ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baale22 |
|---|---|
| Clone Library Name | barley_pub |
>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)| Length = 1258 Score = 33.5 bits (75), Expect = 0.48 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 8/84 (9%) Frame = +3 Query: 117 EPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHG----- 281 +PG ++P G +G G + L P T H G R Q ++ GH Sbjct: 1020 QPGFMEPQTGPMGVATAGFGLVQPRPPLEPSPTGRHRGVRAVQQQLAYARATGHAMAAMP 1079 Query: 282 ---ESAEEAQGGPRRNLDAHPVLP 344 E+AE G N+ + P P Sbjct: 1080 SSQETAEAVPKGAMGNMGSVPPQP 1103
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/77 (32%), Positives = 29/77 (37%) Frame = +3 Query: 105 DRPVEPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGE 284 +RP G P G R G G Q G R GQR Q G+R+G G Sbjct: 215 ERPAPRPGGGPRPGGGPRPGGGPRPQGQGRP-GGQRDGQRDGQRDGQGNRG-GQRQGAGA 272 Query: 285 SAEEAQGGPRRNLDAHP 335 QGGPR + P Sbjct: 273 GGPRPQGGPRPQGGSRP 289
>UVRA_RICPR (Q9ZCC3) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 953 Score = 32.3 bits (72), Expect = 1.1 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +3 Query: 69 LVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAE-----QEEVLGPGRTRTHSGQ 233 +VEH E E D ++ G P G + +G AE +E + G R SG+ Sbjct: 555 VVEHDEETMYEADHIIDIG---PGAGIHGGRVIAEGNAEKIKHFEESITG----RYLSGR 607 Query: 234 RTAQLRIPCGERRGHGESAEEAQGGPRRNLD 326 +T +++P R GH A E G NLD Sbjct: 608 QT--IKVPSETRVGHDNRAIELLGAVSNNLD 636
>MSPD1_RAT (Q5RJS6) Motile sperm domain-containing protein 1| Length = 213 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 169 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQ 345 + + Q+++K L R +A +LPS K++ E +R+KE L E++ QSCQ Sbjct: 98 QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148
>MSPD1_MOUSE (Q8VEL0) Motile sperm domain-containing protein 1| Length = 213 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 169 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQ 345 + + Q+++K L R +A +LPS K++ E +R+KE L E++ QSCQ Sbjct: 98 QVSEQSQRKALG---RKEVIATLLPS-----AKEQQKEEEEKRIKEHLTESVFFEQSCQ 148
>HSP71_PICAN (P53421) Heat-shock protein 70 1 (HSP72)| Length = 644 Score = 30.8 bits (68), Expect = 3.1 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Frame = +1 Query: 175 ARQNKKKCLDLAERARTLA-NVLPSYGYPAVKDEDTERVLRR---------LKEALDETL 324 A K K D E AR A N L SY Y ++K +E+ L +A++ET+ Sbjct: 519 AEAEKYKEEDEKEAARIAAKNGLESYAY-SLKQTASEKQFEEKVDASKRESLNKAIEETI 577 Query: 325 TLIQSCQTVSICSRNRKAAELDGVNGKINDCIRDL 429 + + + Q+ + K EL+G+ ND ++DL Sbjct: 578 SWLDNNQSATTDEYEDKRKELEGI---ANDALKDL 609
>SYW_LACLA (Q9CJD1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 341 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 24 LPLGGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVLG 203 +P+G + R + S + D VEP G+ P + AA R DG A+ + LG Sbjct: 149 VPVGNDQKPMIEQTREIVRSFNNAYHTDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLG 208 Query: 204 PG 209 G Sbjct: 209 NG 210
>TONB_NEIMC (P95374) Protein tonB| Length = 278 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +3 Query: 135 PNDGAADRKGSGDGTAEQEEVLGP--GRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGG 308 P++ A+ + A+ E+ G G R +G+ A + + G + HGE A ++G Sbjct: 137 PSEKPAEHPSNASAKADSEQGNGEETGTKRDGTGRGEAAVNVSVGVKGEHGEGAGSSKGN 196 Query: 309 PRR 317 P R Sbjct: 197 PLR 199
>SORC3_HUMAN (Q9UPU3) VPS10 domain-containing receptor SorCS3 precursor| Length = 1222 Score = 30.4 bits (67), Expect = 4.1 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = +3 Query: 201 GPGRTRTHSGQRTAQLRI------PCGERRGHGESAEEAQGGPRRNLDAHP 335 GP G R ++++ P GERRG G A GG RR+ A P Sbjct: 86 GPELLPQQGGGRGGEMQVEAGGTSPAGERRGRGIPAPAKLGGARRSRRAQP 136
>IRK14_HUMAN (Q9UNX9) ATP-sensitive inward rectifier potassium channel 14| (Potassium channel, inwardly rectifying subfamily J member 14) (Inward rectifier K(+) channel Kir2.4) (IRK4) Length = 436 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/44 (45%), Positives = 23/44 (52%) Frame = +3 Query: 144 GAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRG 275 GA D SGD A EE GPG R +G A ++ P G RRG Sbjct: 12 GALD---SGDSRAGDEEEAGPGLCR--NGWAPAPVQSPVGRRRG 50
>HSLU_BRUSU (Q8FY12) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 434 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +3 Query: 45 ATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVLGP---GRT 215 AT S R+ + + E+D E + V G PN G+ G ++LG GRT Sbjct: 143 ATRDSFRKKLRNGEMDDKEIEIEVSDSGASPNFEIPGMPGANIGVLNISDMLGKAMGGRT 202 Query: 216 RT 221 +T Sbjct: 203 KT 204
>COT1_HUMAN (P10589) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)| (V-ERBA-related protein EAR-3) Length = 423 Score = 30.4 bits (67), Expect = 4.1 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +3 Query: 120 PGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEA 299 PGG PN A +G G G EQ++ G G H+ Q Q P G + ++ Sbjct: 20 PGG--PNPAAQAARGGGGGAGEQQQQAGSG--APHTPQTPGQPGAPATP----GTAGDKG 71 Query: 300 QGGP 311 QG P Sbjct: 72 QGPP 75
>POLK_MOUSE (Q9QUG2) DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)| Length = 852 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +1 Query: 250 GYPAVKDEDTERVLRRLKEALDETLTLIQSCQTV--SICSRNRKAAELDGVNGKINDCIR 423 G A++ + + L++L E+ ET CQT +C R ++ L+ N +++C+ Sbjct: 588 GQQALQILEPSQALKKLSESF-ETSENSNDCQTFICPVCFREQEGVSLEAFNEHVDECLD 646 Query: 424 DLNFIRNARTNQVAAASS 477 + N++ + + ASS Sbjct: 647 GPSTSENSKISCYSHASS 664
>SRCA_RABIT (P13666) Sarcalumenin precursor| Length = 908 Score = 30.4 bits (67), Expect = 4.1 Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 6/139 (4%) Frame = +3 Query: 33 GGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVLGPGR 212 G A A + +HSE + +E DRP P G P R+ G + +EE G Sbjct: 319 GPAAAEAGTEPGGTKHSEEEGMEQDRP--PEGQVP----VMRQDEGGEASSEEEGDEEGG 372 Query: 213 TRTHSGQRTAQLRIPCGERRGHGESAEEA-----QGGPRRNLDAHPVLPDCKYMLP*PEG 377 + G + + GE G G S+EEA + L P + + P G Sbjct: 373 SEEEEGDPSEE---DSGEDSGDGASSEEAGAASEEASGTAGLGEEETQPSTEGLDSGPAG 429 Query: 378 XXXXXXXXKD-QRLHQGPQ 431 ++ + HQGP+ Sbjct: 430 SQAQDTEAEEPEEGHQGPE 448
>UVRA_RICCN (Q92G31) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 955 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = +3 Query: 69 LVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRT-RTHSGQRTAQ 245 +VEH E E D ++ G P G + +G E+ + T R SG++T Sbjct: 557 VVEHDEETIYEADHIIDIG---PGAGIHGGRVIAEGNVEEIKNFEESITGRYLSGRQT-- 611 Query: 246 LRIPCGERRGHGESAEEAQGGPRRNLD 326 +++P R GH A E G NLD Sbjct: 612 IKVPSETRVGHDNRAIELLGAVSNNLD 638
>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1| Length = 726 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Frame = +1 Query: 109 DPLSLVGLILTMVQLIAKEAETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERV 288 + LSL+ + + L+ + KK C L ++ +L N L G ED E + Sbjct: 200 EQLSLINQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENSLSKAG------EDKEAL 253 Query: 289 LRRLKEALDETLTLIQSCQTVSI-------------CSRNRKAAELDGVNGKINDCIRDL 429 +L+E LD L +S+ S +K AEL +N RDL Sbjct: 254 ETKLREKLDLVEGLQDRINLLSLELKDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDL 313
>CCD46_HUMAN (Q8N8E3) Coiled-coil domain-containing protein 46| Length = 955 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/75 (24%), Positives = 33/75 (44%) Frame = +1 Query: 268 DEDTERVLRRLKEALDETLTLIQSCQTVSICSRNRKAAELDGVNGKINDCIRDLNFIRNA 447 D D +++L R ++E TL +S Q + + + K+ IRD IR Sbjct: 280 DADVQKILERKNNEIEELKTLYRSKQ-------HETEETIRKLEKKVQTLIRDCQVIRET 332 Query: 448 RTNQVAAASSVPAQT 492 + +Q+A + Q+ Sbjct: 333 KEDQIAELKKICEQS 347
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 30.0 bits (66), Expect = 5.3 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = +3 Query: 135 PNDGAADRKGS---GDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQG 305 P GA R G+ G+ + +G R R+ GQR+ R GER ++ ++G Sbjct: 199 PRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSRSGQGERMPRPGGSQGSRG 258 Query: 306 G---PRRN 320 G PR N Sbjct: 259 GSGMPRPN 266
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +3 Query: 111 PVEPGGLDPNDGAADRKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESA 290 P P G D G+ G+ E+ E PG + + Q ++ P GER GES Sbjct: 1187 PAGPNGADGPQGSPGGVGNLGPPGEKGE---PGESGSPGVQGEPGVKGPRGERGEKGESG 1243 Query: 291 EEAQGGP 311 + + GP Sbjct: 1244 QAGEAGP 1250
>PUR1_PYRHO (O57979) Amidophosphoribosyltransferase precursor (EC 2.4.2.14)| (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) Length = 449 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +3 Query: 222 HSGQRTAQLRIPCGERR---GHGESAEEAQGGPRRNLDAHPVLPDCKY 356 H GQ A + + G+ R GHG +E +GG R L+ +PV+ +Y Sbjct: 33 HRGQEGAGISVWDGDIRTVKGHGLVSEVFKGGSIRRLNGNPVIGHVRY 80
>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1054 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 27/56 (48%) Frame = +3 Query: 195 VLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGGPRRNLDAHPVLPDCKYML 362 + G TRT++ TA++R+ G+R GE+ E P+ + L Y++ Sbjct: 928 IQGETDTRTYTLPMTARMRVGEGDRIHRGETLNEGSADPKEIIQVRDTLATENYIV 983
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = +3 Query: 156 RKGSGDGTAEQEEVLGPGRTRTHSGQRTAQLRIPCGERRGHGESAEEAQGG 308 RK + G +++ G +G++ A+L GE+ G G+S + +GG Sbjct: 196 RKATDQGQVKRKMFFGGDSDEEDAGRKPAKLLKKLGEKEGSGKSEGKGRGG 246
>MURG_NEIG1 (Q5F6L8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 127 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 231 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGSLNREKCLKWAENARTLA 338
>MORC3_HUMAN (Q14149) MORC family CW-type zinc finger 3 (Zinc finger CW-type| coiled-coil domain protein 3) Length = 939 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = +1 Query: 265 KDEDTERVLRRLKEALDETLTLIQSCQTV-------SICSRNRKAAELDGVNGKINDCIR 423 K E + ++ + ++AL+E L + C + S CS N +E+D + +++D R Sbjct: 762 KSESPDHMVSQYQQALEEIERLKKQCSALQHVKAECSQCSNNESKSEMDEMAVQLDDVFR 821 Query: 424 DLN 432 L+ Sbjct: 822 QLD 824
>SYW_STRP8 (P67598) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 340 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +3 Query: 21 LLPLGGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVL 200 L+P+G + R + S D VEP G+ P + A R DG A+ + L Sbjct: 148 LVPVGNDQKPMIEQTREIVRSFNHTYHTDCLVEPEGIYPENEKAGRLPGLDGNAKMSKSL 207 Query: 201 GPG 209 G G Sbjct: 208 GNG 210
>SYW_STRP6 (Q5X9A2) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 340 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +3 Query: 21 LLPLGGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVL 200 L+P+G + R + S D VEP G+ P + A R DG A+ + L Sbjct: 148 LVPVGNDQKPMIEQTREIVRSFNHTYHTDCLVEPEGIYPENEKAGRLPGLDGNAKMSKSL 207 Query: 201 GPG 209 G G Sbjct: 208 GNG 210
>SYW_STRP3 (P67597) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 340 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +3 Query: 21 LLPLGGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVL 200 L+P+G + R + S D VEP G+ P + A R DG A+ + L Sbjct: 148 LVPVGNDQKPMIEQTREIVRSFNHTYHTDCLVEPEGIYPENEKAGRLPGLDGNAKMSKSL 207 Query: 201 GPG 209 G G Sbjct: 208 GNG 210
>SYW_STRP1 (Q99XH4) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 340 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +3 Query: 21 LLPLGGGEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEEVL 200 L+P+G + R + S D VEP G+ P + A R DG A+ + L Sbjct: 148 LVPVGNDQKPMIEQTREIVRSFNHTYHTDCLVEPEGIYPENEKAGRLPGLDGNAKMSKSL 207 Query: 201 GPG 209 G G Sbjct: 208 GNG 210
>VE2_HPV08 (P06422) Regulatory protein E2| Length = 498 Score = 24.6 bits (52), Expect(2) = 8.8 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +1 Query: 259 AVKDEDTERVLRRLKEALDETLTLIQSCQTVSICSRNRKAAELDGV 396 +V + T R+ R L EA+D + L++ C RNR G+ Sbjct: 396 SVSAKHTGRLGRLLDEAIDPPVILVRGEANTLKCFRNRARVRYRGL 441 Score = 23.1 bits (48), Expect(2) = 8.8 Identities = 15/52 (28%), Positives = 19/52 (36%) Frame = +3 Query: 39 GEATAQSHRRLVEHSELDRLEXDRPVEPGGLDPNDGAADRKGSGDGTAEQEE 194 G ATA S RR S R R + R+G G G+ + E Sbjct: 311 GRATATSRRRAGRGSPRRRRSTSRSPSTNTFKRSQRGGGRRGRGRGSRGRRE 362
>BCN1_MOUSE (O88597) Beclin-1 (Coiled-coil myosin-like BCL2-interacting| protein) Length = 448 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +1 Query: 169 ETARQNKKKCLDLAERARTLANVLPSYGYPAVKDEDTERVLRRLKEALDETLTLIQSCQT 348 E QN K+CL++ E+ + ++D+E++ R LKE E LIQ + Sbjct: 154 ENECQNYKRCLEILEQ---------------MNEDDSEQLQRELKELALEEERLIQELED 198 Query: 349 VSICSRNRK 375 V +NRK Sbjct: 199 V---EKNRK 204
>MURG_NEIMB (Q9K0Y2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.3 bits (64), Expect = 9.1 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 127 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 231 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338
>MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 355 Score = 29.3 bits (64), Expect = 9.1 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 127 GLILTMVQLIAKEAET--ARQNKKKCLDLAERARTLA 231 GL+L QL A++ N++KCL AE ARTLA Sbjct: 302 GLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLA 338
>TYSY_PSEAE (Q9I6F1) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.3 bits (64), Expect = 9.1 Identities = 15/48 (31%), Positives = 28/48 (58%) Frame = -1 Query: 476 ELAAAT*FVRAFLMKLRSLMQSLIFPLTPSNSAAFRLREHILTVWQDW 333 +LAA V L+S++ L++ L S + A+ L+EH +++W +W Sbjct: 37 DLAAGFPLVTTKKCHLKSIVHELLWFLKGSTNIAY-LKEHGVSIWDEW 83
>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1790 Score = 29.3 bits (64), Expect = 9.1 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 8/75 (10%) Frame = +1 Query: 154 IAKEAETARQNKKKCLDLAERARTLANVLPSYGYPAVKD--EDTERVLR------RLKEA 309 +AK+AETA +KK D RA T A + S Y K E +ER L +L E Sbjct: 1447 VAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNANIKLAEN 1506 Query: 310 LDETLTLIQSCQTVS 354 L L Q +T S Sbjct: 1507 LFIALNNFQENKTAS 1521 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,047,931 Number of Sequences: 219361 Number of extensions: 1228390 Number of successful extensions: 4884 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4723 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4877 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
