Clone Name | baalf19 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 396 bits (200), Expect = e-107 Identities = 377/436 (86%) Strand = Plus / Plus Query: 58 catccaagttcaagagggttggaaggaagaccacattgcgtcaggatttggccaatgccc 117 ||||||||||||||||||||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 8653279 catccaagttcaagagggttggaagaaagactaccttgcggcaggaccttgctaatgccc 8653338 Query: 118 ttgatataagggccttcgagaggacgacaaagcttggccactgtgatgtcgagcttctga 177 |||||||||| ||||| |||| |||||||||||||||| |||||| | |||||||||| Sbjct: 8653339 ttgatataagagcctttgagaaaacgacaaagcttggccgctgtgacgcggagcttctga 8653398 Query: 178 ggaaagagatgaatgagactgatgtccctgtatcgtactcaggcacgggcatcccagaga 237 ||||||||||||| |||||||||||||| |||| ||||||||| | |||| |||||||| Sbjct: 8653399 ggaaagagatgaacgagactgatgtccccatatcctactcaggcgctggcaacccagaga 8653458 Query: 238 agtcgatcaggaaagcagctcttgaggttattcttcgcaggctcctatctttcctcaagc 297 |||| || ||||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 8653459 agtcaatacggaaagcagctctcgaggttattctccacaggctcctatctttcctcaagc 8653518 Query: 298 cagacaccttccagggtgcagtgaaggcaatgaatgaaagaattctctctgtccttgatg 357 |||| ||||| |||||| | |||||||| || || |||||||| ||||| |||||||||| Sbjct: 8653519 cagatacctttcagggttctgtgaaggcgattaacgaaagaatcctctccgtccttgatg 8653578 Query: 358 cttctggctctggccgcgttgatctcgggatgttctttgccatcattgctccaatctgtt 417 | ||||| |||||||| ||||| || |||||||||||||| || || || ||||| |||| Sbjct: 8653579 cctctggttctggccgtgttgaccttgggatgttctttgctattatcgccccaatttgtt 8653638 Query: 418 ctggtccagtggataggcgcaagcgtgtcgttttcgatgcactcctttggcgtcctgcaa 477 ||||||| ||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 8653639 ctggtcctgtggataagcgcaagcgggttgtctttgatgcacttctttggcgtccggcaa 8653698 Query: 478 gcgaaggtggcagggg 493 | ||||| ||||||| Sbjct: 8653699 gtgaaggaagcagggg 8653714
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 396 bits (200), Expect = e-107 Identities = 377/436 (86%) Strand = Plus / Plus Query: 58 catccaagttcaagagggttggaaggaagaccacattgcgtcaggatttggccaatgccc 117 ||||||||||||||||||||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 134251 catccaagttcaagagggttggaagaaagactaccttgcggcaggaccttgctaatgccc 134310 Query: 118 ttgatataagggccttcgagaggacgacaaagcttggccactgtgatgtcgagcttctga 177 |||||||||| ||||| |||| |||||||||||||||| |||||| | |||||||||| Sbjct: 134311 ttgatataagagcctttgagaaaacgacaaagcttggccgctgtgacgcggagcttctga 134370 Query: 178 ggaaagagatgaatgagactgatgtccctgtatcgtactcaggcacgggcatcccagaga 237 ||||||||||||| |||||||||||||| |||| ||||||||| | |||| |||||||| Sbjct: 134371 ggaaagagatgaacgagactgatgtccccatatcctactcaggcgctggcaacccagaga 134430 Query: 238 agtcgatcaggaaagcagctcttgaggttattcttcgcaggctcctatctttcctcaagc 297 |||| || ||||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 134431 agtcaatacggaaagcagctctcgaggttattctccacaggctcctatctttcctcaagc 134490 Query: 298 cagacaccttccagggtgcagtgaaggcaatgaatgaaagaattctctctgtccttgatg 357 |||| ||||| |||||| | |||||||| || || |||||||| ||||| |||||||||| Sbjct: 134491 cagatacctttcagggttctgtgaaggcgattaacgaaagaatcctctccgtccttgatg 134550 Query: 358 cttctggctctggccgcgttgatctcgggatgttctttgccatcattgctccaatctgtt 417 | ||||| |||||||| ||||| || |||||||||||||| || || || ||||| |||| Sbjct: 134551 cctctggttctggccgtgttgaccttgggatgttctttgctattatcgccccaatttgtt 134610 Query: 418 ctggtccagtggataggcgcaagcgtgtcgttttcgatgcactcctttggcgtcctgcaa 477 ||||||| ||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 134611 ctggtcctgtggataagcgcaagcgggttgtctttgatgcacttctttggcgtccggcaa 134670 Query: 478 gcgaaggtggcagggg 493 | ||||| ||||||| Sbjct: 134671 gtgaaggaagcagggg 134686
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 396 bits (200), Expect = e-107 Identities = 377/436 (86%) Strand = Plus / Plus Query: 58 catccaagttcaagagggttggaaggaagaccacattgcgtcaggatttggccaatgccc 117 ||||||||||||||||||||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 8651114 catccaagttcaagagggttggaagaaagactaccttgcggcaggaccttgctaatgccc 8651173 Query: 118 ttgatataagggccttcgagaggacgacaaagcttggccactgtgatgtcgagcttctga 177 |||||||||| ||||| |||| |||||||||||||||| |||||| | |||||||||| Sbjct: 8651174 ttgatataagagcctttgagaaaacgacaaagcttggccgctgtgacgcggagcttctga 8651233 Query: 178 ggaaagagatgaatgagactgatgtccctgtatcgtactcaggcacgggcatcccagaga 237 ||||||||||||| |||||||||||||| |||| ||||||||| | |||| |||||||| Sbjct: 8651234 ggaaagagatgaacgagactgatgtccccatatcctactcaggcgctggcaacccagaga 8651293 Query: 238 agtcgatcaggaaagcagctcttgaggttattcttcgcaggctcctatctttcctcaagc 297 |||| || ||||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 8651294 agtcaatacggaaagcagctctcgaggttattctccacaggctcctatctttcctcaagc 8651353 Query: 298 cagacaccttccagggtgcagtgaaggcaatgaatgaaagaattctctctgtccttgatg 357 |||| ||||| |||||| | |||||||| || || |||||||| ||||| |||||||||| Sbjct: 8651354 cagatacctttcagggttctgtgaaggcgattaacgaaagaatcctctccgtccttgatg 8651413 Query: 358 cttctggctctggccgcgttgatctcgggatgttctttgccatcattgctccaatctgtt 417 | ||||| |||||||| ||||| || |||||||||||||| || || || ||||| |||| Sbjct: 8651414 cctctggttctggccgtgttgaccttgggatgttctttgctattatcgccccaatttgtt 8651473 Query: 418 ctggtccagtggataggcgcaagcgtgtcgttttcgatgcactcctttggcgtcctgcaa 477 ||||||| ||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 8651474 ctggtcctgtggataagcgcaagcgggttgtctttgatgcacttctttggcgtccggcaa 8651533 Query: 478 gcgaaggtggcagggg 493 | ||||| ||||||| Sbjct: 8651534 gtgaaggaagcagggg 8651549
>dbj|AK121215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089O12, full insert sequence Length = 3172 Score = 396 bits (200), Expect = e-107 Identities = 377/436 (86%) Strand = Plus / Plus Query: 58 catccaagttcaagagggttggaaggaagaccacattgcgtcaggatttggccaatgccc 117 ||||||||||||||||||||||||| ||||| || ||||| ||||| | || ||||||| Sbjct: 1844 catccaagttcaagagggttggaagaaagactaccttgcggcaggaccttgctaatgccc 1903 Query: 118 ttgatataagggccttcgagaggacgacaaagcttggccactgtgatgtcgagcttctga 177 |||||||||| ||||| |||| |||||||||||||||| |||||| | |||||||||| Sbjct: 1904 ttgatataagagcctttgagaaaacgacaaagcttggccgctgtgacgcggagcttctga 1963 Query: 178 ggaaagagatgaatgagactgatgtccctgtatcgtactcaggcacgggcatcccagaga 237 ||||||||||||| |||||||||||||| |||| ||||||||| | |||| |||||||| Sbjct: 1964 ggaaagagatgaacgagactgatgtccccatatcctactcaggcgctggcaacccagaga 2023 Query: 238 agtcgatcaggaaagcagctcttgaggttattcttcgcaggctcctatctttcctcaagc 297 |||| || ||||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 2024 agtcaatacggaaagcagctctcgaggttattctccacaggctcctatctttcctcaagc 2083 Query: 298 cagacaccttccagggtgcagtgaaggcaatgaatgaaagaattctctctgtccttgatg 357 |||| ||||| |||||| | |||||||| || || |||||||| ||||| |||||||||| Sbjct: 2084 cagatacctttcagggttctgtgaaggcgattaacgaaagaatcctctccgtccttgatg 2143 Query: 358 cttctggctctggccgcgttgatctcgggatgttctttgccatcattgctccaatctgtt 417 | ||||| |||||||| ||||| || |||||||||||||| || || || ||||| |||| Sbjct: 2144 cctctggttctggccgtgttgaccttgggatgttctttgctattatcgccccaatttgtt 2203 Query: 418 ctggtccagtggataggcgcaagcgtgtcgttttcgatgcactcctttggcgtcctgcaa 477 ||||||| ||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 2204 ctggtcctgtggataagcgcaagcgggttgtctttgatgcacttctttggcgtccggcaa 2263 Query: 478 gcgaaggtggcagggg 493 | ||||| ||||||| Sbjct: 2264 gtgaaggaagcagggg 2279
>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence Length = 219769 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 attgtagaagcatccaagttcaagag 73 |||||||| ||||||||||||||||| Sbjct: 134483 attgtagatgcatccaagttcaagag 134458
>ref|XM_422710.1| PREDICTED: Gallus gallus similar to Carboxypeptidase N 83 kDa chain (Carboxypeptidase N regulatory subunit) (LOC424899), mRNA Length = 5817 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agcgaaggtggcaggggccag 497 ||||||||||||||||||||| Sbjct: 879 agcgaaggtggcaggggccag 859
>ref|XM_416901.1| PREDICTED: Gallus gallus similar to Rev1S (LOC418704), mRNA Length = 2280 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 tcaggaaagcagctcttgaggttat 268 |||||||||||||||| |||||||| Sbjct: 641 tcaggaaagcagctctggaggttat 665
>gb|AC121852.4| Mus musculus chromosome 3 clone RP24-93P18, complete sequence Length = 206414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 atgaatgaaagaattctctct 347 ||||||||||||||||||||| Sbjct: 46860 atgaatgaaagaattctctct 46840
>gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, complete sequence Length = 205323 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 atgaatgaaagaattctctct 347 ||||||||||||||||||||| Sbjct: 202048 atgaatgaaagaattctctct 202028
>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin (LOC452970), mRNA Length = 7365 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 6351 gaggaaagagatgaatgaga 6370
>gb|AC117812.9| Mus musculus chromosome 5, clone RP24-571E8, complete sequence Length = 127532 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 126669 tgaatgagactgatgtccct 126650
>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) (SPTB), transcript variant 1, mRNA Length = 10064 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 6024 gaggaaagagatgaatgaga 6043
>ref|NM_010427.2| Mus musculus hepatocyte growth factor (Hgf), mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 1004 tgaatgagactgatgtccct 1023
>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) (SPTB), transcript variant 2, mRNA Length = 6695 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 6024 gaggaaagagatgaatgaga 6043
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gacaaagcttggccactgtg 162 |||||||||||||||||||| Sbjct: 166788 gacaaagcttggccactgtg 166807
>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence Length = 157001 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 94215 tgaatgagactgatgtccct 94234
>gb|AC116420.8| Mus musculus chromosome 1, clone RP24-141B16, complete sequence Length = 191497 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 gaaagaattctctctgtccttgat 356 ||||||| |||||||||||||||| Sbjct: 167308 gaaagaactctctctgtccttgat 167285
>gb|AC113511.7| Mus musculus chromosome 1, clone RP23-378O19, complete sequence Length = 223985 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gaaagaattctctctgtccttgat 356 ||||||| |||||||||||||||| Sbjct: 204158 gaaagaactctctctgtccttgat 204181
>emb|AL354773.8| Human DNA sequence from clone RP5-855L24 on chromosome 20 Contains part of the C20orf133 gene, complete sequence Length = 117609 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaagagatgaatgagactga 199 |||||||||||||||||||| Sbjct: 98022 aaagagatgaatgagactga 98041
>gb|AF013185.1|AH005869S14 Homo sapiens beta-spectrin (HSpTB1) gene, exon 29 Length = 250 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 134 gaggaaagagatgaatgaga 153
>emb|X72307.1|MMHGF M.musculus mRNA for hepatocyte growth factor Length = 2320 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 942 tgaatgagactgatgtccct 961
>emb|X59511.1|HSBSPEC3 H.sapiens mRNA for beta-spectrin (3' partial) Length = 954 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 246 gaggaaagagatgaatgaga 265
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ttgccatcattgctccaatc 413 |||||||||||||||||||| Sbjct: 261008 ttgccatcattgctccaatc 261027
>gb|AF465439.1| Homo sapiens beta I spectrin form betaI sigma3 mRNA, partial cds; alternatively spliced Length = 3456 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 1965 gaggaaagagatgaatgaga 1984
>gb|S71816.1| hepatocyte growth factor [mice, liver, mRNA Partial, 2281 nt] Length = 2281 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 881 tgaatgagactgatgtccct 900
>dbj|AK042121.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630060C16 product:hepatocyte growth factor, full insert sequence Length = 2757 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 1004 tgaatgagactgatgtccct 1023
>gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 215272 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 tccttgatgcttctggctct 368 |||||||||||||||||||| Sbjct: 109253 tccttgatgcttctggctct 109234
>gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 112405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tctttcctcaagccagacac 304 |||||||||||||||||||| Sbjct: 13786 tctttcctcaagccagacac 13767
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ttgccatcattgctccaatc 413 |||||||||||||||||||| Sbjct: 318130 ttgccatcattgctccaatc 318149
>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171030 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 64880 gaggaaagagatgaatgaga 64899
>emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chromosome 17, complete sequence Length = 212052 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gacaaagcttggccactgtg 162 |||||||||||||||||||| Sbjct: 108632 gacaaagcttggccactgtg 108651
>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) variant protein Length = 7481 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 6113 gaggaaagagatgaatgaga 6132
>emb|X84046.1|MMHGFSF M.musculus mRNA for hepatocyte growth factor/scatter factor Length = 2540 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 921 tgaatgagactgatgtccct 940
>gb|M37884.1|HUMSPC1 Human muscle beta spectrin mRNA, 3' end Length = 4190 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 2808 gaggaaagagatgaatgaga 2827
>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds Length = 6765 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 6065 gaggaaagagatgaatgaga 6084
>dbj|D10213.1|MUSHGF2 Mouse mRNA for hepatocyte growth factor, complete cds Length = 2189 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 866 tgaatgagactgatgtccct 885
>dbj|D10212.1|MUSHGF1 Mouse mRNA for hepatocyte growth factor, complete cds Length = 2204 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgaatgagactgatgtccct 206 |||||||||||||||||||| Sbjct: 881 tgaatgagactgatgtccct 900
>gb|U00905.1|HSU00905 Human beta-spectrin (HSPTB1) gene, Humbspec.29 exon sequence Length = 301 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaggaaagagatgaatgaga 195 |||||||||||||||||||| Sbjct: 134 gaggaaagagatgaatgaga 153 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,088,067 Number of Sequences: 3902068 Number of extensions: 4088067 Number of successful extensions: 77925 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77800 Number of HSP's gapped (non-prelim): 125 length of query: 497 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 475 effective length of database: 17,147,199,772 effective search space: 8144919891700 effective search space used: 8144919891700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)