ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baalc21 |
|---|---|
| Clone Library Name | barley_pub |
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 39.7 bits (91), Expect = 0.006 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +3 Query: 186 LPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLL 365 L G VP W P L +++L ++GT+PP LGS L L L N+ ++P +L Sbjct: 437 LRGTVPQWLSNS--PSLQLLDLSWNQLSGTIPPWLGSLNSLFYLDLSNNTFIGEIPHSLT 494 Query: 366 SVKGLLS 386 S++ L+S Sbjct: 495 SLQSLVS 501
>TMM_ARATH (Q9SSD1) TOO MANY MOUTHS protein precursor (TMM)| Length = 496 Score = 37.7 bits (86), Expect = 0.022 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = +3 Query: 111 NGFIP--FTGVRDRRAAESHNARAPGPLPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPP 284 NG IP F R+ + R G +PG V LP L+V++L + G +PP Sbjct: 196 NGSIPLSFNRFSGLRSLDLSGNRLTGSIPGFV--------LPALSVLDLNQNLLTGPVPP 247 Query: 285 NLGSSGILTRLLLFGNSLSVQVPETL 362 L S G L ++ L N ++ +PE++ Sbjct: 248 TLTSCGSLIKIDLSRNRVTGPIPESI 273
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 35.0 bits (79), Expect = 0.14 Identities = 22/54 (40%), Positives = 30/54 (55%) Frame = +3 Query: 219 GLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 G LP L +EL + GT+P LG+ L L L+ N+LS +P TL +K L Sbjct: 89 GQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKL 142
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 35.0 bits (79), Expect = 0.14 Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Frame = +3 Query: 186 LPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETL- 362 L GEVP F G+L LAV++L G +PP LG L L L N L+ ++P L Sbjct: 483 LTGEVPKDF--GILSRLAVLQLGNNNFTGEIPPELGKCTTLVWLDLNTNHLTGEIPPRLG 540 Query: 363 -----LSVKGLLSYKFVIF 404 ++ GLLS + F Sbjct: 541 RQPGSKALSGLLSGNTMAF 559 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Frame = +3 Query: 198 VPAWFIRGLLPP-------LAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPE 356 +P + G +PP L ++L +NGT+PP +G+ L + + + N+++ ++P Sbjct: 382 LPDNLVTGEIPPAISQCSELRTIDLSLNYLNGTIPPEIGNLQKLEQFIAWYNNIAGEIPP 441 Query: 357 TLLSVKGL 380 + ++ L Sbjct: 442 EIGKLQNL 449
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 34.3 bits (77), Expect = 0.25 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +3 Query: 180 GPLPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPET 359 GP+PG + + L V L A+ GT+P GS L L L NSLS ++P++ Sbjct: 269 GPIPGSLLS------NSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDS 322 Query: 360 LLSVK 374 L S K Sbjct: 323 LSSAK 327 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +3 Query: 234 LAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 LA ++L + G +P +G+ +L+ L L NSL+ +P +LLS GL Sbjct: 233 LADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGL 281
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 33.5 bits (75), Expect = 0.42 Identities = 21/70 (30%), Positives = 40/70 (57%) Frame = +3 Query: 180 GPLPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPET 359 G LP P++FI LP L+ +++ +++G +PP +G L+ L + NS S Q+P Sbjct: 151 GSLP---PSFFIS--LPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSE 205 Query: 360 LLSVKGLLSY 389 + ++ L ++ Sbjct: 206 IGNISLLKNF 215 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/63 (34%), Positives = 32/63 (50%) Frame = +3 Query: 183 PLPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETL 362 PL +P F G L L+++ L + G +PP LG+ L L+L NSLS +P L Sbjct: 245 PLKCSIPKSF--GELHNLSILNLVSAELIGLIPPELGNCKSLKSLMLSFNSLSGPLPLEL 302 Query: 363 LSV 371 + Sbjct: 303 SEI 305
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = +3 Query: 243 VELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGLLSYKFVIFTLYFLG 422 ++L + G +P LG+ L L LF NSL PE+LLS+ L T+YF G Sbjct: 121 IDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHL-------ETVYFTG 173 Query: 423 S 425 + Sbjct: 174 N 174 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +3 Query: 225 LPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 +P L V +NG++P N+G+ LT L L N S VP +L ++ L Sbjct: 163 IPHLETVYFTGNGLNGSIPSNIGNMSELTTLWLDDNQFSGPVPSSLGNITTL 214 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 264 VNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGLLS 386 +NG++P LGS LT+L L NS S +P +L LL+ Sbjct: 583 LNGSIPSTLGSLTELTKLSLGENSFSGGIPTSLFQSNKLLN 623
>SYFB_SYNJB (Q2JHU3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 825 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%) Frame = +1 Query: 13 GRRISARWPPSPHLCPLASHVSF--------HDWXQHHPRPMDLSRSPAFAIDELQNL 162 GR + PP+PH A H+ HDW QH RPMD + + L+ L Sbjct: 596 GRVFAHALPPNPHPYREAEHIGGILGGDPNPHDW-QHRNRPMDWFEAKGLLVSALERL 652
>DNLJ_STAS1 (Q49YU8) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 667 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -1 Query: 422 PQKV*SKYNKFIR*KAFDGEQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLA 252 P K+ +R +A+ + F NL+ EE+P NPR A G R +D LA Sbjct: 153 PLKINESRTFEVRGEAYMPRKSFVNLNEAKAANEEQPFANPRNAAAGSLRQLDSKLA 209
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +3 Query: 264 VNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 ++GT+P +LGS L L L+ N L ++P+ L+ VK L Sbjct: 452 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 490
>DNLJ_BACSU (O31498) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 668 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = -1 Query: 422 PQKV*SKYNKFIR*KAFDGEQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLA 252 P K+ + + +R +A+ ++ F L+ E + EE+P NPR A G R +D +A Sbjct: 156 PLKMNRELSIEVRGEAYMPKRSFEALNEERIKNEEEPFANPRNAAAGSLRQLDPKIA 212
>DNLJ_STAES (Q8CRU0) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 665 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -1 Query: 422 PQKV*SKYNKFIR*KAFDGEQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLA 252 P K+ N +R +A+ + F +L+ E E+P NPR A G R +D LA Sbjct: 153 PLKIKEPLNFEVRGEAYMPRRSFIHLNNEKEQNGEQPFANPRNAAAGSLRQLDSKLA 209
>DNLJ_STAEQ (Q5HN30) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 665 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -1 Query: 422 PQKV*SKYNKFIR*KAFDGEQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLA 252 P K+ N +R +A+ + F +L+ E E+P NPR A G R +D LA Sbjct: 153 PLKIKEPLNFEVRGEAYMPRRSFIHLNNEKEQNGEQPFANPRNAAAGSLRQLDSKLA 209
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +3 Query: 186 LPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPET 359 L G +P G L +A+++L NGT+P +L S +L + L N+LS +PE+ Sbjct: 699 LSGMIPQQL--GGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPES 754 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = +3 Query: 264 VNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 + G++P +LGS L L+L+ N LS ++P+ L+ ++ L Sbjct: 463 LTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQAL 501
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +3 Query: 186 LPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPET 359 L G +P G L +A+++L NGT+P +L S +L + L N+LS +PE+ Sbjct: 699 LSGMIPQQL--GGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPES 754 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = +3 Query: 264 VNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 + G++P +LGS L L+L+ N LS ++P+ L+ ++ L Sbjct: 463 LTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQAL 501
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/74 (28%), Positives = 32/74 (43%) Frame = +3 Query: 159 SHNARAPGPLPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSL 338 S+N G PGE+ + L V++ NG LPP + L L GN Sbjct: 126 SNNGNLTGTFPGEILKAMV-----DLEVLDTYNNNFNGKLPPEMSELKKLKYLSFGGNFF 180 Query: 339 SVQVPETLLSVKGL 380 S ++PE+ ++ L Sbjct: 181 SGEIPESYGDIQSL 194
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +3 Query: 234 LAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETLLSVKGL 380 + V+ L + + GT+ P G+ L R++L N+L+ +P+ L ++ L Sbjct: 364 ITVISLEKMELTGTISPEFGAIKSLQRIILGINNLTGMIPQELTTLPNL 412
>RAD52_DEBHA (Q6BJ51) DNA repair and recombination protein RAD52| Length = 573 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = -2 Query: 487 LDKYECHCCIHKRQKHNRHLEDPRKYKVNITNLYDRRPLTESNVSGTWTERLFPKRRSLV 308 LD YE IHK ++ N +DP L R E+N + + + P S+ Sbjct: 357 LDDYELQMLIHKNRQ-NGGTDDPA--------LIARSSYAENNENSNSSGEVNPTNNSVQ 407 Query: 307 RIPDEPRL 284 IPD+P L Sbjct: 408 EIPDQPAL 415
>Y3432_MYCBO (P59986) Hypothetical protein Mb3432| Length = 348 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = -1 Query: 326 EEEKPSQNPR*AEIGRERAIDCDLAELDHGEWRQETADEPRRHLAG 189 E+EK + AE RER D DL EL + + R + AD +LAG Sbjct: 266 EDEKKMRMKSAAEAWRERGFDLDLTELIYFDQRNDVAD----YLAG 307
>Y3399_MYCTU (Q50726) Hypothetical protein Rv3399/MT3507| Length = 348 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = -1 Query: 326 EEEKPSQNPR*AEIGRERAIDCDLAELDHGEWRQETADEPRRHLAG 189 E+EK + AE RER D DL EL + + R + AD +LAG Sbjct: 266 EDEKKMRMKSAAEAWRERGFDLDLTELIYFDQRNDVAD----YLAG 307
>DNLJ_STAHJ (Q4L7L9) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 667 Score = 30.0 bits (66), Expect = 4.6 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -1 Query: 422 PQKV*SKYNKFIR*KAFDGEQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLA 252 P K+ + +R +A+ F L+ E EE+P NPR A G R +D LA Sbjct: 153 PLKINEPLSFEVRGEAYMPRSSFIRLNEEKEKNEEQPFANPRNAAAGSLRQLDPKLA 209
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +3 Query: 186 LPGEVPAWFIRGLLPPLAVVELR*VAVNGTLPPNLGSSGILTRLLLFGNSLSVQVPETL 362 L G +P+W + L + +EL + +G LP ++G+ L R N L+ ++P+ L Sbjct: 248 LTGSIPSWITQ--LKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIPDNL 304
>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162 protein) (Centrosomin) Length = 1344 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -1 Query: 365 EQRFWNLDREAVPEEEKPSQNPR*AEIGRERAIDCDLAE-----LDHGEWRQETADE 210 E+R W+ D+E + + +N + E R+R D D + D G WR+ A+E Sbjct: 1160 EEREWDRDKEKDRDNQDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEE 1216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,159,681 Number of Sequences: 219361 Number of extensions: 1665816 Number of successful extensions: 5038 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5034 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
