>IF2_STRMU (Q8DVP9) Translation initiation factor IF-2|
          Length = 916

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +2

Query: 200 RHADLRDGSLRAVHQQRVQRSAFRIRPGSARIVAVRDVRSEGEAEVDEDHVPGRAQDQGW 379
           + A  ++GS+ A  +    + A R RP +    A R+ R++ EAE  +++   R Q++G 
Sbjct: 67  KEAKAQEGSVAAEPKAAATKPAGRPRPQNRNFKAEREARAKAEAERRQNNGERRNQNKGQ 126

Query: 380 ARHRDD 397
              + D
Sbjct: 127 NNRQKD 132

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -2

Query: 353 GRDLHPLRPLLQSEHPEQRRSLQSPVGSGRQIVGRVADEQPVETHPEDQH 204
           G   HP RP   + HP+Q   LQ P              Q ++ HP  QH
Sbjct: 390 GLPQHPQRPQHPAPHPQQHSQLQPPHSQ------HPPPHQHIQHHPNHQH 433

>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +2

Query: 230 RAVHQQRVQRSAFRIRPGSARIVAVRDVRSEGEAEVDEDHVPGRAQDQGWARHRDDPAGE 409
           R + Q + + S+    P     V V    +  E + D++  PG  +D   A HR D  GE
Sbjct: 667 RVLPQTKAESSSDEEEPAELPAVTVTPAPAP-EDKGDQEEDPGCQEDVDEAEHRGDMTGE 725

Query: 410 DVRAEQDGE 436
           +   E + E
Sbjct: 726 EGERETEAE 734


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,091,986
Number of Sequences: 219361
Number of extensions: 1507825
Number of successful extensions: 5123
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5121
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)