ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalg09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482576.1| Oryza sativa (japonica cultivar-group), mRNA 250 5e-63
2dbj|AK065062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
4dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
5gb|AY104515.1| Zea mays PCO140907 mRNA sequence 52 0.002
6ref|NM_101291.1| Arabidopsis thaliana hydrolase AT1G14250 mRNA, ... 42 2.2
7ref|XM_628938.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
8gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, com... 42 2.2
9gb|BT010550.1| Arabidopsis thaliana At1g14250 gene, complete cds 42 2.2
10gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, com... 42 2.2
11gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, compl... 42 2.2
12emb|BX821988.1|CNS0A93F Arabidopsis thaliana Full-length cDNA Co... 42 2.2
13gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complet... 42 2.2
14dbj|AK175519.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.2
15dbj|AK175135.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.2
16emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chro... 42 2.2
17ref|NM_112065.2| Arabidopsis thaliana catalytic AT3G12290 mRNA, ... 40 8.8
18gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map... 40 8.8
19gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, com... 40 8.8
20ref|XM_763484.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 8.8
21gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, c... 40 8.8
22gb|AC114600.4| Mus musculus chromosome 5, clone RP23-332O18, com... 40 8.8
23emb|AL161657.22| Human DNA sequence from clone RP11-46O3 on chro... 40 8.8
24gb|AC009652.14| Homo sapiens chromosome 11, clone RP11-428C19, c... 40 8.8
25emb|CR353395.1| Gallus gallus finished cDNA, clone ChEST491o4 40 8.8
26emb|BX824723.1|CNS0A5N1 Arabidopsis thaliana Full-length cDNA Co... 40 8.8
27emb|BX824645.1|CNS0A5KE Arabidopsis thaliana Full-length cDNA Co... 40 8.8
28gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Can... 40 8.8
29gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, co... 40 8.8
30gb|BT004612.1| Arabidopsis thaliana At3g12290 gene, complete cds 40 8.8
31gb|AY085538.1| Arabidopsis thaliana clone 156450 mRNA, complete ... 40 8.8
32emb|BX927109.13| Zebrafish DNA sequence from clone CH211-80D23 i... 40 8.8
33emb|BX936417.8| Zebrafish DNA sequence from clone DKEY-231D7 in ... 40 8.8
34emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chro... 40 8.8
35emb|AL356799.3|CNS05TDH Human chromosome 14 DNA sequence BAC R-6... 40 8.8
36emb|AL590456.5| Human DNA sequence from clone RP11-298M2 on chro... 40 8.8 
>ref|XM_482576.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2052

 Score =  250 bits (126), Expect = 5e-63
 Identities = 290/344 (84%), Gaps = 3/344 (0%)
 Strand = Plus / Plus

                                                                        
Query: 303  tgctcatgcggttggtaacttctctgagtgtagatctgtggtgagaacattattgcacaa 362
            ||||||||| |||||||||||||| || ||||||||||  |    |||| ||||||| ||
Sbjct: 1134 tgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaa 1193

                                                                        
Query: 363  aggacaagaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatct 422
            ||||  |||||||||||  || ||||| || ||| |||||||||||||||||||||| ||
Sbjct: 1194 aggaagagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagacct 1253

                                                                        
Query: 423  ggaaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttgggctccg 482
             || || | ||| |||||||| ||||||||||||||||| || ||||||||| || | ||
Sbjct: 1254 tgatgggaaatttttagcaacagagaatttctaccatacttccaagttctttaggttgcg 1313

                                                                        
Query: 483  ttcgaaatcttttctttctgatttgatgctggctggggagcaattttgccatggggactg 542
            ||| || ||||||||||||||  ||||||||||||||||| |||||||||  || |||||
Sbjct: 1314 ttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactg 1373

                                                                        
Query: 543  gtcatcaaacataaaaaggaagtaccgttctttcaatgagggggaactgctccttttttg 602
            |   ||||| || |||| | ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1374 g---tcaaagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttg 1430

                                                        
Query: 603  cttctcctcagcgtatattgtggccttactgcatgatgctctaa 646
            ||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 1431 cttttcctcagcatatattgttgctttgctgcatgatactctaa 1474



 Score =  163 bits (82), Expect = 9e-37
 Identities = 187/222 (84%)
 Strand = Plus / Plus

                                                                        
Query: 73   aagttcggcgatatcacatataacctgtacagccacagttttctacatcttggtcagaat 132
            |||||||| |||  ||||||||| |||||||| ||||| |||||||| ||||||||||||
Sbjct: 895  aagttcggtgatgccacatataatctgtacagtcacagctttctacaacttggtcagaat 954

                                                                        
Query: 133  gtagcatatgaatcacttcatgatttgttgagcacacctgcccttgaatcaatgtccaca 192
            || || || |||||||| |||||  || ||||||||||||  | | |||||||| | |||
Sbjct: 955  gttgcgtacgaatcactccatgacatgctgagcacacctgggcataaatcaatggcaaca 1014

                                                                        
Query: 193  catttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgcatg 252
            |||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| ||||
Sbjct: 1015 catttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgcccatg 1074

                                                      
Query: 253  gtgggactagttaaacctcttgctagtgttctcgagtcgaag 294
            | ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 1075 gagggagcagttaaacttcctgccagtgttcttgagtcgaag 1116
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>dbj|AK065062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J16, full
            insert sequence
          Length = 2052

 Score =  250 bits (126), Expect = 5e-63
 Identities = 290/344 (84%), Gaps = 3/344 (0%)
 Strand = Plus / Plus

                                                                        
Query: 303  tgctcatgcggttggtaacttctctgagtgtagatctgtggtgagaacattattgcacaa 362
            ||||||||| |||||||||||||| || ||||||||||  |    |||| ||||||| ||
Sbjct: 1134 tgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaa 1193

                                                                        
Query: 363  aggacaagaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatct 422
            ||||  |||||||||||  || ||||| || ||| |||||||||||||||||||||| ||
Sbjct: 1194 aggaagagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagacct 1253

                                                                        
Query: 423  ggaaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttgggctccg 482
             || || | ||| |||||||| ||||||||||||||||| || ||||||||| || | ||
Sbjct: 1254 tgatgggaaatttttagcaacagagaatttctaccatacttccaagttctttaggttgcg 1313

                                                                        
Query: 483  ttcgaaatcttttctttctgatttgatgctggctggggagcaattttgccatggggactg 542
            ||| || ||||||||||||||  ||||||||||||||||| |||||||||  || |||||
Sbjct: 1314 ttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactg 1373

                                                                        
Query: 543  gtcatcaaacataaaaaggaagtaccgttctttcaatgagggggaactgctccttttttg 602
            |   ||||| || |||| | ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1374 g---tcaaagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttg 1430

                                                        
Query: 603  cttctcctcagcgtatattgtggccttactgcatgatgctctaa 646
            ||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 1431 cttttcctcagcatatattgttgctttgctgcatgatactctaa 1474



 Score =  163 bits (82), Expect = 9e-37
 Identities = 187/222 (84%)
 Strand = Plus / Plus

                                                                        
Query: 73   aagttcggcgatatcacatataacctgtacagccacagttttctacatcttggtcagaat 132
            |||||||| |||  ||||||||| |||||||| ||||| |||||||| ||||||||||||
Sbjct: 895  aagttcggtgatgccacatataatctgtacagtcacagctttctacaacttggtcagaat 954

                                                                        
Query: 133  gtagcatatgaatcacttcatgatttgttgagcacacctgcccttgaatcaatgtccaca 192
            || || || |||||||| |||||  || ||||||||||||  | | |||||||| | |||
Sbjct: 955  gttgcgtacgaatcactccatgacatgctgagcacacctgggcataaatcaatggcaaca 1014

                                                                        
Query: 193  catttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgcatg 252
            |||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| ||||
Sbjct: 1015 catttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgcccatg 1074

                                                      
Query: 253  gtgggactagttaaacctcttgctagtgttctcgagtcgaag 294
            | ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 1075 gagggagcagttaaacttcctgccagtgttcttgagtcgaag 1116
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 5e-32
 Identities = 154/180 (85%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                            
Query: 467      agttctttgggctccgttcgaaatcttttctttctgatttgatgctggctggggagcaat 526
                |||||||| || | ||||| || ||||||||||||||  ||||||||||||||||| |||
Sbjct: 21186131 agttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaat 21186190

                                                                            
Query: 527      tttgccatggggactggtcatcaaacataaaaaggaagtaccgttctttcaatgaggggg 586
                ||||||  || |||||||||   || || |||| | ||||||||||||||||||||||||
Sbjct: 21186191 tttgccgaggagactggtca---aagattaaaaaggagtaccgttctttcaatgaggggg 21186247

                                                                            
Query: 587      aactgctccttttttgcttctcctcagcgtatattgtggccttactgcatgatgctctaa 646
                | ||||| ||||||||||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 21186248 agctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaa 21186307



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                            
Query: 190      acacatttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgc 249
                ||||||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| |
Sbjct: 21184687 acacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgccc 21184746

                                                             
Query: 250      atggtgggactagttaaacctcttgctagtgttctcgagtcgaag 294
                |||| ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 21184747 atggagggagcagttaaacttcctgccagtgttcttgagtcgaag 21184791



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 369      agaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatctggaagg 428
                |||||||||||  || ||||| || ||| |||||||||||||||||||||| || || ||
Sbjct: 21185289 agaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgg 21185348

                                                 
Query: 429      aagattcttagcaaccgagaatttctaccatac 461
                 | ||| |||||||| |||||||||||||||||
Sbjct: 21185349 gaaatttttagcaacagagaatttctaccatac 21185381



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 303      tgctcatgcggttggtaacttctctgagtgtagatctg 340
                ||||||||| |||||||||||||| || ||||||||||
Sbjct: 21184809 tgctcatgctgttggtaacttctccgaatgtagatctg 21184846
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016C11
          Length = 170723

 Score =  147 bits (74), Expect = 5e-32
 Identities = 154/180 (85%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                         
Query: 467   agttctttgggctccgttcgaaatcttttctttctgatttgatgctggctggggagcaat 526
             |||||||| || | ||||| || ||||||||||||||  ||||||||||||||||| |||
Sbjct: 12408 agttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaat 12467

                                                                         
Query: 527   tttgccatggggactggtcatcaaacataaaaaggaagtaccgttctttcaatgaggggg 586
             ||||||  || |||||||||   || || |||| | ||||||||||||||||||||||||
Sbjct: 12468 tttgccgaggagactggtca---aagattaaaaaggagtaccgttctttcaatgaggggg 12524

                                                                         
Query: 587   aactgctccttttttgcttctcctcagcgtatattgtggccttactgcatgatgctctaa 646
             | ||||| ||||||||||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 12525 agctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaa 12584



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                         
Query: 190   acacatttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgc 249
             ||||||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| |
Sbjct: 10964 acacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgccc 11023

                                                          
Query: 250   atggtgggactagttaaacctcttgctagtgttctcgagtcgaag 294
             |||| ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 11024 atggagggagcagttaaacttcctgccagtgttcttgagtcgaag 11068



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 369   agaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatctggaagg 428
             |||||||||||  || ||||| || ||| |||||||||||||||||||||| || || ||
Sbjct: 11566 agaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgg 11625

                                              
Query: 429   aagattcttagcaaccgagaatttctaccatac 461
              | ||| |||||||| |||||||||||||||||
Sbjct: 11626 gaaatttttagcaacagagaatttctaccatac 11658



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 303   tgctcatgcggttggtaacttctctgagtgtagatctg 340
             ||||||||| |||||||||||||| || ||||||||||
Sbjct: 11086 tgctcatgctgttggtaacttctccgaatgtagatctg 11123
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>gb|AY104515.1| Zea mays PCO140907 mRNA sequence
          Length = 706

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 562 aagtaccgttctttcaatgagggggaactgctccttttttgcttctcctcagcgtatatt 621
           |||||| |||||||  |||| ||  ||||||| ||||||||||| |||||||| ||||||
Sbjct: 17  aagtacagttcttttgatgacggacaactgcttcttttttgcttttcctcagcatatatt 76

                             
Query: 622 gtggccttactgcatgat 639
            | ||  |||||||||||
Sbjct: 77  attgctctactgcatgat 94
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>ref|NM_101291.1| Arabidopsis thaliana hydrolase AT1G14250 mRNA, complete cds
          Length = 1467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 425  aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 477
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1094 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1146
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>ref|XM_628938.1| Dictyostelium discoideum hypothetical protein (DDB0192143), partial
           mRNA
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 138 atatgaatcacttcatgattt 158
           |||||||||||||||||||||
Sbjct: 563 atatgaatcacttcatgattt 543
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>gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, complete sequence
          Length = 148599

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ttctacatcttggtcagaatg 133
             |||||||||||||||||||||
Sbjct: 25444 ttctacatcttggtcagaatg 25424
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>gb|BT010550.1| Arabidopsis thaliana At1g14250 gene, complete cds
          Length = 1467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 425  aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 477
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1094 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1146
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>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence
          Length = 181930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ttctacatcttggtcagaatg 133
             |||||||||||||||||||||
Sbjct: 65473 ttctacatcttggtcagaatg 65453
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>gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, complete sequence
          Length = 117864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 509   tgctggctggggagcaatttt 529
             |||||||||||||||||||||
Sbjct: 56883 tgctggctggggagcaatttt 56863
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>emb|BX821988.1|CNS0A93F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL8ZF11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 943

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 581 agggggaactgctccttttttgcttctcc 609
           |||| ||||||||||||||||||| ||||
Sbjct: 424 agggtgaactgctccttttttgctgctcc 396
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>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence
          Length = 176075

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   gatttgatgctggctggggag 522
             |||||||||||||||||||||
Sbjct: 30519 gatttgatgctggctggggag 30539
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>dbj|AK175519.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL21-94-A03
          Length = 1856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 425  aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 477
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1188 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1240
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>dbj|AK175135.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL21-55-D22
          Length = 1856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 425  aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 477
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1188 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1240
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>emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chromosome X, complete
              sequence
          Length = 225435

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 113    ttctacatcttggtcagaatgtagc 137
              |||||||||||| ||||||||||||
Sbjct: 213759 ttctacatcttgatcagaatgtagc 213735
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>ref|NM_112065.2| Arabidopsis thaliana catalytic AT3G12290 mRNA, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tccttgcaccccaaagggat 241
           ||||||||||||||||||||
Sbjct: 530 tccttgcaccccaaagggat 549
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>gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map MAP_LOC, complete
             sequence
          Length = 125813

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 600   ttgcttctcctcagcgtatattgtggccttactgcatgat 639
             ||||||||| |||||||||||  |||| ||||| ||||||
Sbjct: 63789 ttgcttctcttcagcgtatatattggcattacttcatgat 63828
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>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence
          Length = 166093

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tgatttgttgagcacacctg 172
              ||||||||||||||||||||
Sbjct: 126997 tgatttgttgagcacacctg 127016
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>ref|XM_763484.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_76_3986_10585)
            partial mRNA
          Length = 6600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 171  tgcccttgaatcaatgtccacaca 194
            |||||||||||||| |||||||||
Sbjct: 3243 tgcccttgaatcaaagtccacaca 3266
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>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence
          Length = 192819

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tgatttgttgagcacacctg 172
             ||||||||||||||||||||
Sbjct: 55120 tgatttgttgagcacacctg 55139
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>gb|AC114600.4| Mus musculus chromosome 5, clone RP23-332O18, complete sequence
          Length = 203401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tcaatgtccacacatttaat 200
              ||||||||||||||||||||
Sbjct: 130753 tcaatgtccacacatttaat 130734
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>emb|AL161657.22| Human DNA sequence from clone RP11-46O3 on chromosome 20 Contains
            ESTs, STSs and GSSs, complete sequence
          Length = 92132

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 490  tcttttctttctgatttgat 509
            ||||||||||||||||||||
Sbjct: 4719 tcttttctttctgatttgat 4700
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>gb|AC009652.14| Homo sapiens chromosome 11, clone RP11-428C19, complete sequence
          Length = 200823

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    caattttgccatggggactg 542
              ||||||||||||||||||||
Sbjct: 146944 caattttgccatggggactg 146963
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>emb|CR353395.1| Gallus gallus finished cDNA, clone ChEST491o4
          Length = 833

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 582 gggggaactgctcctttttt 601
           ||||||||||||||||||||
Sbjct: 549 gggggaactgctcctttttt 568
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>emb|BX824723.1|CNS0A5N1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH68ZA04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tccttgcaccccaaagggat 241
           ||||||||||||||||||||
Sbjct: 473 tccttgcaccccaaagggat 492
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>emb|BX824645.1|CNS0A5KE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZH12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 984

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tccttgcaccccaaagggat 241
           ||||||||||||||||||||
Sbjct: 442 tccttgcaccccaaagggat 461
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>gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 132501

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    gacaagaggaatgtatatat 384
              ||||||||||||||||||||
Sbjct: 110758 gacaagaggaatgtatatat 110777
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>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence
          Length = 155376

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    caattttgccatggggactg 542
              ||||||||||||||||||||
Sbjct: 136199 caattttgccatggggactg 136180
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>gb|BT004612.1| Arabidopsis thaliana At3g12290 gene, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tccttgcaccccaaagggat 241
           ||||||||||||||||||||
Sbjct: 441 tccttgcaccccaaagggat 460
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>gb|AY085538.1| Arabidopsis thaliana clone 156450 mRNA, complete sequence
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tccttgcaccccaaagggat 241
           ||||||||||||||||||||
Sbjct: 530 tccttgcaccccaaagggat 549
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>emb|BX927109.13| Zebrafish DNA sequence from clone CH211-80D23 in linkage group 18,
             complete sequence
          Length = 169784

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   ctttcaatgagggggaactg 591
             ||||||||||||||||||||
Sbjct: 46795 ctttcaatgagggggaactg 46776
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>emb|BX936417.8| Zebrafish DNA sequence from clone DKEY-231D7 in linkage group 18,
              complete sequence
          Length = 151853

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 572    ctttcaatgagggggaactg 591
              ||||||||||||||||||||
Sbjct: 122554 ctttcaatgagggggaactg 122573
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>emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chromosome X, complete
              sequence
          Length = 238677

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    gtatattgtggccttactgc 634
              ||||||||||||||||||||
Sbjct: 177986 gtatattgtggccttactgc 178005
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>emb|AL356799.3|CNS05TDH Human chromosome 14 DNA sequence BAC R-63P7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160168

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    tctgggagcagcatttgtac 415
              ||||||||||||||||||||
Sbjct: 104392 tctgggagcagcatttgtac 104373
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>emb|AL590456.5| Human DNA sequence from clone RP11-298M2 on chromosome 6, complete
             sequence
          Length = 39938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   aaacataaaaaggaagtacc 568
             ||||||||||||||||||||
Sbjct: 37307 aaacataaaaaggaagtacc 37326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,987,734
Number of Sequences: 3902068
Number of extensions: 5987734
Number of successful extensions: 109633
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109534
Number of HSP's gapped (non-prelim): 95
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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