Clone Information

BLAST Search Result

Clone Name	baald20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_185970.1\| Oryza sativa (japonica cultivar-group), mRNA	347	3e-92
2	gb\|AY108992.1\| Zea mays PCO062765 mRNA sequence	214	2e-52
3	ref\|XM_479396.1\| Oryza sativa (japonica cultivar-group), mRNA	192	9e-46
4	dbj\|AK060061.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	192	9e-46
5	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	188	1e-44
6	dbj\|AP005184.5\| Oryza sativa (japonica cultivar-group) genomic D...	188	1e-44
7	dbj\|AP005182.5\| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
8	ref\|NM_121375.3\| Arabidopsis thaliana unknown protein AT5G13720 ...	70	9e-09
9	ref\|NM_121376.2\| Arabidopsis thaliana SIGD (SIGMA-LIKE FACTOR 4)...	70	9e-09
10	gb\|AY150387.1\| Arabidopsis thaliana unknown protein (At5g13720) ...	70	9e-09
11	gb\|AY096494.1\| Arabidopsis thaliana unknown protein (At5g13720) ...	70	9e-09
12	dbj\|AB021119.1\| Arabidopsis thaliana sigD gene for RNA polymeras...	70	9e-09
13	dbj\|AB006704.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	70	9e-09
14	gb\|AY110425.1\| Zea mays CL28396_2 mRNA sequence	70	9e-09
15	gb\|AC025905.3\| Oryza sativa (japonica cultivar-group) chromosome...	46	0.13
16	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.13
17	emb\|CT030723.18\| Mouse DNA sequence from clone RP23-33L24 on chr...	46	0.13
18	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	46	0.13
19	gb\|AC133874.10\| Mus musculus chromosome 19, clone RP23-81N16, co...	42	2.1
20	gb\|AC126544.5\| Homo sapiens chromosome 17, clone RP11-707O23, co...	42	2.1
21	dbj\|AK091529.1\| Homo sapiens cDNA FLJ34210 fis, clone FCBBF3021026	42	2.1
22	dbj\|D21071.2\| Rana catesbeiana mRNA for bullfrog skeletal muscle...	42	2.1
23	gb\|AC004703.1\|AC004703 Homo sapiens chromosome 17, clone hRPC.11...	42	2.1
24	gb\|AC120416.11\| Mus musculus chromosome 1, clone RP24-472N18, co...	40	8.1
25	gb\|AE017350.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	8.1
26	ref\|XM_603414.2\| PREDICTED: Bos taurus similar to mitochondrial ...	40	8.1
27	ref\|XM_955005.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.1
28	ref\|XM_325692.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.1
29	ref\|XM_567554.1\| Cryptococcus neoformans var. neoformans JEC21 h...	40	8.1
30	gb\|AC108527.6\| Rattus norvegicus 9 BAC CH230-7F11 (Children's Ho...	40	8.1
31	emb\|AL939125.1\|SCO939125 Streptomyces coelicolor A3(2) complete ...	40	8.1
32	emb\|AL939105.1\|SCO939105 Streptomyces coelicolor A3(2) complete ...	40	8.1
33	gb\|CP000254.1\| Methanospirillum hungatei JF-1, complete genome	40	8.1
34	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	8.1
35	emb\|BX296515.11\| Pig DNA sequence from clone PigE-121D21, comple...	40	8.1
36	gb\|BT024054.1\| Zea mays clone EL01N0439D05 mRNA sequence	40	8.1
37	gb\|AC113456.9\| Mus musculus chromosome 1, clone RP23-257E16, com...	40	8.1
38	emb\|AL606902.26\| Mouse DNA sequence from clone RP23-167A12 on ch...	40	8.1
39	emb\|AL645530.11\| Mouse DNA sequence from clone RP23-92N10 on chr...	40	8.1
40	emb\|AL645484.14\| Mouse DNA sequence from clone RP23-38A10 on chr...	40	8.1

>ref|NM_185970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score =  347 bits (175), Expect = 3e-92
 Identities = 461/555 (83%), Gaps = 1/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   atcttcgacttccggttcctggctcttctcgccgtcgccggnatcgctggcgggctccct 64
           |||||||| ||| | ||||||||||||||||| || ||||| ||| ||||| || |||||
Sbjct: 307 atcttcgatttcagattcctggctcttctcgcggttgccgg-atcactggccggatccct 365

                                                                       
Query: 65  cctctgcttcctcaacggatgtgtgtacataaaagaggcctattgtgtctactggacgag 124
           ||||||||||||||| || ||||| |||||||||||||| ||  | || || ||| || |
Sbjct: 366 cctctgcttcctcaatggttgtgtttacataaaagaggcttacagcgtgtattggtcggg 425

                                                                       
Query: 125 ctgcgccaaaggtgtccatacagggcagatggtcctcaaggtcgtcgaggccattgatgt 184
           |||   |||||| |||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 426 ctgtctcaaaggcgtccatacagggcagatggtcctcaaagttgtcgaagccattgatgt 485

                                                                       
Query: 185 gtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttcatcag 244
            ||||| ||||| || |||||||||||||| ||||||||  | |||||||||||||||||
Sbjct: 486 ttatctcgctggaacagtcatgctgatctttgggatgggcttgtacgggctgttcatcag 545

                                                                       
Query: 245 caacgcgtccaacgatctgccttccggatccgaccgggctctgcaaggatcgtcgctgtt 304
           |||  | || |  ||| | ||||| |  || ||| | |||||||| ||||| ||  | ||
Sbjct: 546 caatacttctactgatgttccttctgagtctgacagagctctgcagggatcatccttatt 605

                                                                       
Query: 305 cgggatgttcgctctgaaggagaggccgaagtggatgaagatcacgtccctggacgagct 364
            |||||||| ||| | ||||| || || |||||||||||||| || ||||||||||| ||
Sbjct: 606 tgggatgtttgctttaaaggaaagaccaaagtggatgaagattacctccctggacgaact 665

                                                                       
Query: 365 caagaccaaggttgggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggag 424
            || ||||| || ||||| |||||||| |||||||| |||||||||||||||||| ||||
Sbjct: 666 gaaaaccaaagtagggcatgtcatcgtcatgatccttctggtgaagatgttcgagaggag 725

                                                                       
Query: 425 caagatggtgaagatcaccacggggctggacctgctcagctactcggtctgcatcttcct 484
           ||| ||||||||||| || |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 726 caaaatggtgaagataacaacggggttggacctgctgagctactcggtctgcatcttcct 785

                                                                       
Query: 485 ctcctcggcctccctctacatcctgcataacctccaccggcccgagcacgaggagtcggt 544
            || || || || || ||||||||||| ||||| ||| |||| || || || || |||||
Sbjct: 786 gtcgtccgcttcactgtacatcctgcacaaccttcacaggcctgaacaggatgactcggt 845

                          
Query: 545 gatgccccacttgta 559
            |||||  |||||||
Sbjct: 846 tatgccaaacttgta 860

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>gb|AY108992.1| Zea mays PCO062765 mRNA sequence
          Length = 499

 Score =  214 bits (108), Expect = 2e-52
 Identities = 249/296 (84%)
 Strand = Plus / Plus

                                                                       
Query: 216 gggatgggtctctacgggctgttcatcagcaacgcgtccaacgatctgccttccggatcc 275
           ||||||||||||||||| || ||||||||||||||  ||  || | | ||| | | ||||
Sbjct: 12  gggatgggtctctacggcctcttcatcagcaacgctcccgccggtgttcctcctgaatcc 71

                                                                       
Query: 276 gaccgggctctgcaaggatcgtcgctgttcgggatgttcgctctgaaggagaggccgaag 335
           ||||| || ||    || |||||| ||||||||||||||||| |||||||  | ||||||
Sbjct: 72  gaccgtgccctcagcggctcgtcgttgttcgggatgttcgctttgaaggaacgcccgaag 131

                                                                       
Query: 336 tggatgaagatcacgtccctggacgagctcaagaccaaggttgggcacgtcatcgtgatg 395
           |||||||| ||||| || || |||||||||||||| || || ||||||||||||||||||
Sbjct: 132 tggatgaacatcacctcgcttgacgagctcaagacaaaagtggggcacgtcatcgtgatg 191

                                                                       
Query: 396 atcctgctggtgaagatgttcgagcggagcaagatggtgaagatcaccacggggctggac 455
           || || || |||||||||||||||  |||||||||||||| |||  ||||||||||||||
Sbjct: 192 attctacttgtgaagatgttcgagaagagcaagatggtgacgatagccacggggctggac 251

                                                                   
Query: 456 ctgctcagctactcggtctgcatcttcctctcctcggcctccctctacatcctgca 511
           || |||||||||||| ||||||||||| | || || || || ||||||||||||||
Sbjct: 252 ctcctcagctactcgatctgcatcttcttgtcgtcagcttctctctacatcctgca 307

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>ref|XM_479396.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1073

 Score =  192 bits (97), Expect = 9e-46
 Identities = 169/193 (87%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggctccctcctctgcttcctcaacggatgtgtgtacataaaagaggcctattgtgtctac 116
           ||||||||||||||||||||||  || ||||||||||| ||||| || ||   |||||||
Sbjct: 386 ggctccctcctctgcttcctcagtggttgtgtgtacattaaagaagcataccatgtctac 445

                                                                       
Query: 117 tggacgagctgcgccaaaggtgtccatacagggcagatggtcctcaaggtcgtcgaggcc 176
           ||||| ||||| |  | ||||||||||||||||||||||||||||| | |||||||||| 
Sbjct: 446 tggacaagctgtgttagaggtgtccatacagggcagatggtcctcaggctcgtcgaggct 505

                                                                       
Query: 177 attgatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctg 236
           || ||||||||||||||||| || ||||||||||| || ||||||||||| || ||||||
Sbjct: 506 atcgatgtgtatcttgctggaacagtcatgctgatttttgggatgggtctgtatgggctg 565

                        
Query: 237 ttcatcagcaacg 249
           |||||||||||||
Sbjct: 566 ttcatcagcaacg 578



 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 309 atgttcgctctgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaag 368
           ||||| ||| |||||||||| |||| ||||||||  ||||  || || || |||||||| 
Sbjct: 635 atgtttgctttgaaggagagaccgaggtggatgagaatcagctctctcgatgagctcaaa 694

                                                                       
Query: 369 accaaggttgggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaag 428
           || ||| | || ||| ||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 695 acgaagctgggccacatcatcgtgatgattctcctggtgaagatgttcgagaggagcaag 754

                                                                       
Query: 429 atggtgaagatcaccacggggctggacctgctcagctactcggtctgcatcttcctctcc 488
           |||||| | |||||||||||  ||||||||||||||||| |||||||||||||| | || 
Sbjct: 755 atggtgcacatcaccacgggaatggacctgctcagctacgcggtctgcatcttcttgtcg 814

                                        
Query: 489 tcggcctccctctacatcctgcataacct 517
           ||||| ||||| ||||||||||| |||||
Sbjct: 815 tcggcttccctgtacatcctgcacaacct 843



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 8   ttcgacttccggttcctggctcttctcgccgtcgccgg 45
           ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 350 ttcgatttccgtttcctggctctcctcgccgtcgccgg 387

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>dbj|AK060061.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F12, full
           insert sequence
          Length = 1073

 Score =  192 bits (97), Expect = 9e-46
 Identities = 169/193 (87%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggctccctcctctgcttcctcaacggatgtgtgtacataaaagaggcctattgtgtctac 116
           ||||||||||||||||||||||  || ||||||||||| ||||| || ||   |||||||
Sbjct: 386 ggctccctcctctgcttcctcagtggttgtgtgtacattaaagaagcataccatgtctac 445

                                                                       
Query: 117 tggacgagctgcgccaaaggtgtccatacagggcagatggtcctcaaggtcgtcgaggcc 176
           ||||| ||||| |  | ||||||||||||||||||||||||||||| | |||||||||| 
Sbjct: 446 tggacaagctgtgttagaggtgtccatacagggcagatggtcctcaggctcgtcgaggct 505

                                                                       
Query: 177 attgatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctg 236
           || ||||||||||||||||| || ||||||||||| || ||||||||||| || ||||||
Sbjct: 506 atcgatgtgtatcttgctggaacagtcatgctgatttttgggatgggtctgtatgggctg 565

                        
Query: 237 ttcatcagcaacg 249
           |||||||||||||
Sbjct: 566 ttcatcagcaacg 578



 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 309 atgttcgctctgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaag 368
           ||||| ||| |||||||||| |||| ||||||||  ||||  || || || |||||||| 
Sbjct: 635 atgtttgctttgaaggagagaccgaggtggatgagaatcagctctctcgatgagctcaaa 694

                                                                       
Query: 369 accaaggttgggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaag 428
           || ||| | || ||| ||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 695 acgaagctgggccacatcatcgtgatgattctcctggtgaagatgttcgagaggagcaag 754

                                                                       
Query: 429 atggtgaagatcaccacggggctggacctgctcagctactcggtctgcatcttcctctcc 488
           |||||| | |||||||||||  ||||||||||||||||| |||||||||||||| | || 
Sbjct: 755 atggtgcacatcaccacgggaatggacctgctcagctacgcggtctgcatcttcttgtcg 814

                                        
Query: 489 tcggcctccctctacatcctgcataacct 517
           ||||| ||||| ||||||||||| |||||
Sbjct: 815 tcggcttccctgtacatcctgcacaacct 843



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 8   ttcgacttccggttcctggctcttctcgccgtcgccgg 45
           ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 350 ttcgatttccgtttcctggctctcctcgccgtcgccgg 387

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 1e-44
 Identities = 194/227 (85%)
 Strand = Plus / Plus

                                                                            
Query: 333      aagtggatgaagatcacgtccctggacgagctcaagaccaaggttgggcacgtcatcgtg 392
                |||||||||||||| || ||||||||||| || || ||||| || ||||| |||||||| 
Sbjct: 27579251 aagtggatgaagattacctccctggacgaactgaaaaccaaagtagggcatgtcatcgtc 27579310

                                                                            
Query: 393      atgatcctgctggtgaagatgttcgagcggagcaagatggtgaagatcaccacggggctg 452
                |||||||| |||||||||||||||||| ||||||| ||||||||||| || |||||| ||
Sbjct: 27579311 atgatccttctggtgaagatgttcgagaggagcaaaatggtgaagataacaacggggttg 27579370

                                                                            
Query: 453      gacctgctcagctactcggtctgcatcttcctctcctcggcctccctctacatcctgcat 512
                |||||||| ||||||||||||||||||||||| || || || || || ||||||||||| 
Sbjct: 27579371 gacctgctgagctactcggtctgcatcttcctgtcgtccgcttcactgtacatcctgcac 27579430

                                                               
Query: 513      aacctccaccggcccgagcacgaggagtcggtgatgccccacttgta 559
                ||||| ||| |||| || || || || ||||| |||||  |||||||
Sbjct: 27579431 aaccttcacaggcctgaacaggatgactcggttatgccaaacttgta 27579477



 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                            
Query: 322      aggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttgggc 381
                ||||||| |||| ||||||||  ||||  || || || |||||||| || ||| | || |
Sbjct: 27575946 aggagagaccgaggtggatgagaatcagctctctcgatgagctcaaaacgaagctgggcc 27576005

                                                                            
Query: 382      acgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggtgaagatca 441
                || ||||||||||||| || |||||||||||||||||| |||||||||||||| | ||||
Sbjct: 27576006 acatcatcgtgatgattctcctggtgaagatgttcgagaggagcaagatggtgcacatca 27576065

                                                                            
Query: 442      ccacggggctggacctgctcagctactcggtctgcatcttcctctcctcggcctccctct 501
                |||||||  ||||||||||||||||| |||||||||||||| | || ||||| ||||| |
Sbjct: 27576066 ccacgggaatggacctgctcagctacgcggtctgcatcttcttgtcgtcggcttccctgt 27576125

                                
Query: 502      acatcctgcataacct 517
                |||||||||| |||||
Sbjct: 27576126 acatcctgcacaacct 27576141



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 180      gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
                ||||||||||||||||| || ||||||||||| || ||||||||||| || |||||||||
Sbjct: 27575642 gatgtgtatcttgctggaacagtcatgctgatttttgggatgggtctgtatgggctgttc 27575701

                          
Query: 240      atcagcaacg 249
                ||||||||||
Sbjct: 27575702 atcagcaacg 27575711



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                            
Query: 84       tgtgtgtacataaaagaggcctattgtgtctactggacgagctgcgccaaaggtgtccat 143
                ||||||||||| ||||| || ||   |||||||||||| ||||| |  | ||||||||||
Sbjct: 27575364 tgtgtgtacattaaagaagcataccatgtctactggacaagctgtgttagaggtgtccat 27575423

                                                
Query: 144      acagggcagatggtcctcaaggtcgtcgaggc 175
                ||||||||||||||||||| | ||||||||||
Sbjct: 27575424 acagggcagatggtcctcaggctcgtcgaggc 27575455



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 180      gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
                ||||| ||||| ||||| || |||||||||||||| ||||||||  | ||||||||||||
Sbjct: 27578676 gatgtttatctcgctggaacagtcatgctgatctttgggatgggcttgtacgggctgttc 27578735

                        
Query: 240      atcagcaa 247
                ||||||||
Sbjct: 27578736 atcagcaa 27578743



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                            
Query: 5        atcttcgacttccggttcctggctcttctcgccgtcgccggnatcgctggcgggctccct 64
                |||||||| ||| | ||||||||||||||||| || ||||| ||| ||||| || |||||
Sbjct: 27577656 atcttcgatttcagattcctggctcttctcgcggttgccgg-atcactggccggatccct 27577714

                               
Query: 65       cctctgcttcctcaa 79
                |||||||||||||||
Sbjct: 27577715 cctctgcttcctcaa 27577729



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 131      caaaggtgtccatacagggcagatggtcctcaaggtcgtcgaggccattg 180
                |||||| |||||||||||||||||||||||||| || ||||| |||||||
Sbjct: 27577950 caaaggcgtccatacagggcagatggtcctcaaagttgtcgaagccattg 27577999



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 8        ttcgacttccggttcctggctcttctcgccgtcgccgg 45
                ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 27575208 ttcgatttccgtttcctggctctcctcgccgtcgccgg 27575245



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 57       ggctccctcctctgcttcctca 78
                ||||||||||||||||||||||
Sbjct: 27575244 ggctccctcctctgcttcctca 27575265

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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score =  188 bits (95), Expect = 1e-44
 Identities = 194/227 (85%)
 Strand = Plus / Plus

                                                                         
Query: 333   aagtggatgaagatcacgtccctggacgagctcaagaccaaggttgggcacgtcatcgtg 392
             |||||||||||||| || ||||||||||| || || ||||| || ||||| |||||||| 
Sbjct: 36244 aagtggatgaagattacctccctggacgaactgaaaaccaaagtagggcatgtcatcgtc 36303

                                                                         
Query: 393   atgatcctgctggtgaagatgttcgagcggagcaagatggtgaagatcaccacggggctg 452
             |||||||| |||||||||||||||||| ||||||| ||||||||||| || |||||| ||
Sbjct: 36304 atgatccttctggtgaagatgttcgagaggagcaaaatggtgaagataacaacggggttg 36363

                                                                         
Query: 453   gacctgctcagctactcggtctgcatcttcctctcctcggcctccctctacatcctgcat 512
             |||||||| ||||||||||||||||||||||| || || || || || ||||||||||| 
Sbjct: 36364 gacctgctgagctactcggtctgcatcttcctgtcgtccgcttcactgtacatcctgcac 36423

                                                            
Query: 513   aacctccaccggcccgagcacgaggagtcggtgatgccccacttgta 559
             ||||| ||| |||| || || || || ||||| |||||  |||||||
Sbjct: 36424 aaccttcacaggcctgaacaggatgactcggttatgccaaacttgta 36470



 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                         
Query: 322   aggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttgggc 381
             ||||||| |||| ||||||||  ||||  || || || |||||||| || ||| | || |
Sbjct: 32939 aggagagaccgaggtggatgagaatcagctctctcgatgagctcaaaacgaagctgggcc 32998

                                                                         
Query: 382   acgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggtgaagatca 441
             || ||||||||||||| || |||||||||||||||||| |||||||||||||| | ||||
Sbjct: 32999 acatcatcgtgatgattctcctggtgaagatgttcgagaggagcaagatggtgcacatca 33058

                                                                         
Query: 442   ccacggggctggacctgctcagctactcggtctgcatcttcctctcctcggcctccctct 501
             |||||||  ||||||||||||||||| |||||||||||||| | || ||||| ||||| |
Sbjct: 33059 ccacgggaatggacctgctcagctacgcggtctgcatcttcttgtcgtcggcttccctgt 33118

                             
Query: 502   acatcctgcataacct 517
             |||||||||| |||||
Sbjct: 33119 acatcctgcacaacct 33134



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 180   gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
             ||||||||||||||||| || ||||||||||| || ||||||||||| || |||||||||
Sbjct: 32635 gatgtgtatcttgctggaacagtcatgctgatttttgggatgggtctgtatgggctgttc 32694

                       
Query: 240   atcagcaacg 249
             ||||||||||
Sbjct: 32695 atcagcaacg 32704



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                         
Query: 84    tgtgtgtacataaaagaggcctattgtgtctactggacgagctgcgccaaaggtgtccat 143
             ||||||||||| ||||| || ||   |||||||||||| ||||| |  | ||||||||||
Sbjct: 32357 tgtgtgtacattaaagaagcataccatgtctactggacaagctgtgttagaggtgtccat 32416

                                             
Query: 144   acagggcagatggtcctcaaggtcgtcgaggc 175
             ||||||||||||||||||| | ||||||||||
Sbjct: 32417 acagggcagatggtcctcaggctcgtcgaggc 32448



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 180   gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
             ||||| ||||| ||||| || |||||||||||||| ||||||||  | ||||||||||||
Sbjct: 35669 gatgtttatctcgctggaacagtcatgctgatctttgggatgggcttgtacgggctgttc 35728

                     
Query: 240   atcagcaa 247
             ||||||||
Sbjct: 35729 atcagcaa 35736



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 5     atcttcgacttccggttcctggctcttctcgccgtcgccggnatcgctggcgggctccct 64
             |||||||| ||| | ||||||||||||||||| || ||||| ||| ||||| || |||||
Sbjct: 34649 atcttcgatttcagattcctggctcttctcgcggttgccgg-atcactggccggatccct 34707

                            
Query: 65    cctctgcttcctcaa 79
             |||||||||||||||
Sbjct: 34708 cctctgcttcctcaa 34722



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 131   caaaggtgtccatacagggcagatggtcctcaaggtcgtcgaggccattg 180
             |||||| |||||||||||||||||||||||||| || ||||| |||||||
Sbjct: 34943 caaaggcgtccatacagggcagatggtcctcaaagttgtcgaagccattg 34992



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 8     ttcgacttccggttcctggctcttctcgccgtcgccgg 45
             ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 32201 ttcgatttccgtttcctggctctcctcgccgtcgccgg 32238



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 57    ggctccctcctctgcttcctca 78
             ||||||||||||||||||||||
Sbjct: 32237 ggctccctcctctgcttcctca 32258

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>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0018C07
          Length = 141707

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                          
Query: 322    aggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttgggc 381
              ||||||| |||| ||||||||  ||||  || || || |||||||| || ||| | || |
Sbjct: 139917 aggagagaccgaggtggatgagaatcagctctctcgatgagctcaaaacgaagctgggcc 139976

                                                                          
Query: 382    acgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggtgaagatca 441
              || ||||||||||||| || |||||||||||||||||| |||||||||||||| | ||||
Sbjct: 139977 acatcatcgtgatgattctcctggtgaagatgttcgagaggagcaagatggtgcacatca 140036

                                                                          
Query: 442    ccacggggctggacctgctcagctactcggtctgcatcttcctctcctcggcctccctct 501
              |||||||  ||||||||||||||||| |||||||||||||| | || ||||| ||||| |
Sbjct: 140037 ccacgggaatggacctgctcagctacgcggtctgcatcttcttgtcgtcggcttccctgt 140096

                              
Query: 502    acatcctgcataacct 517
              |||||||||| |||||
Sbjct: 140097 acatcctgcacaacct 140112



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                          
Query: 180    gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
              ||||||||||||||||| || ||||||||||| || ||||||||||| || |||||||||
Sbjct: 139613 gatgtgtatcttgctggaacagtcatgctgatttttgggatgggtctgtatgggctgttc 139672

                        
Query: 240    atcagcaacg 249
              ||||||||||
Sbjct: 139673 atcagcaacg 139682



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                          
Query: 84     tgtgtgtacataaaagaggcctattgtgtctactggacgagctgcgccaaaggtgtccat 143
              ||||||||||| ||||| || ||   |||||||||||| ||||| |  | ||||||||||
Sbjct: 139335 tgtgtgtacattaaagaagcataccatgtctactggacaagctgtgttagaggtgtccat 139394

                                              
Query: 144    acagggcagatggtcctcaaggtcgtcgaggc 175
              ||||||||||||||||||| | ||||||||||
Sbjct: 139395 acagggcagatggtcctcaggctcgtcgaggc 139426



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                          
Query: 5      atcttcgacttccggttcctggctcttctcgccgtcgccggnatcgctggcgggctccct 64
              |||||||| ||| | ||||||||||||||||| || ||||| ||| ||||| || |||||
Sbjct: 141627 atcttcgatttcagattcctggctcttctcgcggttgccgg-atcactggccggatccct 141685

                             
Query: 65     cctctgcttcctcaa 79
              |||||||||||||||
Sbjct: 141686 cctctgcttcctcaa 141700



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 8      ttcgacttccggttcctggctcttctcgccgtcgccgg 45
              ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 139179 ttcgatttccgtttcctggctctcctcgccgtcgccgg 139216



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 57     ggctccctcctctgcttcctca 78
              ||||||||||||||||||||||
Sbjct: 139215 ggctccctcctctgcttcctca 139236

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>ref|NM_121375.3| Arabidopsis thaliana unknown protein AT5G13720 mRNA, complete cds
          Length = 1012

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                       
Query: 319 tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
           |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 691 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 750

                                                                  
Query: 379 ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
           | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 751 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 805

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>ref|NM_121376.2| Arabidopsis thaliana SIGD (SIGMA-LIKE FACTOR 4); DNA binding /
            DNA-directed RNA polymerase/ transcription factor
            AT5G13730 (SIGD) mRNA, complete cds
          Length = 1785

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                        
Query: 319  tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
            |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 1670 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 1611

                                                                   
Query: 379  ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
            | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 1610 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 1556

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>gb|AY150387.1| Arabidopsis thaliana unknown protein (At5g13720) mRNA, complete cds
          Length = 820

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                       
Query: 319 tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
           |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 572 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 631

                                                                  
Query: 379 ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
           | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 632 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 686

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>gb|AY096494.1| Arabidopsis thaliana unknown protein (At5g13720) mRNA, complete cds
          Length = 974

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                       
Query: 319 tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
           |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 691 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 750

                                                                  
Query: 379 ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
           | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 751 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 805

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>dbj|AB021119.1| Arabidopsis thaliana sigD gene for RNA polymerase sigma subunit SigD
            and spliced variant SigD*, complete cds
          Length = 2975

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                        
Query: 319  tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
            |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 2451 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 2392

                                                                   
Query: 379  ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
            | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 2391 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 2337

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>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12
          Length = 79259

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                         
Query: 319   tgaaggagaggccgaagtggatgaagatcacgtccctggacgagctcaagaccaaggttg 378
             |||||||||| || || |||||||||||||  || || || ||||| || ||||| || |
Sbjct: 72018 tgaaggagagaccaaaatggatgaagatcagctcacttgatgagcttaaaaccaaagtgg 72077

                                                                    
Query: 379   ggcacgtcatcgtgatgatcctgctggtgaagatgttcgagcggagcaagatggt 433
             | || ||||| || ||||| ||||| ||||||||||||||| | |||||||||||
Sbjct: 72078 gacatgtcattgttatgattctgctagtgaagatgttcgagagaagcaagatggt 72132

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>gb|AY110425.1| Zea mays CL28396_2 mRNA sequence
          Length = 1071

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 180 gatgtgtatcttgctggcaccgtcatgctgatcttcgggatgggtctctacgggctgttc 239
           ||||||||||||||||  || |||||| |||| || ||||||||||||||||| || |||
Sbjct: 179 gatgtgtatcttgctgaaacggtcatgttgatatttgggatgggtctctacggtctcttc 238

                      
Query: 240 atcagcaacgc 250
            ||||||||||
Sbjct: 239 gtcagcaacgc 249

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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 42/47 (89%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                            
Query: 201   gtcatgctgatcttcgggatgggtctctacgggctgttcatcagcaa 247
             ||||||||||| || ||||||||| | |||||| |||||||||||||
Sbjct: 15595 gtcatgctgatttt-gggatgggtatgtacgggttgttcatcagcaa 15640

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 42/47 (89%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                               
Query: 201      gtcatgctgatcttcgggatgggtctctacgggctgttcatcagcaa 247
                ||||||||||| || ||||||||| | |||||| |||||||||||||
Sbjct: 16136706 gtcatgctgatttt-gggatgggtatgtacgggttgttcatcagcaa 16136751

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>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete
              sequence
          Length = 241451

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 11     gacttccggttcctggctcttct 33
              |||||||||||||||||||||||
Sbjct: 175932 gacttccggttcctggctcttct 175910

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 42/47 (89%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                               
Query: 201      gtcatgctgatcttcgggatgggtctctacgggctgttcatcagcaa 247
                ||||||||||| || ||||||||| | |||||| |||||||||||||
Sbjct: 16144947 gtcatgctgatttt-gggatgggtatgtacgggttgttcatcagcaa 16144992

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>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence
          Length = 215113

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 476    catcttcctctcctcggcctccctc 500
              |||||||||||||||| ||||||||
Sbjct: 178239 catcttcctctcctcgacctccctc 178263

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>gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, complete sequence
          Length = 172940

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ggctccctcctctgcttcctc 77
             |||||||||||||||||||||
Sbjct: 91615 ggctccctcctctgcttcctc 91635

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>dbj|AK091529.1| Homo sapiens cDNA FLJ34210 fis, clone FCBBF3021026
          Length = 2546

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   ggctccctcctctgcttcctc 77
            |||||||||||||||||||||
Sbjct: 1044 ggctccctcctctgcttcctc 1064

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>dbj|D21071.2| Rana catesbeiana mRNA for bullfrog skeletal muscle calcium release
             channel (ryanodine receptor) beta isoform(RyR3), complete
             cds
          Length = 16010

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ggctccctcctctgcttcctc 77
             |||||||||||||||||||||
Sbjct: 13410 ggctccctcctctgcttcctc 13390

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>gb|AC004703.1|AC004703 Homo sapiens chromosome 17, clone hRPC.1164_O_3, complete sequence
          Length = 104147

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ggctccctcctctgcttcctc 77
             |||||||||||||||||||||
Sbjct: 63199 ggctccctcctctgcttcctc 63179

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>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence
          Length = 199727

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 476   catcttcctctcctcggcctccct 499
             |||||||||| |||||||||||||
Sbjct: 22300 catcttcctcccctcggcctccct 22277

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>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
              sequence
          Length = 1085720

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    ggagaggccgaagtggatga 342
              ||||||||||||||||||||
Sbjct: 764039 ggagaggccgaagtggatga 764020

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>ref|XM_603414.2| PREDICTED: Bos taurus similar to mitochondrial protein 18 kDa
           isoform a (LOC525071), mRNA
          Length = 1123

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 490 cggcctccctctacatcctg 509
           ||||||||||||||||||||
Sbjct: 401 cggcctccctctacatcctg 420

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>ref|XM_955005.1| Neurospora crassa OR74A hypothetical protein (NCU05838.1) partial
            mRNA
          Length = 1254

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 478  tcttcctctcctcggcctcc 497
            ||||||||||||||||||||
Sbjct: 1012 tcttcctctcctcggcctcc 993

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>ref|XM_325692.1| Neurospora crassa OR74A hypothetical protein (NCU05838.1) partial
            mRNA
          Length = 1254

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 478  tcttcctctcctcggcctcc 497
            ||||||||||||||||||||
Sbjct: 1012 tcttcctctcctcggcctcc 993

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>ref|XM_567554.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNJ02640) partial mRNA
          Length = 809

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 ggagaggccgaagtggatga 342
           ||||||||||||||||||||
Sbjct: 679 ggagaggccgaagtggatga 698

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>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 225777

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacagggcagatggtcctca 162
              ||||||||||||||||||||
Sbjct: 129896 tacagggcagatggtcctca 129877

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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    agatcacgtccctggacgag 362
              ||||||||||||||||||||
Sbjct: 142470 agatcacgtccctggacgag 142451

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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   accggcccgagcacgaggag 539
             ||||||||||||||||||||
Sbjct: 66259 accggcccgagcacgaggag 66240

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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     ccgaagtggatgaagatcac 349
               ||||||||||||||||||||
Sbjct: 3355421 ccgaagtggatgaagatcac 3355402

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     agatcacgtccctggacgag 362
               ||||||||||||||||||||
Sbjct: 2919285 agatcacgtccctggacgag 2919304

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>emb|BX296515.11| Pig DNA sequence from clone PigE-121D21, complete sequence
          Length = 179691

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 157    tcctcaaggtcgtcgaggccattg 180
              |||||||||||||| |||||||||
Sbjct: 123832 tcctcaaggtcgtcaaggccattg 123809

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>gb|BT024054.1| Zea mays clone EL01N0439D05 mRNA sequence
          Length = 1966

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 478  tcttcctctcctcggcctcc 497
            ||||||||||||||||||||
Sbjct: 1326 tcttcctctcctcggcctcc 1307

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>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    catcttcctctcctcggcctccct 499
              |||||||||| |||||||||||||
Sbjct: 101434 catcttcctcccctcggcctccct 101457

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>emb|AL606902.26| Mouse DNA sequence from clone RP23-167A12 on chromosome 4, complete
            sequence
          Length = 100421

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  cctccctctacatcctgcat 512
            ||||||||||||||||||||
Sbjct: 7814 cctccctctacatcctgcat 7833

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>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete
             sequence
          Length = 91481

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   aggagaggccgaagtggatg 341
             ||||||||||||||||||||
Sbjct: 91035 aggagaggccgaagtggatg 91016

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>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete
            sequence
          Length = 161787

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  aggagaggccgaagtggatg 341
            ||||||||||||||||||||
Sbjct: 1554 aggagaggccgaagtggatg 1535


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,716,159
Number of Sequences: 3902068
Number of extensions: 4716159
Number of successful extensions: 93526
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93212
Number of HSP's gapped (non-prelim): 310
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result