ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalb19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470390.1| Oryza sativa (japonica cultivar-group), mRNA 240 4e-60
2ref|XM_470391.1| Oryza sativa (japonica cultivar-group), mRNA 240 4e-60
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 178 1e-41
4gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 178 1e-41
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
6gb|AY107165.1| Zea mays PCO075213 mRNA sequence 165 2e-37
7gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete seq... 44 0.50
8emb|Y12618.1|PSPPF1 Pisum sativum mRNA for PPF-1 protein 44 0.50
9emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 ... 44 0.50
10ref|NM_104006.1| Arabidopsis thaliana transmembrane receptor AT1... 42 2.0
11ref|NM_001036092.1| Arabidopsis thaliana transmembrane receptor ... 42 2.0
12gb|BT015497.1| Arabidopsis thaliana At1g51280 mRNA sequence 42 2.0
13gb|AC006673.1| Caenorhabditis elegans cosmid K09D9, complete seq... 42 2.0
14ref|XM_390373.1| Gibberella zeae PH-1 chromosome 1 predicted pro... 42 2.0
15gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, comple... 42 2.0
16gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Ho... 42 2.0
17gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, com... 42 2.0
18gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, com... 42 2.0
19dbj|AK221479.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.0
20emb|AJ297606.1|PSA297606 Pisum sativum mRNA for PPF-1 protein 42 2.0
21gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 42 2.0
22gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 geno... 42 2.0
23gb|AC110908.13| Mus musculus chromosome 7, clone RP24-181E10, co... 40 7.9
24gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, com... 40 7.9
25gb|AC151969.3| Mus musculus BAC clone RP24-255B1 from chromosome... 40 7.9
26gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosom... 40 7.9
27gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 7.9
28emb|AL358792.24| Human DNA sequence from clone RP11-280M4 on chr... 40 7.9
29emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chro... 40 7.9
30gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, comple... 40 7.9
31dbj|AK164409.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 7.9
32emb|AL626778.12| Mouse DNA sequence from clone RP23-326E2 on chr... 40 7.9
33gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, comp... 40 7.9
34gb|AC010903.8| Homo sapiens BAC clone RP11-550H9 from 2, complet... 40 7.9
35gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosom... 40 7.9
36gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosom... 40 7.9
37emb|BX000534.11| Zebrafish DNA sequence from clone DKEY-26G8 in ... 40 7.9
38emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on ch... 40 7.9
39emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-4... 40 7.9
40dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.9
41emb|AL627304.16| Mouse DNA sequence from clone RP23-285N14 on ch... 40 7.9
42gb|AC002980.1|AC002980 Homo sapiens Xp22 BAC 620F15 (Genome Syst... 40 7.9
43emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-7... 40 7.9
44emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chro... 40 7.9 
>ref|XM_470390.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1892

 Score =  240 bits (121), Expect = 4e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                        
Query: 3    ggttattttgctctttccgttccttctggnttgagtctatattggcttacaaataatgtc 62
            |||||||||||||| || |||||||||||  | ||||||||||||||||| |||||| ||
Sbjct: 931  ggttattttgctctctctgttccttctggactaagtctatattggcttacgaataatatc 990

                                                                        
Query: 63   cttagcagtgcacaacaagtgtggcttcaaaagcttggaggtgccaaaaatcctgtccaa 122
            ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||
Sbjct: 991  cttagcactgcacaacaagtatggcttcaaaagcttggaggtgccaaaaatcccgtcaaa 1050

                                                                        
Query: 123  gaatatattgacaagcttggtagagaggaatcaactaatgttggaaagcatgaacctgct 182
            ||||| ||||| ||||| | || ||| |||||||||||| |||||||||  || ||||||
Sbjct: 1051 gaatacattgataagctcgctaaagaagaatcaactaatcttggaaagcccgagcctgct 1110

                                                                        
Query: 183  gataagagggaggctctcccaaaagctggtaaaccccagcctggtcaagtgccaaaacca 242
              |||||| ||  ||||||| |||| ||||||||||| | |  |||||| |||| |||||
Sbjct: 1111 attaagagtgatcctctccctaaagttggtaaacccccggccagtcaagagccagaacca 1170

                                                                        
Query: 243  agtgaaccgcagcgtggtggaaggtttaagaaattaatggaacaagagtcgaggagaaaa 302
            |||| ||| || ||||||| ||| ||||  ||| ||| |||| ||||||| |||||||||
Sbjct: 1171 agtggaccacaacgtggtgaaagatttagaaaactaaaggaagaagagtcaaggagaaaa 1230
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>ref|XM_470391.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2188

 Score =  240 bits (121), Expect = 4e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                        
Query: 3    ggttattttgctctttccgttccttctggnttgagtctatattggcttacaaataatgtc 62
            |||||||||||||| || |||||||||||  | ||||||||||||||||| |||||| ||
Sbjct: 1269 ggttattttgctctctctgttccttctggactaagtctatattggcttacgaataatatc 1328

                                                                        
Query: 63   cttagcagtgcacaacaagtgtggcttcaaaagcttggaggtgccaaaaatcctgtccaa 122
            ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1329 cttagcactgcacaacaagtatggcttcaaaagcttggaggtgccaaaaatcccgtcaaa 1388

                                                                        
Query: 123  gaatatattgacaagcttggtagagaggaatcaactaatgttggaaagcatgaacctgct 182
            ||||| ||||| ||||| | || ||| |||||||||||| |||||||||  || ||||||
Sbjct: 1389 gaatacattgataagctcgctaaagaagaatcaactaatcttggaaagcccgagcctgct 1448

                                                                        
Query: 183  gataagagggaggctctcccaaaagctggtaaaccccagcctggtcaagtgccaaaacca 242
              |||||| ||  ||||||| |||| ||||||||||| | |  |||||| |||| |||||
Sbjct: 1449 attaagagtgatcctctccctaaagttggtaaacccccggccagtcaagagccagaacca 1508

                                                                        
Query: 243  agtgaaccgcagcgtggtggaaggtttaagaaattaatggaacaagagtcgaggagaaaa 302
            |||| ||| || ||||||| ||| ||||  ||| ||| |||| ||||||| |||||||||
Sbjct: 1509 agtggaccacaacgtggtgaaagatttagaaaactaaaggaagaagagtcaaggagaaaa 1568
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Plus

                                                                            
Query: 46       ggcttacaaataatgtccttagcagtgcacaacaagtgtggcttcaaaagcttggaggtg 105
                ||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 35211932 ggcttacgaataatatccttagcactgcacaacaagtatggcttcaaaagcttggaggtg 35211991

                                                                            
Query: 106      ccaaaaatcctgtccaagaatatattgacaagcttggtagagaggaatcaactaatgttg 165
                |||||||||| ||| ||||||| ||||| ||||| | || ||| |||||||||||| |||
Sbjct: 35211992 ccaaaaatcccgtcaaagaatacattgataagctcgctaaagaagaatcaactaatcttg 35212051

                                                                            
Query: 166      gaaagcatgaacctgctgataagagggaggctctcccaaaagctggtaaaccccagcctg 225
                ||||||  || ||||||  |||||| ||  ||||||| |||| ||||||||||| | |  
Sbjct: 35212052 gaaagcccgagcctgctattaagagtgatcctctccctaaagttggtaaacccccggcca 35212111

                                                          
Query: 226      gtcaagtgccaaaaccaagtgaaccgcagcgtggtggaaggt 267
                |||||| |||| ||||||||| ||| || ||||||| |||||
Sbjct: 35212112 gtcaagagccagaaccaagtggaccacaacgtggtgaaaggt 35212153



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 3        ggttattttgctctttccgttccttctggnttgagtctatattgg 47
                |||||||||||||| || |||||||||||  | ||||||||||||
Sbjct: 35211592 ggttattttgctctctctgttccttctggactaagtctatattgg 35211636
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Plus

                                                                         
Query: 46    ggcttacaaataatgtccttagcagtgcacaacaagtgtggcttcaaaagcttggaggtg 105
             ||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 90693 ggcttacgaataatatccttagcactgcacaacaagtatggcttcaaaagcttggaggtg 90752

                                                                         
Query: 106   ccaaaaatcctgtccaagaatatattgacaagcttggtagagaggaatcaactaatgttg 165
             |||||||||| ||| ||||||| ||||| ||||| | || ||| |||||||||||| |||
Sbjct: 90753 ccaaaaatcccgtcaaagaatacattgataagctcgctaaagaagaatcaactaatcttg 90812

                                                                         
Query: 166   gaaagcatgaacctgctgataagagggaggctctcccaaaagctggtaaaccccagcctg 225
             ||||||  || ||||||  |||||| ||  ||||||| |||| ||||||||||| | |  
Sbjct: 90813 gaaagcccgagcctgctattaagagtgatcctctccctaaagttggtaaacccccggcca 90872

                                                       
Query: 226   gtcaagtgccaaaaccaagtgaaccgcagcgtggtggaaggt 267
             |||||| |||| ||||||||| ||| || ||||||| |||||
Sbjct: 90873 gtcaagagccagaaccaagtggaccacaacgtggtgaaaggt 90914



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 3     ggttattttgctctttccgttccttctggnttgagtctatattgg 47
             |||||||||||||| || |||||||||||  | ||||||||||||
Sbjct: 90353 ggttattttgctctctctgttccttctggactaagtctatattgg 90397
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Plus

                                                                            
Query: 46       ggcttacaaataatgtccttagcagtgcacaacaagtgtggcttcaaaagcttggaggtg 105
                ||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 35302004 ggcttacgaataatatccttagcactgcacaacaagtatggcttcaaaagcttggaggtg 35302063

                                                                            
Query: 106      ccaaaaatcctgtccaagaatatattgacaagcttggtagagaggaatcaactaatgttg 165
                |||||||||| ||| ||||||| ||||| ||||| | || ||| |||||||||||| |||
Sbjct: 35302064 ccaaaaatcccgtcaaagaatacattgataagctcgctaaagaagaatcaactaatcttg 35302123

                                                                            
Query: 166      gaaagcatgaacctgctgataagagggaggctctcccaaaagctggtaaaccccagcctg 225
                ||||||  || ||||||  |||||| ||  ||||||| |||| ||||||||||| | |  
Sbjct: 35302124 gaaagcccgagcctgctattaagagtgatcctctccctaaagttggtaaacccccggcca 35302183

                                                          
Query: 226      gtcaagtgccaaaaccaagtgaaccgcagcgtggtggaaggt 267
                |||||| |||| ||||||||| ||| || ||||||| |||||
Sbjct: 35302184 gtcaagagccagaaccaagtggaccacaacgtggtgaaaggt 35302225



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 3        ggttattttgctctttccgttccttctggnttgagtctatattgg 47
                |||||||||||||| || |||||||||||  | ||||||||||||
Sbjct: 35301664 ggttattttgctctctctgttccttctggactaagtctatattgg 35301708
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>gb|AY107165.1| Zea mays PCO075213 mRNA sequence
          Length = 1006

 Score =  165 bits (83), Expect = 2e-37
 Identities = 124/138 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttattttgctctttccgttccttctggnttgagtctatattggcttacaaataatgtc 62
           |||||||||||||||||||| ||||| ||  | || || || ||||||||||||||| ||
Sbjct: 357 ggttattttgctctttccgtgccttcaggactaaggctgtactggcttacaaataatatc 416

                                                                       
Query: 63  cttagcagtgcacaacaagtgtggcttcaaaagcttggaggtgccaaaaatcctgtccaa 122
           || || | |||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 417 ctcagtactgcacaacaagtgtggcttcaaaagcttggaggtgcaaaaaatcctgtcaaa 476

                             
Query: 123 gaatatattgacaagctt 140
           ||||||||||||||||||
Sbjct: 477 gaatatattgacaagctt 494



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 211 gtaaaccccagcctggtcaagtgccaaaaccaagtgaaccgcagcgtggtggaaggttta 270
           |||||||||||||| | |||| ||| ||||||||||  || || ||||||| ||| ||||
Sbjct: 565 gtaaaccccagcctagccaagagccgaaaccaagtgggccacaacgtggtgaaagattta 624

                
Query: 271 agaaa 275
            ||||
Sbjct: 625 ggaaa 629
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>gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete sequence
          Length = 119925

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 3      ggttattttgctctttccgttccttc 28
              ||||||||||||||||| ||||||||
Sbjct: 113068 ggttattttgctctttcagttccttc 113093



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 84     tggcttcaaaagcttggaggtgccaaaaatcct 116
              |||||||||||| | |||||||| |||||||||
Sbjct: 113234 tggcttcaaaagttaggaggtgcgaaaaatcct 113266
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>emb|Y12618.1|PSPPF1 Pisum sativum mRNA for PPF-1 protein
          Length = 1523

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 49   ttacaaataatgtccttagcagtgcacaacaagt 82
            |||||||||||||||||||||  || ||||||||
Sbjct: 997  ttacaaataatgtccttagcacagctcaacaagt 1030
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>emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 on chromosome 3,
             complete sequence
          Length = 133240

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 3     ggttattttgctctttccgttccttc 28
             ||||||||||||||||| ||||||||
Sbjct: 36233 ggttattttgctctttcagttccttc 36258



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 84    tggcttcaaaagcttggaggtgccaaaaatcct 116
             |||||||||||| | |||||||| |||||||||
Sbjct: 36399 tggcttcaaaagttaggaggtgcgaaaaatcct 36431
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>ref|NM_104006.1| Arabidopsis thaliana transmembrane receptor AT1G51280 transcript
           variant AT1G51280.1 mRNA, complete cds
          Length = 723

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 545 caatgctgcctcccccacggacgat 569
           ||||||||||||| |||||||||||
Sbjct: 33  caatgctgcctcctccacggacgat 57
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>ref|NM_001036092.1| Arabidopsis thaliana transmembrane receptor AT1G51280 transcript
           variant AT1G51280.2 mRNA, complete cds
          Length = 818

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 545 caatgctgcctcccccacggacgat 569
           ||||||||||||| |||||||||||
Sbjct: 33  caatgctgcctcctccacggacgat 57
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>gb|BT015497.1| Arabidopsis thaliana At1g51280 mRNA sequence
          Length = 720

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 545 caatgctgcctcccccacggacgat 569
           ||||||||||||| |||||||||||
Sbjct: 30  caatgctgcctcctccacggacgat 54
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>gb|AC006673.1| Caenorhabditis elegans cosmid K09D9, complete sequence
          Length = 37242

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 260   tggaaggtttaagaaattaatggaa 284
             ||||||||| |||||||||||||||
Sbjct: 21765 tggaaggttcaagaaattaatggaa 21789
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>ref|XM_390373.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG10197.1)
            partial mRNA
          Length = 1683

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  attttgacggctctgctccag 384
            |||||||||||||||||||||
Sbjct: 1440 attttgacggctctgctccag 1420
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>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence
          Length = 185938

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 251    gcagcgtggtggaaggtttaagaaa 275
              ||||||||||||||| |||||||||
Sbjct: 155114 gcagcgtggtggaagctttaagaaa 155138
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>gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217080

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 528    agccattcttcagtaagcaat 548
              |||||||||||||||||||||
Sbjct: 100948 agccattcttcagtaagcaat 100928
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>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence
          Length = 153726

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   ctctcccaaaagctggtaaac 216
             |||||||||||||||||||||
Sbjct: 51429 ctctcccaaaagctggtaaac 51449
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>gb|AC022730.7| Homo sapiens chromosome 8, clone RP11-333A23, complete sequence
          Length = 155468

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    ctctcccaaaagctggtaaac 216
              |||||||||||||||||||||
Sbjct: 111961 ctctcccaaaagctggtaaac 111981
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>dbj|AK221479.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-42-B22
          Length = 1217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 545 caatgctgcctcccccacggacgat 569
           ||||||||||||| |||||||||||
Sbjct: 423 caatgctgcctcctccacggacgat 447
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>emb|AJ297606.1|PSA297606 Pisum sativum mRNA for PPF-1 protein
          Length = 1342

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  ttacaaataatgtccttagca 69
           |||||||||||||||||||||
Sbjct: 959 ttacaaataatgtccttagca 979
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>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    aagtgtggcttcaaaagcttg 99
             |||||||||||||||||||||
Sbjct: 78098 aagtgtggcttcaaaagcttg 78078
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>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete
             sequence
          Length = 105807

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 545   caatgctgcctcccccacggacgat 569
             ||||||||||||| |||||||||||
Sbjct: 62312 caatgctgcctcctccacggacgat 62336
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>gb|AC110908.13| Mus musculus chromosome 7, clone RP24-181E10, complete sequence
          Length = 173230

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   cccaaacagaagcacagaag 495
             ||||||||||||||||||||
Sbjct: 27893 cccaaacagaagcacagaag 27874
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>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence
          Length = 195587

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    cccaaacagaagcacagaag 495
              ||||||||||||||||||||
Sbjct: 188803 cccaaacagaagcacagaag 188784
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>gb|AC151969.3| Mus musculus BAC clone RP24-255B1 from chromosome 9, complete sequence
          Length = 192458

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    aacaaacgaaacaaacagaa 332
              ||||||||||||||||||||
Sbjct: 103317 aacaaacgaaacaaacagaa 103298
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>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence
          Length = 208710

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    agatgaacagggggaatcccatga 415
              ||||| ||||||||||||||||||
Sbjct: 130628 agatggacagggggaatcccatga 130605
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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    ggctctgctccagacagcaa 391
              ||||||||||||||||||||
Sbjct: 145642 ggctctgctccagacagcaa 145661
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>emb|AL358792.24| Human DNA sequence from clone RP11-280M4 on chromosome 9 Contains the
             5' end of the ASTN2 gene for astrotactin2 (KIAA0364) and a
             CpG island, complete sequence
          Length = 166931

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   gaaaacaacttctggaacaa 317
             ||||||||||||||||||||
Sbjct: 53865 gaaaacaacttctggaacaa 53846
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>emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chromosome 11, complete
             sequence
          Length = 48352

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   aaacaaacagaagagtcaag 340
             ||||||||||||||||||||
Sbjct: 38044 aaacaaacagaagagtcaag 38025
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>gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, complete sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 483   agaagcacagaagagggaacaatt 506
             |||| |||||||||||||||||||
Sbjct: 23989 agaaccacagaagagggaacaatt 24012
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>dbj|AK164409.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230011K04 product:unclassifiable, full
            insert sequence
          Length = 2350

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  aacaaacgaaacaaacagaa 332
            ||||||||||||||||||||
Sbjct: 2326 aacaaacgaaacaaacagaa 2345
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>emb|AL626778.12| Mouse DNA sequence from clone RP23-326E2 on chromosome 4, complete
              sequence
          Length = 186208

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    aagcatgaacctgctgataagagg 191
              ||||||| ||||||||||||||||
Sbjct: 178338 aagcatgcacctgctgataagagg 178315
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>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence
          Length = 189712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    aagaaattaatggaacaaga 289
              ||||||||||||||||||||
Sbjct: 142172 aagaaattaatggaacaaga 142191
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>gb|AC010903.8| Homo sapiens BAC clone RP11-550H9 from 2, complete sequence
          Length = 91723

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   agaagagggaacaattcagg 510
             ||||||||||||||||||||
Sbjct: 60435 agaagagggaacaattcagg 60454
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>gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosome unknown, complete
              sequence
          Length = 211031

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    cccaaacagaagcacagaag 495
              ||||||||||||||||||||
Sbjct: 119747 cccaaacagaagcacagaag 119766
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>gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosome 7, complete sequence
          Length = 186014

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    cccaaacagaagcacagaag 495
              ||||||||||||||||||||
Sbjct: 158492 cccaaacagaagcacagaag 158511
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>emb|BX000534.11| Zebrafish DNA sequence from clone DKEY-26G8 in linkage group 12, complete
              sequence
          Length = 199670

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    aacaaacgaaacaaacagaa 332
              ||||||||||||||||||||
Sbjct: 143466 aacaaacgaaacaaacagaa 143485
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>emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on chromosome 4, complete
              sequence
          Length = 181033

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    aagcatgaacctgctgataagagg 191
              ||||||| ||||||||||||||||
Sbjct: 141021 aagcatgcacctgctgataagagg 140998
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>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174442

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    cccaaacagaagcacagaagaggg 499
              ||||||||||||||||||| ||||
Sbjct: 154230 cccaaacagaagcacagaacaggg 154253
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>dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-721F8, complete
             sequence
          Length = 161871

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   ttcttcagtaagcaatgctg 552
             ||||||||||||||||||||
Sbjct: 80097 ttcttcagtaagcaatgctg 80078
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>emb|AL627304.16| Mouse DNA sequence from clone RP23-285N14 on chromosome 4, complete
             sequence
          Length = 98133

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   aagcatgaacctgctgataagagg 191
             ||||||| ||||||||||||||||
Sbjct: 92932 aagcatgcacctgctgataagagg 92955
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>gb|AC002980.1|AC002980 Homo sapiens Xp22 BAC 620F15 (Genome Systems BAC library) complete
              sequence
          Length = 141475

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    cagaagcacagaagagggaa 501
              ||||||||||||||||||||
Sbjct: 128345 cagaagcacagaagagggaa 128364
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>emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-73E17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 141534

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 476   cccaaacagaagcacagaagaggg 499
             ||||||||||||||||||| ||||
Sbjct: 38183 cccaaacagaagcacagaacaggg 38206
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>emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chromosome 4, complete
             sequence
          Length = 108136

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 168   aagcatgaacctgctgataagagg 191
             ||||||| ||||||||||||||||
Sbjct: 33035 aagcatgcacctgctgataagagg 33012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,732,563
Number of Sequences: 3902068
Number of extensions: 5732563
Number of successful extensions: 101177
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101069
Number of HSP's gapped (non-prelim): 108
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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