>CF010_HUMAN (Q5SRN2) Protein C6orf10|
          Length = 563

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 4   RGVATQVGPSIHRRPAGKSCAKDRSGLIIINGAKPRISAPRNGVTQRKRSSVTTS 168
           RG  +QV  S    P G+     +SGL+++ G + ++     GV +R+ S V  S
Sbjct: 332 RGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRRQESQVKKS 386

>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing|
           protein)
          Length = 1051

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
 Frame = -3

Query: 306 SLLVKPSSSLNRNT---------WKLQTVLSSVQAAATRH 214
           S+L+KPS S+ RN+         WK  +  S V ++ TRH
Sbjct: 879 SILIKPSDSVERNSHAFPAETIRWKSHSTSSEVASSDTRH 918

>VG15_BPPH8 (P14815) Replication protein 15|
          Length = 302

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 93  QWGEAEDLSTEKWCHTTKTLIGHHLVHD*SANWKN 197
           +WG AEDL T KW  +   LI          +W N
Sbjct: 192 KWGSAEDLETAKWISSRVKLINPTCKAPDMTSWSN 226

>DPOL_HPBGS (P03161) P protein (A protein) [Includes: DNA-directed DNA|
           polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC
           2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
          Length = 881

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = +2

Query: 98  GRSRGSQHREMVSHNENAHRSPPRSRLISKLEESDGQSLCLVAAACTLLST------VCN 259
           G+    +HR++  HN   H+S  RS+ IS          C+VA +  LL T        N
Sbjct: 175 GKPYSWEHRQLEQHNGQQHKSNIRSQQIS----------CMVANSGNLLYTHYHRDKSSN 224

Query: 260 FQVFLLSDDDGFTNKEISEFVTGTMEFAICYSY 358
            Q   LSD+    +KE +           CY+Y
Sbjct: 225 IQTRNLSDNVFKKSKESTR--------VRCYTY 249

>FADA_PSEPK (Q88L01) 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Fatty oxidation|
           complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA
           acyltransferase)
          Length = 391

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 95  MGRSRGSQHREMVSHNENAHRSPPRSRLISKLEESDGQ 208
           MGRS+G  HR   + + +AH       LISKL E +G+
Sbjct: 18  MGRSKGGMHRNTRAEDMSAH-------LISKLLERNGK 48

>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 303  LLVKPSSSLNRNTWKLQTVLSSVQAAATRHNDCPSDSSSLLINRERG 163
            L  +   ++  N  KLQ  ++ ++A   RH   PS SS+ L    RG
Sbjct: 1387 LTTQQRDTMQDNLLKLQQEMAELEAVLERHGSQPSHSSASLTADSRG 1433


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,053,361
Number of Sequences: 219361
Number of extensions: 1439049
Number of successful extensions: 3722
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3722
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)