>YWZ5_CAEEL (Q11095) Hypothetical protein C02B8.5|
          Length = 453

 Score = 34.3 bits (77), Expect = 0.080
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 247 NTIWCSRCEIWWKWRDVPVDKY 182
           N+ WC  C + W+WR +P D Y
Sbjct: 412 NSEWCGLCNLCWQWRKLPADYY 433

>PFA5_YEAST (Q03289) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 374

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 301 YDKYRIDECIRADPIGHGNTIWCSRCE 221
           YD     +C ++DP  HG  IWCS C+
Sbjct: 111 YDAVVPPKCYQSDP--HGYPIWCSECQ 135

>FPG_BDEBA (Q6ML45) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 269

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 325 FRLYSMTMYDKYRIDECIRADPIGHGNTIWCSRCE 221
           FR+Y           + +++  +G  NT WCSRC+
Sbjct: 234 FRVYGRDKEPCVTCGQQVKSKVLGGRNTFWCSRCQ 268

>FER_THEAC (P00218) Zinc-containing ferredoxin|
          Length = 142

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 301 YDKYRIDECIRADPIGHGNTIWCSRCE 221
           ++KYR D+C   DP+   + I+C  CE
Sbjct: 107 WNKYRTDKC---DPVRESDCIFCMACE 130

>SYT_MANSM (Q65TQ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 643

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = +1

Query: 169 DKFLRTCRPARLAI--STIFRTDYTILYFH-----VLLGPHVYTHRFCIYHTL 306
           D F +   P ++AI    I + D+  LY H     +  GPHV   RFC +  L
Sbjct: 146 DTFEKRGEPYKMAILDENIAKDDHPALYHHEEYIDMCRGPHVPNMRFCHHFKL 198

>RHOC_MOUSE (Q62159) Rho-related GTP-binding protein RhoC precursor|
           (Silica-induced gene 61 protein) (SIG-61)
          Length = 193

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -1

Query: 227 VRNMVEMARRAGRQVRKN 174
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184

>RHOC_HUMAN (P08134) Rho-related GTP-binding protein RhoC precursor (H9)|
          Length = 193

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -1

Query: 227 VRNMVEMARRAGRQVRKN 174
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184

>KPRS3_ORYSA (Q8S2E5) Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 3)
          Length = 409

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 3   RSXPSRSTAGHMHASQYPPQRNATHAIITANSISTTPSAPXMLAVCV 143
           R  P  S AG +HAS +    +AT + I +N+     +AP +  + V
Sbjct: 40  RPSPRASAAGRLHASLHLGGASATGSSIVSNASGIHLAAPVLAPLAV 86

>PFA5_CANGA (Q6FMP5) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 352

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 277 CIRADPIGHGNTIWCSRCE 221
           C ++DP  HG  +WCS C+
Sbjct: 104 CYQSDP--HGYPVWCSNCQ 120

>LTB1L_HUMAN (Q14766) Latent transforming growth factor beta-binding protein,|
           isoform 1L precursor (LTBP-1) (Transforming growth
           factor beta-1-binding protein 1) (TGF-beta1-BP-1)
          Length = 1595

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 286 IDECIRADPIGHG---NTIWCSRCE 221
           +DEC+R D  G G   NT+   RCE
Sbjct: 832 VDECLRPDVCGEGHCVNTVGAFRCE 856

>ENV_HV1J3 (P12489) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 867

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 47  PVSTATQRNARNNYSELYIYDAVSAKXASRVCPAGDGEP**INFC 181
           P++ +T+ N +N+ S  Y   + +    ++ CP    EP  I++C
Sbjct: 186 PINNSTKDNIKNDNSTRYRLISCNTSVITQACPKISFEPIPIHYC 230

>LTB1S_HUMAN (P22064) Latent transforming growth factor beta-binding protein,|
           isoform 1S precursor (LTBP-1) (Transforming growth
           factor beta-1-binding protein 1) (TGF-beta1-BP-1)
          Length = 1394

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 286 IDECIRADPIGHG---NTIWCSRCE 221
           +DEC+R D  G G   NT+   RCE
Sbjct: 631 VDECLRPDVCGEGHCVNTVGAFRCE 655

>GLGB_SOLTU (P30924) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch|
           branching enzyme) (Q-enzyme)
          Length = 861

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 253 HGNTIWCSRCEIWWKWRDVPVDKYAKIY 170
           HGN +W  R   W K+      K+A  Y
Sbjct: 213 HGNGVWVDRIPAWIKYATADATKFAAPY 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,162,935
Number of Sequences: 219361
Number of extensions: 774867
Number of successful extensions: 2071
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)