>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  232 bits (591), Expect(2) = 9e-83
 Identities = 115/115 (100%), Positives = 115/115 (100%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT
Sbjct: 313 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 372

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 373 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 94.7 bits (234), Expect(2) = 9e-83
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF
Sbjct: 268 VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 310

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  201 bits (512), Expect(2) = 2e-73
 Identities = 95/115 (82%), Positives = 107/115 (93%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  
Sbjct: 313 DNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPE 372

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 373 FEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427



 Score = 94.0 bits (232), Expect(2) = 2e-73
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF
Sbjct: 268 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIF 310

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  202 bits (515), Expect(2) = 2e-73
 Identities = 95/115 (82%), Positives = 107/115 (93%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP T
Sbjct: 310 DNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPT 369

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           F+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 370 FDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424



 Score = 92.8 bits (229), Expect(2) = 2e-73
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 265 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 307

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  194 bits (494), Expect(2) = 4e-70
 Identities = 90/115 (78%), Positives = 106/115 (92%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP T
Sbjct: 323 DNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPT 382

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 383 FEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437



 Score = 89.7 bits (221), Expect(2) = 4e-70
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF
Sbjct: 278 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIF 320

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  189 bits (480), Expect(2) = 2e-69
 Identities = 87/114 (76%), Positives = 105/114 (92%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP T
Sbjct: 319 DGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPT 378

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 479
           FEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 379 FEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432



 Score = 92.8 bits (229), Expect(2) = 2e-69
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 274 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 316

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  188 bits (478), Expect(2) = 4e-69
 Identities = 91/113 (80%), Positives = 103/113 (91%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP T
Sbjct: 327 DNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPT 386

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 476
           FEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 387 FEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439



 Score = 92.8 bits (229), Expect(2) = 4e-69
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 282 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 324

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  187 bits (474), Expect(2) = 1e-68
 Identities = 87/115 (75%), Positives = 103/115 (89%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +
Sbjct: 323 DNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPS 382

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 383 FEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 92.8 bits (229), Expect(2) = 1e-68
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 278 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 320

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  187 bits (474), Expect(2) = 1e-68
 Identities = 90/111 (81%), Positives = 103/111 (92%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP T
Sbjct: 322 DNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPT 381

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 470
           FEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 382 FEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432



 Score = 92.8 bits (229), Expect(2) = 1e-68
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 277 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 319

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  186 bits (473), Expect(2) = 1e-68
 Identities = 86/113 (76%), Positives = 103/113 (91%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP T
Sbjct: 323 DNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPT 382

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 476
           FEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 383 FEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435



 Score = 92.8 bits (229), Expect(2) = 1e-68
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 278 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 320

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  185 bits (469), Expect(2) = 2e-67
 Identities = 90/114 (78%), Positives = 99/114 (86%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP T
Sbjct: 327 DNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPT 386

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 479
           FEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 387 FEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440



 Score = 90.5 bits (223), Expect(2) = 2e-67
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF
Sbjct: 282 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIF 324

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  181 bits (459), Expect(2) = 3e-66
 Identities = 85/115 (73%), Positives = 101/115 (87%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  
Sbjct: 321 DKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPV 380

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 381 FEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 90.5 bits (223), Expect(2) = 3e-66
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF
Sbjct: 276 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIF 318

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  177 bits (448), Expect(2) = 5e-66
 Identities = 79/114 (69%), Positives = 103/114 (90%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP T
Sbjct: 325 DGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPT 384

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 479
           F+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 385 FDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438



 Score = 94.0 bits (232), Expect(2) = 5e-66
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF
Sbjct: 280 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIF 322

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  179 bits (455), Expect(2) = 6e-66
 Identities = 86/115 (74%), Positives = 100/115 (86%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  
Sbjct: 323 DKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPV 382

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 482
           FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 383 FEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 90.9 bits (224), Expect(2) = 6e-66
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 278 VPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 320

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  169 bits (429), Expect(2) = 2e-63
 Identities = 76/114 (66%), Positives = 101/114 (88%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP T
Sbjct: 327 DGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPT 386

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 479
           F+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 387 FDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440



 Score = 92.8 bits (229), Expect(2) = 2e-63
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF
Sbjct: 282 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF 324

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  141 bits (355), Expect(2) = 8e-54
 Identities = 66/90 (73%), Positives = 77/90 (85%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P T
Sbjct: 320 DGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPT 379

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 407
           F+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 380 FDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



 Score = 89.0 bits (219), Expect(2) = 8e-54
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF
Sbjct: 275 VPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIF 317

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  117 bits (293), Expect(2) = 1e-45
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V 
Sbjct: 296 DNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVA 354

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 437
             +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 355 MPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394



 Score = 85.5 bits (210), Expect(2) = 1e-45
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIF
Sbjct: 251 VPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIF 293

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 95.5 bits (236), Expect(2) = 2e-37
 Identities = 42/94 (44%), Positives = 63/94 (67%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  
Sbjct: 196 DGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPA 255

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 419
           F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 256 FKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289



 Score = 79.7 bits (195), Expect(2) = 2e-37
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+  GIF
Sbjct: 151 VPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIF 193

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 87.8 bits (216), Expect(2) = 9e-36
 Identities = 40/94 (42%), Positives = 61/94 (64%)
 Frame = +3

Query: 138 DNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  
Sbjct: 196 DGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPE 255

Query: 318 FEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 419
           F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 256 FKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289



 Score = 82.0 bits (201), Expect(2) = 9e-36
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   VPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIF 130
           VPI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+  GIF
Sbjct: 151 VPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIF 193

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 168 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 347
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = -1

Query: 287 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 135
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 134 AGRYPCR 114
           A   P R
Sbjct: 200 AADAPAR 206

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +3

Query: 312 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 467
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 468 GSFYG*KILHTHPPSLAA 521
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 165 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 344
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 345 KLLEYGHMLVQEQDNVKRV 401
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = +3

Query: 312 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 467
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 468 GSFYG*KILHTHPPSLAA 521
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 415 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 311
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>RL15E_HALMA (P60618) 50S ribosomal protein L15e (50S ribosomal protein LC12)|
          Length = 195

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 239 LIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGAGR 126
           +I++ P+  + +  + LSW   DD  DR+   + GAGR
Sbjct: 131 VILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGR 168

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 249 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 356
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 141 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 317
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 318 FEQPKMTVEKLLEYGHM 368
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165

>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = +3

Query: 312 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 467
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 468 GSFYG*KILHTHPPSLAA 521
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355

>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 153 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 323
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 868

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 26/103 (25%), Positives = 42/103 (40%)
 Frame = -1

Query: 479 VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 300
           VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671 VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 299 RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVD 171
           + +  +A V        +  + V+  + Q+T +   L  EG++
Sbjct: 729 KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLE 763

>EF1A3_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1)|
           (EF-1AO1)
          Length = 461

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = +3

Query: 312 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 467
           VTF    +T E K +E  H  + E         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 468 GSFYG*KILHTHPPSLAA 521
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B)|
          Length = 716

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 231 DDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPK 332
           D+E  +  G+ G+E +  + +  RDG VT+E  K
Sbjct: 186 DEETNEISGAMGLEKVLDKYLKERDGYVTYESDK 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,426,588
Number of Sequences: 219361
Number of extensions: 1405048
Number of successful extensions: 4268
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4267
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)