ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baalb12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 258 bits (130), Expect = 2e-65 Identities = 289/342 (84%) Strand = Plus / Plus Query: 103 tgggcattcaccttcggcctgctaggcaacgtcatctctttctcgagcctcctggccccg 162 ||||| ||| |||| || || ||||||||| ||||||| ||| || | ||||||||| Sbjct: 257 tgggccttcgcctttggtctcctaggcaacatcatctccttcatgacctacctggcccca 316 Query: 163 ataccaacattctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccc 222 | || || |||||| |||||| ||||||||| || ||| |||||||||||||||| ||| Sbjct: 317 ctgccgacgttctacaggatctacaagagcaagtcgacgcaggggttccagtcggtaccc 376 Query: 223 tatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggc 282 || || ||||| || |||||||||||||||||||||| |||||||||| ||||| ||| | Sbjct: 377 tacgtggtggcgctgttcagcgcgatgctgtggatctactacgcgctgctcaagtccgac 436 Query: 283 gagggcctcctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatc 342 ||| |||||||||||||||||||| | || |||||||||||||||||| |||||||| | Sbjct: 437 gagtgcctcctcatcaccatcaactccgctggctgcgtcatcgagaccatctacatcgcc 496 Query: 343 atgtacctcgtctacgcccccaggaaggccaagattttcacagccaagatcgtcctcctc 402 | ||||||||||||||||||| |||||||||||| ||||| |||||| || |||||||| Sbjct: 497 gtctacctcgtctacgcccccaagaaggccaagatgttcaccgccaagctcctcctcctc 556 Query: 403 ctcaacatcgccggcttcgggctcattttcgtcctcaccctc 444 ||||| ||| || |||||| ||||| || ||||||||||| Sbjct: 557 gtcaacgtcggcgtcttcggcctcatcctcctcctcaccctc 598 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 488 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 537 ||||||| ||||||||||| ||||||||||||| || || ||||||||| Sbjct: 642 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatc 691
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 256 bits (129), Expect = 7e-65 Identities = 237/273 (86%) Strand = Plus / Minus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 |||||| |||||| ||||||||| || ||| |||||||||||||||| ||||| || ||| Sbjct: 82558 ttctacaggatctacaagagcaagtcgacgcaggggttccagtcggtaccctacgtggtg 82499 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||||||||||||||||| |||||||||| ||||| ||| |||| ||||| Sbjct: 82498 gcgctgttcagcgcgatgctgtggatctactacgcgctgctcaagtccgacgagtgcctc 82439 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||| | || |||||||||||||||||| |||||||| | | |||||| Sbjct: 82438 ctcatcaccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctc 82379 Query: 352 gtctacgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatc 411 ||||||||||||| |||||||||||| ||||| |||||| || |||||||| ||||| || Sbjct: 82378 gtctacgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtc 82319 Query: 412 gccggcttcgggctcattttcgtcctcaccctc 444 | || |||||| ||||| || ||||||||||| Sbjct: 82318 ggcgtcttcggcctcatcctcctcctcaccctc 82286 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 488 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 538 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 82242 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 82192
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 256 bits (129), Expect = 7e-65 Identities = 237/273 (86%) Strand = Plus / Minus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 |||||| |||||| ||||||||| || ||| |||||||||||||||| ||||| || ||| Sbjct: 17574747 ttctacaggatctacaagagcaagtcgacgcaggggttccagtcggtaccctacgtggtg 17574688 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||||||||||||||||| |||||||||| ||||| ||| |||| ||||| Sbjct: 17574687 gcgctgttcagcgcgatgctgtggatctactacgcgctgctcaagtccgacgagtgcctc 17574628 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||| | || |||||||||||||||||| |||||||| | | |||||| Sbjct: 17574627 ctcatcaccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctc 17574568 Query: 352 gtctacgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatc 411 ||||||||||||| |||||||||||| ||||| |||||| || |||||||| ||||| || Sbjct: 17574567 gtctacgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtc 17574508 Query: 412 gccggcttcgggctcattttcgtcctcaccctc 444 | || |||||| ||||| || ||||||||||| Sbjct: 17574507 ggcgtcttcggcctcatcctcctcctcaccctc 17574475 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 488 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 538 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17574431 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17574381
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 256 bits (129), Expect = 7e-65 Identities = 237/273 (86%) Strand = Plus / Minus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 |||||| |||||| ||||||||| || ||| |||||||||||||||| ||||| || ||| Sbjct: 17668571 ttctacaggatctacaagagcaagtcgacgcaggggttccagtcggtaccctacgtggtg 17668512 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||||||||||||||||| |||||||||| ||||| ||| |||| ||||| Sbjct: 17668511 gcgctgttcagcgcgatgctgtggatctactacgcgctgctcaagtccgacgagtgcctc 17668452 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||| | || |||||||||||||||||| |||||||| | | |||||| Sbjct: 17668451 ctcatcaccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctc 17668392 Query: 352 gtctacgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatc 411 ||||||||||||| |||||||||||| ||||| |||||| || |||||||| ||||| || Sbjct: 17668391 gtctacgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtc 17668332 Query: 412 gccggcttcgggctcattttcgtcctcaccctc 444 | || |||||| ||||| || ||||||||||| Sbjct: 17668331 ggcgtcttcggcctcatcctcctcctcaccctc 17668299 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 488 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 538 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17668255 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17668205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 10762356 agaccggcgagggcctcctc 10762337
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 246 bits (124), Expect = 6e-62 Identities = 184/204 (90%) Strand = Plus / Minus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 ||||||||||||| ||||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 17344858 ttctaccggatctacaagagcaagtcgacggaggggttccagtcggtgccgtacgtggtg 17344799 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||| |||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 17344798 gcgctcttcagcgccatgctgtggatcttctacgcgctgatcaagtccaacgaggccctc 17344739 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 17344738 ctcatcaccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctc 17344679 Query: 352 gtctacgcccccaggaaggccaag 375 | ||||||||||| |||||||||| Sbjct: 17344678 gcctacgcccccaagaaggccaag 17344655 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 466 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 525 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17344323 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17344264 Query: 526 ctcagcatcatcg 538 ||||||||||||| Sbjct: 17344263 ctcagcatcatcg 17344251
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 246 bits (124), Expect = 6e-62 Identities = 184/204 (90%) Strand = Plus / Minus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 ||||||||||||| ||||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 17299229 ttctaccggatctacaagagcaagtcgacggaggggttccagtcggtgccgtacgtggtg 17299170 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||| |||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 17299169 gcgctcttcagcgccatgctgtggatcttctacgcgctgatcaagtccaacgaggccctc 17299110 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 17299109 ctcatcaccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctc 17299050 Query: 352 gtctacgcccccaggaaggccaag 375 | ||||||||||| |||||||||| Sbjct: 17299049 gcctacgcccccaagaaggccaag 17299026 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 466 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 525 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17298694 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17298635 Query: 526 ctcagcatcatcg 538 ||||||||||||| Sbjct: 17298634 ctcagcatcatcg 17298622
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154826 Score = 246 bits (124), Expect = 6e-62 Identities = 184/204 (90%) Strand = Plus / Plus Query: 172 ttctaccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtg 231 ||||||||||||| ||||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 58511 ttctaccggatctacaagagcaagtcgacggaggggttccagtcggtgccgtacgtggtg 58570 Query: 232 gccctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctc 291 || || |||||||| |||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 58571 gcgctcttcagcgccatgctgtggatcttctacgcgctgatcaagtccaacgaggccctc 58630 Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctc 351 ||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 58631 ctcatcaccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctc 58690 Query: 352 gtctacgcccccaggaaggccaag 375 | ||||||||||| |||||||||| Sbjct: 58691 gcctacgcccccaagaaggccaag 58714 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 466 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 525 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 59046 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 59105 Query: 526 ctcagcatcatcg 538 ||||||||||||| Sbjct: 59106 ctcagcatcatcg 59118
>gb|AY105872.1| Zea mays PCO079046 mRNA sequence Length = 1346 Score = 228 bits (115), Expect = 2e-56 Identities = 238/279 (85%) Strand = Plus / Plus Query: 115 ttcggcctgctaggcaacgtcatctctttctcgagcctcctggccccgataccaacattc 174 ||||| || ||||| ||||||||||| ||| || | |||||||||||||||| || ||| Sbjct: 281 ttcggtctactaggtaacgtcatctccttcatgaccttcctggccccgataccgacgttc 340 Query: 175 taccggatcttcaagagcaaatccacggaggggttccagtcggtgccctatgtcgtggcc 234 ||||| |||| ||||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 341 taccgcatctacaagagcaagtcgacggaaggcttccagtcggttccctacgtggttgcc 400 Query: 235 ctattcagcgcgatgctgtggatcttctacgcgctggtcaagaccggcgagggcctcctc 294 || |||||||| |||||||||||||||||||| ||| ||||| || |||| | ||||| Sbjct: 401 ctgttcagcgccatgctgtggatcttctacgcactgatcaagtccaacgagaccttcctc 460 Query: 295 atcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtc 354 |||||||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 461 atcaccatcaacgccgccggctgcgtcatcgagaccatctacgtcgtcatgtacttcgtc 520 Query: 355 tacgcccccaggaaggccaagattttcacagccaagatc 393 ||||| |||| ||| |||||| | ||||| ||||||||| Sbjct: 521 tacgcgcccaagaaagccaagctgttcacggccaagatc 559 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 481 ggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcat 536 |||||||||||||||||||||||||| | |||||||||||||| || |||||||| Sbjct: 647 ggctggatctgcgtcggcttctccgtcagtgtcttcgtcgcgccactaagcatcat 702
>gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence Length = 1159 Score = 143 bits (72), Expect = 7e-31 Identities = 174/208 (83%), Gaps = 5/208 (2%) Strand = Plus / Plus Query: 201 ggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatctt 260 ||||||||||||||||||||| || || ||||| || |||||||| ||||||||||||| Sbjct: 7 ggaggggttccagtcggtgccgtacgtggtggcgctcttcagcgccatgctgtggatcta 66 Query: 261 ctacgcgctggtcaagaccggcgagggcctcctcatcaccatcaacgctgccggctgcgt 320 |||||||||| ||||| || |||| || ||||||||||||||| | ||||||||||| Sbjct: 67 ctacgcgctgctcaagtccaacgagttgctgctcatcaccatcaactccgccggctgcgt 126 Query: 321 catcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggccaagatttt 380 |||||||||| |||||||| | |||| ||||||| |||| ||||| ||| | || Sbjct: 127 catcgagaccctctacatc-----gcgcctcctctacgcgcccaacaaggcaaagctgtt 181 Query: 381 cacagccaagatcgtcctcctcctcaac 408 ||| ||||||||| |||||||||||||| Sbjct: 182 cacggccaagatcctcctcctcctcaac 209 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 478 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 537 ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 279 ctcggctgggtctgcgtcgccttctccgtcagcgtcttcgtcgcgccgctcagcatcatc 338
>ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1562 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 199 acggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatc 258 |||||||||||||||||| ||| || || ||| | || |||||| ||||||||||| Sbjct: 324 acggaggggttccagtcgacgccgtacgtggtgacgctcttcagctgcatgctgtggatg 383 Query: 259 ttctacgcgctggtcaagaccggcgagggcctcctcatcaccatcaacgctgccggctgc 318 | ||||||| | |||||| |||||| | || || |||||||||| | || || ||| Sbjct: 384 tactacgcgttcgtcaagtccggcgccgagctgctggtcaccatcaatggtgtggggtgc 443 Query: 319 gtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 364 |||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 444 gtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 489
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 199 acggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatc 258 |||||||||||||||||| ||| || || ||| | || |||||| ||||||||||| Sbjct: 18555532 acggaggggttccagtcgacgccgtacgtggtgacgctcttcagctgcatgctgtggatg 18555473 Query: 259 ttctacgcgctggtcaagaccggcgagggcctcctcatcaccatcaacgctgccggctgc 318 | ||||||| | |||||| |||||| | || || |||||||||| | || || ||| Sbjct: 18555472 tactacgcgttcgtcaagtccggcgccgagctgctggtcaccatcaatggtgtggggtgc 18555413 Query: 319 gtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 364 |||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 18555412 gtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 18555367 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 14051087 agaccggcgagggcctcctc 14051068
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 199 acggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatc 258 |||||||||||||||||| ||| || || ||| | || |||||| ||||||||||| Sbjct: 96671 acggaggggttccagtcgacgccgtacgtggtgacgctcttcagctgcatgctgtggatg 96612 Query: 259 ttctacgcgctggtcaagaccggcgagggcctcctcatcaccatcaacgctgccggctgc 318 | ||||||| | |||||| |||||| | || || |||||||||| | || || ||| Sbjct: 96611 tactacgcgttcgtcaagtccggcgccgagctgctggtcaccatcaatggtgtggggtgc 96552 Query: 319 gtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 364 |||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 96551 gtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 96506
>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full insert sequence Length = 1562 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 199 acggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatc 258 |||||||||||||||||| ||| || || ||| | || |||||| ||||||||||| Sbjct: 324 acggaggggttccagtcgacgccgtacgtggtgacgctcttcagctgcatgctgtggatg 383 Query: 259 ttctacgcgctggtcaagaccggcgagggcctcctcatcaccatcaacgctgccggctgc 318 | ||||||| | |||||| |||||| | || || |||||||||| | || || ||| Sbjct: 384 tactacgcgttcgtcaagtccggcgccgagctgctggtcaccatcaatggtgtggggtgc 443 Query: 319 gtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 364 |||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 444 gtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 489
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 316 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 375 Query: 274 aagacc 279 |||||| Sbjct: 376 aagacc 381 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 400 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 459 Query: 358 gc 359 || Sbjct: 460 gc 461
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA Length = 1517 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 317 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 376 Query: 274 aagacc 279 |||||| Sbjct: 377 aagacc 382 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 401 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 460 Query: 358 gc 359 || Sbjct: 461 gc 462
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 26720096 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 26720037 Query: 274 aagacc 279 |||||| Sbjct: 26720036 aagacc 26720031 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 26720012 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 26719953 Query: 358 gc 359 || Sbjct: 26719952 gc 26719951
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 131623 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 131564 Query: 274 aagacc 279 |||||| Sbjct: 131563 aagacc 131558 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 131539 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 131480 Query: 358 gc 359 || Sbjct: 131479 gc 131478
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 63438 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 63379 Query: 274 aagacc 279 |||||| Sbjct: 63378 aagacc 63373 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 63354 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 63295 Query: 358 gc 359 || Sbjct: 63294 gc 63293
>dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F06, full insert sequence Length = 1500 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 316 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 375 Query: 274 aagacc 279 |||||| Sbjct: 376 aagacc 381 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 400 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 459 Query: 358 gc 359 || Sbjct: 460 gc 461
>dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B21, full insert sequence Length = 1517 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 214 tcggtgccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgcgctggtc 273 |||||||| || || ||||| || |||||| || ||||||||||||||||||||||||| Sbjct: 317 tcggtgccgtacgtggtggcgctcttcagctcggtgctgtggatcttctacgcgctggtg 376 Query: 274 aagacc 279 |||||| Sbjct: 377 aagacc 382 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 298 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 357 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 401 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 460 Query: 358 gc 359 || Sbjct: 461 gc 462
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 291 cctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacct 350 |||| ||||||||||||| |||||||||| ||||| ||| ||||||| | | ||||| Sbjct: 122028 cctcctcaccatcaacgccttcggctgcgtcgtcgaggccgcctacatcgccgtctacct 121969 Query: 351 cgtctacgcccccagg 366 |||||||||||||||| Sbjct: 121968 cgtctacgcccccagg 121953
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 291 cctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacct 350 |||| ||||||||||||| |||||||||| ||||| ||| ||||||| | | ||||| Sbjct: 19402802 cctcctcaccatcaacgccttcggctgcgtcgtcgaggccgcctacatcgccgtctacct 19402743 Query: 351 cgtctacgcccccagg 366 |||||||||||||||| Sbjct: 19402742 cgtctacgcccccagg 19402727
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence Length = 1762 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 247 atgctgtggatcttctacgcgctggtcaagaccggcg 283 |||||||||||||||||||||||| ||||| |||||| Sbjct: 418 atgctgtggatcttctacgcgctgctcaagtccggcg 454
>gb|AY108458.1| Zea mays PCO137991 mRNA sequence Length = 991 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 488 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 538 ||||| ||| ||||||| || ||||||||||||||| ||||||||||||| Sbjct: 76 tctgcctcgccttctccatggccgtcttcgtcgcgccgctcagcatcatcg 126
>ref|NM_122271.2| Arabidopsis thaliana MTN3 AT5G23660 (MTN3) mRNA, complete cds Length = 1272 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 274 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 320
>gb|AY116672.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1124 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 271 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 317
>gb|AY059108.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 889 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 145 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 191
>gb|AY057575.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1279 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 274 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 320
>emb|BX832292.1|CNS0A172 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1121 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 246 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 292
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 52401 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 52355
>gb|AF095641.1|AF095641 Arabidopsis thaliana MTN3 homolog (MTN3) mRNA, complete cds Length = 1209 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 220 ccctatgtcgtggccctattcagcgcgatgctgtggatcttctacgc 266 |||||||| ||||| || |||||||||||||| ||| ||| |||||| Sbjct: 249 ccctatgtggtggcgctcttcagcgcgatgctttggctctactacgc 295
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 312 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 371 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 12981867 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 12981808 Query: 372 ca 373 || Sbjct: 12981807 ca 12981806
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 312 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 371 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 12978642 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 12978583 Query: 372 ca 373 || Sbjct: 12978582 ca 12978581
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 312 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 371 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 59565 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 59506 Query: 372 ca 373 || Sbjct: 59505 ca 59504
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full insert sequence Length = 1492 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 312 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 371 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 377 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 436 Query: 372 ca 373 || Sbjct: 437 ca 438
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 83 gcctatccatggagcacccttgggca 108 |||||||||||||||||||| ||||| Sbjct: 85669 gcctatccatggagcaccctagggca 85644
>gb|AC110532.16| Mus musculus chromosome 1, clone RP23-285O2, complete sequence Length = 180795 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tcactgttatatatctttgta 72 ||||||||||||||||||||| Sbjct: 68181 tcactgttatatatctttgta 68161
>gb|BT017750.1| Zea mays clone EL01N0450B09.c mRNA sequence Length = 1251 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 199 acggaggggttccagtcggtgccctatgtcgtggccctattcagcgcgatgctgtggatc 258 |||||||||||| |||||||| || || ||||| || |||||| | |||||||||| Sbjct: 258 acggaggggttcagctcggtgccgtacgtggtggctctgttcagctgcacgctgtggatc 317 Query: 259 ttctacgcgctggtcaagacc 279 | ||||||||||| |||||| Sbjct: 318 ctgtacgcgctggtgaagacc 338
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcgagggc 288 ||||||||||||||||||| ||||| Sbjct: 124258 cgcgctggtcaagaccggccagggc 124282 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcgagggc 288 ||||||||||||||||||| ||||| Sbjct: 123454 cgcgctggtcaagaccggccagggc 123478 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcgagggc 288 ||||||||||||||||||| ||||| Sbjct: 122110 cgcgctggtcaagaccggccagggc 122134 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcg 283 |||||||||||||||||||| Sbjct: 121849 cgcgctggtcaagaccggcg 121868
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcgagggc 288 ||||||||||||||||||| ||||| Sbjct: 126071 cgcgctggtcaagaccggccagggc 126095 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgcgctggtcaagaccggcg 283 |||||||||||||||||||| Sbjct: 125810 cgcgctggtcaagaccggcg 125829
>gb|AC008685.8| Homo sapiens chromosome 5 clone CTB-59H21, complete sequence Length = 159713 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 accgtctacatcatcatgtac 348 ||||||||||||||||||||| Sbjct: 123582 accgtctacatcatcatgtac 123602
>gb|AC010591.10| Homo sapiens chromosome 5 clone CTC-447K7, complete sequence Length = 172745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 accgtctacatcatcatgtac 348 ||||||||||||||||||||| Sbjct: 26888 accgtctacatcatcatgtac 26908
>ref|NM_124458.1| Arabidopsis thaliana unknown protein AT5G50800 mRNA, complete cds Length = 1252 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatc 339 ||||||||||| |||||| || ||||||||||| ||| |||||||| Sbjct: 378 ctcatcaccataaacgcttttggatgcgtcatcgaaaccatctacatc 425
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 ctcaacatcgccggcttcgg 422 |||||||||||||||||||| Sbjct: 363989 ctcaacatcgccggcttcgg 363970
>ref|XM_365032.1| Magnaporthe grisea 70-15 hypothetical protein (MG09877.4) partial mRNA Length = 8238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gcgtcttcgtcgcgcctctc 528 |||||||||||||||||||| Sbjct: 716 gcgtcttcgtcgcgcctctc 697
>gb|AC008591.6|AC008591 Homo sapiens chromosome 5 clone CTC-575N7, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cattcaccttcggcctgcta 126 |||||||||||||||||||| Sbjct: 85278 cattcaccttcggcctgcta 85297
>ref|XM_392794.2| PREDICTED: Apis mellifera similar to CG32676-PA (LOC409273), mRNA Length = 2710 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 atcgtcctcctcctcaacatcgcc 414 ||||||||||||||| |||||||| Sbjct: 919 atcgtcctcctcctccacatcgcc 942
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 acgtcatctctttctcgagc 150 |||||||||||||||||||| Sbjct: 296138 acgtcatctctttctcgagc 296119
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 1241550 agaccggcgagggcctcctc 1241569
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gatgctgtggatcttctacgcgct 269 ||||||||||||||||| |||||| Sbjct: 2799007 gatgctgtggatcttctgcgcgct 2798984
>gb|AY087516.1| Arabidopsis thaliana clone 36264 mRNA, complete sequence Length = 1252 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatc 339 ||||||||||| |||||| || ||||||||||| ||| |||||||| Sbjct: 378 ctcatcaccataaacgcttttggatgcgtcatcgaaaccatctacatc 425
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 acgtcatctctttctcgagc 150 |||||||||||||||||||| Sbjct: 131002 acgtcatctctttctcgagc 130983
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 acgtcatctctttctcgagc 150 |||||||||||||||||||| Sbjct: 20376 acgtcatctctttctcgagc 20357
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 acgtcatctctttctcgagc 150 |||||||||||||||||||| Sbjct: 48137 acgtcatctctttctcgagc 48118
>dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1287_H05 Length = 97812 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 32597 agaccggcgagggcctcctc 32578
>dbj|AB025617.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K7B16 Length = 26721 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 292 ctcatcaccatcaacgctgccggctgcgtcatcgagaccgtctacatc 339 ||||||||||| |||||| || ||||||||||| ||| |||||||| Sbjct: 4779 ctcatcaccataaacgcttttggatgcgtcatcgaaaccatctacatc 4732
>dbj|AK065640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038P06, full insert sequence Length = 2191 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 317 agaccggcgagggcctcctc 336
>gb|AY900120.1| Oryza sativa (japonica cultivar-group) SNAP1 (SNAP1) mRNA, complete cds Length = 1014 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agaccggcgagggcctcctc 294 |||||||||||||||||||| Sbjct: 96 agaccggcgagggcctcctc 115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,109,183 Number of Sequences: 3902068 Number of extensions: 4109183 Number of successful extensions: 72700 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72066 Number of HSP's gapped (non-prelim): 629 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
