Clone Name | baalf14 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464321.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 75 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 134 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 135 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 194 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 195 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 254 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 255 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 314 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 315 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 374 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 375 gcttggcattcacttt 390
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 4103513 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 4103572 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 4103573 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 4103632 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 4103633 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 4103692 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 4103693 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 4103752 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 4103753 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 4103812 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 4103813 gcttggcattcacttt 4103828
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 13527 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 13586 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 13587 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 13646 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 13647 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 13706 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 13707 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 13766 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 13767 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 13826 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 13827 gcttggcattcacttt 13842
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 150179 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 150238 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 150239 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 150298 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 150299 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 150358 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 150359 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 150418 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 150419 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 150478 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 150479 gcttggcattcacttt 150494
>dbj|AK121973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108I05, full insert sequence Length = 1381 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Minus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 1198 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 1139 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 1138 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 1079 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 1078 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 1019 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 1018 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 959 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 958 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 899 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 898 gcttggcattcacttt 883
>emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) mRNA for putative sodium transporter (hkt6 gene) Length = 1679 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 130 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 189 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 190 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 249 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 250 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 309 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 310 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 369 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 370 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 429 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 430 gcttggcattcacttt 445
>emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) partial hkt6 gene for putative sodium transporter, exons 1-3 Length = 3157 Score = 258 bits (130), Expect = 2e-65 Identities = 269/316 (85%) Strand = Plus / Plus Query: 75 ttttgccaaatctgcacagcaatctatgaaatactcctgccagttcatctgccacacaaa 134 |||| |||||||||||||| | ||||| |||||||||| ||||||||||| ||| | || Sbjct: 551 ttttaccaaatctgcacagaagtctataaaatactccttccagttcatctaccaaaacaa 610 Query: 135 cccactctttatccaagtcacttatttcgccttgatctcatttgctggatatgaagctct 194 ||||||||| |||| || |||| || ||| ||||||| ||||||||||||| | |||| Sbjct: 611 tccactctttgtccatgtagcttactttgccctgatctcctttgctggatatggatctct 670 Query: 195 gaaggtccttaactcccaagataagtcaaatactctgaaagacttanacgtgttgtttac 254 |||||||| || | | ||| ||||||||||||||||||||||| ||||| | ||||| Sbjct: 671 aaaggtcctcaagccacgagacaagtcaaatactctgaaagacttggacgtgctatttac 730 Query: 255 ttctgtctctgcatcaactgtctcaagcatggctactgttgaaatggaggaattctcaag 314 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 731 ttccgtatctgcatcaactgtttcaagcatggctactgttgaaatggaggatttctcaag 790 Query: 315 caaacaactctggattttggcaattttaatgctgattggtagngaagtattcacttcaat 374 | ||||||||| ||||| | |||||||||||||||||| | || |||||||||||||| Sbjct: 791 cgctcaactctgggttttgactattttaatgctgattggtggtgaggtattcacttcaat 850 Query: 375 acttggtcttcacttt 390 ||||| |||||||| Sbjct: 851 gcttggcattcacttt 866
>emb|AL513284.12| Human DNA sequence from clone RP11-518D3 on chromosome 1 Contains the 3' end of a novel gene (FLJ42034, FLJ38762), the gene for a putative NFkB activating protein 373, a C-terminal binding protein 2 (CTBP2) pseudogene, a ribosomal protein S7 (RPS7) pseudogene and a CpG island, complete sequence Length = 169972 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 actctttatccaagtcacttatt 160 ||||||||||||||||||||||| Sbjct: 122576 actctttatccaagtcacttatt 122598
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 449 ttgatattgaatctattaatgtt 471 ||||||||||||||||||||||| Sbjct: 65574 ttgatattgaatctattaatgtt 65596
>gb|AY231175.1| Mesembryanthemum crystallinum high affinity potassium transporter 2 (HKT2) mRNA, complete cds Length = 2230 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 catggctactgttgaaatggagg 304 ||||||||||||||||||||||| Sbjct: 342 catggctactgttgaaatggagg 364
>emb|AL928692.9| Zebrafish DNA sequence from clone CH211-208D15 in linkage group 12, complete sequence Length = 215891 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 449 ttgatattgaatctattaatgtt 471 ||||||||||||||||||||||| Sbjct: 204923 ttgatattgaatctattaatgtt 204901
>gb|AC130807.30| Medicago truncatula clone mth2-13o20, complete sequence Length = 143832 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggatt 330 |||||||||||||||||||||| Sbjct: 59679 ctcaagcaaacaactctggatt 59658 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 57672 ctcaagcaaacaactctggat 57652
>gb|AC135416.39| Medicago truncatula clone mth2-24n16, complete sequence Length = 126278 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggatt 330 |||||||||||||||||||||| Sbjct: 117506 ctcaagcaaacaactctggatt 117527 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 119513 ctcaagcaaacaactctggat 119533
>gb|AC154867.1| Medicago truncatula chromosome 2 BAC clone mte1-6j20, complete sequence Length = 109340 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 97009 ctcaagcaaacaactctggat 96989
>ref|XM_522548.1| PREDICTED: Pan troglodytes similar to sno, strawberry notch homolog 1; MOP-3 (LOC467148), mRNA Length = 4023 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1258 aaacaactctggcttttggcaattt 1234
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 143618 aaacaactctggcttttggcaattt 143642
>gb|BC021875.1| Mus musculus sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:4212192), partial cds Length = 2389 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1428 aaacaactctggcttttggcaattt 1404
>ref|XM_001000405.1| PREDICTED: Mus musculus sno, strawberry notch homolog 1 (Drosophila) (Sbno1), mRNA Length = 4721 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1482 aaacaactctggcttttggcaattt 1458
>ref|XM_355637.5| PREDICTED: Mus musculus sno, strawberry notch homolog 1 (Drosophila), transcript variant 1 (Sbno1), mRNA Length = 10071 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1482 aaacaactctggcttttggcaattt 1458
>ref|XM_991925.1| PREDICTED: Mus musculus sno, strawberry notch homolog 1 (Drosophila) (Sbno1), mRNA Length = 4804 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1571 aaacaactctggcttttggcaattt 1547
>gb|AC145512.33| Medicago truncatula clone mth2-19o18, complete sequence Length = 145524 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 29648 ctcaagcaaacaactctggat 29628
>gb|AC149473.33| Medicago truncatula clone mth2-119h6, complete sequence Length = 128535 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 48042 ctcaagcaaacaactctggat 48022
>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE Length = 111128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 73991 ctcaagcaaacaactctggat 73971
>gb|BC023706.1| Mus musculus sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5345737), partial cds Length = 1545 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 850 aaacaactctggcttttggcaattt 826
>gb|AY364255.1| Homo sapiens clone peg2047 MOP3 (SBNO1) mRNA, complete cds Length = 2201 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1416 aaacaactctggcttttggcaattt 1392
>gb|AC141865.27| Medicago truncatula clone mth2-7b19, complete sequence Length = 117380 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 98190 ctcaagcaaacaactctggat 98210
>gb|AC144805.9| Medicago truncatula clone mth2-72a11, complete sequence Length = 78128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 29054 ctcaagcaaacaactctggat 29074
>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence Length = 140874 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 3240 ctcaagcaaacaactctggat 3260
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 93377 ctcaagcaaacaactctggat 93397
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 106339 ctcaagcaaacaactctggat 106319 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 103134 ctcaagcaaacaactctggat 103154 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 95284 ctcaagcaaacaactctggat 95304
>gb|AC136141.25| Medicago truncatula clone mth2-12m5, complete sequence Length = 120400 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 58779 ctcaagcaaacaactctggat 58759 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 23053 ctcaagcaaacaactctggat 23033
>gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete sequence Length = 115185 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 19745 ctcaagcaaacaactctggat 19765
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 39245 ctcaagcaaacaactctggat 39225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 31395 ctcaagcaaacaactctggat 31375 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 28190 ctcaagcaaacaactctggat 28210
>gb|AC146806.13| Medicago truncatula clone mth2-151p24, complete sequence Length = 122167 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 122111 ctcaagcaaacaactctggat 122131
>gb|AC149493.7| Medicago truncatula clone mth2-116k17, complete sequence Length = 105229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 75985 ctcaagcaaacaactctggat 76005
>gb|AC152405.15| Medicago truncatula clone mth2-49f2, complete sequence Length = 126818 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 45615 ctcaagcaaacaactctggat 45635
>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence Length = 113836 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 44566 ctcaagcaaacaactctggat 44546
>gb|AC140067.14| Medicago truncatula clone mth2-25n14, complete sequence Length = 116196 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 97915 ctcaagcaaacaactctggat 97935
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 71756 ctcaagcaaacaactctggat 71776
>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence Length = 125478 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 71575 ctcaagcaaacaactctggat 71595
>gb|AC146631.27| Medicago truncatula clone mth2-7g1, complete sequence Length = 132372 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 35843 ctcaagcaaacaactctggat 35863
>ref|NM_018183.2| Homo sapiens sno, strawberry notch homolog 1 (Drosophila) (SBNO1), mRNA Length = 4179 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1414 aaacaactctggcttttggcaattt 1390
>gb|BC030544.1| Homo sapiens sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5001589), containing frame-shift errors Length = 2511 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1548 aaacaactctggcttttggcaattt 1524
>gb|AC137767.16| Homo sapiens 12 BAC RP13-942N8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86027 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 79387 aaacaactctggcttttggcaattt 79363
>gb|AC137631.2| Homo sapiens 12 BAC RP11-1018F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55265 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 48626 aaacaactctggcttttggcaattt 48602
>emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e11, COMPLETE SEQUENCE Length = 117393 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 67735 ctcaagcaaacaactctggat 67715
>gb|AC151673.24| Medicago truncatula clone mth2-2k12, complete sequence Length = 125859 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 121940 ctcaagcaaacaactctggat 121920
>gb|AC151726.31| Medicago truncatula clone mth2-22e22, complete sequence Length = 127018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 69488 ctcaagcaaacaactctggat 69468
>gb|AC149492.14| Medicago truncatula clone mth2-99d10, complete sequence Length = 124792 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 13664 ctcaagcaaacaactctggat 13644
>dbj|AK122703.1| Homo sapiens cDNA FLJ16176 fis, clone BRHIP2007305, highly similar to Homo sapiens mRNA for MOP-3 Length = 2905 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1970 aaacaactctggcttttggcaattt 1946
>gb|AC151916.19| Medicago truncatula clone mth2-57h18, complete sequence Length = 89907 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 48023 ctcaagcaaacaactctggat 48043
>gb|AC146719.32| Medicago truncatula clone mth2-17f11, complete sequence Length = 127364 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 29111 ctcaagcaaacaactctggat 29091
>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence Length = 134249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 131140 ctcaagcaaacaactctggat 131120
>dbj|AK001695.1| Homo sapiens cDNA FLJ10833 fis, clone NT2RP4001206, moderately similar to Drosophila melanogaster strawberry notch mRNA Length = 2484 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1552 aaacaactctggcttttggcaattt 1528
>dbj|AK133096.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930572D06 product:sno, strawberry notch homolog 1 (Drosophila), full insert sequence Length = 4242 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 305 aaacaactctggcttttggcaattt 281
>gb|AC107934.3| Homo sapiens chromosome 8, clone RP11-960H2, complete sequence Length = 161638 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 atctattaatgttacaaactt 479 ||||||||||||||||||||| Sbjct: 24320 atctattaatgttacaaactt 24300
>dbj|AK164542.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330036E08 product:sno, strawberry notch homolog 1 (Drosophila), full insert sequence Length = 5298 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 2922 aaacaactctggcttttggcaattt 2898
>gb|AC044814.6| Homo sapiens chromosome 8, clone RP11-688B7, complete sequence Length = 186369 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 atctattaatgttacaaactt 479 ||||||||||||||||||||| Sbjct: 123034 atctattaatgttacaaactt 123054
>gb|AC155883.2| Medicago truncatula chromosome 2 BAC clone mte1-80o18, complete sequence Length = 97452 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 23858 ctcaagcaaacaactctggat 23878
>dbj|AK165852.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730007E20 product:sno, strawberry notch homolog 1 (Drosophila), full insert sequence Length = 2101 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1421 aaacaactctggcttttggcaattt 1397
>dbj|AB168306.1| Macaca fascicularis testis cDNA clone: QtsA-11104, similar to human sno, strawberry notch homolog 1 (Drosophila) (SBNO1),mRNA, RefSeq: NM_018183.2 Length = 2516 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1557 aaacaactctggcttttggcaattt 1533
>gb|AC149208.4| Medicago truncatula chromosome 7 BAC clone mth2-156l8, complete sequence Length = 116004 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 79005 ctcaagcaaacaactctggat 79025
>dbj|AK077133.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933409M12 product:CDNA FLJ10833 FIS, CLONE NT2RP4001206, MODERATELY SIMILAR TO DROSOPHILA MELANOGASTER STRAWBERRY NOTCH MRNA (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2430 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1488 aaacaactctggcttttggcaattt 1464
>dbj|AB206403.1| Bombyx mori mRNA for FK506-binding protein FKBP59 homologue, complete cds Length = 1356 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 tgaaatactcctgccagttcatctg 125 ||||||||||||| ||||||||||| Sbjct: 900 tgaaatactcctgtcagttcatctg 924
>gb|AC157506.3| Medicago truncatula chromosome 7 BAC clone mth2-50e7, complete sequence Length = 127666 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 125571 ctcaagcaaacaactctggat 125591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 74027 ctcaagcaaacaactctggat 74007
>dbj|AB188811.1| Mus musculus mSno1 mRNA for strawberry notch homolog 1, partial cds Length = 4170 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1411 aaacaactctggcttttggcaattt 1387
>emb|CT863711.2| Medicago truncatula chromosome 5 clone mth2-152j13, COMPLETE SEQUENCE Length = 108806 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 46809 ctcaagcaaacaactctggat 46789
>emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e2, COMPLETE SEQUENCE Length = 122895 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 27195 ctcaagcaaacaactctggat 27215
>emb|CR954191.2| Medicago truncatula chromosome 5 clone mte1-26e13, COMPLETE SEQUENCE Length = 96667 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 79039 ctcaagcaaacaactctggat 79059
>emb|CT030243.8| M.truncatula DNA sequence from clone MTH2-72K5 on chromosome 3, complete sequence Length = 111036 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ctcaagcaaacaactctggat 329 ||||||||||||||||||||| Sbjct: 11908 ctcaagcaaacaactctggat 11928
>gb|BC106156.1| Mus musculus sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5011186), partial cds Length = 2287 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1541 aaacaactctggcttttggcaattt 1517
>dbj|AB014772.1| Homo sapiens mRNA for MOP-3, complete cds Length = 4179 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaacaactctggattttggcaattt 340 |||||||||||| |||||||||||| Sbjct: 1414 aaacaactctggcttttggcaattt 1390
>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence Length = 203498 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 agatggagcgtcattttccg 526 |||||||||||||||||||| Sbjct: 111859 agatggagcgtcattttccg 111840
>ref|XM_632252.1| Dictyostelium discoideum hypothetical protein (DDB0187290), partial mRNA Length = 2250 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgatattgaatctattaatg 469 |||||||||||||||||||| Sbjct: 1512 tgatattgaatctattaatg 1531
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 tattgaatctattaatgtta 472 |||||||||||||||||||| Sbjct: 227771 tattgaatctattaatgtta 227752
>gb|AC146932.3| Sus scrofa clone RP44-244C10, complete sequence Length = 130764 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 tattgaatctattaatgtta 472 |||||||||||||||||||| Sbjct: 116438 tattgaatctattaatgtta 116419
>emb|AL355576.14| Human DNA sequence from clone RP11-305F4 on chromosome 13, complete sequence Length = 148744 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cacacaaacccactctttat 146 |||||||||||||||||||| Sbjct: 31688 cacacaaacccactctttat 31669
>emb|AL356475.11| Human DNA sequence from clone RP11-332H17 on chromosome 1 Contains the 5' end of the KIFAP3 gene for kinesin-associated protein 3 and a novel gene, complete sequence Length = 108047 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ttttggcaattttaatgctg 348 |||||||||||||||||||| Sbjct: 23957 ttttggcaattttaatgctg 23938
>gb|AC026225.5| Homo sapiens chromosome 10 clone RP11-78C6, complete sequence Length = 201173 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 atctattaatgttacaaact 478 |||||||||||||||||||| Sbjct: 93760 atctattaatgttacaaact 93779
>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence Length = 148110 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tgttgtttacttctgtctct 264 |||||||||||||||||||| Sbjct: 49557 tgttgtttacttctgtctct 49576
>gb|AC097528.2| Homo sapiens BAC clone RP11-662G20 from 4, complete sequence Length = 170412 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tctggattttggcaattttaatgc 346 ||||||||||||| |||||||||| Sbjct: 48413 tctggattttggccattttaatgc 48390
>gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, complete sequence Length = 169232 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 323 tctggattttggcaattttaatgctgat 350 ||||||||||||| |||||||| ||||| Sbjct: 148881 tctggattttggccattttaatactgat 148854
>gb|BC108138.1| Bos taurus ATP citrate lyase, mRNA (cDNA clone MGC:128987 IMAGE:8120874), complete cds Length = 4255 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aaatactcctgccagttcat 122 |||||||||||||||||||| Sbjct: 2684 aaatactcctgccagttcat 2703
>gb|AC144942.4| Mus musculus BAC clone RP23-402N21 from 10, complete sequence Length = 200875 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 attcacttcaatacttggtc 382 |||||||||||||||||||| Sbjct: 55817 attcacttcaatacttggtc 55836
>emb|BX957244.15| Zebrafish DNA sequence from clone CH211-13C6 in linkage group 19, complete sequence Length = 162321 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 ctgccacacaaacccactctttat 146 ||||||||||||||||||| |||| Sbjct: 98846 ctgccacacaaacccactcattat 98869
>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete sequence Length = 314743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 agatggagcgtcattttccg 526 |||||||||||||||||||| Sbjct: 54744 agatggagcgtcattttccg 54725
>dbj|AP002962.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L8, complete sequence Length = 160222 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 atctattaatgttacaaact 478 |||||||||||||||||||| Sbjct: 155917 atctattaatgttacaaact 155898
>dbj|AP000665.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-46G18, complete sequences Length = 103829 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 atctattaatgttacaaact 478 |||||||||||||||||||| Sbjct: 51557 atctattaatgttacaaact 51538
>ref|NM_001037457.1| Bos taurus ATP citrate lyase (ACLY), mRNA Length = 4255 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aaatactcctgccagttcat 122 |||||||||||||||||||| Sbjct: 2684 aaatactcctgccagttcat 2703
>gb|AC171734.1| Lycopersicon esculentum chromosome 11 clone C11HBa0064J13, complete sequence Length = 118649 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tgcatcaactgtctcaagca 283 |||||||||||||||||||| Sbjct: 43528 tgcatcaactgtctcaagca 43547
>emb|AL683815.13| Mouse DNA sequence from clone RP23-319N7 on chromosome 11, complete sequence Length = 39784 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gccaccaaattgtcctattt 77 |||||||||||||||||||| Sbjct: 11794 gccaccaaattgtcctattt 11775 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,945,999 Number of Sequences: 3902068 Number of extensions: 4945999 Number of successful extensions: 89060 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88867 Number of HSP's gapped (non-prelim): 193 length of query: 535 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 512 effective length of database: 17,143,297,704 effective search space: 8777368424448 effective search space used: 8777368424448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)