ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baald23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1021 bits (515), Expect = 0.0 Identities = 535/539 (99%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 1002 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 1062 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1063 ggtatcttccag-accgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacacctt 1121 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 1181 Query: 242 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 1241 Query: 302 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 1301 Query: 362 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1302 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 1361 Query: 422 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 1421 Query: 482 ttagaaaattctccatac-acacccaccatctcttgctgcataggaggaggtaaaggag 539 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1422 ttagaaaattctccatacaacacccaccatctcttgctgcataggaggaggtaaaggag 1480
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 922 bits (465), Expect = 0.0 Identities = 478/481 (99%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 747 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 807 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 808 ggtatcttccag-accgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacacctt 866 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 867 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 926 Query: 242 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 986 Query: 302 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 1046 Query: 362 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 1106 Query: 422 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 1166 Query: 482 t 482 | Sbjct: 1167 t 1167
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 888 bits (448), Expect = 0.0 Identities = 515/536 (96%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 13 gtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgat 72 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 73 ggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaag 132 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133 ggtatcttccag-accgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacacctt 191 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 192 cccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggt 251 Query: 242 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 301 |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 252 gcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcg 311 Query: 302 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 361 |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 312 ggacggaccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacgg 371 Query: 362 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 431 Query: 422 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 481 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 432 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttctacgg 491 Query: 482 ttagaaaattctccatacacacccaccatctcttgctgcataggaggaggtaaagg 537 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 ttagaacattctccatacacacccaccatctcttgctgcataggaggaggtaaagg 547
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 888 bits (448), Expect = 0.0 Identities = 515/536 (96%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 863 gtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgat 922 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 923 ggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaag 982 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 983 ggtatcttccag-accgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacacctt 1041 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1042 cccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggt 1101 Query: 242 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 301 |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1102 gcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctggtgaactcgcg 1161 Query: 302 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 361 |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1162 ggacggaccagtgacctttgagcagccaaagatgacagtggagaagctgctagagtacgg 1221 Query: 362 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacat 1281 Query: 422 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacgg 481 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1282 gagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggtaccttctacgg 1341 Query: 482 ttagaaaattctccatacacacccaccatctcttgctgcataggaggaggtaaagg 537 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 ttagaacattctccatacacacccaccatctcttgctgcataggaggaggtaaagg 1397
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 684 bits (345), Expect = 0.0 Identities = 489/535 (91%), Gaps = 3/535 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||||||||| ||||| || || |||||||| ||| Sbjct: 877 cccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggt 936 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 ||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 937 cgtatggagaagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggt 996 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 997 atcttccag-accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttccc 1055 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 |||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1056 aggacagtccatcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcg 1115 Query: 245 caagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcggga 304 ||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1116 caagtgggtgtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcggga 1175 Query: 305 cgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggca 364 ||| ||||| |||||||||||||| |||||||| || |||||| |||| |||||||| || Sbjct: 1176 cggacccgtcaccttcgagcagcccaagatgacggtggagaagttgctggagtacggcca 1235 Query: 365 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 424 |||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1236 catgcttgtccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgag 1295 Query: 425 ccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggtta 484 ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 1296 ccaggcagctctgggtgatgcgaacaaggatgccatgaagactggttccttctacggtta 1355 Query: 485 gaaaattctccatacacacccaccatctcttgctgcataggaggaggtaaaggag 539 ||| | ||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 gaacactcttcat--acacccaccatctcttgctgcataggaggaggtaaaggag 1408
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 664 bits (335), Expect = 0.0 Identities = 335/335 (100%) Strand = Plus / Plus Query: 198 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 258 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 438 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320 Query: 498 acacacccaccatctcttgctgcataggaggaggt 532 ||||||||||||||||||||||||||||||||||| Sbjct: 7321 acacacccaccatctcttgctgcataggaggaggt 7355 Score = 375 bits (189), Expect = e-100 Identities = 196/197 (99%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6685 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 6744 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6745 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 6804 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6805 ggtatcttccag-accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 6863 Query: 182 cccaggacaatccattg 198 ||||||||||||||||| Sbjct: 6864 cccaggacaatccattg 6880 Score = 198 bits (100), Expect = 1e-47 Identities = 218/256 (85%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 3558 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgac 3617 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 3618 gggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaag 3677 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||||| ||| |||||| | || || | | | || |||||||| Sbjct: 3678 ggcatcttcc-gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacacctt 3736 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || || ||||| ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 3737 cccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggt 3796 Query: 242 gcgcaagtgggtcggc 257 |||||||||||||||| Sbjct: 3797 gcgcaagtgggtcggc 3812 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 378 gagcaggacaatgtcaagcgtgtgcagct 406 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 581 bits (293), Expect = e-163 Identities = 426/469 (90%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 |||||||| ||||| || |||||||| ||||| || || || | ||| |||||||||||| Sbjct: 896 gtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatggag 955 Query: 74 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 133 ||||| |||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 956 aagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1015 Query: 134 caccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 193 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1016 -accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtc 1074 Query: 194 cattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 253 ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1075 catcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 1134 Query: 254 cggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgt 313 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1135 gtcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgt 1194 Query: 314 gaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgt 373 |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| || Sbjct: 1195 caccttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgt 1254 Query: 374 ccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagc 433 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1255 ccaggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagc 1314 Query: 434 tctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 482 |||||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 1315 tctgggtgatgcgaacaaggatgccatgaagactggttccttctacggt 1363
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 521 bits (263), Expect = e-145 Identities = 296/307 (96%) Strand = Plus / Plus Query: 198 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 257 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 258 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 317 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 438 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 497 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301 Query: 498 acacacc 504 ||||||| Sbjct: 302 acacacc 308
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 839 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 898 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 899 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 958 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 959 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1017 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1018 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1077 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1078 caagtgggt 1086 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 834 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 893 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 894 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 953 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 954 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1012 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1013 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1072 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1073 caagtgggt 1081 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 450 caggatgcgatgaagactggttccttctacgg 481 || || ||||||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 88 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 147 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 148 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 207 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 208 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 266 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 267 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 326 Query: 245 caagtgggt 253 ||||||||| Sbjct: 327 caagtgggt 335 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 882 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 941 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 942 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 1001 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 1002 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1060 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1061 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1120 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1121 caagtgggt 1129 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 833 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 892 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 893 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 952 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 953 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1011 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1012 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1071 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1072 caagtgggt 1080 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 871 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 930 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 931 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 990 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 991 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1049 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1050 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1109 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1110 caagtgggt 1118 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 870 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 929 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 930 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 989 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 990 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1048 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1049 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1108 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1109 caagtgggt 1117 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 654 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 713 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 714 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 773 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 774 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 832 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 833 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 892 Query: 245 caagtgggt 253 ||||||||| Sbjct: 893 caagtgggt 901 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 875 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 934 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 935 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 994 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 995 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1053 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1054 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1113 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1114 caagtgggt 1122 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 450 caggatgcgatgaagactggttccttctacggtt 483 || || ||||||||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 224 bits (113), Expect = 2e-55 Identities = 216/249 (86%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 869 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 928 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 929 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 988 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 989 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 1047 Query: 185 aggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcg 244 ||| |||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct: 1048 aggccaatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcg 1107 Query: 245 caagtgggt 253 ||||||||| Sbjct: 1108 caagtgggt 1116 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 450 caggatgcgatgaagactggttccttctacgg 481 || || ||||||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 216 bits (109), Expect = 6e-53 Identities = 332/405 (81%), Gaps = 1/405 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||||||||| ||||| || || ||||| || Sbjct: 839 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggac 898 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 899 ggccgcatggagaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaag 958 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||||| ||| |||||| | || || | | | || |||||||| Sbjct: 959 ggcatcttcc-gcaccgacaacgtccccgacgaggccgtggtgaggctggtggacacctt 1017 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || || ||||| ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 1018 cccggggcagtccatcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggt 1077 Query: 242 gcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcg 301 |||||||||||||||| | ||| |||||||||| |||| |||| || ||||| | Sbjct: 1078 gcgcaagtgggtcggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccag 1137 Query: 302 ggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgg 361 ||| ||||| ||| ||||| ||||| |||||||| |||||||||| | |||||||| Sbjct: 1138 ggaggggccgccgacgttcgaccagcccaagatgaccatcgagaagctcatggagtacgg 1197 Query: 362 gcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagct 406 |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 1198 ccacatgctggtccaggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 198 bits (100), Expect = 1e-47 Identities = 218/256 (85%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 989 gtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgac 1048 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 1049 gggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaag 1108 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||||| ||| |||||| | || || | | | || |||||||| Sbjct: 1109 ggcatcttcc-gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacacctt 1167 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || || ||||| ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 1168 cccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggt 1227 Query: 242 gcgcaagtgggtcggc 257 |||||||||||||||| Sbjct: 1228 gcgcaagtgggtcggc 1243 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 378 gagcaggacaatgtcaagcgtgtgcagct 406 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 182 bits (92), Expect = 8e-43 Identities = 168/192 (87%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 108878 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 108819 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 108818 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 108759 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 108758 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 108700 Query: 185 aggacaatccat 196 ||| |||||||| Sbjct: 108699 aggccaatccat 108688 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 450 caggatgcgatgaagactggttccttctacggttaga 486 || || |||||||||||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 68 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 127 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 128 ttcc 131 |||| Sbjct: 112459 ttcc 112456 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 204 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 253 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactc 298 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 182 bits (92), Expect = 8e-43 Identities = 168/192 (87%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 30755 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 30696 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 30695 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 30636 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 30635 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 30577 Query: 185 aggacaatccat 196 ||| |||||||| Sbjct: 30576 aggccaatccat 30565 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 450 caggatgcgatgaagactggttccttctacggttaga 486 || || |||||||||||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 68 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 127 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 128 ttcc 131 |||| Sbjct: 34336 ttcc 34333 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 204 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 253 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactc 298 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 182 bits (92), Expect = 8e-43 Identities = 168/192 (87%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 28304017 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 28303958 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 28303957 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 28303898 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 28303897 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 28303839 Query: 185 aggacaatccat 196 ||| |||||||| Sbjct: 28303838 aggccaatccat 28303827 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 450 caggatgcgatgaagactggttccttctacggttaga 486 || || |||||||||||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 68 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 127 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 128 ttcc 131 |||| Sbjct: 28307598 ttcc 28307595 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 204 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 253 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactc 298 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 182 bits (92), Expect = 8e-43 Identities = 168/192 (87%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 28286466 cccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacggg 28286407 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 28286406 cgtatggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggt 28286347 Query: 125 atcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttccc 184 ||||||| |||||||||| ||| |||||| |||||||||||||||||| |||||| Sbjct: 28286346 atcttcc-gcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttccc 28286288 Query: 185 aggacaatccat 196 ||| |||||||| Sbjct: 28286287 aggccaatccat 28286276 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 329 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 330 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 389 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 390 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 449 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 450 caggatgcgatgaagactggttccttctacggttaga 486 || || |||||||||||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 68 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 127 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 128 ttcc 131 |||| Sbjct: 28290047 ttcc 28290044 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 204 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 253 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gagaacattggcaagaggctggtgaactc 298 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 850 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 909 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 910 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 14264 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 14205 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14204 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 927 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 986 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 987 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3019 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 3078 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3079 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 155 bits (78), Expect = 2e-34 Identities = 208/250 (83%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 826 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 885 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 886 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 945 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||| ||| ||||||| ||| | ||| |||| ||||| ||||||||||||| Sbjct: 946 ggtatctt-caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacacctt 1004 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || |||||||||||||| |||||||| ||| | || |||| |||||||| ||||| Sbjct: 1005 ccccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggt 1064 Query: 242 gcgcaagtgg 251 | | |||||| Sbjct: 1065 gaggaagtgg 1074 Score = 103 bits (52), Expect = 6e-19 Identities = 166/204 (81%) Strand = Plus / Plus Query: 282 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 341 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 342 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 401 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 402 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 461 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 462 aagactggttccttctacggttag 485 |||||||| |||||||| |||||| Sbjct: 1285 aagactggatccttctatggttag 1308
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 155 bits (78), Expect = 2e-34 Identities = 208/250 (83%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 689 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 748 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 749 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 808 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||| ||| ||||||| ||| | ||| |||| ||||| ||||||||||||| Sbjct: 809 ggtatctt-caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacacctt 867 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || |||||||||||||| |||||||| ||| | || |||| |||||||| ||||| Sbjct: 868 ccccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggt 927 Query: 242 gcgcaagtgg 251 | | |||||| Sbjct: 928 gaggaagtgg 937 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 282 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 341 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 342 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 401 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 402 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 461 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 462 aagactggttccttcta 478 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 155 bits (78), Expect = 2e-34 Identities = 208/250 (83%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 525 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 584 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 585 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 644 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||| ||| ||||||| ||| | ||| |||| ||||| ||||||||||||| Sbjct: 645 ggtatctt-caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacacctt 703 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || |||||||||||||| |||||||| ||| | || |||| |||||||| ||||| Sbjct: 704 ccccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggt 763 Query: 242 gcgcaagtgg 251 | | |||||| Sbjct: 764 gaggaagtgg 773 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 279 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 338 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 339 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 398 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 399 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 458 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 459 atgaagactggttccttctacggttag 485 || |||||||| |||||||| |||||| Sbjct: 981 atcaagactggatccttctatggttag 1007
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 155 bits (78), Expect = 2e-34 Identities = 208/250 (83%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| || |||||||| || || |||||||| Sbjct: 719 gtgcccatcatcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgac 778 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 ||||||||||||||||||||||||||||||||| | || ||||| |||| ||||||| Sbjct: 779 ggtcgtatggagaagttctactgggctcccaccagggatgaccgggtcggcgtctgcacc 838 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 |||||||| ||| ||||||| ||| | ||| |||| ||||| ||||||||||||| Sbjct: 839 ggtatctt-caggtccgacaacgtccccaaggaggatgtcatcaagctcgtcgacacctt 897 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || |||||||||||||| |||||||| ||| | || |||| |||||||| ||||| Sbjct: 898 ccccggccaatccattgacttcttcggtgcactgagggcgagggtctacgacgacgaggt 957 Query: 242 gcgcaagtgg 251 | | |||||| Sbjct: 958 gaggaagtgg 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 279 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 338 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 339 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 398 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 399 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 458 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 459 atgaagactggttccttcta 478 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 143 bits (72), Expect = 7e-31 Identities = 169/200 (84%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| |||||||| ||||| || | |||||||| || ||||||||||||||||||| Sbjct: 966 tcgtcactggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgtatgg 1025 Query: 72 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 131 |||||||||||||||||||||||||||| |||||||||||||| || |||||||| | Sbjct: 1026 agaagttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatctt-c 1084 Query: 132 agcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 191 || ||||||||||| ||| || || |||||| |||||||||||||||| || ||| Sbjct: 1085 aggaccgacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaa 1144 Query: 192 tccattgactttttcggtgc 211 || ||||| || |||||||| Sbjct: 1145 tctattgatttcttcggtgc 1164
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 143 bits (72), Expect = 7e-31 Identities = 199/240 (82%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 445 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 504 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 505 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 564 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||| ||| || ||| |||||| || | ||||||||||| Sbjct: 565 ggcatcttcc-gcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacacctt 623 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || || ||||| ||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 624 ccctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 438 ggtgatgctaaccaggatgcgatgaagactggttccttct 477 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 135 bits (68), Expect = 2e-28 Identities = 198/240 (82%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 840 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 899 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 900 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 959 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||| ||| || ||| |||||| || | ||||||||||| Sbjct: 960 ggcatcttcc-gcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgacacctt 1018 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 241 ||| || || ||||| || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 1019 ccctggccagtccatcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 438 ggtgatgctaaccaggatgcgatgaagactggttccttct 477 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 2716 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 2775 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctg 117 |||||||||||||||||||| |||||||| |||||||| Sbjct: 2776 tactgggctcccacccgtgaggaccgtattggtgtctg 2813
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 1088 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 1147 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctg 117 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1148 tactgggctcccacccgtgaggaccgtattggtgtctg 1185 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 169 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 228 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 229 acgacgatga 238 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 840 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 899 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 900 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 959 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 960 ggcatcttcc-gcaccgac 977 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 438 ggtgatgctaaccaggatgcgatgaagactggttccttct 477 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 123 bits (62), Expect = 6e-25 Identities = 192/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 |||||||||||||||||||| ||||| ||||| ||||| ||||| || || || || || Sbjct: 386 gtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgac 445 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 446 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 505 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||| ||| |||||| |||||| || |||||||| |||| Sbjct: 506 ggcatcttcc-gcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgcctt 564 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 235 ||| || || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 565 cccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 123 bits (62), Expect = 6e-25 Identities = 192/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 |||||||||||||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 394 gtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 453 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| || ||||| ||||| || |||||| Sbjct: 454 gggcgcatggacaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaag 513 Query: 122 ggtatcttccagcaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacctt 181 || ||||||| |||||||| ||| |||||| |||||| || |||||||| |||| Sbjct: 514 ggcatcttcc-gcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgcctt 572 Query: 182 cccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 235 ||| || || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 573 cccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 626
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 123 bits (62), Expect = 6e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 |||||||||||||||||||| || | ||||||||||| |||||||| |||||||||||| Sbjct: 929 gtcaccggtaacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggag 988 Query: 74 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 119 ||||||||||||||||||||||| || || ||||| || ||||||| Sbjct: 989 aagttctactgggctcccacccgcgaagatcgtattggagtctgca 1034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 318 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 377 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 378 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 437 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 438 ggtgatgctaac 449 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Plus Query: 174 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 233 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 234 gatgaggtgcgcaagtgg 251 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| |||||||| |||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 913 gtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaa 972 Query: 74 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtat 126 || |||||||||||||| ||| | || |||||||| ||||||||||||||||| Sbjct: 973 aaattctactgggctcctaccagggaagaccgtattggtgtctgcaagggtat 1025 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 408 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 457 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 459 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 520 ggcatcttcc-gcaccgac 537
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 406 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 465 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 466 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 525 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 526 ggcatcttcc-gcaccgac 543
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 117 bits (59), Expect = 4e-23 Identities = 120/139 (86%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 404 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgac 463 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 464 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 523 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 524 ggcatcttcc-gcaccgac 541
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| | ||||||||||| |||||||| || || || |||||||| ||||||||| Sbjct: 339 gtgcccatcattgtcaccggtaatgatttctcaacactttatgctcctctcatccgtgat 398 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 119 ||||||||||||||||||||||||||||| || | || || ||||| |||||||||| Sbjct: 399 ggtcgtatggagaagttctactgggctcctactagagaagatcgtattggtgtctgca 456 Score = 48.1 bits (24), Expect = 0.030 Identities = 75/92 (81%) Strand = Plus / Plus Query: 162 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 221 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 222 cgggtgtacgacgatgaggtgcgcaagtgggt 253 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 109 bits (55), Expect = 9e-21 Identities = 119/139 (85%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 404 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 463 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 464 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 523 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 524 ggcatcttcc-gcaccgac 541
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 109 bits (55), Expect = 9e-21 Identities = 119/139 (85%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 109 bits (55), Expect = 9e-21 Identities = 119/139 (85%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 402 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 461 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 462 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 521 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 522 ggcatcttcc-gcaccgac 539
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 109 bits (55), Expect = 9e-21 Identities = 119/139 (85%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 406 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 465 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 466 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 525 Query: 122 ggtatcttccagcaccgac 140 || ||||||| |||||||| Sbjct: 526 ggcatcttcc-gcaccgac 543
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 459 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 122 ggtatcttcc 131 || ||||||| Sbjct: 520 ggcatcttcc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 400 gtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgac 459 Query: 62 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 121 || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 460 gggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaag 519 Query: 122 ggtatcttcc 131 || ||||||| Sbjct: 520 ggcatcttcc 529
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 107 bits (54), Expect = 4e-20 Identities = 105/122 (86%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| ||||||| |||||||||||||| || || || |||||||| |||||||| ||| Sbjct: 719 cccatcatcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggt 778 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 ||||||||||| || |||||||| || || | ||||||||||||||||| ||||| ||| Sbjct: 779 cgtatggagaaattttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggt 838 Query: 125 at 126 || Sbjct: 839 at 840 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Plus Query: 169 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 228 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 229 acga 232 |||| Sbjct: 942 acga 945
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| |||| || |||||||| ||||| || | || |||||||| |||||||||||| Sbjct: 108 cccatcatcgttactggtaacgacttctctaccttgtatgctcctctcatccgtgatggt 167 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 124 ||||||||||| ||||||||||| ||||| ||||| |||||||| ||||| |||| ||| Sbjct: 168 cgtatggagaaattctactgggcacccactcgtgaggaccgtattggtgtttgcactggt 227 Query: 125 atcttc 130 |||||| Sbjct: 228 atcttc 233
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| | ||||| |||||||||||||| || || || |||||||| ||||||||| Sbjct: 906 gtgcccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgat 965 Query: 62 ggtcgtatggagaagttctactgggc 87 |||||||||||||||||||||||||| Sbjct: 966 ggtcgtatggagaagttctactgggc 991
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 |||||||||||||||||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 913 gtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatggag 972 Query: 74 aagttctactgggctcccacc 94 ||||| |||||||| |||||| Sbjct: 973 aagttttactgggcacccacc 993 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 174 gacaccttcccaggacaatccattgactttttcggtgctctg 215 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||| Sbjct: 754 tcgtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatgg 813 Query: 72 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||| ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 814 agaaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||| Sbjct: 927 tcgtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatgg 986 Query: 72 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 130 |||| ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 987 agaaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 99.6 bits (50), Expect = 9e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||||||||| |||||||| || | || ||||| || ||||||||||||||||||||| Sbjct: 38 gtcaccggtaatgatttctccaccttgtatgctccccttatccgtgatggtcgtatggag 97 Query: 74 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 119 || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 98 aaattctactgggcaccaacccgcgacgatcgtattggtgtctgca 143
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| | ||||||||||| |||||||| ||||| || |||||||| || |||||| Sbjct: 910 gtgcccatcattgtcaccggtaatgatttctcaacgctgtatgctcctctcattcgtgat 969 Query: 62 ggtcgtatggagaagttctactgggc 87 || ||||||||||||||||||||||| Sbjct: 970 gggcgtatggagaagttctactgggc 995
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 97.6 bits (49), Expect = 4e-17 Identities = 185/229 (80%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294 Query: 74 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 133 |||||||| ||||| || || | || || | || ||||| ||||||||||| || ||| Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtat-tttcag 353 Query: 134 caccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 193 |||||||| || ||| || |||| || ||||| ||||| |||||||| |||||||| Sbjct: 354 gaccgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatc 413 Query: 194 cattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 242 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 414 tattgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| |||||||||||||| || || || |||||||| |||||||| |||||||||| Sbjct: 725 tcgtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatgg 784 Query: 72 agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtat 126 |||| || |||||||| || || | ||||||||| ||||||| ||||| ||||| Sbjct: 785 agaaattttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtat 839 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Plus Query: 169 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 228 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 229 acga 232 |||| Sbjct: 941 acga 944
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 5 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 64 |||||| | ||||| |||||||| ||||| || | || || ||||| ||||||||||| Sbjct: 904 cccatcattgtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggc 963 Query: 65 cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 120 ||||||||||| ||||||||||| |||||| | || |||||||| ||||||||||| Sbjct: 964 cgtatggagaaattctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 7.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 365 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 424 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 425 ccaggcagctctgggtgatgctaa 448 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 147 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 206 Query: 72 agaagttctactgggc 87 |||||||||||||||| Sbjct: 207 agaagttctactgggc 222 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 162 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 211 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 12 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 71 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 907 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 966 Query: 72 agaagttctactgggc 87 |||||||||||||||| Sbjct: 967 agaagttctactgggc 982
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || || ||||| || || |||||||| || || |||||||||| | Sbjct: 1748 ggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggagaagtac 1807 Query: 80 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 133 |||||| ||||||||||| ||||| ||||| ||||||| ||| ||||||||| Sbjct: 1808 tactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 gagcaggacaatgtcaagcgtgtgcagct 406 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949 Query: 74 aagttctactgggc 87 |||||||||||||| Sbjct: 950 aagttctactgggc 963
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 2 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 61 ||||||||| ||||||| || ||||||||||| | || || ||||| || ||||| ||| Sbjct: 331 gtgcccatcatcgtcacaggaaacgatttctcagcactatatgctccccttatccgcgat 390 Query: 62 ggtcgtatggagaagttctactgggctcc 90 ||||||||||| ||||||||||||||||| Sbjct: 391 ggtcgtatggaaaagttctactgggctcc 419
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 8e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 345 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 404 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 405 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 460 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| |||||||||||||| || | || || ||||| ||||||||||||||||||||| Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985 Query: 74 aagttctactgggc 87 || ||||||||||| Sbjct: 986 aaattctactgggc 999 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 162 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 215 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 879 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 938 Query: 74 aagttctactgggc 87 |||||||| ||||| Sbjct: 939 aagttctattgggc 952
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 67.9 bits (34), Expect = 3e-08 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||||||||| || | |||| |||||| |||| |||||| ||||||||||||||| Sbjct: 919 ggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagttc 978 Query: 80 t--actgggctcccacccgtgacgaccgtatcggtgtctg 117 | ||||| || |||||||| ||||||||||||||||| Sbjct: 979 ttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 174 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 233 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 234 ga 235 || Sbjct: 2722 ga 2723
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 174 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 233 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 234 ga 235 || Sbjct: 1032 ga 1033
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 20 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 79 |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| || ||| Sbjct: 930 ggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattc 989 Query: 80 tactgggctcccacccgtgacgaccgtat 108 ||||||||||| || ||||| || ||||| Sbjct: 990 tactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 171 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 230 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 231 gacgatgaggtgcgcaagtggg 252 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 933 aagttctactgg 944
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 14 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 73 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 74 aagttctactgg 85 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 51 tgatccgtgatggtcgtatggagaagttctactgg 85 |||| |||||||| ||||||||||||||||||||| Sbjct: 644 tgattcgtgatgggcgtatggagaagttctactgg 678
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 23 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 82 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 83 tgg 85 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 44 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 87 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 44 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 87 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 56 cgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 102 |||||||| |||||||| || ||||||||||| || || |||||||| Sbjct: 6938 cgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 agccaggcagctctgggtgatg 444 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 caagatcgtcgacaccttccc 184 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 1.8 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 14 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 72 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 73 gaagttctactgg 85 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 acccaccatctcttgctgcat 522 ||||||||||||||||||||| Sbjct: 63550 acccaccatctcttgctgcat 63530
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ggtgtctgcaagggtatcttccag 133 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 262062 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tgcataggaggaggtaaagg 537 |||||||||||||||||||| Sbjct: 46378 tgcataggaggaggtaaagg 46359
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18, and complete cds Length = 16432 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tgcataggaggaggtaaagg 537 |||||||||||||||||||| Sbjct: 1656 tgcataggaggaggtaaagg 1637
>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence Length = 202128 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tgcataggaggaggtaaagg 537 |||||||||||||||||||| Sbjct: 32964 tgcataggaggaggtaaagg 32945
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 agcgtgtgcagcttgctgac 413 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 agtgacgagtctgtcgtcaa 166 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 caggagcaggacaatgtcaa 394 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 176974 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tgcataggaggaggtaaagg 537 |||||||||||||||||||| Sbjct: 34681 tgcataggaggaggtaaagg 34662
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgtgacgaccgtatcggtgt 114 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 caggagcaggacaatgtcaa 394 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgagccaggcagctctgggtgatg 444 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence Length = 158595 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tgcataggaggaggtaaagg 537 |||||||||||||||||||| Sbjct: 27736 tgcataggaggaggtaaagg 27755 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,182,643 Number of Sequences: 3902068 Number of extensions: 3182643 Number of successful extensions: 56721 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56395 Number of HSP's gapped (non-prelim): 282 length of query: 539 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 516 effective length of database: 17,143,297,704 effective search space: 8845941615264 effective search space used: 8845941615264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
