ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalb24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6474 Score = 517 bits (261), Expect = e-143 Identities = 466/532 (87%), Gaps = 2/532 (0%) Strand = Plus / Plus Query: 5 tttcttaccgtgnatccaaatgagcgtgttaaagnattggaatgaggttgccattgagtc 64 |||||||||| | |||||||||||||||| |||| ||||||| || ||||| ||||| || Sbjct: 4985 tttcttaccg-ggatccaaatgagcgtgtaaaag-attggaaggaagttgcaattgaatc 5042 Query: 65 agttccagggccactgataagtacacagtctgctcgttgcatggattgtggcactcctta 124 ||| ||||||||||| | | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 5043 agtgccagggccactactgaacacacagtctgctcgttgtatggattgtggaactccttt 5102 Query: 125 ctgtcatcaggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaa 184 ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 5103 ctgtcatcaggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaa 5162 Query: 185 tgaattagttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaa 244 |||| | ||||||||||| ||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 5163 tgaactggttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaa 5222 Query: 245 cttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttgg 304 ||||||||||||||||||| | || ||||||||||| |||||||| || ||||||||||| Sbjct: 5223 cttccctgaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttgg 5282 Query: 305 cattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttt 364 ||||| | | || |||||||| ||||||||||||||||| | || |||||||| ||||| Sbjct: 5283 cattattgaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttt 5342 Query: 365 tgaagagggatggatggtaccacgaccaccacttcaaagaacaggaaagaaaattgctat 424 ||||||||||||||||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 5343 tgaagagggatggatggtaccgcggcctccacttcaaagaacaggaaagaaggttgccat 5402 Query: 425 agttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatgggccattt 484 |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 5403 cattggaagtggtccggctggtttggctgctgcagatcaactaaacaaaatgggccattt 5462 Query: 485 tgtaacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 ||| || || ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 5463 tgttactgtgtttgaacgtgctgatcgtattggtggtctgatgatgtatgga 5514
>dbj|AB008845.1| Oryza sativa mRNA for NADH dependent Glutamate Synthase, complete cds Length = 7037 Score = 517 bits (261), Expect = e-143 Identities = 466/532 (87%), Gaps = 2/532 (0%) Strand = Plus / Plus Query: 5 tttcttaccgtgnatccaaatgagcgtgttaaagnattggaatgaggttgccattgagtc 64 |||||||||| | |||||||||||||||| |||| ||||||| || ||||| ||||| || Sbjct: 5273 tttcttaccg-ggatccaaatgagcgtgtaaaag-attggaaggaagttgcaattgaatc 5330 Query: 65 agttccagggccactgataagtacacagtctgctcgttgcatggattgtggcactcctta 124 ||| ||||||||||| | | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 5331 agtgccagggccactactgaacacacagtctgctcgttgtatggattgtggaactccttt 5390 Query: 125 ctgtcatcaggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaa 184 ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 5391 ctgtcatcaggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaa 5450 Query: 185 tgaattagttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaa 244 |||| | ||||||||||| ||||||||||||||| | ||||| || || ||||| ||||| Sbjct: 5451 tgaactggttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaa 5510 Query: 245 cttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttgg 304 ||||||||||||||||||| | || ||||||||||| |||||||| || ||||||||||| Sbjct: 5511 cttccctgaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttgg 5570 Query: 305 cattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttt 364 ||||| | | || |||||||| ||||||||||||||||| | || |||||||| ||||| Sbjct: 5571 cattattgaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttt 5630 Query: 365 tgaagagggatggatggtaccacgaccaccacttcaaagaacaggaaagaaaattgctat 424 ||||||||||||||||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 5631 tgaagagggatggatggtaccgcggcctccacttcaaagaacaggaaagaaggttgccat 5690 Query: 425 agttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatgggccattt 484 |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 5691 cattggaagtggtccggctggtttggctgctgcagatcaactaaacaaaatgggccattt 5750 Query: 485 tgtaacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 ||| || || ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 5751 tgttactgtgtttgaacgtgctgatcgtattggtggtctgatgatgtatgga 5802
>gb|BT024053.1| Zea mays clone EL01N0438E02 mRNA sequence Length = 2225 Score = 480 bits (242), Expect = e-132 Identities = 399/450 (88%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 86 tacacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcagg 145 |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 530 tacacaatctgctcgttgcatggactgtggcactcctttctgtcatcaggaaagctcagg 589 Query: 146 tgctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatag 205 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 590 tgctggttgtcctcttggaaataagatcccagaattcaatgaattagttcaccagaacag 649 Query: 206 atggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacg 265 |||||| |||||||||||||| ||||| ||||||| ||||||||||||||| |||||||| Sbjct: 650 atggcgcgaagcattggatcgactacttgagacaa-caacttccctgaattcactggacg 708 Query: 266 tgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatc 325 || |||||||||||||||||||| || ||||||||||| |||| | |||| || || || Sbjct: 709 agtttgccctgctccttgtgaggggtcatgtgttcttgggattattgagaatccggtgtc 768 Query: 326 aatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggtacc 385 |||||||| |||||||| |||| |||||||| ||||||||||||||||||||| | || Sbjct: 769 tatcaaaagtatagaatgtgcaatcatagacaaaggttttgaagagggatggatgattcc 828 Query: 386 acgaccaccacttcaaagaacaggaaagaaaattgctatagttggcagtggtcctgctgg 445 |||||| ||||||||||||||||||| ||| | || || ||||||||||| || |||| Sbjct: 829 acgacctccacttcaaagaacaggaaggaaggtggccattgttggcagtggaccatctgg 888 Query: 446 tttggccgctgctgatcaactaaataaaatgggccattttgtaacagtatttgaacgttc 505 |||||| ||||| ||||||||||||||||||||||| || ||||| || || |||||| | Sbjct: 889 tttggctgctgcagatcaactaaataaaatgggccacttcgtaactgtgttcgaacgtgc 948 Query: 506 agatcgtataggaggtcttatgatgtatgg 535 |||||| || |||||| | ||||||||||| Sbjct: 949 agatcgaattggaggtttaatgatgtatgg 978
>ref|XM_475886.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1830 Score = 416 bits (210), Expect = e-113 Identities = 442/518 (85%), Gaps = 1/518 (0%) Strand = Plus / Plus Query: 18 atccaaatgagcgtgttaaagnattggaatgaggttgccattgagtcagttccagggcca 77 |||||||||||||||| |||| |||||||||| ||||| ||||| | ||||| |||||| Sbjct: 344 atccaaatgagcgtgtaaaag-attggaatgaagttgcaattgaattggttcctgggcca 402 Query: 78 ctgataagtacacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaa 137 ||| ||| || || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 403 ctgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcaggag 462 Query: 138 agctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcac 197 | || |||||||||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 463 ggttctggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcat 522 Query: 198 cagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaattt 257 ||||||||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 523 cagaatagatggcatgaagccttggatcggctacttgagacaaacaatttccctgagttt 582 Query: 258 actggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaac 317 |||||||| || || |||||||||||||||||||| || || |||||||||| | || Sbjct: 583 actggacgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaat 642 Query: 318 ccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatgg 377 |||||||| || ||||||||||| ||| | || |||||||| || ||||||||||||||| Sbjct: 643 ccagtatccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatgg 702 Query: 378 atggtaccacgaccaccacttcaaagaacaggaaagaaaattgctatagttggcagtggt 437 ||||||||||| || ||||||| ||||||||||||| | ||||||| ||||||||||| Sbjct: 703 atggtaccacggcctccacttcggagaacaggaaagagagttgctattgttggcagtggc 762 Query: 438 cctgctggtttggccgctgctgatcaactaaataaaatgggccattttgtaacagtattt 497 || |||||| | || ||||| || ||||| || |||||||||||||| || || || ||| Sbjct: 763 ccagctggtctagctgctgcagaccaactgaacaaaatgggccatttcgtgactgtcttt 822 Query: 498 gaacgttcagatcgtataggaggtcttatgatgtatgg 535 |||||| | || ||||| ||||| || ||||||||||| Sbjct: 823 gaacgtgctgaccgtattggaggactgatgatgtatgg 860
>dbj|AK071893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053K07, full insert sequence Length = 1792 Score = 416 bits (210), Expect = e-113 Identities = 442/518 (85%), Gaps = 1/518 (0%) Strand = Plus / Plus Query: 18 atccaaatgagcgtgttaaagnattggaatgaggttgccattgagtcagttccagggcca 77 |||||||||||||||| |||| |||||||||| ||||| ||||| | ||||| |||||| Sbjct: 39 atccaaatgagcgtgtaaaag-attggaatgaagttgcaattgaattggttcctgggcca 97 Query: 78 ctgataagtacacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaa 137 ||| ||| || || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 98 ctgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcaggag 157 Query: 138 agctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcac 197 | || |||||||||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 158 ggttctggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcat 217 Query: 198 cagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaattt 257 ||||||||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 218 cagaatagatggcatgaagccttggatcggctacttgagacaaacaatttccctgagttt 277 Query: 258 actggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaac 317 |||||||| || || |||||||||||||||||||| || || |||||||||| | || Sbjct: 278 actggacgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaat 337 Query: 318 ccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatgg 377 |||||||| || ||||||||||| ||| | || |||||||| || ||||||||||||||| Sbjct: 338 ccagtatccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatgg 397 Query: 378 atggtaccacgaccaccacttcaaagaacaggaaagaaaattgctatagttggcagtggt 437 ||||||||||| || ||||||| ||||||||||||| | ||||||| ||||||||||| Sbjct: 398 atggtaccacggcctccacttcggagaacaggaaagagagttgctattgttggcagtggc 457 Query: 438 cctgctggtttggccgctgctgatcaactaaataaaatgggccattttgtaacagtattt 497 || |||||| | || ||||| || ||||| || |||||||||||||| || || || ||| Sbjct: 458 ccagctggtctagctgctgcagaccaactgaacaaaatgggccatttcgtgactgtcttt 517 Query: 498 gaacgttcagatcgtataggaggtcttatgatgtatgg 535 |||||| | || ||||| ||||| || ||||||||||| Sbjct: 518 gaacgtgctgaccgtattggaggactgatgatgtatgg 555
>dbj|AK070485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049P18, full insert sequence Length = 2257 Score = 416 bits (210), Expect = e-113 Identities = 442/518 (85%), Gaps = 1/518 (0%) Strand = Plus / Plus Query: 18 atccaaatgagcgtgttaaagnattggaatgaggttgccattgagtcagttccagggcca 77 |||||||||||||||| |||| |||||||||| ||||| ||||| | ||||| |||||| Sbjct: 448 atccaaatgagcgtgtaaaag-attggaatgaagttgcaattgaattggttcctgggcca 506 Query: 78 ctgataagtacacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaa 137 ||| ||| || || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 507 ctgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcaggag 566 Query: 138 agctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcac 197 | || |||||||||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 567 ggttctggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcat 626 Query: 198 cagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaattt 257 ||||||||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 627 cagaatagatggcatgaagccttggatcggctacttgagacaaacaatttccctgagttt 686 Query: 258 actggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaac 317 |||||||| || || |||||||||||||||||||| || || |||||||||| | || Sbjct: 687 actggacgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaat 746 Query: 318 ccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatgg 377 |||||||| || ||||||||||| ||| | || |||||||| || ||||||||||||||| Sbjct: 747 ccagtatccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatgg 806 Query: 378 atggtaccacgaccaccacttcaaagaacaggaaagaaaattgctatagttggcagtggt 437 ||||||||||| || ||||||| ||||||||||||| | ||||||| ||||||||||| Sbjct: 807 atggtaccacggcctccacttcggagaacaggaaagagagttgctattgttggcagtggc 866 Query: 438 cctgctggtttggccgctgctgatcaactaaataaaatgggccattttgtaacagtattt 497 || |||||| | || ||||| || ||||| || |||||||||||||| || || || ||| Sbjct: 867 ccagctggtctagctgctgcagaccaactgaacaaaatgggccatttcgtgactgtcttt 926 Query: 498 gaacgttcagatcgtataggaggtcttatgatgtatgg 535 |||||| | || ||||| ||||| || ||||||||||| Sbjct: 927 gaacgtgctgaccgtattggaggactgatgatgtatgg 964
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 305 bits (154), Expect = 8e-80 Identities = 247/278 (88%) Strand = Plus / Minus Query: 132 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 191 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 28086646 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 28086587 Query: 192 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 251 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 28086586 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 28086527 Query: 252 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 311 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 28086526 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 28086467 Query: 312 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 371 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 28086466 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 28086407 Query: 372 ggatggatggtaccacgaccaccacttcaaagaacagg 409 |||||||||||||| || || ||||||||||||||||| Sbjct: 28086406 ggatggatggtaccgcggcctccacttcaaagaacagg 28086369 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 427 ttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatgggccattttg 486 |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 28086236 ttggaagtggtccggctggtttggctgctgcagatcaactaaacaaaatgggccattttg 28086177 Query: 487 taacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 | || || ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 28086176 ttactgtgtttgaacgtgctgatcgtattggtggtctgatgatgtatgga 28086127 Score = 111 bits (56), Expect = 2e-21 Identities = 114/131 (87%), Gaps = 2/131 (1%) Strand = Plus / Minus Query: 5 tttcttaccgtgnatccaaatgagcgtgttaaagnattggaatgaggttgccattgagtc 64 |||||||||| | |||||||||||||||| |||| ||||||| || ||||| ||||| || Sbjct: 28087161 tttcttaccg-ggatccaaatgagcgtgtaaaag-attggaaggaagttgcaattgaatc 28087104 Query: 65 agttccagggccactgataagtacacagtctgctcgttgcatggattgtggcactcctta 124 ||| ||||||||||| | | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 28087103 agtgccagggccactactgaacacacagtctgctcgttgtatggattgtggaactccttt 28087044 Query: 125 ctgtcatcagg 135 ||||||||||| Sbjct: 28087043 ctgtcatcagg 28087033
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 305 bits (154), Expect = 8e-80 Identities = 247/278 (88%) Strand = Plus / Minus Query: 132 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 191 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 101845 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 101786 Query: 192 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 251 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 101785 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 101726 Query: 252 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 311 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 101725 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 101666 Query: 312 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 371 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 101665 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 101606 Query: 372 ggatggatggtaccacgaccaccacttcaaagaacagg 409 |||||||||||||| || || ||||||||||||||||| Sbjct: 101605 ggatggatggtaccgcggcctccacttcaaagaacagg 101568 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 427 ttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatgggccattttg 486 |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 101435 ttggaagtggtccggctggtttggctgctgcagatcaactaaacaaaatgggccattttg 101376 Query: 487 taacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 | || || ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 101375 ttactgtgtttgaacgtgctgatcgtattggtggtctgatgatgtatgga 101326 Score = 111 bits (56), Expect = 2e-21 Identities = 114/131 (87%), Gaps = 2/131 (1%) Strand = Plus / Minus Query: 5 tttcttaccgtgnatccaaatgagcgtgttaaagnattggaatgaggttgccattgagtc 64 |||||||||| | |||||||||||||||| |||| ||||||| || ||||| ||||| || Sbjct: 102360 tttcttaccg-ggatccaaatgagcgtgtaaaag-attggaaggaagttgcaattgaatc 102303 Query: 65 agttccagggccactgataagtacacagtctgctcgttgcatggattgtggcactcctta 124 ||| ||||||||||| | | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 102302 agtgccagggccactactgaacacacagtctgctcgttgtatggattgtggaactccttt 102243 Query: 125 ctgtcatcagg 135 ||||||||||| Sbjct: 102242 ctgtcatcagg 102232
>dbj|AB001916.1| Oryza sativa gene for NADH-dependent glutamate synthase Length = 17070 Score = 305 bits (154), Expect = 8e-80 Identities = 247/278 (88%) Strand = Plus / Plus Query: 132 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 191 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 12389 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 12448 Query: 192 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 251 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 12449 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 12508 Query: 252 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 311 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 12509 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 12568 Query: 312 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 371 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 12569 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 12628 Query: 372 ggatggatggtaccacgaccaccacttcaaagaacagg 409 |||||||||||||| || || ||||||||||||||||| Sbjct: 12629 ggatggatggtaccgcggcctccacttcaaagaacagg 12666 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 427 ttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatgggccattttg 486 |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 12799 ttggaagtggtccggctggtttggctgctgcagatcaactaaacaaaatgggccattttg 12858 Query: 487 taacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 | || || ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 12859 ttactgtgtttgaacgtgctgatcgtattggtggtctgatgatgtatgga 12908 Score = 111 bits (56), Expect = 2e-21 Identities = 114/131 (87%), Gaps = 2/131 (1%) Strand = Plus / Plus Query: 5 tttcttaccgtgnatccaaatgagcgtgttaaagnattggaatgaggttgccattgagtc 64 |||||||||| | |||||||||||||||| |||| ||||||| || ||||| ||||| || Sbjct: 11874 tttcttaccg-ggatccaaatgagcgtgtaaaag-attggaaggaagttgcaattgaatc 11931 Query: 65 agttccagggccactgataagtacacagtctgctcgttgcatggattgtggcactcctta 124 ||| ||||||||||| | | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 11932 agtgccagggccactactgaacacacagtctgctcgttgtatggattgtggaactccttt 11991 Query: 125 ctgtcatcagg 135 ||||||||||| Sbjct: 11992 ctgtcatcagg 12002
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 250 bits (126), Expect = 4e-63 Identities = 231/266 (86%) Strand = Plus / Plus Query: 144 ggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaat 203 |||||||||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 10063 ggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaat 10122 Query: 204 agatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactgga 263 ||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 10123 agatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactgga 10182 Query: 264 cgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagta 323 || || || |||||||||||||||||||| || || |||||||||| | || |||||| Sbjct: 10183 cgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagta 10242 Query: 324 tcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggta 383 || || ||||||||||| ||| | || |||||||| || ||||||||||||||||||||| Sbjct: 10243 tccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggta 10302 Query: 384 ccacgaccaccacttcaaagaacagg 409 ||||| || ||||||| |||||||| Sbjct: 10303 ccacggcctccacttcggagaacagg 10328 Score = 107 bits (54), Expect = 4e-20 Identities = 103/118 (87%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 18 atccaaatgagcgtgttaaagnattggaatgaggttgccattgagtcagttccagggcca 77 |||||||||||||||| |||| |||||||||| ||||| ||||| | ||||| |||||| Sbjct: 7617 atccaaatgagcgtgtaaaag-attggaatgaagttgcaattgaattggttcctgggcca 7675 Query: 78 ctgataagtacacagtctgctcgttgcatggattgtggcactccttactgtcatcagg 135 ||| ||| || || |||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 7676 ctgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcagg 7733 Score = 77.8 bits (39), Expect = 3e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 409 gaaagaaaattgctatagttggcagtggtcctgctggtttggccgctgctgatcaactaa 468 |||||| | ||||||| ||||||||||| || |||||| | || ||||| || ||||| | Sbjct: 10420 gaaagagagttgctattgttggcagtggcccagctggtctagctgctgcagaccaactga 10479 Query: 469 ataaaatgggccattttgtaacagtatttgaacgttcagatcgtataggaggtcttatga 528 | |||||||||||||| || || || ||||||||| | || ||||| ||||| || |||| Sbjct: 10480 acaaaatgggccatttcgtgactgtctttgaacgtgctgaccgtattggaggactgatga 10539 Query: 529 tgtatgg 535 ||||||| Sbjct: 10540 tgtatgg 10546
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 250 bits (126), Expect = 4e-63 Identities = 231/266 (86%) Strand = Plus / Plus Query: 144 ggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaat 203 |||||||||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 27413933 ggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaat 27413992 Query: 204 agatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactgga 263 ||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 27413993 agatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactgga 27414052 Query: 264 cgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagta 323 || || || |||||||||||||||||||| || || |||||||||| | || |||||| Sbjct: 27414053 cgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagta 27414112 Query: 324 tcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggta 383 || || ||||||||||| ||| | || |||||||| || ||||||||||||||||||||| Sbjct: 27414113 tccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggta 27414172 Query: 384 ccacgaccaccacttcaaagaacagg 409 ||||| || ||||||| |||||||| Sbjct: 27414173 ccacggcctccacttcggagaacagg 27414198 Score = 107 bits (54), Expect = 4e-20 Identities = 103/118 (87%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 18 atccaaatgagcgtgttaaagnattggaatgaggttgccattgagtcagttccagggcca 77 |||||||||||||||| |||| |||||||||| ||||| ||||| | ||||| |||||| Sbjct: 27411487 atccaaatgagcgtgtaaaag-attggaatgaagttgcaattgaattggttcctgggcca 27411545 Query: 78 ctgataagtacacagtctgctcgttgcatggattgtggcactccttactgtcatcagg 135 ||| ||| || || |||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 27411546 ctgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcagg 27411603 Score = 77.8 bits (39), Expect = 3e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 409 gaaagaaaattgctatagttggcagtggtcctgctggtttggccgctgctgatcaactaa 468 |||||| | ||||||| ||||||||||| || |||||| | || ||||| || ||||| | Sbjct: 27414290 gaaagagagttgctattgttggcagtggcccagctggtctagctgctgcagaccaactga 27414349 Query: 469 ataaaatgggccattttgtaacagtatttgaacgttcagatcgtataggaggtcttatga 528 | |||||||||||||| || || || ||||||||| | || ||||| ||||| || |||| Sbjct: 27414350 acaaaatgggccatttcgtgactgtctttgaacgtgctgaccgtattggaggactgatga 27414409 Query: 529 tgtatgg 535 ||||||| Sbjct: 27414410 tgtatgg 27414416
>gb|AF314924.2| Phaseolus vulgaris NADH glutamate synthase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 7050 Score = 176 bits (89), Expect = 5e-41 Identities = 310/384 (80%), Gaps = 6/384 (1%) Strand = Plus / Plus Query: 99 cgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccc 158 ||||||||||| ||||| ||||||| |||||||||||||| ||| ||||||||| Sbjct: 5344 cgttgcatggactgtggtactcctttctgtcatcaggaaaactc------tggttgtcct 5397 Query: 159 cttggaaataagatcccagagttcaatgaattagttcaccagaatagatggcgtgaagca 218 ||||||||||| || ||||| || ||||| ||||| |||| ||||| |||||||||||| Sbjct: 5398 cttggaaataaaataccagaatttaatgagttagtataccaaaataggtggcgtgaagca 5457 Query: 219 ttggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtgtgccctgct 278 |||| | || || |||||||| ||||| || || |||||||| | || ||||| ||| Sbjct: 5458 ctggagaggcttcttgagacaaataactttccagagtttactggtagggtatgcccagct 5517 Query: 279 ccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcata 338 |||||||| ||||||||||| ||||| |||| | |||| |||||||| || ||||||||| Sbjct: 5518 ccttgtgaaggttcttgtgtccttggtattattgagaatccagtatccattaaaagcata 5577 Query: 339 gaatgctcaattatagacaagggttttgaagagggatggatggtaccacgaccaccactt 398 |||| | || |||||||| | |||||| ||||| |||||||| |||||||| ||| | Sbjct: 5578 gaatctgccatcatagacaaagcttttgaggagggttggatggtgccacgacctccagtg 5637 Query: 399 caaagaacaggaaagaaaattgctatagttggcagtggtcctgctggtttggccgctgct 458 | ||||| || || | | | || || ||||| ||||| || |||| |||| |||||| Sbjct: 5638 aatagaactgggaaaagagtggccattgttggaagtggaccatctggcctggcagctgct 5697 Query: 459 gatcaactaaataaaatgggccat 482 |||||||| ||||||||||||||| Sbjct: 5698 gatcaactgaataaaatgggccat 5721
>gb|AF314925.2| Phaseolus vulgaris NADH glutamate synthase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 7408 Score = 155 bits (78), Expect = 2e-34 Identities = 356/449 (79%), Gaps = 6/449 (1%) Strand = Plus / Plus Query: 87 acacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggt 146 |||||||| || ||||||||||| ||||| || |||| |||||||||||||| || Sbjct: 5590 acacagtcagcccgttgcatggactgtggtacccctttctgtcatcaggaaaattc---- 5645 Query: 147 gctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaataga 206 ||| ||||| ||||||||||| || ||||| || ||||| |||| |||| ||||| Sbjct: 5646 --tggatgtcctcttggaaataaaataccagaatttaatgagctagtataccaaaatagg 5703 Query: 207 tggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgt 266 ||| | |||||||| || | || || || ||||| ||||| || ||||||||||| || Sbjct: 5704 tggagggaagcattagagaggcttcttgaaacaaataactttcccgaatttactggtcgg 5763 Query: 267 gtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatca 326 || ||||| || |||||||| ||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 5764 gtatgcccagcaccttgtgaaggttcttgtgtccttggtattattgagaaccccgtatcc 5823 Query: 327 atcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggtacca 386 || |||||||| ||||| | || |||||||||| |||||| ||||| |||||||| ||| Sbjct: 5824 attaaaagcattgaatgtgccataatagacaaggcttttgaggagggttggatggtgcca 5883 Query: 387 cgaccaccacttcaaagaacaggaaagaaaattgctatagttggcagtggtcctgctggt 446 ||||| ||| | | ||||| || || | | | || || ||||| ||||| || ||||| Sbjct: 5884 cgacctccagtcaagagaactgggaaaagagtagccatcgttggaagtggaccatctggt 5943 Query: 447 ttggccgctgctgatcaactaaataaaatgggccattttgtaacagtatttgaacgttca 506 ||||| ||||||||||| |||||||||||||| ||| |||||||| | |||| | | Sbjct: 5944 ttggcagctgctgatcagctaaataaaatgggtcatgcggtaacagtgtatgaaagagct 6003 Query: 507 gatcgtataggaggtcttatgatgtatgg 535 ||| | || ||||| |||||||||||||| Sbjct: 6004 gataggattggagggcttatgatgtatgg 6032
>ref|NM_124725.2| Arabidopsis thaliana GLT1 AT5G53460 (GLT1) mRNA, complete cds Length = 6627 Score = 133 bits (67), Expect = 7e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 90 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 149 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 5221 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 5274 Query: 150 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 209 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 5275 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 5334 Query: 210 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 269 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 5335 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 5394 Query: 270 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 329 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 5395 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 5454 Query: 330 aaaagcatagaatg 343 |||||||| ||||| Sbjct: 5455 aaaagcattgaatg 5468
>dbj|AK222185.1| Arabidopsis thaliana mRNA for NADH-dependent glutamate synthase, complete cds, clone: RAFL24-12-H17 Length = 1868 Score = 133 bits (67), Expect = 7e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 90 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 149 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 48 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 101 Query: 150 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 209 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 102 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 161 Query: 210 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 269 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 162 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 221 Query: 270 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 329 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 222 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 281 Query: 330 aaaagcatagaatg 343 |||||||| ||||| Sbjct: 282 aaaagcattgaatg 295
>emb|BX832353.1|CNS09ZNJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2076 Score = 133 bits (67), Expect = 7e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 90 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 149 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 379 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 432 Query: 150 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 209 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 433 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 492 Query: 210 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 269 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 493 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 552 Query: 270 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 329 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 553 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 612 Query: 330 aaaagcatagaatg 343 |||||||| ||||| Sbjct: 613 aaaagcattgaatg 626
>dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN8 Length = 54528 Score = 127 bits (64), Expect = 4e-26 Identities = 163/196 (83%) Strand = Plus / Plus Query: 148 ctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagat 207 |||| ||||| || || ||||||||||| || ||||||||| | || ||||||| |||| Sbjct: 48584 ctgggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagat 48643 Query: 208 ggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtg 267 ||| ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || | Sbjct: 48644 ggcaagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgag 48703 Query: 268 tgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaa 327 | |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || | Sbjct: 48704 tatgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttcta 48763 Query: 328 tcaaaagcatagaatg 343 |||||||||| ||||| Sbjct: 48764 tcaaaagcattgaatg 48779 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 90 cagtctgctcgttgcatggattgtggcactcc 121 ||||| |||||||||||||||||||| ||||| Sbjct: 48378 cagtcagctcgttgcatggattgtggaactcc 48409
>gb|L01660.1|ALFNADHSYN Medicago sativa NADH-glutamate synthase mRNA, comlete cds Length = 7174 Score = 87.7 bits (44), Expect = 3e-14 Identities = 236/300 (78%) Strand = Plus / Plus Query: 237 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 296 ||||||||||| ||||| || ||||| || || |||||||| |||||||| ||||||||| Sbjct: 5526 acaaacaactttcctgagttcactgggcgggtttgccctgcaccttgtgaaggttcttgt 5585 Query: 297 gttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagac 356 || || || |||| | |||| ||||| || || |||| || ||||| | || || ||| Sbjct: 5586 gtcctcggtattattgagaatccagtttctattaaaaatattgaatgtgctatcattgac 5645 Query: 357 aagggttttgaagagggatggatggtaccacgaccaccacttcaaagaacaggaaagaaa 416 |||| |||||| ||||| |||||| | |||||||| || | | ||||| ||||| | | Sbjct: 5646 aaggcttttgaggagggttggatgattccacgacctcctgtcaagagaactggaaaaaga 5705 Query: 417 attgctatagttggcagtggtcctgctggtttggccgctgctgatcaactaaataaaatg 476 | || || ||||| ||||| || | || ||||| ||||| ||||| |||||||||||| Sbjct: 5706 gtagccattgttggaagtggaccatcaggcttggcagctgcagatcagctaaataaaatg 5765 Query: 477 ggccattttgtaacagtatttgaacgttcagatcgtataggaggtcttatgatgtatgga 536 || ||| | |||||||| |||||| | | ||||| || || || ||||||||||||||| Sbjct: 5766 ggtcatatagtaacagtgtttgaaagagctgatcgcattggtggccttatgatgtatgga 5825 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 87 acacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaa 138 ||||||||||| ||||||||||| ||||| ||||| | ||||||||||||| Sbjct: 5382 acacagtctgcccgttgcatggactgtggtactccattttgtcatcaggaaa 5433
>gb|DQ489494.1| Campylobacter jejuni subsp. jejuni 81-176 probable glutamate synthase (NADPH) large subunit (gltB) and probable glutamate synthase (NADPH) small subunit (gltD) genes, complete cds; and unknown gene Length = 7725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 249 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 298 |||||||||||||| ||||| ||||||||||||||||||| ||||||||| Sbjct: 6574 cctgaatttactggccgtgtttgccctgctccttgtgaggattcttgtgt 6623
>gb|L37606.1|ALFNDGS Medicago sativa (clone GG16-1) NADH-dependent glutamate synthase gene, complete cds Length = 14306 Score = 69.9 bits (35), Expect = 8e-09 Identities = 125/155 (80%) Strand = Plus / Plus Query: 237 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 296 ||||||||||| ||||| || ||||| || || |||||||| |||||||| ||||||||| Sbjct: 11923 acaaacaactttcctgagttcactgggcgggtttgccctgcaccttgtgaaggttcttgt 11982 Query: 297 gttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagac 356 || || || |||| | |||| ||||| || || |||| || ||||| | || || ||| Sbjct: 11983 gtcctcggtattattgagaatccagtttctattaaaaatattgaatgtgctatcattgac 12042 Query: 357 aagggttttgaagagggatggatggtaccacgacc 391 |||| |||||| ||||| |||||| | |||||||| Sbjct: 12043 aaggcttttgaggagggttggatgattccacgacc 12077 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 447 ttggccgctgctgatcaactaaataaaatgggccattttgtaacagtatttgaacgttca 506 ||||| ||||| ||||| |||||||||||||| ||| | |||||||| |||||| | | Sbjct: 12305 ttggcagctgcagatcagctaaataaaatgggtcatatagtaacagtgtttgaaagagct 12364 Query: 507 gatcgtataggaggtcttatgatgtatgga 536 ||||| || || || ||||||||||||||| Sbjct: 12365 gatcgcattggtggccttatgatgtatgga 12394 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 87 acacagtctgctcgttgcatggattgtggcactccttactgtcatcagg 135 ||||||||||| ||||||||||| ||||| ||||| | |||||||||| Sbjct: 11681 acacagtctgcccgttgcatggactgtggtactccattttgtcatcagg 11729
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 249 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 298 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 12936 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 12985
>gb|DQ202384.1| Campylobacter jejuni strain 81116 glutamate synthase (NADPH) small subunit (gltD), ribonuclease HII (rnhB), putative non-specific DNA binding protein, non-heme iron protein, dihydroxy-acid dehydratase (ilvD), putative integral membrane protein, hypothetical protein, and putative transcriptional regulatory protein genes, complete cds; and putative ATP/GTP binding protein gene, partial cds Length = 8394 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 249 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 298 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 310 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 359
>ref|XM_657646.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5134.2), mRNA Length = 6435 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 289 ||||| |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 5155 aacaatttccctgagtttactggccgtgtctgccctgctccttgtgaggg 5204
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 249 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 298 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 14692 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 14741
>ref|XM_381609.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01433.1) partial mRNA Length = 6342 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 299 ||||||||||| || || || || ||||| |||||||||||||| |||||| |||||||| Sbjct: 5077 aacaacttccccgagttcaccggccgtgtctgccctgctccttgcgagggtgcttgtgtt 5136 Query: 300 ct 301 || Sbjct: 5137 ct 5138 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 93 tctgctcgttgcatggattgtgg 115 ||||||||||||||||||||||| Sbjct: 4939 tctgctcgttgcatggattgtgg 4961
>ref|XM_952074.1| Neurospora crassa OR74A probable glutamate synthase [MIPS] (NCU01744.1) partial mRNA Length = 6351 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 295 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 5095 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 5150
>ref|XM_328182.1| Neurospora crassa OR74A probable glutamate synthase [MIPS] (NCU01744.1) partial mRNA Length = 6351 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 295 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 5095 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 5150
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 243 aacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 |||||||||||||||||||| ||||| || || ||||||||||| Sbjct: 232996 aacttccctgaatttactggtcgtgtatgtccagctccttgtga 232953
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 295 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 14366 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 14311
>emb|AM056054.1| Fusarium fujikuroi gltA gene for glutamate synthase, exons 1-3, strain IMI58289 Length = 8741 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 298 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||| ||||||| Sbjct: 6470 aacaacttcccggagttcactggtcgtgtttgcccggctccttgcgagggtgcttgtgt 6528 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 434 tggtcctgctggtttggccgctgctgatca 463 ||||||||||||| |||||||||||||||| Sbjct: 6664 tggtcctgctggtctggccgctgctgatca 6693
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 |||||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 2561485 aacaacttccctgagttcactggccgtgtctgccctgccccttgtga 2561439
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 235 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 294 |||||||||| ||||||||||| ||||| || || || || || ||||||||||| |||| Sbjct: 2111376 agacaaacaatttccctgaattcactgggcgggtctgtccggcgccttgtgagggctctt 2111317 Query: 295 gt 296 || Sbjct: 2111316 gt 2111315
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 235 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 294 |||||||||| ||||||||||| ||||| || || || || || ||||||||||| |||| Sbjct: 2112220 agacaaacaatttccctgaattcactgggcgggtctgtccggcgccttgtgagggctctt 2112161 Query: 295 gt 296 || Sbjct: 2112160 gt 2112159
>ref|XM_754904.1| Ustilago maydis 521 hypothetical protein (UM03850.1) partial mRNA Length = 6507 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 289 ||||||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 5221 aacaacttccccgagttcactggtcgtgtctgccctgctccttgcgaggg 5270 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 gacaagggttttgaagagggatggatggtacc 385 |||||||| ||||| ||||| ||||||||||| Sbjct: 5335 gacaagggctttgaggagggttggatggtacc 5366
>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence Length = 150968 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 391 caccacttcaaagaacaggaaagaaaat 418 |||||||||||||||||||||| ||||| Sbjct: 87418 caccacttcaaagaacaggaaaaaaaat 87391
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Minus Query: 235 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 294 ||||||||||||| || || |||||||| || || ||||||||||| || ||| || ||| Sbjct: 894736 agacaaacaactttcccgagtttactggccgcgtctgccctgctccgtgcgagagtgctt 894677 Query: 295 gtgt 298 |||| Sbjct: 894676 gtgt 894673
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 391 caccacttcaaagaacaggaaagaaaat 418 |||||||||||||||||||||| ||||| Sbjct: 1028216 caccacttcaaagaacaggaaaaaaaat 1028189
>ref|XM_567571.1| Cryptococcus neoformans var. neoformans JEC21 glutamate synthase (NADH) (CNJ02910) partial mRNA Length = 6665 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 294 ||||||||||||| || || |||||||| || || ||||||||||| || ||| || ||| Sbjct: 5063 agacaaacaactttcccgagtttactggccgcgtctgccctgctccgtgcgagagtgctt 5122 Query: 295 gtgt 298 |||| Sbjct: 5123 gtgt 5126
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 243 aacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 ||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 775601 aacttccctgagttcactgggcgtgtgtgcccagcaccttgtga 775644
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 243 aacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 289 ||||| ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 158223 aactttcctgagtttactgggcgtgtatgcccagccccttgtgaggg 158269
>gb|AE004307.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 215 of 251 of the complete chromosome Length = 14930 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 ||||||||||| || ||||| || ||||| |||||||| |||||||| Sbjct: 13357 aacaacttcccagagtttaccggtcgtgtctgccctgcaccttgtga 13403
>ref|XM_964960.1| PREDICTED: Tribolium castaneum similar to CG9674-PA, isoform A (LOC658584), mRNA Length = 6647 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 ||||||||||| || |||||||||||||| || || ||||| ||||| Sbjct: 4852 aacaacttccccgagtttactggacgtgtatgtccagctccgtgtga 4898
>emb|BX842645.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 4/4 Length = 167954 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 422 tatagttggcagtggtcctgctggttt 448 ||||||||| ||||||||||||||||| Sbjct: 21161 tatagttggtagtggtcctgctggttt 21135
>emb|AL590605.1|SPAPB1E7 S.pombe chromosome I BAC pB1E7 Length = 41788 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 252 gaatttactggacgtgtgtgccctgctccttgtga 286 |||||||| || ||||| ||||||||||||||||| Sbjct: 26685 gaatttacaggccgtgtctgccctgctccttgtga 26719
>ref|NM_001019557.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAPB1E7.07), partial mRNA Length = 6336 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 252 gaatttactggacgtgtgtgccctgctccttgtga 286 |||||||| || ||||| ||||||||||||||||| Sbjct: 5107 gaatttacaggccgtgtctgccctgctccttgtga 5141
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 299 ||||||||||| || |||||||| || || || || ||||||||||| || | ||||| Sbjct: 494215 aacaacttcccggagtttactggtcgagtttgtcccgctccttgtgaaagtgcatgtgtg 494156 Query: 300 cttggcattaa 310 ||||||||||| Sbjct: 494155 cttggcattaa 494145
>ref|XM_382004.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01828.1) partial mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 agacaagggttttgaagaggga 374 |||||||||||||||||||||| Sbjct: 837 agacaagggttttgaagaggga 858
>ref|XM_501118.1| Yarrowia lipolytica CLIB122, YALI0B19998g predicted mRNA Length = 6360 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 299 ||||||||||| || || |||||||| | || || ||||||||||||||| | |||||| Sbjct: 5113 aacaacttccccgagttcactggacgaatctgtcccgctccttgtgagggtgcctgtgtt 5172 Query: 300 ct 301 || Sbjct: 5173 ct 5174
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 agacaaacaacttccctgaatt 256 |||||||||||||||||||||| Sbjct: 127795 agacaaacaacttccctgaatt 127774
>emb|Z99113.2|BSUB0010 Bacillus subtilis complete genome (section 10 of 21): from 1807106 to 2014934 Length = 207829 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 237 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 286 ||||||||||| |||||||| || || || || ||||| ||||||||||| Sbjct: 201876 acaaacaactttcctgaattcacagggcgggtatgccccgctccttgtga 201827
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Minus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 299 ||||||||||| || || |||||||| | || || ||||||||||||||| | |||||| Sbjct: 2627534 aacaacttccccgagttcactggacgaatctgtcccgctccttgtgagggtgcctgtgtt 2627475 Query: 300 ct 301 || Sbjct: 2627474 ct 2627473
>gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, complete sequence Length = 167746 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 cccagtatcaatcaaaagcat 337 ||||||||||||||||||||| Sbjct: 70913 cccagtatcaatcaaaagcat 70893
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 tagttggcagtggtcctgctggttt 448 ||||||| ||||||||||||||||| Sbjct: 899427 tagttggtagtggtcctgctggttt 899451
>gb|AY623407.1| Aedes aegypti glutamate synthase (GOGAT) mRNA, partial cds Length = 5871 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 237 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 289 |||||||||||||| ||||| || ||||| || || || |||||||| ||||| Sbjct: 4198 acaaacaacttcccagaattcacgggacgagtatgtccagctccttgcgaggg 4250
>gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137242 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 tatcaatcaaaagcatagaat 342 ||||||||||||||||||||| Sbjct: 46596 tatcaatcaaaagcatagaat 46576
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 gctcgttgcatggattgtggc 116 ||||||||||||||||||||| Sbjct: 1779779 gctcgttgcatggattgtggc 1779759
>dbj|D85230.1|PEEGLTD Plectonema boryanum URF141, ORF243, NADH-dependent glutamate synthase large subunit (gltB) and small subunit (gltD) and URF289 genes, partial and complete cds Length = 9036 Score = 42.1 bits (21), Expect = 1.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 240 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 299 ||||| ||||| ||||| ||||| || || || |||||||||||||| || || ||||| Sbjct: 6916 aacaatttccccgaattcactgggcgggtctgtcctgctccttgtgaagggtcgtgtgta 6975 Query: 300 cttggcatt 308 || |||||| Sbjct: 6976 ctcggcatt 6984
>emb|AL772290.3| Mouse DNA sequence from clone RP23-66O4 on chromosome 4, complete sequence Length = 110623 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 aaagaaaattgctatagttgg 430 ||||||||||||||||||||| Sbjct: 87474 aaagaaaattgctatagttgg 87454
>gb|AF016673.1| Caenorhabditis elegans cosmid T06D4, complete sequence Length = 15263 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 aggaaagaaaattgctatag 426 |||||||||||||||||||| Sbjct: 2076 aggaaagaaaattgctatag 2057
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ttgtgttcttggcattaatc 312 |||||||||||||||||||| Sbjct: 3504065 ttgtgttcttggcattaatc 3504046
>gb|AC121918.3| Mus musculus BAC clone RP24-195D23 from chromosome 2, complete sequence Length = 179270 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ggttcttgtgttcttggcat 307 |||||||||||||||||||| Sbjct: 107206 ggttcttgtgttcttggcat 107225
>emb|CR674239.2|CNS0FJ7P Tetraodon nigroviridis full-length cDNA Length = 1147 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tcaaagaacaggaaagaaaa 417 |||||||||||||||||||| Sbjct: 44 tcaaagaacaggaaagaaaa 63
>gb|DQ334249.1| Drosophila miranda CG9674 gene, partial cds Length = 1008 Score = 40.1 bits (20), Expect = 7.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 235 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 294 |||| ||||||||||| || ||||| ||||| || ||||| ||||| || ||||| || | Sbjct: 800 agacgaacaacttccccgagtttacgggacgcgtctgcccggctccctgcgagggctcct 859 Query: 295 gtgt 298 |||| Sbjct: 860 gtgt 863
>emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chromosome 6, complete sequence Length = 133565 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 aagaacaggaaagaaaattg 420 |||||||||||||||||||| Sbjct: 111693 aagaacaggaaagaaaattg 111674
>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the genes for olfactory receptor MOR135-14 and -3 , two olfactory receptor MOR135 pseudogenes, the gene for a novel olfactory receptor family MOR135 member, a zinc finger protein pseudogene, the 5' end of the gene for a novel KRAB box domain containing protein and a CpG island, complete sequence Length = 194873 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cagtatcaatcaaaagcata 338 |||||||||||||||||||| Sbjct: 142268 cagtatcaatcaaaagcata 142287
>emb|BX251410.1| Tropheryma whipplei TW08/27, complete genome; segment 1/3 Length = 324050 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gttcaccagaatagatggcgtgaa 215 ||||||||||||||| |||||||| Sbjct: 179702 gttcaccagaatagacggcgtgaa 179725
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 actgtcatcaggaaagctcaggtgctgg 151 |||||||| ||||| ||||||||||||| Sbjct: 85857 actgtcataaggaaggctcaggtgctgg 85884
>emb|BX321884.15| Zebrafish DNA sequence from clone DKEYP-29A10 in linkage group 3, complete sequence Length = 173019 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 326 aatcaaaagcatagaatgctcaattata 353 ||||||||||||| |||| ||||||||| Sbjct: 15426 aatcaaaagcataaaatgttcaattata 15399
>gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence Length = 199514 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cagtatcaatcaaaagcata 338 |||||||||||||||||||| Sbjct: 74347 cagtatcaatcaaaagcata 74366
>gb|AF462032.1| Tuber borchii glutamate synthase mRNA, partial cds Length = 350 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 tgccctgctccttgtgagggttcttgtgttct 301 ||||| ||||||||||| ||| |||||||||| Sbjct: 136 tgcccagctccttgtgaaggtgcttgtgttct 167
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gttcaccagaatagatggcgtgaa 215 ||||||||||||||| |||||||| Sbjct: 180213 gttcaccagaatagacggcgtgaa 180236
>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18, complete sequence Length = 189711 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 aaaagcatagaatgctcaattata 353 ||||||| |||||||||||||||| Sbjct: 104906 aaaagcacagaatgctcaattata 104883
>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aaaagcatagaatgctcaattata 353 ||||||| |||||||||||||||| Sbjct: 50018 aaaagcacagaatgctcaattata 50041
>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete sequence Length = 155713 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aaaagcatagaatgctcaattata 353 ||||||| |||||||||||||||| Sbjct: 60095 aaaagcacagaatgctcaattata 60118
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 7.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 237 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 296 ||||| ||||| || ||||||||||| || || || || ||||||||||| || | ||| Sbjct: 2372097 acaaataactttccagaatttactggtcgagtatgtccagctccttgtgaaagtgcctgt 2372156 Query: 297 gttcttgg 304 |||||||| Sbjct: 2372157 gttcttgg 2372164
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 tggtcctgctggtttggccgctgc 457 |||| ||||||||||||||||||| Sbjct: 5704680 tggtgctgctggtttggccgctgc 5704703
>emb|AL732541.11| Mouse DNA sequence from clone RP23-306D20 on chromosome 2, complete sequence Length = 213918 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ggttcttgtgttcttggcat 307 |||||||||||||||||||| Sbjct: 208140 ggttcttgtgttcttggcat 208121
>gb|L11870.1|AEOABCA Aeromonas salmonicida AbcA protein (regulating A-protein expression) gene, complete cds Length = 927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ccctgaatttactggacgtg 267 |||||||||||||||||||| Sbjct: 297 ccctgaatttactggacgtg 316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,740,315 Number of Sequences: 3902068 Number of extensions: 4740315 Number of successful extensions: 89169 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88768 Number of HSP's gapped (non-prelim): 378 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
