cds Length = 512 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 190 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 249 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 250 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 309 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 310 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 367
>emb|BX833475.1|CNS09Z2B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 597 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 156 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 215 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 216 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 275 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 276 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 333
>emb|BX830576.1|CNS09YOA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 537 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 156 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 215 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 216 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 275 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 |||||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 276 tccagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 333
>gb|AY087041.1| Arabidopsis thaliana clone 30903 mRNA, complete sequence Length = 541 Score = 87.7 bits (44), Expect = 4e-14 Identities = 145/178 (81%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 228 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 287 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 288 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 347 Query: 288 tccagtgtcctcaggaagatgagatctgctggtactgg---aaccgagaagaagaagt 342 || ||||| ||| | |||||||| |||| |||| |||| | ||||||||||||||| Sbjct: 348 tctagtgttctccgcaagatgaggtctggtggtgctggtgcatccgagaagaagaagt 405
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project) Length = 96424 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 15026 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 15085 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 15086 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 15145 Query: 288 tccagtgtcctcaggaagatgag 310 |||||||| ||| | |||||||| Sbjct: 15146 tccagtgttctccgcaagatgag 15168
>emb|AL162874.1|ATT1E22 Arabidopsis thaliana DNA chromosome 5, BAC clone T1E22 (ESSA project) Length = 96575 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttggcaaggataagcgtgctctg 227 ||||| ||||||||| | |||||||||||| | |||||||| || || ||| | ||||| Sbjct: 83045 gctccctatgagaagaggatcactgagcttttgaaggttggtaaagacaagagagctctt 83104 Query: 228 aaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggagatg 287 || || || |||||||||||||| || |||||||| || || ||||||||||||||| Sbjct: 83105 aaagttgccaagcgaaagttgggaactcacaagagagctaaacgaaagagagaggagatg 83164 Query: 288 tccagtgtcctcaggaagatgag 310 |||||||| ||| | |||||||| Sbjct: 83165 tccagtgttctccgcaagatgag 83187
>gb|DQ207665.1| Zea mays cultivar inbred line Mo17 IDP177 marker Length = 607 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 216 aagcgtgctctgaaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaag 275 |||||||| |||||| | || ||| ||||| | || || ||||||||||| ||||||||| Sbjct: 606 aagcgtgccctgaagcttgctaagagaaagcttggaactcacaagagggcaaagaagaag 547 Query: 276 agagaggagatgtccagtgtcctcaggaagatgag 310 |||||||||||| | | ||||||||||||||||| Sbjct: 546 agagaggagatggcgggcgtcctcaggaagatgag 512
>ref|NM_115234.2| Arabidopsis thaliana structural constituent of ribosome AT3G53740 transcript variant AT3G53740.1 mRNA, complete cds Length = 557 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 226 tgaaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggaga 285 ||||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 257 tgaaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggaga 316 Query: 286 tgtccagtgtcctcaggaagatgagatctg 315 |||||||||| ||| | |||||||| |||| Sbjct: 317 tgtccagtgttctccgcaagatgaggtctg 346 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttg 207 ||||| ||||||||| | |||||||||||| | ||||||| Sbjct: 226 gctccctatgagaagagaatcactgagcttttgaaggttg 265
>gb|AY086677.1| Arabidopsis thaliana clone 267357 mRNA, complete sequence Length = 546 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 226 tgaaggtggcgaagcgaaagttgggcacccacaagagggccaagaagaagagagaggaga 285 ||||||| || ||| | |||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 258 tgaaggttgctaagaggaagttgggaacccacaagagagccaagcgaaagagagaggaga 317 Query: 286 tgtccagtgtcctcaggaagatgagatctg 315 |||||||||| ||| | |||||||| |||| Sbjct: 318 tgtccagtgttctccgcaagatgaggtctg 347 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 168 gctccatatgagaagcgtatcactgagcttctcaaggttg 207 ||||| ||||||||| | |||||||||||| | ||||||| Sbjct: 227 gctccctatgagaagagaatcactgagcttttgaaggttg 266
>gb|DQ207664.1| Zea mays cultivar B73 IDP177 marker Length = 777 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 255 cacaagagggccaagaagaagagagaggagatgtccagtgtcctcaggaagatgag 310 ||||||||||| ||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 741 cacaagagggcaaagaagaagagagaggagatggcgggcgtcctcaggaagatgag 686
>dbj|AB083110.1| Allium cepa L36 mRNA for 60S ribosomal protein L36 homolog, complete cds Length = 438 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gaaagttgggcacccacaagagggccaagaagaagagagaggagatgtccagtgtcctca 300 |||||||||| ||||||||||| || |||| |||||| ||||||||||| | |||||| Sbjct: 134 gaaagttgggaacccacaagagagctaagaggaagagggaggagatgtcaaatgtccttc 193 Query: 301 ggaagatgagatctgctggt 320 | |||||||| ||||||||| Sbjct: 194 gaaagatgaggtctgctggt 213
>dbj|AP006671.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39I14, TM0368c, complete sequence Length = 71495 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 123 agggtgcatttcgttaggagcttgatcagggaggttgctgggtttgctccatatgagaag 182 |||||||| || || |||||| | ||| | || |||||||||||||| || ||||||||| Sbjct: 9613 agggtgcactttgtaaggagcctcatccgtgaagttgctgggtttgcaccttatgagaag 9672 Query: 183 cgtatcactgagcttctcaaggttggcaaggataag 218 ||||| |||||| | || |||||||| || |||||| Sbjct: 9673 cgtataactgagttgctgaaggttggaaaagataag 9708
>dbj|AB045113.1| Enteromorpha compressa EcRL36 mRNA for ribosomal protein L36, complete cds Length = 555 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 201 aaggttggcaaggataagcgtgctctgaaggtggcgaagcgaaagttgggcacccacaag 260 |||||||| ||||| ||||||||| ||||| || ||||| || |||||||| |||| | Sbjct: 190 aaggttggtaaggacaagcgtgctttgaagatgtgcaagcgcaaattgggcacacacatg 249 Query: 261 agggccaagaagaagagagaggagatg 287 | | |||||||||||| ||||||||| Sbjct: 250 cgcggcaagaagaagagggaggagatg 276
>ref|XM_531768.2| PREDICTED: Canis familiaris similar to RAN-binding protein 2-like 1 isoform 1 (LOC474539), mRNA Length = 6708 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 531 ctttttcattatctgttagctt 552 |||||||||||||||||||||| Sbjct: 5194 ctttttcattatctgttagctt 5173
>emb|AJ427420.1|CGI427420 Crassostrea gigas partial mRNA for bone morphogenic protein type 2 receptor (BMP-R2 gene) Length = 4426 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 247 tgggcacccacaagagggccaa 268 |||||||||||||||||||||| Sbjct: 835 tgggcacccacaagagggccaa 856
>gb|AE005968.1| Caulobacter crescentus CB15 section 294 of 359 of the complete genome Length = 11996 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cgcgcccgtccgaccgcaaggg 109 |||||||||||||||||||||| Sbjct: 7615 cgcgcccgtccgaccgcaaggg 7636
>gb|AY155563.1| Aedes polynesiensis late trypsin gene, complete cds Length = 4397 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gccaagaagaagagagaggaga 285 |||||||||||||||||||||| Sbjct: 1423 gccaagaagaagagagaggaga 1444
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 148908 gcgcgagctgccgccgcgccc 148928
>emb|CR848666.4| Zebrafish DNA sequence from clone DKEY-56F14 in linkage group 16, complete sequence Length = 106065 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 gctcgtgaagttaatggcaat 375 ||||||||||||||||||||| Sbjct: 90321 gctcgtgaagttaatggcaat 90301
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 1788915 gcgcgagctgccgccgcgccc 1788935
>gb|AC102133.27| Mus musculus chromosome 1, clone RP23-241J21, complete sequence Length = 203349 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ggccaagaagaagagagagga 283 ||||||||||||||||||||| Sbjct: 75950 ggccaagaagaagagagagga 75970
>gb|AC162170.5| Mus musculus chromosome 1, clone RP23-240G10, complete sequence Length = 159806 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ggccaagaagaagagagagga 283 ||||||||||||||||||||| Sbjct: 9754 ggccaagaagaagagagagga 9734
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 ttttcttggtttgctttttca 538 ||||||||||||||||||||| Sbjct: 168098 ttttcttggtttgctttttca 168078
>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagagaggaga 285 |||||||| ||||||||||||||||||| Sbjct: 802 caagagggaaaagaagaagagagaggaga 830
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 7368 gcgcgagctgccgccgcgccc 7388
>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04, complete sequence Length = 133121 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 40489 gcgcgagctgccgccgcgccc 40509
>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine K203, and chemokine ah294 genes, complete cds Length = 112034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 agagaggagatgtccagtgtc 296 ||||||||||||||||||||| Sbjct: 100083 agagaggagatgtccagtgtc 100063
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 1788915 gcgcgagctgccgccgcgccc 1788935
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcgcgagctgccgccgcgccc 94 ||||||||||||||||||||| Sbjct: 1788866 gcgcgagctgccgccgcgccc 1788886
>ref|XM_509389.1| PREDICTED: Pan troglodytes similar to KIAA0614 protein (LOC452263), mRNA Length = 418 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 210 tcgcagcccagtcgggcctc 229
>ref|NM_138854.1| Rattus norvegicus solute carrier family 38, member 5 (Slc38a5), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 caagagggccaagaagaaga 276 |||||||||||||||||||| Sbjct: 376 caagagggccaagaagaaga 357
>gb|BC040274.1| Mus musculus coagulation factor XIII, A1 subunit, mRNA (cDNA clone MGC:7202 IMAGE:3482233), complete cds Length = 3871 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1537 caagaaggccaagaagaagagaga 1560
>gb|BC011073.1| Mus musculus coagulation factor XIII, A1 subunit, mRNA (cDNA clone IMAGE:4013001), containing frame-shift errors Length = 2988 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 627 caagaaggccaagaagaagagaga 650
>ref|XM_361587.1| Magnaporthe grisea 70-15 hypothetical protein (MG04061.4) partial mRNA Length = 5295 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gagcttgatcagggaggttg 159 |||||||||||||||||||| Sbjct: 844 gagcttgatcagggaggttg 825
>gb|AY391945.1| Hypocrea straminea strain G.J.S. 02-84 RNA polymerase II subunit (RPB2) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gggcatcaacaagggccacgttgt 67 ||||||||||||||||||| |||| Sbjct: 549 gggcatcaacaagggccaccttgt 572
>gb|AY391925.1| Hypocrea lixii strain G.J.S. 90-22 RNA polymerase II subunit (RPB2) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gggcatcaacaagggccacgttgt 67 ||||||||||||||||||| |||| Sbjct: 549 gggcatcaacaagggccaccttgt 572
>gb|AY391900.1| Hypocrea catoptron strain G.J.S. 02-76 RNA polymerase II subunit (RPB2) gene, partial cds Length = 904 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gggcatcaacaagggccacgttgt 67 ||||||||||||||||||| |||| Sbjct: 549 gggcatcaacaagggccaccttgt 572
>ref|NM_028784.2| Mus musculus coagulation factor XIII, A1 subunit (F13a1), mRNA Length = 3871 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1537 caagaaggccaagaagaagagaga 1560
>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence Length = 183477 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ccagtgtcctcaggaagatg 308 |||||||||||||||||||| Sbjct: 150401 ccagtgtcctcaggaagatg 150420
>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence Length = 116591 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ttttcttggtttgctttttc 537 |||||||||||||||||||| Sbjct: 58406 ttttcttggtttgctttttc 58425
>emb|AL583861.9| Human DNA sequence from clone RP11-314E19 on chromosome 6, complete sequence Length = 72356 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 caaagcctggctttcacctt 516 |||||||||||||||||||| Sbjct: 53328 caaagcctggctttcacctt 53347
>emb|AL031667.21|HS620E11 Human DNA sequence from clone RP4-620E11 on chromosome 20q11.2-12 Contains the 3' end of the LPIN3 gene for lipin 3, the C20orf130 gene, a novel pseudogene, the 3' end of the CHD6 gene for chromodomain helicase DNA binding protein 6, a lymphocyte antigen 6 complex locus H (LY6H) pseudogene and a CpG island, complete sequence Length = 142520 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 agagggccaagaagaagaga 278 |||||||||||||||||||| Sbjct: 141379 agagggccaagaagaagaga 141360
>emb|BX000351.17| Mouse DNA sequence from clone RP23-313I4 on chromosome 11, complete sequence Length = 215123 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttctcaaggttggcaaggat 215 |||||||||||||||||||| Sbjct: 22079 ttctcaaggttggcaaggat 22098
>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 203827 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tttgctttttcattatctgt 546 |||||||||||||||||||| Sbjct: 121169 tttgctttttcattatctgt 121188
>dbj|AB225632.1| Aspergillus oryzae cDNA, contig sequence: AoEST2487 Length = 1178 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 ttcatgtggcattcattgcc 570 |||||||||||||||||||| Sbjct: 831 ttcatgtggcattcattgcc 812
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 ttcatgtggcattcattgcc 570 |||||||||||||||||||| Sbjct: 3391853 ttcatgtggcattcattgcc 3391834
>gb|AF276870.1| Rattus norvegicus amino acid transporter system N2 mRNA, complete cds Length = 1891 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 caagagggccaagaagaaga 276 |||||||||||||||||||| Sbjct: 376 caagagggccaagaagaaga 357
>ref|XM_946204.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 10 (FLJ30092), mRNA Length = 10978 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_946203.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 9 (FLJ30092), mRNA Length = 9738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_942665.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 8 (FLJ30092), mRNA Length = 11197 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_933574.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 7 (FLJ30092), mRNA Length = 9117 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_933569.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 6 (FLJ30092), mRNA Length = 10975 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_933565.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 5 (FLJ30092), mRNA Length = 9735 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_933560.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 3 (FLJ30092), mRNA Length = 10664 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_933557.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 2 (FLJ30092), mRNA Length = 8061 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>ref|XM_497354.2| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 1 (FLJ30092), mRNA Length = 11197 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 204 tcgcagcccagtcgggcctc 223
>dbj|AK165311.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012A13 product:coagulation factor XIII, alpha subunit, full insert sequence Length = 3206 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1547 caagaaggccaagaagaagagaga 1570
>dbj|AK036403.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830005M20 product:FACTOR XIIIA homolog [Rattus norvegicus], full insert sequence Length = 3206 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1547 caagaaggccaagaagaagagaga 1570
>dbj|AK049092.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230098E01 product:FACTOR XIIIA homolog [Rattus norvegicus], full insert sequence Length = 3521 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1547 caagaaggccaagaagaagagaga 1570
>dbj|AK030914.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830453E21 product:coagulation factor XIII, alpha subunit, full insert sequence Length = 3855 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 1521 caagaaggccaagaagaagagaga 1544
>dbj|AK004764.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200014I03 product:similar to BA525O21.1 (COAGULATION FACTOR XIII, A1 POLYPEPTIDE) (FRAGMENT) [Homo sapiens], full insert sequence Length = 2791 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 caagagggccaagaagaagagaga 280 ||||| |||||||||||||||||| Sbjct: 468 caagaaggccaagaagaagagaga 491
>gb|AC097110.1| Homo sapiens BAC clone RP11-51P8 from 4, complete sequence Length = 153480 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 ttgttttcttggtttgctttttca 538 |||||||||||||||| ||||||| Sbjct: 91205 ttgttttcttggtttgttttttca 91182
>dbj|AB014514.3| Homo sapiens mRNA for KIAA0614 protein, partial cds Length = 11211 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 221 tcgcagcccagtcgggcctc 240
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccaagcgcgagctgccgccg 89 |||||||||||||||||||| Sbjct: 5402072 ccaagcgcgagctgccgccg 5402053
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgaaggtggcgaagcgaaa 244 |||||||||||||||||||| Sbjct: 654653 ctgaaggtggcgaagcgaaa 654672
>dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-794G24, complete sequence Length = 181439 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 aagagggccaagaagaagagagaggaga 285 ||||| |||||||||| ||||||||||| Sbjct: 57899 aagagagccaagaagaggagagaggaga 57872
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccaagcgcgagctgccgccg 89 |||||||||||||||||||| Sbjct: 5726589 ccaagcgcgagctgccgccg 5726570
>gb|AC004031.1|AC004031 Homo sapiens 12q24 PAC RPCI1-261P5 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 74507 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcgcagcccagtcgggcctc 38 |||||||||||||||||||| Sbjct: 6629 tcgcagcccagtcgggcctc 6648
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctgccgccgcgcccgtccga 100 |||||||||||||||||||| Sbjct: 1474338 ctgccgccgcgcccgtccga 1474319
>dbj|AP003108.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-286N22, complete sequence Length = 209572 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 aagagggccaagaagaagagagaggaga 285 ||||| |||||||||| ||||||||||| Sbjct: 136233 aagagagccaagaagaggagagaggaga 136206 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,400,807 Number of Sequences: 3902068 Number of extensions: 6400807 Number of successful extensions: 127619 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127125 Number of HSP's gapped (non-prelim): 470 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
