ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalc13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence 252 9e-64
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 182 7e-43
3gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 182 7e-43
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
5dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
6dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
7dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
8dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
9dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
10gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal pr... 174 2e-40
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 56 1e-04
12gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 54 4e-04
13dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 50 0.007
14emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 48 0.027
15dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 48 0.027
16gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, comple... 46 0.11
17gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complet... 46 0.11
18emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 o... 44 0.42
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.7
20gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, com... 42 1.7
21gb|AE016753.1| Mus musculus chromosome 10 high-growth region, se... 42 1.7
22dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.7
23gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Can... 42 1.7
24gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulato... 42 1.7
25ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
26ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
27gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL... 40 6.6
28gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, com... 40 6.6
29gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.6
30gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 6.6
31gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, com... 40 6.6
32gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 6.6
33gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 6.6
34gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.6
35emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal protei... 40 6.6
36emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon 40 6.6
37gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-s... 40 6.6
38emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.6
39dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.6
40gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.6
41gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, com... 40 6.6
42gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 5... 40 6.6
43gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt] 40 6.6
44gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 6.6
45gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
47gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, compl... 40 6.6
48gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, co... 40 6.6
49gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.6
50dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.6
51dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.6
52dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
53dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
54dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
55emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate... 40 6.6
56gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.6
57gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.6
58emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on ch... 40 6.6
59gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complet... 40 6.6
60dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sod... 40 6.6 
>gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence
          Length = 923

 Score =  252 bits (127), Expect = 9e-64
 Identities = 265/305 (86%), Gaps = 7/305 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           ||||||||||||||| ||| ||||||| ||||||| || |||||||||||||||||||||
Sbjct: 429 caaccttgggctcccaagg-accatgg-acttcctgggtgtcaaccccaacagcttcgac 486

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           |||||||||||||||| | | |||||||| ||||||||||||||||||||| ||||| ||
Sbjct: 487 gggcacggcaactacagccttggcctccgtgaccagggcgtgttcccggag-atcccgta 545

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||||||||| ||||||||||| ||||||||  |||||||||||| ||||||||| ||
Sbjct: 546 cgaggtgggcgggaagaagaacggcatggacgtgtccatcgtcaccagcgccaagacgga 605

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||||   |||||| | |  |||||||||||||| ||| | |||||||||||| |
Sbjct: 606 caacgaggcgttcaggctggtggtcctcctcggcatgccgttctcggagaacatcaagac 665

                                                                       
Query: 242 tgac---cagttcaagaagaagaggttgaagcgccaccacttcatgagcaagggc-aggg 297
            |||     | ||  |||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 666 cgacgtggtgatccggaagaagaggttgaagcgcccccacttcctgagcaagggcaaggg 725

                
Query: 298 gaagg 302
           |||||
Sbjct: 726 gaagg 730
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                           
Query: 2       caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
               |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 1413907 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 1413850

                                                                           
Query: 62      gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
               || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 1413849 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 1413791

                                                                           
Query: 122     cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
               |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 1413790 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 1413731

                                                                           
Query: 182     caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
               ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 1413730 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 1413671



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                               
Query: 254     gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
               ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413655 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 1413608
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                         
Query: 2     caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
             |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 75410 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 75353

                                                                         
Query: 62    gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
             || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 75352 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 75294

                                                                         
Query: 122   cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
             |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 75293 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 75234

                                                                         
Query: 182   caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
             ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 75233 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 75174



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                             
Query: 254   gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75158 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 75111
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                           
Query: 2       caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
               |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 1413905 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 1413848

                                                                           
Query: 62      gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
               || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 1413847 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 1413789

                                                                           
Query: 122     cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
               |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 1413788 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 1413729

                                                                           
Query: 182     caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
               ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 1413728 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 1413669



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                               
Query: 254     gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
               ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413653 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 1413606
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>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07, full
           insert sequence
          Length = 1009

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 542 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 599

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 600 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 658

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 659 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 718

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 719 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 778



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 841
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>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22, full
           insert sequence
          Length = 1011

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 549 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 606

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 607 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 665

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 666 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 725

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 726 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 785



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 848
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>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full
           insert sequence
          Length = 2916

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 565 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 508

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 507 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 449

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 448 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 389

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 388 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 329



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 266
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>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09, full
           insert sequence
          Length = 1044

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 571 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 628

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 629 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 687

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 688 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 747

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 748 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 807



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 870
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>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09, full
           insert sequence
          Length = 1013

 Score =  182 bits (92), Expect = 7e-43
 Identities = 206/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 546 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 603

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 604 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 662

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||||||
Sbjct: 663 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagaccga 722

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 723 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 782



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 845
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>gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal protein L5 (rpl5) mRNA,
           nuclear gene encoding chloroplast protein, partial cds
          Length = 1025

 Score =  174 bits (88), Expect = 2e-40
 Identities = 205/240 (85%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   caaccttgggctccctaggnaccatggnacttcctaggcgtcaaccccaacagcttcgac 61
           |||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||| || 
Sbjct: 538 caaccttgggcttcctagg-accatgg-acttccttggtgtcaaccccaacagctttgat 595

                                                                       
Query: 62  gggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagnatccccta 121
           || || ||||||| |||||| ||||| || || |||||||||||||||||| ||||| ||
Sbjct: 596 ggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggag-atcccgta 654

                                                                       
Query: 122 cgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgccaagaccga 181
           |||||| || || |||||||| || |||||||||  ||||||||||||||| ||||| ||
Sbjct: 655 cgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcgaagacgga 714

                                                                       
Query: 182 caacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaacatcaagtc 241
           ||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| ||||||||||
Sbjct: 715 caacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcacatcaagtc 774



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 254 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 837
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 147    atggacgtcaccatcgtcaccaccgccaagaccgac 182
              |||||| |||||||||| ||||||||||||||||||
Sbjct: 318733 atggacatcaccatcgtgaccaccgccaagaccgac 318768
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                              
Query: 154     tcaccatcgtcaccaccgccaagaccgacaa 184
               ||||||||||||||||||||| |||||||||
Sbjct: 1399316 tcaccatcgtcaccaccgccacgaccgacaa 1399346
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 147     atggacgtcaccatcgtcaccaccgccaagaccgacaacgaggcg 191
               |||||||| | ||||||||| ||||||||||||||| | ||||||
Sbjct: 3269130 atggacgtgatcatcgtcacgaccgccaagaccgacgaagaggcg 3269086
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 56      ttcgacgggcacggcaactacaccatcggcct 87
               |||||||| ||||||||||||||| |||||||
Sbjct: 2096371 ttcgacggccacggcaactacaccttcggcct 2096340
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 38      ggcgtcaaccccaacagcttcgacgggcacggcaactacaccatcggcctccgcga 93
               ||||||| ||||||   ||||||||| | ||||||||||||| ||||||| |||||
Sbjct: 4113776 ggcgtcagccccaaagccttcgacggccgcggcaactacaccctcggcctgcgcga 4113721



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 43      caaccccaacagcttcgacg 62
               ||||||||||||||||||||
Sbjct: 1995939 caaccccaacagcttcgacg 1995958
to top
>gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, complete sequence
          Length = 170293

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 363    cttttgcatagtttggtttagatattt 389
              ||||||||||||||| |||||||||||
Sbjct: 147152 cttttgcatagtttgttttagatattt 147126
to top
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence
          Length = 188083

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 363   cttttgcatagtttggtttagatattt 389
             ||||||||||||||| |||||||||||
Sbjct: 13249 cttttgcatagtttgttttagatattt 13223
to top
>emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 on chromosome 6q22 Contains the
              3' end of the HSF2 gene for  Heat Shock Transcription
              Factor 2 and the 3' end of a novel gene for KIAA1253
              protein (similar to tumor differentially expressed TDE1),
              complete sequence
          Length = 160203

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 406    cttattacttgctgttcatgtt 427
              ||||||||||||||||||||||
Sbjct: 119351 cttattacttgctgttcatgtt 119330
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 164     caccaccgccaagaccgacaa 184
               |||||||||||||||||||||
Sbjct: 2637984 caccaccgccaagaccgacaa 2637964
to top
>gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, complete sequence
          Length = 173365

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   tgtctcttattacttgctgtt 421
             |||||||||||||||||||||
Sbjct: 55855 tgtctcttattacttgctgtt 55835
to top
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the
              complete sequence
          Length = 350029

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    cctttgttgcttcccactttg 350
              |||||||||||||||||||||
Sbjct: 215862 cctttgttgcttcccactttg 215842
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 143     cggtatggacgtcaccatcgtcaccaccgccaagaccgacaacgaggcg 191
               |||||||||| ||||| ||  |||||| |||||||||||| | ||||||
Sbjct: 5930482 cggtatggacatcaccgtctgcaccacggccaagaccgacgaagaggcg 5930434
to top
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184707

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    cctttgttgcttcccactttg 350
              |||||||||||||||||||||
Sbjct: 112037 cctttgttgcttcccactttg 112057
to top
>gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulatory protein GlnK (glnK)
           gene, complete cds; and putative ammonia transporter
           (amtB) gene, partial cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 164 caccaccgccaagaccgacaa 184
           |||||||||||||||||||||
Sbjct: 821 caccaccgccaagaccgacaa 841
to top
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 158 catcgtcaccaccgccaagaccgacaac 185
           |||||||||||||||| || ||||||||
Sbjct: 945 catcgtcaccaccgccgagtccgacaac 972
to top
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 158  catcgtcaccaccgccaagaccgacaac 185
            |||||||||||||||| || ||||||||
Sbjct: 1065 catcgtcaccaccgccgagtccgacaac 1092
to top
>gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL), complete sequence
          Length = 79586

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  gagcaagggcaggggaagga 303
            ||||||||||||||||||||
Sbjct: 7207 gagcaagggcaggggaagga 7188
to top
>gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, complete sequence
          Length = 187888

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    gttgcttcccactttgtcaa 354
              ||||||||||||||||||||
Sbjct: 180975 gttgcttcccactttgtcaa 180956
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 143     cggtatggacgtcaccatcgtcaccaccgccaagaccgac 182
               |||||||||| ||||  |||| ||||||||||||| ||||
Sbjct: 2077242 cggtatggacatcacggtcgtgaccaccgccaagaacgac 2077203
to top
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    catgagcaagggcaggggaa 300
              ||||||||||||||||||||
Sbjct: 235273 catgagcaagggcaggggaa 235292
to top
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    agggcaggggaaggaagtga 308
              ||||||||||||||||||||
Sbjct: 160690 agggcaggggaaggaagtga 160671
to top
>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   gagcaagggcaggggaagga 303
             ||||||||||||||||||||
Sbjct: 60653 gagcaagggcaggggaagga 60672
to top
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    agggcaggggaaggaagtga 308
              ||||||||||||||||||||
Sbjct: 154921 agggcaggggaaggaagtga 154940
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     cgtcaccatcgtcaccaccg 171
               ||||||||||||||||||||
Sbjct: 2351534 cgtcaccatcgtcaccaccg 2351553
to top
>emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal proteins S17, L14, L24, L5, S14,
            S8 & L6
          Length = 2700

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 42   tcaaccccaacagcttcgacgggcacggcaactaca 77
            |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1440 tcaaccccaacagctttgacggccggggcaactaca 1475
to top
>emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon
          Length = 6858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 56   ttcgacgggcacggcaactacaccatcggcct 87
            ||||||||  |||||||||||||| |||||||
Sbjct: 1458 ttcgacggcaacggcaactacaccttcggcct 1489
to top
>gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-structural protein
           (NSm) mRNA, partial cds
          Length = 688

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 246 cagttcaagaagaagaggttgaag 269
           ||||| ||||||||||||||||||
Sbjct: 656 cagttgaagaagaagaggttgaag 679
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    gacgtcaccatcgtcaccac 169
              ||||||||||||||||||||
Sbjct: 100630 gacgtcaccatcgtcaccac 100611
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ctacgaggtgggcggcaaga 138
               ||||||||||||||||||||
Sbjct: 4241521 ctacgaggtgggcggcaaga 4241540
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     accaccgccaagaccgacaa 184
               ||||||||||||||||||||
Sbjct: 4161560 accaccgccaagaccgacaa 4161579
to top
>gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, complete sequence
          Length = 212598

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gttgcttcccactttgtcaa 354
              ||||||||||||||||||||
Sbjct: 164095 gttgcttcccactttgtcaa 164114
to top
>gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 549 nt]
          Length = 549

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 42  tcaaccccaacagcttcgacgggcacggcaactaca 77
           |||||||||||||||| ||||| |  ||||||||||
Sbjct: 359 tcaaccccaacagctttgacggccggggcaactaca 394
to top
>gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt]
          Length = 549

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 42  tcaaccccaacagcttcgacgggcacggcaactaca 77
           |||||||||||||||| ||||| |  ||||||||||
Sbjct: 359 tcaaccccaacagctttgacggccggggcaactaca 394
to top
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    agcaagggcaggggaaggaa 304
              ||||||||||||||||||||
Sbjct: 199403 agcaagggcaggggaaggaa 199384
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     cgtcaccatcgtcaccaccg 171
               ||||||||||||||||||||
Sbjct: 3825558 cgtcaccatcgtcaccaccg 3825539
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 158      catcgtcaccaccgccaagaccgacaac 185
                |||||||||||||||| || ||||||||
Sbjct: 23047390 catcgtcaccaccgccgagtccgacaac 23047363



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 158      catcgtcaccaccgccaagaccgacaac 185
                |||||||||||||||| || ||||||||
Sbjct: 23027052 catcgtcaccaccgccgagtccgacaac 23027079
to top
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence
          Length = 95291

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   gaaggaagtgaagatcaagc 317
             ||||||||||||||||||||
Sbjct: 13925 gaaggaagtgaagatcaagc 13944
to top
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence
          Length = 159741

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    agcaagggcaggggaaggaa 304
              ||||||||||||||||||||
Sbjct: 120041 agcaagggcaggggaaggaa 120060
to top
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 229    agaacatcaagtctgaccagttcaagaa 256
              |||||||||||| ||||||| |||||||
Sbjct: 979118 agaacatcaagtatgaccagatcaagaa 979145
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 42      tcaaccccaacagcttcgacgggcacggcaactaca 77
               |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1585009 tcaaccccaacagctttgacggccggggcaactaca 1584974
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 158     catcgtcaccaccgccaagaccga 181
               |||||||||||||||||| |||||
Sbjct: 1129409 catcgtcaccaccgccaacaccga 1129386
to top
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 158    catcgtcaccaccgccaagaccgacaac 185
              |||||||||||||||| || ||||||||
Sbjct: 107118 catcgtcaccaccgccgagtccgacaac 107091



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 158   catcgtcaccaccgccaagaccgacaac 185
             |||||||||||||||| || ||||||||
Sbjct: 86780 catcgtcaccaccgccgagtccgacaac 86807
to top
>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full
            insert sequence
          Length = 3147

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 158  catcgtcaccaccgccaagaccgacaac 185
            |||||||||||||||| || ||||||||
Sbjct: 1065 catcgtcaccaccgccgagtccgacaac 1092
to top
>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full
           insert sequence
          Length = 2361

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 158 catcgtcaccaccgccaagaccgacaac 185
           |||||||||||||||| || ||||||||
Sbjct: 322 catcgtcaccaccgccgagtccgacaac 349
to top
>emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons
            1-2 and joined CDS
          Length = 1700

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 158  catcgtcaccaccgccaagaccgacaac 185
            |||||||||||||||| || ||||||||
Sbjct: 1232 catcgtcaccaccgccgagtccgacaac 1259
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      gcctccgcgaccagggcgtg 103
               ||||||||||||||||||||
Sbjct: 2825392 gcctccgcgaccagggcgtg 2825411
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 42      tcaaccccaacagcttcgacgggcacggcaactaca 77
               |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1260879 tcaaccccaacagctttgacggccggggcaactaca 1260844
to top
>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete
             sequence
          Length = 201752

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   agggcaggggaaggaagtga 308
             ||||||||||||||||||||
Sbjct: 95889 agggcaggggaaggaagtga 95908
to top
>gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complete sequence
          Length = 101396

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 449   aaatggaaagttttgctttggtca 472
             |||| |||||||||||||||||||
Sbjct: 74760 aaattgaaagttttgctttggtca 74737
to top
>dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sodium/hydrogen
            exchanger isoform A3, complete cds
          Length = 14728

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  gagcaagggcaggggaagga 303
            ||||||||||||||||||||
Sbjct: 5428 gagcaagggcaggggaagga 5409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,068,136
Number of Sequences: 3902068
Number of extensions: 4068136
Number of successful extensions: 83292
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82500
Number of HSP's gapped (non-prelim): 771
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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