ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalf19 |
|---|---|
| Clone Library Name | barley_pub |
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 33.5 bits (75), Expect = 0.32 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +3 Query: 6 KGKT*CSRXXEAFVIVEASKFKRVGRKTTLRQDLANALDIRAFERTTKLGHCDVE 170 KG+T R EA +VEA F+ VG +TLR+ LA+ R +GH D E Sbjct: 137 KGQT--VRLNEALTVVEAGTFEAVGEVSTLREVLADG------HRALVVGHADEE 183
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 33.1 bits (74), Expect = 0.42 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +3 Query: 6 KGKT*CSRXXEAFVIVEASKFKRVGRKTTLRQDLANALDIRAFERTTKLGHCDVE 170 KG+T R EA +VEA F+ VG +TLR+ LA+ R +GH D E Sbjct: 137 KGQT--VRLNEALTVVEAGTFEAVGEISTLREILADG------HRALVVGHADEE 183
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 33.1 bits (74), Expect = 0.42 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +3 Query: 6 KGKT*CSRXXEAFVIVEASKFKRVGRKTTLRQDLANALDIRAFERTTKLGHCDVE 170 KG+T R EA +VEA F+ VG +TLR+ LA+ R +GH D E Sbjct: 137 KGQT--VRLNEALTVVEAGTFEAVGEISTLREILADG------HRALVVGHADEE 183
>FRVR_ECOLI (P32152) Putative frv operon regulatory protein [Includes: Putative| phosphotransferase EIIA component (EC 2.7.1.-) (Putative PTS system EIIA component)] Length = 582 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 344 ENSFIHCLHCTLEGVWLEER*EPAKNNLKSCFP 246 EN H L C VW+ E + + NNLK+ +P Sbjct: 274 ENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306
>RT31_MOUSE (Q61733) 28S ribosomal protein S31, mitochondrial precursor (S31mt)| (MRP-S31) (Imogen 38) Length = 384 Score = 29.6 bits (65), Expect = 4.7 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Frame = +3 Query: 267 ILRRLLSFLKPDTFQGAVKAMNERILS--VLDASGSGRV----DLGMFFAIIAPICSGPV 428 +L R+ +FL+P F G + R +S VL A+ SG V ++ F ICS V Sbjct: 1 MLHRIPAFLRPRPFSGLPLSCGNRDVSVAVLPAAQSGAVRTENNIQRHFCTSRSICSKKV 60 Query: 429 DRRKRVVFDALLWRPASEGGRGQ 497 D + V + + + A GRG+ Sbjct: 61 D--QSVPANEISQKAAESQGRGK 81
>SASA_SYNPX (Q7U871) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 383 Score = 29.6 bits (65), Expect = 4.7 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +3 Query: 93 LRQDLANALDIRAFERTTKLGHCDVELLRKEMNETDVPVSYSGTGIPEKSIRKAALE 263 +RQ L N L+ A + T GH + +L + +V V SG GIP + ++ L+ Sbjct: 258 MRQVLLNLLE-NALKYTGNGGHITLTMLHRTSQRVEVSVCDSGPGIPTEEQQRIFLD 313
>AXN2_BRARE (P57095) Axin-2 (Axis inhibition protein 2)| Length = 812 Score = 29.3 bits (64), Expect = 6.1 Identities = 31/102 (30%), Positives = 41/102 (40%) Frame = -3 Query: 420 QNRLEQ*WQRTSRDQRGQSQKHQGQREFFHSLPSLHPGRCLA*GKIGACEE*PQELLS*S 241 + RL+Q + RD+ S HSLP L P G CEE PQ +L Sbjct: 394 EERLQQIQEEEERDESEMSSSSAS-----HSLPLLPP---------GTCEEDPQAILDEH 439 Query: 240 TSLGCPCLSTIQGHQSHSSLSSEARHHSGQALSSSRRPLYQG 115 S + G QS L HS ++ S +RPL +G Sbjct: 440 LSR----VLKTPGCQSPGLL-----RHSPRSRSPEQRPLPRG 472
>TYSY_NEIMB (Q9JY72) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.3 bits (64), Expect = 6.1 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 Query: 219 GTGIPEKSIRKAALEVILRRLLSFLKPDTFQGAVKAMNERILSVLDASGSGRVDLG 386 G G P + +K L I+ LL FLK DT +K + + +S+ D DLG Sbjct: 39 GKGFPLLTTKKLHLRSIIHELLWFLKGDT---NIKYLKDNNVSIWDEWADENGDLG 91
>TYSY_NEIMA (Q9JT57) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.3 bits (64), Expect = 6.1 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 Query: 219 GTGIPEKSIRKAALEVILRRLLSFLKPDTFQGAVKAMNERILSVLDASGSGRVDLG 386 G G P + +K L I+ LL FLK DT +K + + +S+ D DLG Sbjct: 39 GKGFPLLTTKKLHLRSIIHELLWFLKGDT---NIKYLKDNNVSIWDEWADENGDLG 91
>Y1206_METJA (Q58603) UPF0095 protein MJ1206| Length = 424 Score = 29.3 bits (64), Expect = 6.1 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = +3 Query: 105 LANALDIRAFERTTKLGHCDVELLR---KEMNETDVPVSYSGTGIPEKSIRKAALEVILR 275 L + LD+R ++T ++G DVEL K + + VP S E SI A LE I R Sbjct: 40 LGDELDLRELQKTGRVGRIDVELTNINGKSIAKITVPSSLDRI---ETSILAATLETIDR 96
>MCRC_METBF (P07959) Methyl-coenzyme M reductase operon protein C| Length = 206 Score = 28.9 bits (63), Expect = 7.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 Query: 174 LRKEMNETDVPVSYSGTGIPEKSIR 248 +RKE + V V YSG+GIPE +R Sbjct: 61 MRKENIQVSVLVLYSGSGIPESGMR 85
>CATR_ASPNG (P55303) Catalase R (EC 1.11.1.6)| Length = 730 Score = 28.9 bits (63), Expect = 7.9 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = -3 Query: 198 QSHSSLSSEARHHSGQALSSSRRPLYQGHWPNPDAMWSSFQPS 70 Q H ++ R+ SG + + P + HW P W+S P+ Sbjct: 454 QGHGFFTAPYRYASGHLVRQTS-PTFNDHWSQPAMFWNSLIPA 495
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 28.9 bits (63), Expect = 7.9 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 273 EE*PQELLS*STSLGCPCLSTIQGHQ--SHSSLSSEARHHSGQ 151 +E P E +S S SLG P ++ +GH+ H LSS A S Q Sbjct: 1144 KEKPDEYVSSSRSLGLPIAASSEGHRLPGHGPLSSSAPGASTQ 1186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,006,171 Number of Sequences: 219361 Number of extensions: 1554096 Number of successful extensions: 5267 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5265 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
