>gb|AY659278.1| Synthetic construct Peudomonas aeruginosa clone FLH051808.01F
           PA1335 gene, partial cds
          Length = 1278

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 129 tctccatggcggtacaggcgatg 151
           |||||||||||||||||||||||
Sbjct: 215 tctccatggcggtacaggcgatg 237

>gb|AE004563.1| Pseudomonas aeruginosa PAO1, section 124 of 529 of the complete
            genome
          Length = 9937

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 129  tctccatggcggtacaggcgatg 151
            |||||||||||||||||||||||
Sbjct: 1248 tctccatggcggtacaggcgatg 1226

>emb|AL935270.6| Mouse DNA sequence from clone RP23-391A14 on chromosome 2, complete
             sequence
          Length = 127274

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    cttcctctcctttctgtctgtt 43
             ||||||||||||||||||||||
Sbjct: 62207 cttcctctcctttctgtctgtt 62186

>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence
          Length = 109783

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    cctctcctttctgtctgttct 45
             |||||||||||||||||||||
Sbjct: 57258 cctctcctttctgtctgttct 57278

>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA
          Length = 5505

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 181 tgtcctctcaaagctcgctaccatg 205
           |||||||||| ||||||||||||||
Sbjct: 318 tgtcctctcacagctcgctaccatg 342

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 170     gcgatgaactctgtcctctcaaagctcgc 198
               ||||||||||| |||||| ||||||||||
Sbjct: 3238041 gcgatgaactccgtcctcgcaaagctcgc 3238013

>gb|AC009230.3| Homo sapiens BAC clone RP11-343B21 from 2, complete sequence
          Length = 173993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 265    gaccagcatgggaagcttccttgag 289
              ||||||||||||||| |||||||||
Sbjct: 172775 gaccagcatgggaagattccttgag 172751

>gb|AC079978.7| Homo sapiens BAC clone RP11-61H18 from 2, complete sequence
          Length = 5638

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 265  gaccagcatgggaagcttccttgag 289
            ||||||||||||||| |||||||||
Sbjct: 4857 gaccagcatgggaagattccttgag 4881

>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0015I14
          Length = 150650

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 170   gcgatgaactctgtcctctcaaagctcgc 198
             ||||||||||| |||||| ||||||||||
Sbjct: 25404 gcgatgaactccgtcctcgcaaagctcgc 25376

>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 31     ctttctgtctgttctgttatc 51
              |||||||||||||||||||||
Sbjct: 172790 ctttctgtctgttctgttatc 172770

>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete
              sequence
          Length = 187669

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     cctctcctttctgtctgttct 45
              |||||||||||||||||||||
Sbjct: 178289 cctctcctttctgtctgttct 178309

>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence
          Length = 175644

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 21     gcttcctctcctttctgtctgttct 45
              ||||||| |||||||||||||||||
Sbjct: 101130 gcttcctatcctttctgtctgttct 101106

>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 626   ggacttgtctgtgtagatgg 645
             ||||||||||||||||||||
Sbjct: 84984 ggacttgtctgtgtagatgg 84965

>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence
          Length = 193784

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   tcatttatgatgctggggat 553
             ||||||||||||||||||||
Sbjct: 51382 tcatttatgatgctggggat 51363

>gb|BC067986.2| Xenopus tropicalis RAD54-like (S. cerevisiae), mRNA (cDNA clone
            MGC:69368 IMAGE:5309406), complete cds
          Length = 2816

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   ttcctctcctttctgtctgt 42
            ||||||||||||||||||||
Sbjct: 1276 ttcctctcctttctgtctgt 1257

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 626      ggacttgtctgtgtagatgg 645
                ||||||||||||||||||||
Sbjct: 26749228 ggacttgtctgtgtagatgg 26749247

>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence
          Length = 193489

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     attgtatccatccattctga 114
              ||||||||||||||||||||
Sbjct: 163887 attgtatccatccattctga 163906

>gb|AY495607.1| Botryotinia fuckeliana polyketide synthase (PKS2) gene, complete cds
          Length = 11156

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 542  gatgctggggatccattgca 561
            ||||||||||||||||||||
Sbjct: 1292 gatgctggggatccattgca 1273

>ref|XM_545816.2| PREDICTED: Canis familiaris similar to transient receptor potential
            cation channel, subfamily M, member 1 (LOC488699), mRNA
          Length = 5983

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  ttctgaaaatctgatttgtt 128
            ||||||||||||||||||||
Sbjct: 4679 ttctgaaaatctgatttgtt 4660

>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the
              gene for a novel protein (FLJ35476), the gene for a novel
              protein similar to ABO family protein, two novel genes, the
              PHC2 gene for polyhomeotic-like 2 (Drosophila) and two CpG
              islands, complete sequence
          Length = 188665

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 593    cttctgcgtgtattcagtgc 612
              ||||||||||||||||||||
Sbjct: 140963 cttctgcgtgtattcagtgc 140944

>ref|NM_001001241.2| Xenopus tropicalis RAD54-like (S. cerevisiae) (rad54l), mRNA
          Length = 2816

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   ttcctctcctttctgtctgt 42
            ||||||||||||||||||||
Sbjct: 1276 ttcctctcctttctgtctgt 1257

>emb|AJ246015.1|CVU246015 Chara vulgaris mRNA for partial glyceraldehyde-3-phosphate
           dehydrogenase, subunit GapC1
          Length = 931

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 ccatcgacagtcttctgcgt 601
           ||||||||||||||||||||
Sbjct: 545 ccatcgacagtcttctgcgt 526

>gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, complete sequence
          Length = 160859

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttcctctcctttctgtctgt 42
             ||||||||||||||||||||
Sbjct: 68187 ttcctctcctttctgtctgt 68168

>gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome 16, complete sequence
          Length = 201384

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    atgaactctgtcctctcaaagctc 196
              ||||| ||||||||||||||||||
Sbjct: 190243 atgaaatctgtcctctcaaagctc 190220

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 582     ccatcgacagtcttctgcgt 601
               ||||||||||||||||||||
Sbjct: 1195903 ccatcgacagtcttctgcgt 1195884

>gb|AY118394.1| Drosophila melanogaster RE52162 full insert cDNA
          Length = 4400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 480  aagaactcaaggaacaagtc 499
            ||||||||||||||||||||
Sbjct: 2660 aagaactcaaggaacaagtc 2679

>ref|NM_164996.1| Drosophila melanogaster CG31760-RA (CG31760), mRNA
          Length = 4335

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 480  aagaactcaaggaacaagtc 499
            ||||||||||||||||||||
Sbjct: 2660 aagaactcaaggaacaagtc 2679

>gb|AC154208.2| Mus musculus BAC clone RP24-377L12 from chromosome 16, complete sequence
          Length = 178006

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 173    atgaactctgtcctctcaaagctc 196
              ||||| ||||||||||||||||||
Sbjct: 157520 atgaaatctgtcctctcaaagctc 157543

>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence,
            complete sequence
          Length = 140044

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 626  ggacttgtctgtgtagatgg 645
            ||||||||||||||||||||
Sbjct: 8612 ggacttgtctgtgtagatgg 8593

>gb|M81727.1|AEDGLYCA Agaricus bisporus glyceraldehyde-3-phosphate dehydrogenase (GPD I)
           gene, complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 catcgacagtcttctgcgtg 602
           ||||||||||||||||||||
Sbjct: 562 catcgacagtcttctgcgtg 543

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 626      ggacttgtctgtgtagatgg 645
                ||||||||||||||||||||
Sbjct: 26840551 ggacttgtctgtgtagatgg 26840570

>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence
          Length = 177771

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    attgtatccatccattctga 114
             ||||||||||||||||||||
Sbjct: 35693 attgtatccatccattctga 35712

>gb|AC124762.4| Mus musculus BAC clone RP23-155A10 from 6, complete sequence
          Length = 199207

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 533    atcatttatgatgctgggga 552
              ||||||||||||||||||||
Sbjct: 120942 atcatttatgatgctgggga 120923

>emb|AL138995.5|CNS01DX0 Human chromosome 14 DNA sequence BAC C-2588E21 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 163312

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   gaaaatctgatttgtttctc 132
             ||||||||||||||||||||
Sbjct: 72320 gaaaatctgatttgtttctc 72301

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 582     ccatcgacagtcttctgcgt 601
               ||||||||||||||||||||
Sbjct: 1229448 ccatcgacagtcttctgcgt 1229429

>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence
          Length = 212677

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 537    tttatgatgctggggatcca 556
              ||||||||||||||||||||
Sbjct: 136460 tttatgatgctggggatcca 136441

>emb|AL772189.7| Zebrafish DNA sequence from clone CH211-135B6 in linkage group 17,
             complete sequence
          Length = 183958

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ccatccattctgaaaatctg 121
             ||||||||||||||||||||
Sbjct: 61779 ccatccattctgaaaatctg 61760


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,980,290
Number of Sequences: 3902068
Number of extensions: 4980290
Number of successful extensions: 87611
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87436
Number of HSP's gapped (non-prelim): 175
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)