Clone Name | baalf15 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK099742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C23, full insert sequence Length = 2624 Score = 178 bits (90), Expect = 1e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 1066 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 1125 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaa 360 ||||||| ||||||| | || ||||||||| | ||| ||||||| || || ||||||||| Sbjct: 1126 atgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaa 1185 Query: 361 gtggaagctaccattattaatggtaagggaacagagactggtcacataattgtcacgact 420 || ||||| || |||||||| || ||||||||||| || || |||||||||||||| ||| Sbjct: 1186 gttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtcacaact 1245 Query: 421 actggtggcaaaaatggtcagccgaaacag 450 |||||||||| ||||||||||||||||||| Sbjct: 1246 actggtggcagaaatggtcagccgaaacag 1275
>dbj|AK068737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158B10, full insert sequence Length = 1829 Score = 178 bits (90), Expect = 1e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 195 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 254 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaa 360 ||||||| ||||||| | || ||||||||| | ||| ||||||| || || ||||||||| Sbjct: 255 atgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaa 314 Query: 361 gtggaagctaccattattaatggtaagggaacagagactggtcacataattgtcacgact 420 || ||||| || |||||||| || ||||||||||| || || |||||||||||||| ||| Sbjct: 315 gttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtcacaact 374 Query: 421 actggtggcaaaaatggtcagccgaaacag 450 |||||||||| ||||||||||||||||||| Sbjct: 375 actggtggcagaaatggtcagccgaaacag 404
>dbj|AB059621.1| Oryza sativa OSKgamma mRNA for shaggy-related protein kinase gamma, complete cds Length = 1592 Score = 178 bits (90), Expect = 1e-41 Identities = 180/210 (85%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 199 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 258 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaa 360 ||||||| ||||||| | || ||||||||| | ||| ||||||| || || ||||||||| Sbjct: 259 atgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaa 318 Query: 361 gtggaagctaccattattaatggtaagggaacagagactggtcacataattgtcacgact 420 || ||||| || |||||||| || ||||||||||| || || |||||||||||||| ||| Sbjct: 319 gttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtcacaact 378 Query: 421 actggtggcaaaaatggtcagccgaaacag 450 |||||||||| ||||||||||||||||||| Sbjct: 379 actggtggcagaaatggtcagccgaaacag 408
>dbj|AK104687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E09, full insert sequence Length = 1600 Score = 170 bits (86), Expect = 3e-39 Identities = 179/210 (85%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 42 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 101 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaa 360 ||||||| |||||| | || ||||||||| | ||| ||||||| || || ||||||||| Sbjct: 102 atgggtgccgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaa 161 Query: 361 gtggaagctaccattattaatggtaagggaacagagactggtcacataattgtcacgact 420 || ||||| || |||||||| || ||||||||||| || || |||||||||||||| ||| Sbjct: 162 gttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtcacaact 221 Query: 421 actggtggcaaaaatggtcagccgaaacag 450 |||||||||| ||||||||||||||||||| Sbjct: 222 actggtggcagaaatggtcagccgaaacag 251
>ref|NM_187864.1| Oryza sativa (japonica cultivar-group), Ozsa8308 predicted mRNA Length = 1227 Score = 167 bits (84), Expect = 5e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 247 atggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagcatgggt 306 |||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||||||||| Sbjct: 1 atgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagcatgggt 60 Query: 307 gttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaagtggaa 366 | ||||||| | || ||||||||| | ||| ||||||| || || ||||||||||| ||| Sbjct: 61 gctgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaagttgaa 120 Query: 367 gctaccattattaatggtaagggaacagagactggtcacataattgtcacgactactggt 426 || || |||||||| || ||||||||||| || || |||||||||||||| ||||||||| Sbjct: 121 gcgactattattaacggcaagggaacagaaaccggccacataattgtcacaactactggt 180 Query: 427 ggcaaaaatggtcagccgaaacag 450 |||| ||||||||||||||||||| Sbjct: 181 ggcagaaatggtcagccgaaacag 204
>gb|AY103545.1| Zea mays PCO153236 mRNA sequence Length = 1967 Score = 143 bits (72), Expect = 8e-31 Identities = 174/208 (83%) Strand = Plus / Plus Query: 243 agagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagcat 302 |||||||||||| | || ||||| || || ||| |||||||||||||| |||||||||| Sbjct: 350 agagatggcttcagctggtgttgccccttctgggtacaagaacagcagcagcaccagcat 409 Query: 303 gggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataaggaagt 362 |||| || ||| | | |||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 410 tggtgccgaaaagttgcaagatcacatgaacgagctaaagattagagatgataaggaagt 469 Query: 363 ggaagctaccattattaatggtaagggaacagagactggtcacataattgtcacgactac 422 ||||| ||||| |||||||| || || || || ||||| |||||||||||||| ||||| Sbjct: 470 tgaagcaaccataattaatgggaaagggactgaaactgggcacataattgtcaccactac 529 Query: 423 tggtggcaaaaatggtcagccgaaacag 450 ||||||||| |||||||| || |||||| Sbjct: 530 tggtggcaagaatggtcaaccaaaacag 557
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 5e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 356 aggaagtggaagctaccattattaatggtaagggaacagagactggtcacataattgtca 415 ||||||| ||||| || |||||||| || ||||||||||| || || ||||||||||||| Sbjct: 8330227 aggaagttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtca 8330286 Query: 416 cgactactggtggcaaaaatggtcagccgaaacaggtga 454 | ||||||||||||| ||||||||||||||||||||||| Sbjct: 8330287 caactactggtggcagaaatggtcagccgaaacaggtga 8330325 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 8330021 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 8330080 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataagg 358 ||||||| ||||||| | || ||||||||| | ||| ||||||| || || ||||||| Sbjct: 8330081 atgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataagg 8330138 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactact 41 |||||||||||||||||||| Sbjct: 10273257 gtagtagtagtagtactact 10273276
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 117 bits (59), Expect = 5e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 356 aggaagtggaagctaccattattaatggtaagggaacagagactggtcacataattgtca 415 ||||||| ||||| || |||||||| || ||||||||||| || || ||||||||||||| Sbjct: 124158 aggaagttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtca 124217 Query: 416 cgactactggtggcaaaaatggtcagccgaaacaggtga 454 | ||||||||||||| ||||||||||||||||||||||| Sbjct: 124218 caactactggtggcagaaatggtcagccgaaacaggtga 124256 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 241 taagagatggcttctgtaggcgttgctccgtccgggcacaagaacagcagcggcaccagc 300 |||||||||| ||| ||||| ||||| ||||| ||| ||||||||||| |||||||| Sbjct: 123952 taagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagc 124011 Query: 301 atgggtgttgagaagctaccagatcagatgaacgatttgaagatcagagatgataagg 358 ||||||| ||||||| | || ||||||||| | ||| ||||||| || || ||||||| Sbjct: 124012 atgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataagg 124069
>dbj|AK099990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A13, full insert sequence Length = 2821 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 280 aagaacagcagcggcaccagcatgggtgttgagaagctaccagatcagatgaacgatttg 339 |||||||||||| ||||| ||||||| ||||||| | || ||||||||| | ||| || Sbjct: 2220 aagaacagcagcttcaccacaatgggtgctgagaagttgcctgatcagatgcatgatctg 2279 Query: 340 aagatcagagatgataaggaagtggaagctaccattattaatggtaagggaacagagact 399 ||||| || ||||| || ||||| ||| || | |||||| || |||||| |||| || Sbjct: 2280 aagataagggatgacaatgaagttcaagtgactaatattaacggcaagggagcagaaacc 2339 Query: 400 ggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaac 448 || |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 2340 ggccacataattgtcacaactactggtggcagaaatggtcagccgaaac 2388
>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0066C04, complete sequence Length = 133944 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 375 tattaatggtaagggaacagagactggtcacataattgtcacgactactggtggcaaaaa 434 |||||| || |||||| |||| || || |||||||||||||| ||||||||||||| ||| Sbjct: 112136 tattaacggcaagggagcagaaaccggccacataattgtcacaactactggtggcagaaa 112195 Query: 435 tggtcagccgaaacaggtga 454 |||||||||||||| ||||| Sbjct: 112196 tggtcagccgaaactggtga 112215 Score = 44.1 bits (22), Expect = 0.54 Identities = 61/74 (82%) Strand = Plus / Plus Query: 280 aagaacagcagcggcaccagcatgggtgttgagaagctaccagatcagatgaacgatttg 339 |||||||||||| ||||| ||||||| ||||||| | || ||||||||| | ||| || Sbjct: 111949 aagaacagcagcttcaccacaatgggtgctgagaagttgcctgatcagatgcatgatctg 112008 Query: 340 aagatcagagatga 353 ||||| || ||||| Sbjct: 112009 aagataagggatga 112022
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 375 tattaatggtaagggaacagagactggtcacataattgtcacgactactggtggcaaaaa 434 |||||| || |||||| |||| || || |||||||||||||| ||||||||||||| ||| Sbjct: 11635590 tattaacggcaagggagcagaaaccggccacataattgtcacaactactggtggcagaaa 11635531 Query: 435 tggtcagccgaaacaggtga 454 |||||||||||||| ||||| Sbjct: 11635530 tggtcagccgaaactggtga 11635511 Score = 44.1 bits (22), Expect = 0.54 Identities = 61/74 (82%) Strand = Plus / Minus Query: 280 aagaacagcagcggcaccagcatgggtgttgagaagctaccagatcagatgaacgatttg 339 |||||||||||| ||||| ||||||| ||||||| | || ||||||||| | ||| || Sbjct: 11635777 aagaacagcagcttcaccacaatgggtgctgagaagttgcctgatcagatgcatgatctg 11635718 Query: 340 aagatcagagatga 353 ||||| || ||||| Sbjct: 11635717 aagataagggatga 11635704 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agtagtagtagtactactat 43 |||||||||||||||||||| Sbjct: 13674963 agtagtagtagtactactat 13674982
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 375 tattaatggtaagggaacagagactggtcacataattgtcacgactactggtggcaaaaa 434 |||||| || |||||| |||| || || |||||||||||||| ||||||||||||| ||| Sbjct: 11714779 tattaacggcaagggagcagaaaccggccacataattgtcacaactactggtggcagaaa 11714720 Query: 435 tggtcagccgaaacaggtga 454 |||||||||||||| ||||| Sbjct: 11714719 tggtcagccgaaactggtga 11714700 Score = 44.1 bits (22), Expect = 0.54 Identities = 61/74 (82%) Strand = Plus / Minus Query: 280 aagaacagcagcggcaccagcatgggtgttgagaagctaccagatcagatgaacgatttg 339 |||||||||||| ||||| ||||||| ||||||| | || ||||||||| | ||| || Sbjct: 11714966 aagaacagcagcttcaccacaatgggtgctgagaagttgcctgatcagatgcatgatctg 11714907 Query: 340 aagatcagagatga 353 ||||| || ||||| Sbjct: 11714906 aagataagggatga 11714893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agtagtagtagtactactat 43 |||||||||||||||||||| Sbjct: 13756961 agtagtagtagtactactat 13756980
>ref|NM_121468.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G14640 mRNA, complete cds Length = 1712 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 338 tgaagatcagagatgataaggaagtggaagctaccattattaatggtaagggaacagaga 397 ||||||| | ||||||||||||| ||||||| | | || |||| || ||||| || | Sbjct: 311 tgaagataaaagatgataaggaaatggaagcagctgtggttgatgggaatggaactgaaa 370 Query: 398 ctggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaacag 450 | |||||||| ||||| || |||| |||||| |||||||||||||| |||||| Sbjct: 371 caggtcacattattgttacaactattggtggtaaaaatggtcagcctaaacag 423
>gb|BT010466.1| Arabidopsis thaliana At5g14640/T15N1_130 gene, complete cds Length = 1233 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 338 tgaagatcagagatgataaggaagtggaagctaccattattaatggtaagggaacagaga 397 ||||||| | ||||||||||||| ||||||| | | || |||| || ||||| || | Sbjct: 98 tgaagataaaagatgataaggaaatggaagcagctgtggttgatgggaatggaactgaaa 157 Query: 398 ctggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaacag 450 | |||||||| ||||| || |||| |||||| |||||||||||||| |||||| Sbjct: 158 caggtcacattattgttacaactattggtggtaaaaatggtcagcctaaacag 210
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 400 ggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaacaggt 452 |||||||| ||||| || |||| |||||| |||||||||||||| |||||||| Sbjct: 58427 ggtcacattattgttacaactattggtggtaaaaatggtcagcctaaacaggt 58375
>gb|AY065043.1| Arabidopsis thaliana AT5g14640/T15N1_130 mRNA, complete cds Length = 1712 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 338 tgaagatcagagatgataaggaagtggaagctaccattattaatggtaagggaacagaga 397 ||||||| | ||||||||||||| ||||||| | | || |||| || ||||| || | Sbjct: 311 tgaagataaaagatgataaggaaatggaagcagctgtggttgatgggaatggaactgaaa 370 Query: 398 ctggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaacag 450 | |||||||| ||||| || |||| |||||| |||||||||||||| |||||| Sbjct: 371 caggtcacattattgttacaactattggtggtaaaaatggtcagcctaaacag 423
>dbj|AP004949.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45F11, TM0122, complete sequence Length = 90864 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 388 ggaacagagactggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaa 447 |||||||| ||||| || ||||||||||| || | |||||| |||||||| ||||| ||| Sbjct: 65802 ggaacagaaactggacatataattgtcactaccattggtggtaaaaatggccagcctaaa 65743 Query: 448 caggt 452 ||||| Sbjct: 65742 caggt 65738
>gb|DQ241848.1| Solanum tuberosum clone 187B01 NtK-1-like mRNA, complete cds Length = 1711 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 343 atcagagatgataaggaagtggaagctaccattattaatggtaagggaacagagactggt 402 ||||| |||||||||||| ||||||| || ||| || | ||||| || || ||||| || Sbjct: 242 atcagggatgataaggaaatggaagcaacaattgttgacggtaatgggactgagacaggc 301 Query: 403 cacataattgtcacgactactggtggcaaaaatggtcagcc 443 |||||||| || || |||| |||||| | |||||| ||||| Sbjct: 302 cacataatagtgacaactattggtggtagaaatggccagcc 342
>gb|AY023405.1| Oryza sativa microsatellite MRG5730 containing (TAT)X16, genomic sequence Length = 248 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactactat 43 |||||||||||||||||||||| Sbjct: 151 gtagtagtagtagtactactat 172
>gb|AY022351.1| Oryza sativa microsatellite MRG4676 containing (AAT)X13, genomic sequence Length = 239 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactactat 43 |||||||||||||||||||||| Sbjct: 190 gtagtagtagtagtactactat 211
>emb|AL161617.12| Human DNA sequence from clone RP11-566K4 on chromosome 13, complete sequence Length = 51165 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 taaggaagtggaagctaccatt 375 |||||||||||||||||||||| Sbjct: 36676 taaggaagtggaagctaccatt 36655
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactactat 43 |||||||||||||||||||||| Sbjct: 17559100 gtagtagtagtagtactactat 17559121
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactactat 43 |||||||||||||||||||||| Sbjct: 171097 gtagtagtagtagtactactat 171118
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactactat 43 |||||||||||||||||||||| Sbjct: 29018 gtagtagtagtagtactactat 29039
>gb|AY684071.1| Hemignathus virens clone Hvir107 microsatellite sequence Length = 116 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 36 gtagtagtagtagtactacta 56
>ref|XM_642500.1| Dictyostelium discoideum hypothetical protein (DDB0216583), partial mRNA Length = 3324 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 2093 gtagtagtagtagtactacta 2073
>ref|XM_636240.1| Dictyostelium discoideum hypothetical protein (DDB0206470), partial mRNA Length = 3522 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 2495 gtagtagtagtagtactacta 2515
>gb|AC149164.2| Xenopus tropicalis clone ISB-3O21, complete sequence Length = 63312 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 gagatgataaggaagtggaag 367 ||||||||||||||||||||| Sbjct: 58820 gagatgataaggaagtggaag 58840
>gb|AC107732.11| Mus musculus chromosome 7, clone RP23-424E6, complete sequence Length = 194045 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 592 tgtatatggcttatttcattt 612 ||||||||||||||||||||| Sbjct: 126497 tgtatatggcttatttcattt 126477
>ref|XM_711931.1| Candida albicans SC5314 hypothetical protein (CaO19_12759), mRNA Length = 1749 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 1601 gtagtagtagtagtactacta 1621
>ref|XM_706538.1| Candida albicans SC5314 ribokinase (CaO19.13700), mRNA Length = 1206 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 206 gtagtagtagtagtactacta 226
>ref|XM_706371.1| Candida albicans SC5314 putative GTPase activating protein (CaO19.9364), mRNA Length = 4476 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 3401 gtagtagtagtagtactacta 3421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 3427 tagtagtagtagtactacta 3408
>ref|XM_706365.1| Candida albicans SC5314 putative anaphase-promoting complex subunit Cdc16 (CaO19.9358), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 734 gtagtagtagtagtactacta 714
>ref|XM_706354.1| Candida albicans SC5314 putative GTPase activating protein (CaO19.1798), mRNA Length = 4476 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 3401 gtagtagtagtagtactacta 3421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 3427 tagtagtagtagtactacta 3408
>ref|XM_706348.1| Candida albicans SC5314 putative anaphase-promoting complex subunit Cdc16 (CaO19.1792), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 734 gtagtagtagtagtactacta 714
>gb|AC122112.2| Bos taurus clone RP42-332L24, complete sequence Length = 21740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 ttatttcattttaataatctt 622 ||||||||||||||||||||| Sbjct: 19003 ttatttcattttaataatctt 18983
>gb|AC157608.10| Mus musculus chromosome 5, clone RP23-343F16, complete sequence Length = 204556 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 40704 gtagtagtagtagtactacta 40684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 40677 gtagtagtagtagtactacta 40697
>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence Length = 205816 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 87285 gtagtagtagtagtactacta 87265 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 87258 gtagtagtagtagtactacta 87278
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 ttatttcattttaataatctt 622 ||||||||||||||||||||| Sbjct: 1096530 ttatttcattttaataatctt 1096510
>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence Length = 183918 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 91173 gtagtagtagtagtactacta 91193
>gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome 7, complete sequence Length = 204757 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 157 gtagtagtagtagtactacta 137
>ref|XM_883663.1| Candida albicans SC5314 hypothetical protein (CaJ7.0147) partial mRNA Length = 5295 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 4637 gtagtagtagtagtactacta 4657 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 4663 tagtagtagtagtactacta 4644
>ref|XM_707392.1| Candida albicans SC5314 likely ribosomal eIF2-alpha kinase (GCN2) partial mRNA Length = 5295 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 4637 gtagtagtagtagtactacta 4657 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 4663 tagtagtagtagtactacta 4644
>gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, complete sequence Length = 181412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 tgtatatggcttatttcattt 612 ||||||||||||||||||||| Sbjct: 161473 tgtatatggcttatttcattt 161493
>gb|AC146564.2| Medicago truncatula clone mth2-67l12, complete sequence Length = 128650 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 tagtagtagtactactatctcagtt 50 |||||||||||||||||||| |||| Sbjct: 98787 tagtagtagtactactatctgagtt 98763
>gb|AC137510.33| Medicago truncatula clone mth2-8m7, complete sequence Length = 108759 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 tagtagtagtactactatctcagtt 50 |||||||||||||||||||| |||| Sbjct: 78895 tagtagtagtactactatctgagtt 78871
>ref|XM_967723.1| PREDICTED: Tribolium castaneum similar to CG14472-PA (LOC661572), mRNA Length = 15138 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 10964 gtagtagtagtagtactacta 10984
>emb|AL645790.8| Zebrafish DNA sequence from clone RP71-6L08 in linkage group 23 Contains the 3' part of a novel gene similar to CELSR (cadherin, EGF LAG seven-pass G-type receptor), part of a novel gene and a CpG island, complete sequence Length = 165257 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 115911 gtagtagtagtagtactacta 115931
>emb|AJ000732.1|ATAJ732 Arabidopsis thaliana ASKalpha gene Length = 8645 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 388 ggaacagagactggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaa 447 |||||||||||||| || || ||||| || |||| |||||| | |||||| || || ||| Sbjct: 5640 ggaacagagactggacatatcattgtgactactattggtggtagaaatggccaaccaaaa 5699 Query: 448 caggt 452 ||||| Sbjct: 5700 caggt 5704
>emb|CR392021.10| Zebrafish DNA sequence from clone CH211-126H20 in linkage group 5, complete sequence Length = 182008 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 151209 gtagtagtagtagtactacta 151229
>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence Length = 94766 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 88075 gtagtagtagtagtactacta 88055 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 88048 gtagtagtagtagtactacta 88068
>gb|AY937178.1| Neospora caninum isolate KBA1 microsatellite MS10 sequence Length = 260 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 107 gtagtagtagtagtactacta 87
>gb|AY937175.1| Neospora caninum isolate Nc-SHEEP microsatellite MS10 sequence Length = 249 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 99 gtagtagtagtagtactacta 79
>gb|AY937170.1| Neospora caninum isolate KBA2 microsatellite MS10 sequence Length = 290 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 119 gtagtagtagtagtactacta 99
>gb|AY937141.1| Neospora caninum isolate Nc-GER1 microsatellite MS10 sequence Length = 298 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 109 gtagtagtagtagtactacta 89
>gb|AY937128.1| Neospora caninum isolate Hammondia heydorni Berlin-1996 microsatellite MS10 sequence Length = 300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 130 gtagtagtagtagtactacta 110
>gb|AY937116.1| Neospora caninum isolate Nc-PV1 microsatellite MS10 sequence Length = 257 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 81 gtagtagtagtagtactacta 61
>gb|AY935198.1| Neospora caninum isolate Nc-Bahia microsatellite MS10 sequence Length = 241 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 81 gtagtagtagtagtactacta 61
>gb|AY935186.1| Neospora caninum isolate Nc-SweB1 microsatellite MS10 sequence Length = 274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 127 gtagtagtagtagtactacta 107
>gb|AY935174.1| Neospora caninum isolate Nc-Liv microsatellite MS10 sequence Length = 285 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 99 gtagtagtagtagtactacta 79
>gb|AC171140.2| Helobdella robusta clone CH306-1B2, complete sequence Length = 105143 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 90826 gtagtagtagtagtactacta 90806
>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome Length = 139342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 115668 gtagtagtagtagtactacta 115648
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 388 ggaacagagactggtcacataattgtcacgactactggtggcaaaaatggtcagccgaaa 447 |||||||||||||| || || ||||| || |||| |||||| | |||||| || || ||| Sbjct: 3064 ggaacagagactggacatatcattgtgactactattggtggtagaaatggccaaccaaaa 3005 Query: 448 caggt 452 ||||| Sbjct: 3004 caggt 3000
>gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence Length = 151538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 ttatttcattttaataatctt 622 ||||||||||||||||||||| Sbjct: 25775 ttatttcattttaataatctt 25755
>gb|AE004533.1| Pseudomonas aeruginosa PAO1, section 94 of 529 of the complete genome Length = 12967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 agaacagcagcggcaccagca 301 ||||||||||||||||||||| Sbjct: 7912 agaacagcagcggcaccagca 7892
>emb|BX663508.8| Zebrafish DNA sequence from clone CH211-144B6 in linkage group 22, complete sequence Length = 170295 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 126860 gtagtagtagtagtactacta 126840
>emb|BX511094.6| Zebrafish DNA sequence from clone CH211-137G12 in linkage group 19, complete sequence Length = 154360 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 12591 gtagtagtagtagtactacta 12571
>emb|AL929005.7| Zebrafish DNA sequence from clone CH211-223P8, complete sequence Length = 166364 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 39599 gtagtagtagtagtactacta 39619
>gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, complete sequence Length = 169442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 81432 gtagtagtagtagtactacta 81452
>gb|U31026.1|HSU31026 Hordeum spontaneum Nevo 03-331 5S rRNA genes, clone HSPO016, partial sequence Length = 455 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 345 gtagtagtagtagtactacta 365
>emb|AL929135.9| Zebrafish DNA sequence from clone CH211-125A22, complete sequence Length = 167531 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 116084 gtagtagtagtagtactacta 116104 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 116110 tagtagtagtagtactacta 116091
>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence Length = 215518 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 64460 gtagtagtagtagtactacta 64440
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactacta 42 ||||||||||||||||||||| Sbjct: 268768 gtagtagtagtagtactacta 268748 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 268742 tagtagtagtagtactacta 268761
>dbj|AB113574.1| Lotus japonicus mRNA for Ser/Thr protein kinase, complete cds, clone:LNZ031 Length = 1579 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 394 gagactggtcacataattgtcacgactactggtggcaaaaatggtcagccgaa 446 |||||||| || || |||||||| || | ||| |||| ||||||||||||||| Sbjct: 232 gagactggacatatcattgtcactaccattgggggcagaaatggtcagccgaa 284
>gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, complete sequence Length = 202147 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 16591 tagtagtagtagtactacta 16610
>ref|NM_121350.2| Arabidopsis thaliana unknown protein AT5G13470 mRNA, complete cds Length = 591 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 146 gtgttgagaagctaccagat 165
>ref|NM_187735.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2688 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactact 41 |||||||||||||||||||| Sbjct: 160 gtagtagtagtagtactact 141
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 137548 tagtagtagtagtactacta 137567
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 17031 tagtagtagtagtactacta 17050
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agtagtagtagtactactat 43 |||||||||||||||||||| Sbjct: 33603 agtagtagtagtactactat 33622
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 140211 tagtagtagtagtactacta 140192
>gb|AY808839.1| Schistosoma japonicum SJCHGC06475 protein mRNA, partial cds Length = 671 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 294 tagtagtagtagtactacta 275
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 agtagtagtactactatctcagtt 50 ||||||||||| |||||||||||| Sbjct: 12121066 agtagtagtacaactatctcagtt 12121089
>gb|AY466358.1| Litopenaeus vannamei microsatellite TUMXLV10.40 sequence Length = 634 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gtagtagtagtagtactactatct 45 |||||||||||| ||||||||||| Sbjct: 88 gtagtagtagtattactactatct 65
>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence Length = 200663 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ctttgttctcatttgtttgt 509 |||||||||||||||||||| Sbjct: 158057 ctttgttctcatttgtttgt 158038
>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete sequence Length = 259474 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gagaagctaccagatcagat 329 |||||||||||||||||||| Sbjct: 18032 gagaagctaccagatcagat 18013
>gb|AC118038.15| Mus musculus chromosome 15, clone RP23-87G17, complete sequence Length = 209907 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 25311 tagtagtagtagtactacta 25292
>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete sequence Length = 176782 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 169229 tagtagtagtagtactacta 169248
>ref|XM_949228.1| Theileria annulata strain Ankara hypothetical protein (TA20800) partial mRNA Length = 4725 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 2920 tagtagtagtagtactacta 2901
>gb|BT010531.1| Arabidopsis thaliana At5g13470 gene, complete cds Length = 480 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 146 gtgttgagaagctaccagat 165
>emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on chromosome 6q21 Contains the 3' end of the WISP3 gene for WNT1 inducible signaling pathway protein 3, the gene for epsilon tubulin, two novel genes, the 3' end of the LAMA4 gene for laminin alpha 4, the 5' end of a novel gene and a CpG island, complete sequence Length = 190778 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agtagtagtagtactactat 43 |||||||||||||||||||| Sbjct: 15508 agtagtagtagtactactat 15527
>emb|Z12834.1|LEPOOXB L.esculentum gene for polyphenol oxidase Length = 3926 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 1996 tagtagtagtagtactacta 2015
>emb|X68411.1|AMMSK1A A.medicago MSK-1 mRNA for protein kinase Length = 1613 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 388 ggaacagagactggtcacataattgtcacgactactggtggcaaaaatggtcagcc 443 ||||| ||||| || || || |||||||| |||| |||||| | |||||||||||| Sbjct: 217 ggaacggagacaggacatatcattgtcactactattggtggtagaaatggtcagcc 272
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 66425 tagtagtagtagtactacta 66444
>emb|AL713926.9| Mouse DNA sequence from clone RP23-32H19 on chromosome 11 Contains the Ppp3r1 gene for protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B, type I), two novel genes and two CpG islands, complete sequence Length = 86007 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agggcggagcgagcgcgggg 136 |||||||||||||||||||| Sbjct: 874 agggcggagcgagcgcgggg 855
>emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chromosome 11 Contains the 5' end of the Ppp3r1 gene for protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B, type I), a ribosomal protein L39 (Rpl39) pseudogene, a novel gene, the Plek gene for pleckstrin, a CUB domain and EGF-like repeat containing (Cegf) protein pseudogene and a CpG island, complete sequence Length = 201805 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 agggcggagcgagcgcgggg 136 |||||||||||||||||||| Sbjct: 1127 agggcggagcgagcgcgggg 1146
>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project) Length = 90472 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 1588 gtgttgagaagctaccagat 1607
>emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, BAC clone T22N19 (ESSA project) Length = 68948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 62288 gtgttgagaagctaccagat 62307
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 Length = 349751 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 308471 tagtagtagtagtactacta 308490
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 agtagtagtactactatctcagtt 50 ||||||||||| |||||||||||| Sbjct: 13675 agtagtagtacaactatctcagtt 13698
>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence Length = 92727 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 10093 tagtagtagtagtactacta 10074
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cagcagcggcaccagcatgg 304 |||||||||||||||||||| Sbjct: 4612927 cagcagcggcaccagcatgg 4612908
>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence Length = 191954 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 atcagatgaacgatttgaag 342 |||||||||||||||||||| Sbjct: 39856 atcagatgaacgatttgaag 39837
>gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, complete sequence Length = 171083 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 cttatttcattttaataatc 620 |||||||||||||||||||| Sbjct: 79984 cttatttcattttaataatc 79965
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 49093 tagtagtagtagtactacta 49074
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 1407401 tagtagtagtagtactacta 1407420
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 15604566 tagtagtagtagtactacta 15604547
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 8805106 tagtagtagtagtactacta 8805125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 agtagtagtactactatctcagtt 50 ||||||||||| |||||||||||| Sbjct: 12117829 agtagtagtacaactatctcagtt 12117852
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 agtagtagtactactatctcagtt 50 ||||||||||| |||||||||||| Sbjct: 141646 agtagtagtacaactatctcagtt 141669
>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12, complete sequence Length = 130499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 110200 tagtagtagtagtactacta 110219
>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence Length = 195342 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gagaagctaccagatcagat 329 |||||||||||||||||||| Sbjct: 58176 gagaagctaccagatcagat 58195
>emb|BX833806.1|CNS09Z7Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 713 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 175 gtgttgagaagctaccagat 194
>gb|AC110421.5| Homo sapiens BAC clone RP11-720M18 from 2, complete sequence Length = 16796 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 cctttgttctcatttgtttg 508 |||||||||||||||||||| Sbjct: 16750 cctttgttctcatttgtttg 16731
>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence Length = 198278 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactact 41 |||||||||||||||||||| Sbjct: 96590 gtagtagtagtagtactact 96609
>gb|AC092837.5| Homo sapiens BAC clone RP11-137J9 from 2, complete sequence Length = 147820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 cctttgttctcatttgtttg 508 |||||||||||||||||||| Sbjct: 1954 cctttgttctcatttgtttg 1935
>gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, complete sequence Length = 185461 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ttgtctgaatgcatgatttg 525 |||||||||||||||||||| Sbjct: 71311 ttgtctgaatgcatgatttg 71292
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactact 41 |||||||||||||||||||| Sbjct: 138571 gtagtagtagtagtactact 138590
>dbj|AK176506.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-02-L13 Length = 701 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgttgagaagctaccagat 324 |||||||||||||||||||| Sbjct: 184 gtgttgagaagctaccagat 203
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 125421 tagtagtagtagtactacta 125402
>dbj|AK111156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-G11, full insert sequence Length = 2801 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gtagtagtagtagtactact 41 |||||||||||||||||||| Sbjct: 2344 gtagtagtagtagtactact 2363
>emb|CR931778.23| Zebrafish DNA sequence from clone DKEY-265O4 in linkage group 4, complete sequence Length = 64016 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tagtagtagtagtactacta 42 |||||||||||||||||||| Sbjct: 60710 tagtagtagtagtactacta 60691 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,645,977 Number of Sequences: 3902068 Number of extensions: 5645977 Number of successful extensions: 202564 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 201289 Number of HSP's gapped (non-prelim): 1249 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)