No.
Definition
Score (bits)
E Value
1 CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...
243
3e-64
2 CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...
124
2e-32
3 CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...
124
3e-32
4 CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...
123
3e-32
5 CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...
123
4e-32
6 CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...
123
4e-32
7 CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...
123
6e-32
8 CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...
122
6e-32
9 CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...
122
6e-32
10 CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...
122
6e-32
11 CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...
122
8e-32
12 CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...
122
8e-32
13 CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...
122
1e-31
14 CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...
121
1e-31
15 CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...
122
1e-31
16 CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...
122
1e-31
17 CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...
122
1e-31
18 CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...
122
1e-31
19 CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...
122
1e-31
20 CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...
121
1e-31
21 CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...
121
1e-31
22 CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...
122
1e-31
23 CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...
121
2e-31
24 CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...
121
2e-31
25 CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...
121
2e-31
26 CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...
121
2e-31
27 CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...
121
2e-31
28 CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...
121
2e-31
29 CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...
121
2e-31
30 CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...
121
2e-31
31 CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...
120
3e-31
32 CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...
120
3e-31
33 CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...
120
3e-31
34 CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...
120
3e-31
35 CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...
120
4e-31
36 CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...
119
5e-31
37 CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...
119
6e-31
38 CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...
119
6e-31
39 CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...
121
6e-31
40 CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...
118
1e-30
41 CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...
118
1e-30
42 CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...
119
2e-30
43 CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...
117
2e-30
44 CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...
117
2e-30
45 CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...
117
2e-30
46 CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...
118
3e-30
47 CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...
116
4e-30
48 CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...
120
7e-30
49 CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...
115
9e-30
50 CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...
115
9e-30
51 CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...
114
2e-29
52 CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...
114
2e-29
53 CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...
114
3e-29
54 CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...
107
2e-27
55 CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...
107
2e-27
56 CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe...
117
3e-26
57 CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...
110
1e-25
58 CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...
108
1e-23
59 CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...
108
1e-23
60 CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty...
108
1e-23
61 CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...
107
2e-23
62 CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...
107
2e-23
63 CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 prot...
103
6e-22
64 CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ...
102
1e-21
65 CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...
95
7e-21
66 CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...
84
2e-19
67 CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...
84
9e-18
68 CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...
89
1e-17
69 CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...
82
2e-17
70 CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...
67
2e-14
71 CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29
64
3e-13
72 CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...
73
8e-13
73 LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...
66
1e-10
74 CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...
50
3e-10
75 CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...
64
4e-10
76 CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...
64
4e-10
77 LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...
64
5e-10
78 FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...
47
4e-05
79 FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein ...
44
4e-04
80 FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein ...
44
4e-04
81 FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein ...
43
7e-04
82 L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...
42
0.002
83 FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein ...
41
0.003
84 CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...
39
0.013
85 CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...
39
0.017
86 FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein ...
38
0.022
87 FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein ...
38
0.029
88 CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...
37
0.038
89 FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein ...
37
0.065
90 FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein ...
37
0.065
91 FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein ...
37
0.065
92 FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein ...
37
0.065
93 FCPC_MACPY (Q40299) Fucoxanthin-chlorophyll a-c binding protein ...
36
0.084
94 FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein ...
36
0.11
95 CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fr...
35
0.14
96 FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, ...
35
0.25
97 USE1_HUMAN (Q9NZ43) USE1-like protein (Hematopoietic stem/progen...
30
4.6
98 DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC...
30
7.9
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 269
Score = 124 bits (310), Expect(2) = 2e-32
Identities = 70/137 (51%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L K G G EAVWFK GA + L+Y GN ++ ++ YR+
Sbjct: 121 LAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 179
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D ++PGG FDPLGLA DPD A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+DP NN
Sbjct: 240 GPLENLNDHLADPVANN 256
Score = 35.0 bits (79), Expect(2) = 2e-32
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IHARWAMLGA G + PE
Sbjct: 98 RELEVIHARWAMLGALGCLTPE 119
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
(Allergen Api g 3)
Length = 264
Score = 124 bits (310), Expect(2) = 3e-32
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 123 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG 177
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+++A LKVKE+KNGRLAMFSM GFF+QA VTG+GP
Sbjct: 178 GPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 238 LENLADHLADPVNNN 252
Score = 34.7 bits (78), Expect(2) = 3e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 94 RELEVIHSRWAMLGALGCVFPE 115
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
(LHCII type I CAB-8)
Length = 268
Score = 123 bits (309), Expect(2) = 3e-32
Identities = 69/137 (50%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L++ G G EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 121 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 179
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D L+PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 180 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 239
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HLSDP NN
Sbjct: 240 GPLENLADHLSDPVNNN 256
Score = 34.7 bits (78), Expect(2) = 3e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 98 RELEVIHSRWAMLGALGCVFPE 119
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (CAB-140) (LHCP)
Length = 267
Score = 123 bits (308), Expect(2) = 4e-32
Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRIT- 245
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 179
Query: 246 NGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
NG E +D L+PGG FDPLGLATDP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+G
Sbjct: 180 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 420 PFENLCAHLSDPFGNN 467
P ENL HL+DP NN
Sbjct: 240 PIENLADHLADPVNNN 255
Score = 34.7 bits (78), Expect(2) = 4e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 96 RELEVIHSRWAMLGALGCVFPE 117
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
precursor (LHCII type I CAB-165/180)
Length = 267
Score = 123 bits (308), Expect(2) = 4e-32
Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRIT- 245
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 179
Query: 246 NGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
NG E +D L+PGG FDPLGLATDP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+G
Sbjct: 180 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 420 PFENLCAHLSDPFGNN 467
P ENL HL+DP NN
Sbjct: 240 PIENLADHLADPVNNN 255
Score = 34.7 bits (78), Expect(2) = 4e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 96 RELEVIHSRWAMLGALGCVFPE 117
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
chloroplast precursor (Chlorophyll a-b binding protein
type II 1B) (CAB) (LHCP)
Length = 274
Score = 123 bits (308), Expect(2) = 6e-32
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK GA + L+Y GN ++ ++ YRI
Sbjct: 133 KFG-----EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D ++PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 248 IENLADHLADPVNNN 262
Score = 34.3 bits (77), Expect(2) = 6e-32
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 104 RELEVIHCRWAMLGALGCVFPE 125
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 265
Score = 122 bits (307), Expect(2) = 6e-32
Identities = 70/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
Score = 34.7 bits (78), Expect(2) = 6e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 95 RELEVIHSRWAMLGALGCVFPE 116
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 261
Score = 122 bits (307), Expect(2) = 6e-32
Identities = 70/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 120 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 174
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 175 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 234
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 235 LENLADHLADPVNNN 249
Score = 34.7 bits (78), Expect(2) = 6e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 91 RELEVIHSRWAMLGALGCVFPE 112
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 256
Score = 122 bits (307), Expect(2) = 6e-32
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 115 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG 169
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D ++PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+GP
Sbjct: 170 GPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 229
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 230 LENLADHLADPVNNN 244
Score = 34.7 bits (78), Expect(2) = 6e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 86 RELEVIHSRWAMLGALGCVFPE 107
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
precursor (LHCII type I CAB-AB80) (LHCP)
Length = 269
Score = 122 bits (306), Expect(2) = 8e-32
Identities = 68/137 (49%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L++ G G EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 122 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 180
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D L+PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 181 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+DP NN
Sbjct: 241 GPLENLADHLADPVNNN 257
Score = 34.7 bits (78), Expect(2) = 8e-32
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 99 RELEVIHSRWAMLGALGCVFPE 120
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
(LHCII type I CAB-22R) (LHCP)
Length = 267
Score = 122 bits (307), Expect(2) = 8e-32
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK GA + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 8e-32
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
chloroplast precursor (Chlorophyll a-b binding protein
type II 1A) (CAB) (LHCP)
Length = 278
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK GA + L+Y G+ I+ ++ YR+
Sbjct: 137 KFG-----EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG 191
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D ++PGG FDPLGLA DPD A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 192 GPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 252 IENLADHLADPVNNN 266
Score = 34.7 bits (78), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 108 RELEVIHSRWAMLGALGCVFPE 129
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 264
Score = 121 bits (304), Expect(2) = 1e-31
Identities = 69/137 (50%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK GA + L+Y GN ++ ++ YR+
Sbjct: 117 LSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRV 175
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 176 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 236 GPIENLADHIADPVANN 252
Score = 35.0 bits (79), Expect(2) = 1e-31
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G I PE
Sbjct: 94 RELEVIHSRWAMLGALGCIFPE 115
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 263
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK GA + L+Y GN ++ ++ YR+
Sbjct: 116 LSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E DK++PGG FDPLGLA DPD A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 235 GPIENLFDHVADPVANN 251
Score = 34.7 bits (78), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 93 RELEVIHSRWAMLGALGCVFPE 114
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
(LHCII type I CAB-3C) (LHCP)
Length = 267
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 267
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 266
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 68/136 (50%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 178
Query: 249 GL---EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
E +D L+PGG FDPLGLATDP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+G
Sbjct: 179 EGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 238
Query: 420 PFENLCAHLSDPFGNN 467
P ENL HL+DP NN
Sbjct: 239 PLENLADHLADPVNNN 254
Score = 34.3 bits (77), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
(LHCII type I CAB-1B) (LHCP)
Length = 265
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
Score = 34.3 bits (77), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP) (Fragment)
Length = 255
Score = 121 bits (304), Expect(2) = 1e-31
Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L++ G G EAVWFK G+ + L+Y GN ++ ++ YRI
Sbjct: 108 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 166
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D ++PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 167 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 226
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+DP NN
Sbjct: 227 GPLENLADHLADPVNNN 243
Score = 34.7 bits (78), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 85 RELEVIHSRWAMLGALGCVFPE 106
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 253
Score = 121 bits (303), Expect(2) = 1e-31
Identities = 68/128 (53%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Frame = +3
Query: 102 EAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITNG----LEF 260
E VWFK GA + LNY GN I+ +I YR G L+
Sbjct: 113 EPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDD 172
Query: 261 DDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCA 440
D L+PGGPFDPLGLA DPD A LKVKEIKNGRLAMFS LGFF+QA VTG+GP +NL
Sbjct: 173 LDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTD 232
Query: 441 HLSDPFGN 464
HL+DP N
Sbjct: 233 HLADPTVN 240
Score = 35.0 bits (79), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R + LIHARWA+LGA G + PE
Sbjct: 80 REIELIHARWALLGALGILTPE 101
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
(LHCII type I CAB-5) (LHCP) (Fragment)
Length = 237
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 90 LSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV 148
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E DK++PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 149 GGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 208
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 209 GPIENLSDHIADPVANN 225
Score = 34.3 bits (77), Expect(2) = 1e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 67 RELEVIHCRWAMLGALGCVFPE 88
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
(LHCII type I CAB-91R) (LHCP)
Length = 267
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
(LHCII type I CAB-40) (LHCP)
Length = 267
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
(LHCII type I CAB-25) (LHCP)
Length = 266
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 GPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 240 LENLADHLADPVNNN 254
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RELEVIHCRWAMLGALGCVFPE 117
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
(LHCII type I CAB-16) (LHCP)
Length = 266
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 240 LENLADHLADPVNNN 254
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RELEVIHCRWAMLGALGCVFPE 117
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
(LHCII type I CAB-21) (LHCP)
Length = 265
Score = 121 bits (304), Expect(2) = 2e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 262
Score = 121 bits (303), Expect(2) = 2e-31
Identities = 68/137 (49%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L++ G G EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 115 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 173
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D L+PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 174 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 233
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 234 GPLENLADHIADPVNNN 250
Score = 34.7 bits (78), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 92 RELEVIHSRWAMLGALGCVFPE 113
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
(LHCII type I CAB-37) (LHCP)
Length = 265
Score = 121 bits (303), Expect(2) = 2e-31
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 118 LSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E DK++PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 177 GGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 237 GPIENLYDHVADPVANN 253
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
(LHCII type I CAB-36) (LHCP)
Length = 265
Score = 121 bits (303), Expect(2) = 2e-31
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 118 LSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E DK++PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 177 GGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 237 GPIENLFDHVADPVANN 253
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
(LHCII type II CAB-1A) (LHCP)
Length = 278
Score = 120 bits (301), Expect(2) = 3e-31
Identities = 68/135 (50%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK GA + L+Y G+ I+ ++ YR+
Sbjct: 137 KFG-----EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG 191
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D ++PGG FDPLGLA DPD A +KVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 192 GPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 252 IENLADHLADPVNNN 266
Score = 34.7 bits (78), Expect(2) = 3e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 108 RELEVIHSRWAMLGALGCVFPE 129
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
(LHCII type I CAB-7) (LHCP)
Length = 267
Score = 120 bits (302), Expect(2) = 3e-31
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
+NL HL+DP NN
Sbjct: 241 LDNLVDHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 3e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
(LHCII type I CAB-4) (LHCP)
Length = 265
Score = 120 bits (302), Expect(2) = 3e-31
Identities = 68/137 (49%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 118 LSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E DK++PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 177 GGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL H++DP NN
Sbjct: 237 GPIENLSDHINDPVANN 253
Score = 34.3 bits (77), Expect(2) = 3e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
(LHCII type II CAB-151) (LHCP)
Length = 265
Score = 120 bits (302), Expect(2) = 3e-31
Identities = 70/137 (51%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L+K G G EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 118 LSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D ++PGG FDPLGLA DPD A LKVKEIKNGRLAMFSM GFF+QA VTG+
Sbjct: 177 GGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+DP NN
Sbjct: 237 GPIENLFDHLADPVANN 253
Score = 34.3 bits (77), Expect(2) = 3e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
(LHCII type I CAB-3) (LHCP)
Length = 263
Score = 120 bits (300), Expect(2) = 4e-31
Identities = 67/137 (48%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L++ G G EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 116 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRI 174
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D ++PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 175 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+ P NN
Sbjct: 235 GPLENLADHLAGPVNNN 251
Score = 34.7 bits (78), Expect(2) = 4e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 93 RELEVIHSRWAMLGALGCVFPE 114
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
(LHCII type I CAB-M9) (LHCP)
Length = 265
Score = 119 bits (299), Expect(2) = 5e-31
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG 178
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A +KVKE+KNGRLAMFSM GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
Score = 34.7 bits (78), Expect(2) = 5e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 95 RELEVIHSRWAMLGALGCVFPE 116
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
(LHCII type I CAB-50) (LHCP)
Length = 267
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 67/135 (49%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A LKVK IKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 6e-31
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
chloroplast precursor (DE Chlorophyll a-b binding
protein type I F3) (CAB-F3) (LHCP)
Length = 265
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L K G G EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 118 LAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E +D ++PGG FDPLGLA DP+ A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 177 AGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP ENL HL+DP NN
Sbjct: 237 GPIENLSDHLADPAVNN 253
Score = 34.3 bits (77), Expect(2) = 6e-31
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 95 RELEVIHSRWAMLGALGCVTPE 116
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
(LHCII type I CAB-E) (LHCP)
Length = 266
Score = 118 bits (296), Expect(2) = 1e-30
Identities = 67/135 (49%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 EPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 240 LENLADHLADPVNNN 254
Score = 34.3 bits (77), Expect(2) = 1e-30
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RELEVIHCRWAMLGALGCVFPE 117
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
precursor (CAB) (LHCP)
Length = 266
Score = 118 bits (296), Expect(2) = 1e-30
Identities = 70/135 (51%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK GA + L+Y GN I+ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 GTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 240 IENLYDHLADPVANN 254
Score = 34.3 bits (77), Expect(2) = 1e-30
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RELEVIHCRWAMLGALGCVFPE 117
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
(LHCII type I CAB-13) (LHCP)
Length = 266
Score = 119 bits (299), Expect(2) = 2e-30
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 125 KFG-----EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ A L+VKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 GPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 240 LENLADHLADPVNNN 254
Score = 32.7 bits (73), Expect(2) = 2e-30
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RW MLGA G + PE
Sbjct: 96 RKLEVIHCRWTMLGALGCVFPE 117
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
(LHCII type I CAB-C) (LHCP)
Length = 267
Score = 117 bits (294), Expect(2) = 2e-30
Identities = 67/135 (49%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 181 EPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 241 LENLADHLADPVNNN 255
Score = 34.3 bits (77), Expect(2) = 2e-30
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 264
Score = 117 bits (294), Expect(2) = 2e-30
Identities = 67/135 (49%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L Y GN ++ ++ YR+
Sbjct: 123 KFG-----EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 177
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA D + A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 178 GPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 238 LENLADHLADPVNNN 252
Score = 34.3 bits (77), Expect(2) = 2e-30
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 94 RELEVIHGRWAMLGALGCVFPE 115
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP) (Fragment)
Length = 245
Score = 117 bits (293), Expect(2) = 2e-30
Identities = 66/135 (48%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EA WFK G+ + L+Y GN I+ ++ YRI
Sbjct: 104 KFG-----EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG 158
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D ++PGG FDPL LA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 159 GPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 218
Query: 423 FENLCAHLSDPFGNN 467
ENL HL++P NN
Sbjct: 219 LENLADHLAEPVNNN 233
Score = 34.7 bits (78), Expect(2) = 2e-30
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G + PE
Sbjct: 75 RELEVIHSRWAMLGALGCVFPE 96
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
(LHCII type II CAB-215) (LHCP)
Length = 265
Score = 118 bits (296), Expect(2) = 3e-30
Identities = 68/137 (49%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L K G G EAVWFK G+ + L+Y GN I+ ++ YR+
Sbjct: 118 LEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRV 176
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G E D L+PGG FDPLGLA DPD A LKVKE+KNGRLAMFSM GFF+QA VTG+
Sbjct: 177 GGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 417 GPFENLCAHLSDPFGNN 467
GP +NL H++DP NN
Sbjct: 237 GPIQNLYDHVADPVANN 253
Score = 33.1 bits (74), Expect(2) = 3e-30
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+RWAMLGA G PE
Sbjct: 95 RELEVIHSRWAMLGALGCTFPE 116
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 273
Score = 120 bits (302), Expect(2) = 7e-30
Identities = 66/133 (49%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Frame = +3
Query: 84 GANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLIXXXXXXXXXXXXXXYYRITNGL 254
G G A+WFK GA + LNY GN I N++ YR+ G
Sbjct: 130 GIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGP 189
Query: 255 EFD--DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFE 428
+ D L+PG FDPLGLA DPD A LKVKEIKNGRLAMF+ LGFF+QA VTG+GP E
Sbjct: 190 AGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIE 249
Query: 429 NLCAHLSDPFGNN 467
NL HL++P NN
Sbjct: 250 NLTDHLANPAENN 262
Score = 29.6 bits (65), Expect(2) = 7e-30
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L LIHAR +LGA G + PE
Sbjct: 102 RELELIHARCGLLGALGMVTPE 123
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 256
Score = 115 bits (287), Expect(2) = 9e-30
Identities = 66/135 (48%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLIXXXXXXXXXXXXXXYYRITN 248
KFG E VWFK GA + L+Y G+ I N++ YR+
Sbjct: 115 KFG-----EPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG 169
Query: 249 GLEFD--DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G + D L+PG FDPLGLA DPD A LKVKEIKNGRLAMFS GFF+QA VTG+GP
Sbjct: 170 GPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGP 229
Query: 423 FENLCAHLSDPFGNN 467
+NL HL+DP NN
Sbjct: 230 IQNLADHLADPGTNN 244
Score = 35.0 bits (79), Expect(2) = 9e-30
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPERSTSLA 87
R L +IHARWA+LGA G + PE ++ A
Sbjct: 85 RELEVIHARWALLGALGILTPELLSTYA 112
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 253
Score = 115 bits (289), Expect(2) = 9e-30
Identities = 67/137 (48%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLIXXXXXXXXXXXXXXYYRI 242
L K G G EAVWFK GA + L+Y GN + N++ YR+
Sbjct: 106 LAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRV 164
Query: 243 TNGLEFD--DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
G + D L+PG FDPLGLA DPD A LKVKEIKNGRLA FSM GFF+QA VTG+
Sbjct: 165 NGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGK 224
Query: 417 GPFENLCAHLSDPFGNN 467
GP +NL HL++P NN
Sbjct: 225 GPVQNLDDHLANPTVNN 241
Score = 34.3 bits (77), Expect(2) = 9e-30
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L LIHARWAMLGA G PE
Sbjct: 83 RELELIHARWAMLGALGCQTPE 104
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 265
Score = 114 bits (286), Expect(2) = 2e-29
Identities = 65/135 (48%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVWFK G+ + L+Y GN I+ ++ YRI
Sbjct: 124 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA DP+ LKVKE+K GRLAM SM GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGP 238
Query: 423 FENLCAHLSDPFGNN 467
ENL H++DP NN
Sbjct: 239 LENLADHIADPVNNN 253
Score = 34.3 bits (77), Expect(2) = 2e-29
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 95 RELEVIHCRWAMLGALGCVFPE 116
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 266
Score = 114 bits (285), Expect(2) = 2e-29
Identities = 66/135 (48%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EA WFK G+ + L+Y GN ++ L+ YRI
Sbjct: 125 KFG-----EAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG 179
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+PGG FDPLGLA P A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 423 FENLCAHLSDPFGNN 467
E+L H++DP NN
Sbjct: 240 LEDLADHIADPVNNN 254
Score = 34.3 bits (77), Expect(2) = 2e-29
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RELEVIHCRWAMLGALGCVFPE 117
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
(LHCII type I CAB-22L) (LHCP)
Length = 267
Score = 114 bits (284), Expect(2) = 3e-29
Identities = 66/135 (48%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG EAVW K G+ + L+Y GN ++ ++ YR+
Sbjct: 126 KFG-----EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG 180
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G D L+PGG FDPLGLA DP+ A LKVKE KNGRLAMFSM GFFIQA VTG+GP
Sbjct: 181 GPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGP 240
Query: 423 FENLCAHLSDPFGNN 467
ENL HL DP NN
Sbjct: 241 LENLADHLVDPVNNN 255
Score = 34.3 bits (77), Expect(2) = 3e-29
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 97 RELEVIHCRWAMLGALGCVFPE 118
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
chloroplast precursor (CAB)
Length = 268
Score = 107 bits (268), Expect(2) = 2e-27
Identities = 62/131 (47%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +3
Query: 102 EAVWFKTGALLLDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFD------ 263
E VWFK G+ + L+Y GN NL+ + G +
Sbjct: 129 EPVWFKAGSQIFSEGGLDYLGNP---NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVG 185
Query: 264 --DKLHPGGP-FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENL 434
+ L+PGG FDPLGLA DP A LKVKEIKNGRLAMFSM GFF+QA VTG+GP ENL
Sbjct: 186 EGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
Query: 435 CAHLSDPFGNN 467
HL DP NN
Sbjct: 246 FDHLDDPVANN 256
Score = 34.3 bits (77), Expect(2) = 2e-27
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 96 RALEVIHGRWAMLGALGCVFPE 117
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
(LHCII type III CAB-13)
Length = 265
Score = 107 bits (267), Expect(2) = 2e-27
Identities = 61/131 (46%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +3
Query: 102 EAVWFKTGALLLDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFD------ 263
E VWFK G+ + L+Y GN NL+ + G +
Sbjct: 126 EPVWFKAGSQIFSDGGLDYLGNP---NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVG 182
Query: 264 --DKLHPGGP-FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENL 434
+ L+PGG FDPLGLA DP A LKVKEIKNGRLAMFSM GFF+QA VTG+GP ENL
Sbjct: 183 EGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
Query: 435 CAHLSDPFGNN 467
HL +P NN
Sbjct: 243 LDHLDNPVANN 253
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G I PE
Sbjct: 93 RALEVIHGRWAMLGALGCIFPE 114
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
(LHCII type I CAB-48) (LHCP)
Length = 264
Score = 110 bits (275), Expect(2) = 1e-25
Identities = 63/135 (46%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 KFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITN 248
KFG E VWFK G+ + L++ GN ++ ++ Y +
Sbjct: 123 KFG-----EGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG 177
Query: 249 GL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
G E D L+ GG FDPLGL DP++ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP
Sbjct: 178 GRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 423 FENLCAHLSDPFGNN 467
ENL HL+DP NN
Sbjct: 238 IENLADHLTDPVNNN 252
Score = 25.8 bits (55), Expect(2) = 1e-25
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWA+ G + PE
Sbjct: 94 RELEVIHCRWAIAVGLGCVFPE 115
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
precursor (LHCII type I CAB-AB10) (LHCP)
Length = 268
Score = 94.7 bits (234), Expect(2) = 7e-21
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +3
Query: 102 EAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRITNGL--EFDD 266
EAVWFK GA + L+Y GN ++ ++ YRI G E D
Sbjct: 131 EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTD 190
Query: 267 KLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHL 446
L+PG FD LGLA D + A LKVKE+KNGRLAMFSM GFF+QA V+ + ENL HL
Sbjct: 191 PLYPGS-FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHL 249
Query: 447 SDPFGNNLLTVIS 485
NN L+ ++
Sbjct: 250 GWTVNNNALSNVT 262
Score = 25.4 bits (54), Expect(2) = 7e-21
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH+R AM A G I PE
Sbjct: 99 RELEVIHSRCAMSAALGCIFPE 120
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
(LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
protein)
Length = 246
Score = 84.3 bits (207), Expect(2) = 2e-19
Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +3
Query: 135 LDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFDDKLHPGGPFDPLGLATD 314
+ G Y G +P + ++ + + + K +PGG FDPLG + D
Sbjct: 122 IPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKD 181
Query: 315 PDQAALLKVKEIKNGRLAMFSMLGFFIQ--AYVTGEGPFENLCAHLSDPFGNNLLTVI 482
P + LKVKEIKNGRLA+ +++GF +Q AY+ G GP ENL HL+DP+ NN+ VI
Sbjct: 182 PAKFEELKVKEIKNGRLALLAIVGFCVQQSAYL-GTGPLENLATHLADPWHNNIGDVI 238
Score = 31.2 bits (69), Expect(2) = 2e-19
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 16 LIHARWAMLGAAGFIIPE 69
LIH RWAML G I+PE
Sbjct: 89 LIHCRWAMLAVPGIIVPE 106
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
precursor (LHCII protein 4.1) (LHCB4.1)
Length = 290
Score = 84.3 bits (207), Expect(2) = 9e-18
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 111 WFKTGAL-LLDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFDDKLHPGGP 287
W G + L+DG++ Y G +P ++ + R L+ + +L+PGG
Sbjct: 165 WQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGK 221
Query: 288 F-DPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGN 464
F DPLGLA DP++ A L++ EIK+ RLAM + LGF +QA TG+GP N HLSDP
Sbjct: 222 FFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHT 281
Query: 465 NLLTVISGA 491
++ S +
Sbjct: 282 TIIDTFSSS 290
Score = 25.4 bits (54), Expect(2) = 9e-18
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPERSTSL 84
R LIH RWAML G + E T +
Sbjct: 137 RECELIHGRWAMLATLGALSVEWLTGV 163
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
precursor (LHCII protein 4.2) (LHCB4.2)
Length = 287
Score = 82.0 bits (201), Expect(2) = 2e-17
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +3
Query: 111 WFKTGAL-LLDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFDDKLHPGGP 287
W G + L+DG++ Y G +P ++ + R L+ + +L+PGG
Sbjct: 162 WQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGK 218
Query: 288 F-DPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGN 464
F DPLGLA+DP + A L++ EIK+ RLAM LGF +QA TG+GP N HLSDP
Sbjct: 219 FFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHT 278
Query: 465 NLLTVISGA 491
++ S +
Sbjct: 279 TIIDTFSSS 287
Score = 26.6 bits (57), Expect(2) = 2e-17
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPERSTSL 84
R LIH RWAML G I E T +
Sbjct: 134 RECELIHGRWAMLATLGAITVEWLTGV 160
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
precursor (LHCII protein 4.3) (LHCB4.3)
Length = 276
Score = 66.6 bits (161), Expect(2) = 2e-14
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +3
Query: 111 WFKTGAL-LLDGNTLNYFGNSIPINLIXXXXXXXXXXXXXXYYRITNGLEFDDKLHPGGP 287
W G + L++G++ Y G +P +L + R + L+ + +++PGG
Sbjct: 166 WQDAGKVELVEGSS--YLGQPLPFSLTTLIWIEVLVVGYIEFQR-NSELDPEKRIYPGGY 222
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGP 422
FDPLGLA DP++ LK+ EIK+ RLAM + L F +QA TG+GP
Sbjct: 223 FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGP 267
Score = 31.6 bits (70), Expect(2) = 2e-14
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPERSTSLA 87
R LIH RWAMLG G I E T +A
Sbjct: 138 RECELIHGRWAMLGTLGAIAVEALTGIA 165
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
(LHCI type III CAB-4) (LHCP)
Length = 251
Score = 72.8 bits (177), Expect = 8e-13
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3
Query: 273 HPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSD 452
+PGG F+PL A P Q A K KE+ NGRLAM + LGF +Q VTG+GPFENL HLSD
Sbjct: 185 YPGGIFNPLNFA--PTQEA--KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240
Query: 453 PFGNNLL 473
P+ N ++
Sbjct: 241 PWHNTIV 247
Score = 35.8 bits (81), Expect = 0.11
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
FDPLGLA DP+ E+ NGR AM + G + T G
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
Score = 32.3 bits (72), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 16 LIHARWAMLGAAGFIIPERSTSLARTAAP 102
L++ RWAMLG AG ++PE T + P
Sbjct: 97 LVNGRWAMLGVAGMLLPEVFTKIGIINVP 125
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
[Contains: LH35 protein 1; LH35 protein 2] (Fragment)
Length = 331
Score = 65.9 bits (159), Expect = 1e-10
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +3
Query: 231 YYRITNGLEFD----DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQ 398
Y+R G +D D+ +PG FDPL L TD + +EIKNGRLAM +LG Q
Sbjct: 251 YWRGNGGFNWDKGTADRSYPG--FDPLKLTTDYTK------REIKNGRLAMTGLLGLTFQ 302
Query: 399 AYVTGEGPFENLCAHLSDPFGNNLLTVIS 485
TGE P NL AH ++P G N+ T ++
Sbjct: 303 YLATGESPLANLAAHFANPVGANITTTLA 331
Score = 60.1 bits (144), Expect = 5e-09
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +3
Query: 231 YYRITNGLEFD-----DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFI 395
Y+R G +D D+ +PG FDP L T+ +AA EIKNGRLAM M G +
Sbjct: 61 YWRGNGGFGWDGEEKYDRSYPG--FDPCNLTTEYTKAA-----EIKNGRLAMIGMFGLEV 113
Query: 396 QAYVTGEGPFENLCAHLSDPFGNNL 470
Q +VT +GP NL HL P N+
Sbjct: 114 QNHVTAQGPVANLIEHLRHPLAANI 138
Score = 34.3 bits (77), Expect = 0.32
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFI 395
FDPL +A DP A ++V E+ + RL+M +++G +
Sbjct: 182 FDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIV 217
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP) (Fragment)
Length = 205
Score = 50.1 bits (118), Expect(2) = 3e-10
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 72 LNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIXXXXXXXXXXXXXXYYRI 242
L K G G EAVWFK G+ + L+Y GN ++ ++ YR+
Sbjct: 117 LAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRV 175
Query: 243 TNGL--EFDDKLHPGGPFDPLGLATDPD 320
G E D+L+PGG FDPLGLA DP+
Sbjct: 176 GGGPLGEGLDQLYPGGAFDPLGLAEDPE 203
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 4 RPLXLIHARWAMLGAAGFIIPE 69
R L +IH RWAMLGA G + PE
Sbjct: 94 RELEVIHCRWAMLGALGCVFPE 115
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCI type II CAB)
Length = 270
Score = 63.9 bits (154), Expect = 4e-10
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +3
Query: 246 NGLEFDDKLHPGGP-FDPLGLAT-DPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
N L D +PGG FDPLG + P + L+ KEIKNGRLAM +++G + Q TG G
Sbjct: 187 NKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 246
Query: 420 PFENLCAHLSDP 455
P +NL AHL+DP
Sbjct: 247 PIDNLFAHLADP 258
Score = 37.0 bits (84), Expect = 0.049
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 16 LIHARWAMLGAAGFIIPERSTSLARTAAP 102
L+H+RWAMLGAAG IPE T + P
Sbjct: 108 LVHSRWAMLGAAGIFIPEFLTKIGVLNTP 136
Score = 34.7 bits (78), Expect = 0.25
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
FDPLGL +DP+ E+ + R AM G FI ++T G
Sbjct: 88 FDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIG 131
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
(LHCI type II CAB-7)
Length = 270
Score = 63.9 bits (154), Expect = 4e-10
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +3
Query: 246 NGLEFDDKLHPGGP-FDPLGLAT-DPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
N L D +PGG FDPLG + P + L+ KEIKNGRLAM +++G + Q TG G
Sbjct: 187 NKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 246
Query: 420 PFENLCAHLSDP 455
P +NL AHL+DP
Sbjct: 247 PIDNLFAHLADP 258
Score = 37.0 bits (84), Expect = 0.049
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 16 LIHARWAMLGAAGFIIPERSTSLARTAAP 102
L+H RWAMLGAAG IPE T + P
Sbjct: 108 LVHCRWAMLGAAGIFIPELLTKIGILNTP 136
Score = 34.3 bits (77), Expect = 0.32
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
FDPLGLA+DP+ + E+ + R AM G FI +T G
Sbjct: 88 FDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIG 131
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
[Contains: LH38 protein 1; LH38 protein 2; LH38 protein
3] (Fragment)
Length = 530
Score = 63.5 bits (153), Expect = 5e-10
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +3
Query: 231 YYRITNGLEFD----DKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQ 398
Y+R G + D+ +PG FDPL L TD +AA E+KNGRLA+ ++ G Q
Sbjct: 279 YWRGQGGFNWQKGELDRSYPG--FDPLNLTTDYTRAA-----EVKNGRLALTAVAGLTAQ 331
Query: 399 AYVTGEGPFENLCAHLSDPFGNNLLTVI-----SGAAE 497
TGE P NL AHL++P G N+ T + SGA E
Sbjct: 332 YLATGESPLANLSAHLANPIGANITTNLAMFASSGAKE 369
Score = 57.8 bits (138), Expect = 3e-08
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +3
Query: 270 LHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLS 449
++PG FDPL L TD + A EIKNGRLA+ ++LGF +Q +V G P NL HL
Sbjct: 108 IYPG--FDPLNLTTDYTKEA-----EIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQ 160
Query: 450 DPFGNNL 470
P N+
Sbjct: 161 QPLQRNI 167
Score = 50.8 bits (120), Expect = 3e-06
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +3
Query: 246 NGLEFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPF 425
N E D+ +PG FDPL L T+ + A EIKNGRLAM M G +Q++VTG+ P
Sbjct: 473 NDEETVDQSYPG--FDPLNLTTEYTKEA-----EIKNGRLAMNGMFGLEVQSHVTGKSPI 525
Query: 426 ENL 434
NL
Sbjct: 526 NNL 528
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 419
FDP GLA DPD +++ E+ +GRLAM +++G + Y+ G+G
Sbjct: 25 FDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-GKG 67
Score = 39.7 bits (91), Expect = 0.008
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFI 395
FDPL LA DPD A ++V E+ +GRLAM +G +
Sbjct: 210 FDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIV 245
Score = 32.0 bits (71), Expect = 1.6
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFI 395
FDP GLA DP ++V E+ + RL+M +++G +
Sbjct: 394 FDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLV 429
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
precursor (FCP)
Length = 208
Score = 47.4 bits (111), Expect = 4e-05
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 288 FDPLGLA-TDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGE 416
FDPLGLA +DPD+ L++ KE+ +GRLAM + GF Q V+G+
Sbjct: 154 FDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGD 197
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 282 GPFDPLGLATDPDQAALLKVKEIK--NGRLAMFSMLGFFIQ 398
G FDP G D+ + +++E + +GR+AM + LGF +Q
Sbjct: 44 GEFDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQ 84
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
precursor
Length = 261
Score = 38.9 bits (89), Expect = 0.013
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +3
Query: 273 HPGGPF-DPLGLA---------TDPDQAALLKVKEIKNGRLAMFSMLGFFIQA 401
+PGG F DPL LA D D+ LK+ EIK+ RLAM +ML F+ +A
Sbjct: 197 YPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEA 249
Score = 36.6 bits (83), Expect = 0.065
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFE 428
FDPLGL DP + E+ +GR AM ++LG F+ TG FE
Sbjct: 86 FDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFE 132
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
precursor (CAB-10A) (LHCP)
Length = 256
Score = 38.5 bits (88), Expect = 0.017
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +3
Query: 273 HPGGPF-DPLGLA---------TDPDQAALLKVKEIKNGRLAMFSMLGFFIQA 401
+PGG F DPL LA D ++ LKV EIK+ RLAM +ML F+ +A
Sbjct: 192 YPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEA 244
Score = 34.3 bits (77), Expect = 0.32
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFE 428
FDPLGL DP + E+ +GR AM ++LG F+ +G FE
Sbjct: 81 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFE 127
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
precursor (CAB-10B) (LHCP)
Length = 256
Score = 37.4 bits (85), Expect = 0.038
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +3
Query: 273 HPGGPF-DPLGLA---------TDPDQAALLKVKEIKNGRLAMFSMLGFFIQA 401
+PGG F DPL LA D ++ LK+ EIK+ RLAM +ML F+ +A
Sbjct: 192 YPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEA 244
Score = 34.3 bits (77), Expect = 0.32
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 288 FDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFE 428
FDPLGL DP + E+ +GR AM ++LG F+ +G FE
Sbjct: 81 FDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFE 127
>DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC|
3.1.3.16) (Mitogen-activated protein kinase phosphatase
5) (MAP kinase phosphatase 5) (MKP-5)
Length = 483
Score = 29.6 bits (65), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 596 STSCCIARTHAAEHQQPTAADGQSTASSQAG 504
STSCC T+ +HQ T A TA++ G
Sbjct: 77 STSCCTVATYDKDHQAQTQAIAAGTATTAIG 107
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,901,958
Number of Sequences: 219361
Number of extensions: 1244270
Number of successful extensions: 4366
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 4019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4291
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)