ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baale02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CF010_HUMAN (Q5SRN2) Protein C6orf10 34 0.40
2ACOD_MESAU (Q64420) Acyl-CoA desaturase (EC 1.14.19.1) (Stearoyl... 30 4.4
3ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3 30 5.7
4ACOD1_RAT (P07308) Acyl-CoA desaturase 1 (EC 1.14.19.1) (Stearoy... 29 9.8
5LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper moti... 29 9.8

>CF010_HUMAN (Q5SRN2) Protein C6orf10|
          Length = 563

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 68  IDRGVATQVGPSIHRRPAGKSCAKDRSGLIIINGAKPRISAPRNGVTQRKRSSVTTS 238
           + RG  +QV  S    P G+     +SGL+++ G + ++     GV +R+ S V  S
Sbjct: 330 VPRGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRRQESQVKKS 386



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>ACOD_MESAU (Q64420) Acyl-CoA desaturase (EC 1.14.19.1) (Stearoyl-CoA|
           desaturase) (Fatty acid desaturase)
           (Delta(9)-desaturase)
          Length = 354

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 453 ILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDISWRIRLACHL 596
           ILP F P   W  WG  F       V   + Y L+L+ +W +  A HL
Sbjct: 223 ILPTFVP---WYFWGEAF--VNSLCVSTFLRYTLVLNATWLVNSAAHL 265



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>ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3|
          Length = 650

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 399 TMEFAICYSYIFLKLHELILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDI 566
           T E + C++Y+     E ++     L SW  W  +  +     + +TI+Y+ LL +
Sbjct: 589 TEEVSRCHNYVICTGEEFLMIQGIDLSSWGFWENHLALVCTMIILLTITYVQLLQV 644



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>ACOD1_RAT (P07308) Acyl-CoA desaturase 1 (EC 1.14.19.1) (Stearoyl-CoA|
           desaturase 1) (Fatty acid desaturase 1)
           (Delta(9)-desaturase 1)
          Length = 358

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 453 ILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDISWRIRLACHL 596
           ILP   P   W  WG  F       V   + Y L+L+ +W +  A HL
Sbjct: 227 ILPTLVP---WYCWGETF--LHSLFVSTFLRYTLVLNATWLVNSAAHL 269



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>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing|
           protein)
          Length = 1051

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
 Frame = -1

Query: 376 SLLVKPSSSLNRNT---------WKLQTVLSSVQAAATRH 284
           S+L+KPS S+ RN+         WK  +  S V ++ TRH
Sbjct: 879 SILIKPSDSVERNSHAFPAETIRWKSHSTSSEVASSDTRH 918


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,958,608
Number of Sequences: 219361
Number of extensions: 1998651
Number of successful extensions: 4941
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4941
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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