ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baald24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 Score = 739 bits (373), Expect = 0.0 Identities = 600/671 (89%), Gaps = 4/671 (0%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagnaggnatgtcgagtttgtggatg 60 ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| ||| Sbjct: 415 agcaagcggagcggtggggtgctg-agcttcacca-ggagg-atgttgagtttgtgaatg 471 Query: 61 tgaagagcagaccgtttgttattcgtagcagcgaccgagnaggtgaaatgtcatagtgta 120 ||||||||||||||||||||||||||||||| || || | |||||||||| ||||||||| Sbjct: 472 tgaagagcagaccgtttgttattcgtagcagtgatcgtg-aggtgaaatgccatagtgta 530 Query: 121 atcattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaattttgg 180 |||||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 531 atcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttgg 590 Query: 181 agcagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagggtcaa 240 || ||||||||||| |||||||||||||||||||||||||| || || | ||||||||| Sbjct: 591 agtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaa 650 Query: 241 gttcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttgacaaaa 300 |||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| ||| Sbjct: 651 gttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaa 710 Query: 301 tatgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaagctatg 360 ||||| | || ||||||||||||||||||| ||| || ||||||||||||||||||||| Sbjct: 711 tatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatg 770 Query: 361 caggaccggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtac 420 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 771 caggaccggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtac 830 Query: 421 atttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattc 480 ||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||| Sbjct: 831 atttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattc 890 Query: 481 agttgaggagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatg 540 | ||| ||||| ||| || ||||||||| ||||||||| |||||||||||||| |||| Sbjct: 891 aactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatg 950 Query: 541 ggatagggcatactccaaatagtcagctgctagaaggtcaaattgaacttgatagttctg 600 | ||||| || |||||||| |||||| || || ||||||||||||| ||||| | ||| Sbjct: 951 gcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctg 1010 Query: 601 gatatattttggttgaggaaggcacggcaaaaacttcagttgatggcgtatttgctgctg 660 | |||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 1011 gttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctg 1070 Query: 661 gtgatgtgcag 671 ||||||||||| Sbjct: 1071 gtgatgtgcag 1081
>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 Score = 392 bits (198), Expect = e-106 Identities = 329/368 (89%), Gaps = 4/368 (1%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagnaggnatgtcgagtttgtggatg 60 ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| ||| Sbjct: 388 agcaagcggagcggtggggtgctg-agcttcacca-ggagg-atgttgagtttgtgaatg 444 Query: 61 tgaagagcagaccgtttgttattcgtagcagcgaccgagnaggtgaaatgtcatagtgta 120 ||||||||||||||||||||||||||||||| || || | |||||||||| ||||||||| Sbjct: 445 tgaagagcagaccgtttgttattcgtagcagtgatcgtg-aggtgaaatgccatagtgta 503 Query: 121 atcattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaattttgg 180 |||||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 504 atcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttgg 563 Query: 181 agcagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagggtcaa 240 || ||||||||||| |||||||||||||||||||||||||| || || | ||||||||| Sbjct: 564 agtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaa 623 Query: 241 gttcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttgacaaaa 300 |||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| ||| Sbjct: 624 gttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaa 683 Query: 301 tatgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaagctatg 360 ||||| | || ||||||||||||||||||| ||| || ||||||||||||||||||||| Sbjct: 684 tatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatg 743 Query: 361 caggaccg 368 |||||||| Sbjct: 744 caggaccg 751 Score = 303 bits (153), Expect = 4e-79 Identities = 249/281 (88%) Strand = Plus / Plus Query: 391 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 450 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 810 Query: 451 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 510 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 811 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 870 Query: 511 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 570 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 871 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 930 Query: 571 tagaaggtcaaattgaacttgatagttctggatatattttggttgaggaaggcacggcaa 630 || ||||||||||||| ||||| | |||| |||||||||||||| |||||||| |||| Sbjct: 931 tacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaa 990 Query: 631 aaacttcagttgatggcgtatttgctgctggtgatgtgcag 671 |||| ||||||||||| |||||||||||||||||||||||| Sbjct: 991 aaacatcagttgatggtgtatttgctgctggtgatgtgcag 1031
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 349 bits (176), Expect = 7e-93 Identities = 272/304 (89%) Strand = Plus / Plus Query: 368 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 427 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27643177 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 27643236 Query: 428 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 487 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 27643237 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 27643296 Query: 488 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 547 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 27643297 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 27643356 Query: 548 gcatactccaaatagtcagctgctagaaggtcaaattgaacttgatagttctggatatat 607 || |||||||| |||||| || || ||||||||||||| ||||| | |||| ||||| Sbjct: 27643357 acacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatat 27643416 Query: 608 tttggttgaggaaggcacggcaaaaacttcagttgatggcgtatttgctgctggtgatgt 667 ||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 27643417 tttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgt 27643476 Query: 668 gcag 671 |||| Sbjct: 27643477 gcag 27643480 Score = 321 bits (162), Expect = 2e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 101 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 160 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 27642273 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 27642332 Query: 161 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 220 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27642333 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 27642392 Query: 221 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 280 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 27642393 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 27642452 Query: 281 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 340 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 27642453 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 27642512 Query: 341 tacgagcatccaaagctatgcaggaccggt 370 |||||||||||||||||||||||||||||| Sbjct: 27642513 tacgagcatccaaagctatgcaggaccggt 27642542 Score = 97.6 bits (49), Expect = 5e-17 Identities = 83/91 (91%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagnaggnatgtcgagtttgtggatg 60 ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| ||| Sbjct: 27641746 agcaagcggagcggtggggtgctg-agcttcacca-ggagg-atgttgagtttgtgaatg 27641802 Query: 61 tgaagagcagaccgtttgttattcgtagcag 91 ||||||||||||||||||||||||||||||| Sbjct: 27641803 tgaagagcagaccgtttgttattcgtagcag 27641833
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 349 bits (176), Expect = 7e-93 Identities = 272/304 (89%) Strand = Plus / Plus Query: 368 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 427 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 100170 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 100229 Query: 428 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 487 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 100230 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 100289 Query: 488 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 547 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 100290 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 100349 Query: 548 gcatactccaaatagtcagctgctagaaggtcaaattgaacttgatagttctggatatat 607 || |||||||| |||||| || || ||||||||||||| ||||| | |||| ||||| Sbjct: 100350 acacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatat 100409 Query: 608 tttggttgaggaaggcacggcaaaaacttcagttgatggcgtatttgctgctggtgatgt 667 ||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 100410 tttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgt 100469 Query: 668 gcag 671 |||| Sbjct: 100470 gcag 100473 Score = 321 bits (162), Expect = 2e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 101 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 160 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 99266 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 99325 Query: 161 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 220 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 99326 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 99385 Query: 221 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 280 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 99386 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 99445 Query: 281 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 340 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 99446 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 99505 Query: 341 tacgagcatccaaagctatgcaggaccggt 370 |||||||||||||||||||||||||||||| Sbjct: 99506 tacgagcatccaaagctatgcaggaccggt 99535 Score = 97.6 bits (49), Expect = 5e-17 Identities = 83/91 (91%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagnaggnatgtcgagtttgtggatg 60 ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| ||| Sbjct: 98739 agcaagcggagcggtggggtgctg-agcttcacca-ggagg-atgttgagtttgtgaatg 98795 Query: 61 tgaagagcagaccgtttgttattcgtagcag 91 ||||||||||||||||||||||||||||||| Sbjct: 98796 tgaagagcagaccgtttgttattcgtagcag 98826
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 349 bits (176), Expect = 7e-93 Identities = 272/304 (89%) Strand = Plus / Plus Query: 368 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 427 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22279 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 22338 Query: 428 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 487 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 22339 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 22398 Query: 488 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 547 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 22399 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 22458 Query: 548 gcatactccaaatagtcagctgctagaaggtcaaattgaacttgatagttctggatatat 607 || |||||||| |||||| || || ||||||||||||| ||||| | |||| ||||| Sbjct: 22459 acacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatat 22518 Query: 608 tttggttgaggaaggcacggcaaaaacttcagttgatggcgtatttgctgctggtgatgt 667 ||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 22519 tttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgt 22578 Query: 668 gcag 671 |||| Sbjct: 22579 gcag 22582 Score = 321 bits (162), Expect = 2e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 101 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 160 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 21375 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 21434 Query: 161 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 220 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 21435 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 21494 Query: 221 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 280 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 21495 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 21554 Query: 281 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 340 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 21555 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 21614 Query: 341 tacgagcatccaaagctatgcaggaccggt 370 |||||||||||||||||||||||||||||| Sbjct: 21615 tacgagcatccaaagctatgcaggaccggt 21644 Score = 97.6 bits (49), Expect = 5e-17 Identities = 83/91 (91%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagnaggnatgtcgagtttgtggatg 60 ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| ||| Sbjct: 20848 agcaagcggagcggtggggtgctg-agcttcacca-ggagg-atgttgagtttgtgaatg 20904 Query: 61 tgaagagcagaccgtttgttattcgtagcag 91 ||||||||||||||||||||||||||||||| Sbjct: 20905 tgaagagcagaccgtttgttattcgtagcag 20935
>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680; T32G6.20) mRNA, complete cds Length = 1802 Score = 111 bits (56), Expect = 3e-21 Identities = 251/316 (79%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 617 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 676 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 677 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 736 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 336 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 737 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 796 Query: 337 caactacgagcatccaaagctatgcaggaccggttgattatggcgaatgtttcagagtac 396 || | |||| ||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 797 cagttgagagcttccaaggctatgcaagataggttggttatggcgaatgtttcagagtga 856 Query: 397 tcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcggcaata 456 ||||||| || ||||| ||||| |||| ||| || ||| | ||||| || | |||| | Sbjct: 857 tcaacaatccaaacatcacagtgcattacaacacggaaaccgtggacgtattgagcaaca 916 Query: 457 ccaaaggacagatgtc 472 |||| ||||||||||| Sbjct: 917 ccaagggacagatgtc 932 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1096 tcagttgaaggtgtatttgctgcaggagatgtgcag 1131
>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/ oxidoreductase/ thioredoxin-disulfide reductase AT2G41680 mRNA, complete cds Length = 1800 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 623 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 682 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 683 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 742 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 743 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 795 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1079 tcagttgaaggtgtatttgctgcaggagatgtgcag 1114
>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680/T32G6.20) mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 607 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 666 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 667 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 726 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 727 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 779 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1063 tcagttgaaggtgtatttgctgcaggagatgtgcag 1098
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 79032 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 78973 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 78972 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 78913 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 78912 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 78860 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 368 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 427 ||||| ||||||||||||||||||||| ||||||| || ||||| ||||| |||| ||| Sbjct: 78480 ggttggttatggcgaatgtttcagagtgatcaacaatccaaacatcacagtgcattacaa 78421 Query: 428 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 472 || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 78420 cacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 78376 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 78212 tcagttgaaggtgtatttgctgcaggagatgtgcag 78177
>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds Length = 1783 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 620 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 679 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 680 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 739 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 740 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 792 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1076 tcagttgaaggtgtatttgctgcaggagatgtgcag 1111
>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 613 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 672 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 673 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 732 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 733 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 785 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1069 tcagttgaaggtgtatttgctgcaggagatgtgcag 1104
>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 250 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 309 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 310 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 369 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 370 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 422 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 706 tcagttgaaggtgtatttgctgcaggagatgtgcag 741
>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 73.8 bits (37), Expect = 7e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 157 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 216 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 624 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 683 Query: 217 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 276 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 684 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 743 Query: 277 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 329 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 744 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 796 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 1079 tcagttgaaggtgtatttgctgcaggagatgtgcag 1114
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 187 ggtatcagcgcatgtgcaatatgtgatgg 215 ||||| ||||||||||||||||||||||| Sbjct: 1148142 ggtattagcgcatgtgcaatatgtgatgg 1148170
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 572 agaaggtcaaattgaacttgat 593 |||||||||||||||||||||| Sbjct: 122482 agaaggtcaaattgaacttgat 122503
>dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete genome Length = 17388 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 actcaacaaccccaacataaca 416 |||||||||||||||||||||| Sbjct: 13569 actcaacaaccccaacataaca 13590
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 572 agaaggtcaaattgaacttgat 593 |||||||||||||||||||||| Sbjct: 1837648 agaaggtcaaattgaacttgat 1837669
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 640 ttgatggcgtatttgctgctggtgatgtg 668 |||||||||| ||||| |||||||||||| Sbjct: 689105 ttgatggcgtgtttgcagctggtgatgtg 689077
>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete sequence Length = 204167 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gatatatttgacaaaatatgc 305 ||||||||||||||||||||| Sbjct: 52265 gatatatttgacaaaatatgc 52285
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 aaggtctattttatgggatag 546 ||||||||||||||||||||| Sbjct: 126788 aaggtctattttatgggatag 126808
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 aaggtctattttatgggatag 546 ||||||||||||||||||||| Sbjct: 104962 aaggtctattttatgggatag 104982
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5 Length = 341050 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gttggaggtggagatacagct 273 ||||||||||||||||||||| Sbjct: 249327 gttggaggtggagatacagct 249347
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 caaccccaacataacagtaca 421 ||||||||||||||||||||| Sbjct: 50963 caaccccaacataacagtaca 50983
>gb|L36129.1|HNNNTR Helianthus annuus NADPH thioredoxin reductase mRNA, 3' end Length = 491 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tttgctgctggtgatgtgcag 671 ||||||||||||||||||||| Sbjct: 223 tttgctgctggtgatgtgcag 243
>gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase gene, complete cds Length = 1377 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gttggaggtggagatacagct 273 ||||||||||||||||||||| Sbjct: 1122 gttggaggtggagatacagct 1142
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aaagttcttgaagtgaaagg 529 |||||||||||||||||||| Sbjct: 103759 aaagttcttgaagtgaaagg 103740
>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence Length = 234041 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 atatatttgacaaaatatgc 305 |||||||||||||||||||| Sbjct: 154499 atatatttgacaaaatatgc 154480
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gtatttgctgctggtgatgt 667 |||||||||||||||||||| Sbjct: 346982 gtatttgctgctggtgatgt 347001
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 645 ggcgtatttgctgctggtgatgtg 668 ||||||||||| |||||||||||| Sbjct: 1800665 ggcgtatttgccgctggtgatgtg 1800688
>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence Length = 148930 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcgatactggagaggaaaa 511 |||||||||||||||||||| Sbjct: 134712 atcgatactggagaggaaaa 134731
>gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B5 genomic sequence Length = 35254 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tgtgcaatatgtgatggagc 218 |||||||||||||||||||| Sbjct: 17891 tgtgcaatatgtgatggagc 17872
>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete sequence Length = 185850 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 164 gtgaagaagaattttggagcagaggtat 191 ||||||||||| ||||||| |||||||| Sbjct: 104313 gtgaagaagaaatttggagaagaggtat 104340
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 ggatatattttggttgagga 619 |||||||||||||||||||| Sbjct: 372774 ggatatattttggttgagga 372793
>gb|AY093250.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680) mRNA, complete cds Length = 803 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 636 tcagttgatggcgtatttgctgctggtgatgtgcag 671 |||||||| || ||||||||||| || ||||||||| Sbjct: 169 tcagttgaaggtgtatttgctgcaggagatgtgcag 204
>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence Length = 158314 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 agtttgtggatgtgaagagc 68 |||||||||||||||||||| Sbjct: 109722 agtttgtggatgtgaagagc 109741
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 aaaagttcttgaagtgaaag 528 |||||||||||||||||||| Sbjct: 108519 aaaagttcttgaagtgaaag 108500
>dbj|D78346.1|RIRVR144 Rickettsia typhi gene for 47 kDa protein, complete cds Length = 3024 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttgatagttctggatatatt 608 |||||||||||||||||||| Sbjct: 1152 ttgatagttctggatatatt 1171
>gb|L31933.1|RIRGM47G Rickettsia tsutsugamushi (strain Gm47) gene, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttgatagttctggatatatt 608 |||||||||||||||||||| Sbjct: 329 ttgatagttctggatatatt 348
>gb|L31935.1|RIRBR47G Rickettsia tsutsugamushi (strain Br47) gene, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttgatagttctggatatatt 608 |||||||||||||||||||| Sbjct: 329 ttgatagttctggatatatt 348
>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete sequence Length = 120525 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 tgatagttctggatatattt 609 |||||||||||||||||||| Sbjct: 37080 tgatagttctggatatattt 37061
>gb|L11697.1|RIR47KDA Rickettsia tsutsugamushi (clone Pkt5) 47 kDa protein gene, complete cds Length = 2228 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttgatagttctggatatatt 608 |||||||||||||||||||| Sbjct: 629 ttgatagttctggatatatt 648 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,327,207 Number of Sequences: 3902068 Number of extensions: 5327207 Number of successful extensions: 95604 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95394 Number of HSP's gapped (non-prelim): 200 length of query: 671 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 648 effective length of database: 17,143,297,704 effective search space: 11108856912192 effective search space used: 11108856912192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
