ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalf10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477400.1| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
3dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AK102876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
5ref|NM_114191.3| Arabidopsis thaliana zinc ion binding AT3G43230... 68 3e-08
6gb|AY096434.1| Arabidopsis thaliana unknown protein (At3g43230) ... 68 3e-08
7gb|AY070053.1| Arabidopsis thaliana unknown protein (At3g43230) ... 68 3e-08
8emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BA... 68 3e-08
9gb|AY084416.1| Arabidopsis thaliana clone 107823 mRNA, complete ... 68 3e-08
10gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, co... 52 0.002
11gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome... 52 0.002
12emb|BX823858.1|CNS0A7E1 Arabidopsis thaliana Full-length cDNA Co... 44 0.48
13ref|NM_077264.1| Caenorhabditis elegans C17G1.2 (C17G1.2) mRNA, ... 42 1.9
14gb|AC155948.12| Mus musculus 6 BAC RP24-98H19 (Roswell Park Canc... 42 1.9
15emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, comple... 42 1.9
16gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, c... 40 7.5
17gb|AC147566.2| Mus musculus BAC clone RP23-106L10 from chromosom... 40 7.5
18gb|AC153360.6| Mus musculus BAC clone RP23-321I6 from chromosome... 40 7.5
19emb|AL135933.11| Human DNA sequence from clone RP4-774E4 on chro... 40 7.5
20emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 ... 40 7.5
21gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, c... 40 7.5
22emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 7.5
23gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.5
24gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, comp... 40 7.5
25gb|AC068388.7| Homo sapiens chromosome 3, clone RP11-296M9, comp... 40 7.5
26gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence 40 7.5
27gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, com... 40 7.5
28ref|XM_628533.1| Cryptosporidium parvum Iowa II RNA polymerase b... 40 7.5
29emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in... 40 7.5
30gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, comp... 40 7.5
31gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, co... 40 7.5
32gb|AC147641.3| Mus musculus BAC clone RP23-43L22 from 14, comple... 40 7.5
33emb|AL626776.15| Mouse DNA sequence from clone RP23-73N17 on chr... 40 7.5 
>ref|XM_477400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2122

 Score =  208 bits (105), Expect = 1e-50
 Identities = 276/333 (82%)
 Strand = Plus / Plus

                                                                       
Query: 221 ggcagaaaagccagtaaacattagaaacctgctgggtggcatagttgctatcattggtcg 280
           |||||| ||||| |||||| ||||||| |||||||||||  || |||| |||||  ||||
Sbjct: 650 ggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcg 709

                                                                       
Query: 281 cacttgcaaaaatgatgaaattcaacaatcaaaggacactaagagtagcgtctcattctt 340
                ||||||||  |||||||||||   ||||||||||||||  ||| ||| |||||||
Sbjct: 710 tggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattctt 769

                                                                       
Query: 341 ggggtcaagtagtgatggagatacattcttgcatacctcagtctacgcaccaagtgctcc 400
            |||||| |||| |||||||| |||||||||||  |||||||||| |  |||||||||||
Sbjct: 770 agggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctcc 829

                                                                       
Query: 401 tccattgcttgatgaagaagccttgagttacaatatttatagggttgttttagaggcaga 460
            ||||||||||| ||||||||  ||| ||||||| | |||||||||||  | || |||||
Sbjct: 830 accattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcaga 889

                                                                       
Query: 461 accaccagaatggctgcccgatagttatgctgactcgtgcatgcagtgttctgcttcttt 520
           ||||||||||||| | || |||||||||||| |||| |||||||| ||  ||||||||||
Sbjct: 890 accaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttt 949

                                            
Query: 521 cactgccattacttgtggaaggcatcattgtcg 553
            ||||   ||||| |||||||||||||||||||
Sbjct: 950 tactgttgttactcgtggaaggcatcattgtcg 982



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 9   atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 67
           ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 432 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 490
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  208 bits (105), Expect = 1e-50
 Identities = 276/333 (82%)
 Strand = Plus / Plus

                                                                            
Query: 221      ggcagaaaagccagtaaacattagaaacctgctgggtggcatagttgctatcattggtcg 280
                |||||| ||||| |||||| ||||||| |||||||||||  || |||| |||||  ||||
Sbjct: 10097337 ggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcg 10097396

                                                                            
Query: 281      cacttgcaaaaatgatgaaattcaacaatcaaaggacactaagagtagcgtctcattctt 340
                     ||||||||  |||||||||||   ||||||||||||||  ||| ||| |||||||
Sbjct: 10097397 tggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattctt 10097456

                                                                            
Query: 341      ggggtcaagtagtgatggagatacattcttgcatacctcagtctacgcaccaagtgctcc 400
                 |||||| |||| |||||||| |||||||||||  |||||||||| |  |||||||||||
Sbjct: 10097457 agggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctcc 10097516

                                                                            
Query: 401      tccattgcttgatgaagaagccttgagttacaatatttatagggttgttttagaggcaga 460
                 ||||||||||| ||||||||  ||| ||||||| | |||||||||||  | || |||||
Sbjct: 10097517 accattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcaga 10097576

                                                                            
Query: 461      accaccagaatggctgcccgatagttatgctgactcgtgcatgcagtgttctgcttcttt 520
                ||||||||||||| | || |||||||||||| |||| |||||||| ||  ||||||||||
Sbjct: 10097577 accaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttt 10097636

                                                 
Query: 521      cactgccattacttgtggaaggcatcattgtcg 553
                 ||||   ||||| |||||||||||||||||||
Sbjct: 10097637 tactgttgttactcgtggaaggcatcattgtcg 10097669



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 9        atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 67
                ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 10097119 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 10097177
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>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002J01
          Length = 130152

 Score =  208 bits (105), Expect = 1e-50
 Identities = 276/333 (82%)
 Strand = Plus / Plus

                                                                         
Query: 221   ggcagaaaagccagtaaacattagaaacctgctgggtggcatagttgctatcattggtcg 280
             |||||| ||||| |||||| ||||||| |||||||||||  || |||| |||||  ||||
Sbjct: 70013 ggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcg 70072

                                                                         
Query: 281   cacttgcaaaaatgatgaaattcaacaatcaaaggacactaagagtagcgtctcattctt 340
                  ||||||||  |||||||||||   ||||||||||||||  ||| ||| |||||||
Sbjct: 70073 tggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattctt 70132

                                                                         
Query: 341   ggggtcaagtagtgatggagatacattcttgcatacctcagtctacgcaccaagtgctcc 400
              |||||| |||| |||||||| |||||||||||  |||||||||| |  |||||||||||
Sbjct: 70133 agggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctcc 70192

                                                                         
Query: 401   tccattgcttgatgaagaagccttgagttacaatatttatagggttgttttagaggcaga 460
              ||||||||||| ||||||||  ||| ||||||| | |||||||||||  | || |||||
Sbjct: 70193 accattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcaga 70252

                                                                         
Query: 461   accaccagaatggctgcccgatagttatgctgactcgtgcatgcagtgttctgcttcttt 520
             ||||||||||||| | || |||||||||||| |||| |||||||| ||  ||||||||||
Sbjct: 70253 accaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttt 70312

                                              
Query: 521   cactgccattacttgtggaaggcatcattgtcg 553
              ||||   ||||| |||||||||||||||||||
Sbjct: 70313 tactgttgttactcgtggaaggcatcattgtcg 70345



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9     atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 67
             ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 69795 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 69853
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>dbj|AK102876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112D24, full
           insert sequence
          Length = 2122

 Score =  208 bits (105), Expect = 1e-50
 Identities = 276/333 (82%)
 Strand = Plus / Plus

                                                                       
Query: 221 ggcagaaaagccagtaaacattagaaacctgctgggtggcatagttgctatcattggtcg 280
           |||||| ||||| |||||| ||||||| |||||||||||  || |||| |||||  ||||
Sbjct: 650 ggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcg 709

                                                                       
Query: 281 cacttgcaaaaatgatgaaattcaacaatcaaaggacactaagagtagcgtctcattctt 340
                ||||||||  |||||||||||   ||||||||||||||  ||| ||| |||||||
Sbjct: 710 tggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattctt 769

                                                                       
Query: 341 ggggtcaagtagtgatggagatacattcttgcatacctcagtctacgcaccaagtgctcc 400
            |||||| |||| |||||||| |||||||||||  |||||||||| |  |||||||||||
Sbjct: 770 agggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctcc 829

                                                                       
Query: 401 tccattgcttgatgaagaagccttgagttacaatatttatagggttgttttagaggcaga 460
            ||||||||||| ||||||||  ||| ||||||| | |||||||||||  | || |||||
Sbjct: 830 accattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcaga 889

                                                                       
Query: 461 accaccagaatggctgcccgatagttatgctgactcgtgcatgcagtgttctgcttcttt 520
           ||||||||||||| | || |||||||||||| |||| |||||||| ||  ||||||||||
Sbjct: 890 accaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttt 949

                                            
Query: 521 cactgccattacttgtggaaggcatcattgtcg 553
            ||||   ||||| |||||||||||||||||||
Sbjct: 950 tactgttgttactcgtggaaggcatcattgtcg 982



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 9   atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 67
           ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 432 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 490
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>ref|NM_114191.3| Arabidopsis thaliana zinc ion binding AT3G43230 mRNA, complete cds
          Length = 1864

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 498 tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
           ||||||||||||||| || |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 721 tgcatgcagtgttctactccttttactgcaattacgtgtggtaggcatcattgtcggt 778
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>gb|AY096434.1| Arabidopsis thaliana unknown protein (At3g43230) mRNA, complete cds
          Length = 1489

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 498 tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
           ||||||||||||||| || |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 541 tgcatgcagtgttctactccttttactgcaattacgtgtggtaggcatcattgtcggt 598
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>gb|AY070053.1| Arabidopsis thaliana unknown protein (At3g43230) mRNA, complete cds
          Length = 1716

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 498 tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
           ||||||||||||||| || |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 674 tgcatgcagtgttctactccttttactgcaattacgtgtggtaggcatcattgtcggt 731
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>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15
          Length = 110800

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 498   tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
             ||||||||||||||| || |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 43955 tgcatgcagtgttctactccttttactgcaattacgtgtggtaggcatcattgtcggt 44012
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>gb|AY084416.1| Arabidopsis thaliana clone 107823 mRNA, complete sequence
          Length = 1806

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 498 tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
           ||||||||||||||| || |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 722 tgcatgcagtgttctactccttttactgcaattacgtgtggtaggcatcattgtcggt 779
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>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 180    tatgaatgccctgatgactattggga 205
              ||||||||||||||||||||||||||
Sbjct: 203011 tatgaatgccctgatgactattggga 202986
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>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 180   tatgaatgccctgatgactattggga 205
             ||||||||||||||||||||||||||
Sbjct: 98051 tatgaatgccctgatgactattggga 98026
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>emb|BX823858.1|CNS0A7E1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZD10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1764

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 498 tgcatgcagtgttctgcttctttcactgccattacttgtggaaggcatcattgtcggt 555
           ||||||||||||||| || ||||  |||| ||  | ||||| ||||||||||||||||
Sbjct: 649 tgcatgcagtgttctactccttttgctgcgatggcgtgtggtaggcatcattgtcggt 706
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>ref|NM_077264.1| Caenorhabditis elegans C17G1.2 (C17G1.2) mRNA, complete cds
          Length = 843

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 498 tgcatgcagtgttctgcttct 518
           |||||||||||||||||||||
Sbjct: 576 tgcatgcagtgttctgcttct 596
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>gb|AC155948.12| Mus musculus 6 BAC RP24-98H19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 176892

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   gaactgcagagggcagaaaag 230
             |||||||||||||||||||||
Sbjct: 53716 gaactgcagagggcagaaaag 53696
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>emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, complete sequence
          Length = 37990

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 498  tgcatgcagtgttctgcttct 518
            |||||||||||||||||||||
Sbjct: 3670 tgcatgcagtgttctgcttct 3690
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>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence
          Length = 213513

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 217    agagggcagaaaagccagtaaacattag 244
              ||||||| ||||||||||||| ||||||
Sbjct: 158509 agagggctgaaaagccagtaatcattag 158482
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>gb|AC147566.2| Mus musculus BAC clone RP23-106L10 from chromosome 14, complete
           sequence
          Length = 174050

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 aaatgatgaaattcaacaat 309
           ||||||||||||||||||||
Sbjct: 26  aaatgatgaaattcaacaat 7
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>gb|AC153360.6| Mus musculus BAC clone RP23-321I6 from chromosome 10, complete sequence
          Length = 233014

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    ccagtaaacattagaaacct 250
              ||||||||||||||||||||
Sbjct: 158896 ccagtaaacattagaaacct 158915
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>emb|AL135933.11| Human DNA sequence from clone RP4-774E4 on chromosome 11p13-14.2
             Contains a pseudogene similar to ribosomal protein L7a,
             STSs and GSSs, complete sequence
          Length = 111135

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tgggaaacagctggaaatgc 103
             ||||||||||||||||||||
Sbjct: 56189 tgggaaacagctggaaatgc 56170
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>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
             Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   cacttgcaaaaatgatgaaa 300
             ||||||||||||||||||||
Sbjct: 63051 cacttgcaaaaatgatgaaa 63070
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>gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, complete sequence
          Length = 145993

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    agcaagcatgggaaacagctggaa 99
             |||||| |||||||||||||||||
Sbjct: 65659 agcaaggatgggaaacagctggaa 65682
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     aaaaatgatgaaattcaaca 307
               ||||||||||||||||||||
Sbjct: 2370532 aaaaatgatgaaattcaaca 2370513
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    gccgtttgattttgatggtg 159
              ||||||||||||||||||||
Sbjct: 137955 gccgtttgattttgatggtg 137936
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>gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, complete sequence
          Length = 160250

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    aaaaatgatgaaattcaaca 307
              ||||||||||||||||||||
Sbjct: 116558 aaaaatgatgaaattcaaca 116577
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>gb|AC068388.7| Homo sapiens chromosome 3, clone RP11-296M9, complete sequence
          Length = 148372

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tgggaaacagctggaaatgc 103
             ||||||||||||||||||||
Sbjct: 83900 tgggaaacagctggaaatgc 83881
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>gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence
          Length = 162336

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    agcaagcatgggaaacagctggaa 99
             |||||| |||||||||||||||||
Sbjct: 73289 agcaaggatgggaaacagctggaa 73312
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>gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, complete sequence
          Length = 160454

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  aaaaatgatgaaattcaaca 307
            ||||||||||||||||||||
Sbjct: 4515 aaaaatgatgaaattcaaca 4534
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>ref|XM_628533.1| Cryptosporidium parvum Iowa II RNA polymerase beta subunit
           (cgd7_3720), partial mRNA
          Length = 3534

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 aaaaatgatgaaattcaaca 307
           ||||||||||||||||||||
Sbjct: 34  aaaaatgatgaaattcaaca 53
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>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19,
              complete sequence
          Length = 190702

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ttatagggttgttttagagg 456
              ||||||||||||||||||||
Sbjct: 118838 ttatagggttgttttagagg 118857
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>gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, complete sequence
          Length = 161969

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   gttgttttagaggcagaacc 463
             ||||||||||||||||||||
Sbjct: 29115 gttgttttagaggcagaacc 29134
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>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence
          Length = 210509

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   gttgttttagaggcagaacc 463
             ||||||||||||||||||||
Sbjct: 56789 gttgttttagaggcagaacc 56770
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>gb|AC147641.3| Mus musculus BAC clone RP23-43L22 from 14, complete sequence
          Length = 247999

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    aaatgatgaaattcaacaat 309
              ||||||||||||||||||||
Sbjct: 118264 aaatgatgaaattcaacaat 118245
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>emb|AL626776.15| Mouse DNA sequence from clone RP23-73N17 on chromosome 4, complete
             sequence
          Length = 144486

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 498   tgcatgcagtgttctgcttctttc 521
             ||||||||||| ||||||||||||
Sbjct: 12021 tgcatgcagtgatctgcttctttc 12044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,232,389
Number of Sequences: 3902068
Number of extensions: 5232389
Number of successful extensions: 98374
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98234
Number of HSP's gapped (non-prelim): 140
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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