Clone Information

BLAST Search Result

Clone Name	baala20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	OPDA_ECOLI (P27298) Oligopeptidase A (EC 3.4.24.70)	96	1e-26
2	OPDA_SALTY (P27237) Oligopeptidase A (EC 3.4.24.70)	96	2e-26
3	OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70)	105	9e-23
4	MEPD_PIG (P47788) Thimet oligopeptidase (EC 3.4.24.15) (Endopept...	34	0.42
5	Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor	33	0.54
6	GAS8_MOUSE (Q60779) Growth-arrest-specific protein 8 (Growth arr...	33	0.54
7	MEPD_RAT (P24155) Thimet oligopeptidase (EC 3.4.24.15) (Endo-oli...	33	0.71
8	MCRY_METTH (P21111) Methyl-coenzyme M reductase II beta subunit ...	33	0.71
9	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	33	0.93
10	RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabapt...	33	0.93
11	RDRP_RCNMV (P22956) Putative RNA-directed RNA polymerase (EC 2.7...	33	0.93
12	GAS8_HUMAN (O95995) Growth-arrest-specific protein 8 (Growth arr...	32	1.6
13	RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death ...	32	2.1
14	NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA	32	2.1
15	CEA1_SHISO (P21178) Colicin-E1*	32	2.1
16	CWC26_YARLI (Q6CAX1) Pre-mRNA-splicing factor CWC26	31	2.7
17	MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ...	31	2.7
18	RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Raba...	31	2.7
19	UGTAP_MOUSE (Q6P6M7) UGA suppressor tRNA-associated protein	31	2.7
20	CING_HUMAN (Q9P2M7) Cingulin	31	2.7
21	SYA_VIBVY (Q7MHR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	31	2.7
22	SYA_VIBVU (Q8DC49) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	31	2.7
23	MEPD_HUMAN (P52888) Thimet oligopeptidase (EC 3.4.24.15) (Endope...	31	3.5
24	MFP1_LYCES (P93203) MAR binding filament-like protein 1	31	3.5
25	RAB1A_RAT (Q6NYB7) Ras-related protein Rab-1A	30	4.6
26	RAB1A_MOUSE (P62821) Ras-related protein Rab-1A (YPT1-related pr...	30	4.6
27	RAB1A_HUMAN (P62820) Ras-related protein Rab-1A (YPT1-related pr...	30	4.6
28	RAB1A_CANFA (P62822) Ras-related protein Rab-1A	30	4.6
29	GRPE_PSYS1 (Q9L516) Protein grpE (HSP-70 cofactor)	30	4.6
30	RAB1A_LYMST (Q05974) Ras-related protein Rab-1A	30	4.6
31	FRZCD_MYXXA (P43500) Frizzy aggregation protein frzCD	30	4.6
32	RRF_IDILO (Q5QXS3) Ribosome recycling factor (Ribosome-releasing...	30	4.6
33	RAB1_DISOM (P22125) Ras-related protein ORAB-1	30	4.6
34	GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macr...	30	6.0
35	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	30	6.0
36	DCE1_PIG (P48319) Glutamate decarboxylase 1 (EC 4.1.1.15) (Gluta...	30	6.0
37	SECA_STACA (P47994) Preprotein translocase secA subunit	30	6.0
38	MBB1A_BRARE (Q6DRL5) Myb-binding protein 1A-like protein	30	6.0
39	DCE1_RAT (P18088) Glutamate decarboxylase 1 (EC 4.1.1.15) (Gluta...	30	6.0
40	DCE1_MOUSE (P48318) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	30	6.0
41	YPTV1_VOLCA (P31584) GTP-binding protein yptV1	30	7.9
42	DCE1_PONPY (Q5R7S7) Glutamate decarboxylase 1 (EC 4.1.1.15)	30	7.9
43	DCE1_PANTR (Q5IS68) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	30	7.9
44	DCE1_HUMAN (Q99259) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	30	7.9
45	DCE1_FELCA (P14748) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glu...	30	7.9
46	RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Raba...	30	7.9
47	UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein (tRN...	30	7.9

>OPDA_ECOLI (P27298) Oligopeptidase A (EC 3.4.24.70)|
          Length = 680

 Score = 95.9 bits (237), Expect(2) = 1e-26
 Identities = 50/140 (35%), Positives = 85/140 (60%)
 Frame = +2

Query: 215 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 394
           +GQ + +Y+A+  +R+   + +L+ A+K+ V+  ++D  L G+ L  E+++ + +I   L
Sbjct: 100 VGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRL 159

Query: 395 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 574
            +L  ++S NVLDAT  + KLVTD+ E+ G+P SAL  A   A +K  E        +++
Sbjct: 160 SELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEG-------YLL 212

Query: 575 TLDAPSFTAVMQHAKNRALR 634
           TLD PS+  VM +  N+ALR
Sbjct: 213 TLDIPSYLPVMTYCDNQALR 232



 Score = 43.9 bits (102), Expect(2) = 1e-26
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +1

Query: 61  WERLVHPLERIVDRLDVVWNVVDHLKAVKDSPDLRSAVEDVQPEXSE 201
           WE L  PL  + D L  +++ V HL +VK+SP+LR A E   P  SE
Sbjct: 49  WENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSE 95

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>OPDA_SALTY (P27237) Oligopeptidase A (EC 3.4.24.70)|
          Length = 680

 Score = 96.3 bits (238), Expect(2) = 2e-26
 Identities = 49/140 (35%), Positives = 84/140 (60%)
 Frame = +2

Query: 215 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 394
           +GQ + +Y A+  +R+   + +L+ A+K+ V+  ++D  L G+ L  E+++ + +I   L
Sbjct: 100 VGQHEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRL 159

Query: 395 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 574
            +L  ++S NVLDAT  + KL+TD+ E+ G+P SAL  A   A +K  E        +++
Sbjct: 160 SELGNQYSNNVLDATMGWTKLITDEAELAGMPESALAAAKAQAEAKEQEG-------YLL 212

Query: 575 TLDAPSFTAVMQHAKNRALR 634
           TLD PS+  VM +  N+ALR
Sbjct: 213 TLDIPSYLPVMTYCDNQALR 232



 Score = 42.4 bits (98), Expect(2) = 2e-26
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 58  AWERLVHPLERIVDRLDVVWNVVDHLKAVKDSPDLRSAVEDVQPEXSE 201
           +WE L  PL    D L  +++ + HL +VK+SP+LR A E   P  SE
Sbjct: 48  SWENLCQPLAEADDVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSE 95

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>OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70)|
          Length = 681

 Score =  105 bits (263), Expect = 9e-23
 Identities = 55/140 (39%), Positives = 90/140 (64%)
 Frame = +2

Query: 215 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 394
           +GQ K +Y A+ A++NS+++   S A+K+ +E  ++D  L G+ L +E+++ + +I   L
Sbjct: 101 VGQHKGLYNAYLALKNSAEFADYSIAQKKAIENSLRDFELSGIGLSEEKQQRYGEIVARL 160

Query: 395 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 574
            +L+ +FS NVLDAT  +EKL+ ++ E+ GLP SAL  A Q+A SKG +        +  
Sbjct: 161 SELNSQFSNNVLDATMGWEKLIENEAELAGLPESALQAAQQSAESKGLKG-------YRF 213

Query: 575 TLDAPSFTAVMQHAKNRALR 634
           TL+ PS+  VM + +NRALR
Sbjct: 214 TLEIPSYLPVMTYCENRALR 233



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +1

Query: 61  WERLVHPLERIVDRLDVVWNVVDHLKAVKDSPDLRSAVEDVQPEXSE----ILPETGAEQ 228
           WE  + PL    DRL+  W+ V HL +VK+S +LR A +   P  SE    +    G   
Sbjct: 50  WENFILPLTETNDRLNRAWSPVSHLNSVKNSTELREAYQTCLPLLSEYSTWVGQHKGLYN 109

Query: 229 AYLRGLQRHQEF 264
           AYL  L+   EF
Sbjct: 110 AYL-ALKNSAEF 120

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>MEPD_PIG (P47788) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)|
          Length = 686

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 27/111 (24%), Positives = 49/111 (44%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  E +E    
Sbjct: 106 EFDVEMSMRQDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPKETQEKIKS 165

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSK 532
           I+++L  L   F++N+ + T     L   ++E+ GLP   L    +T   K
Sbjct: 166 IKKKLSLLCIDFNKNLNEDT---TFLPVTREELGGLPEDFLNSLEKTEDEK 213

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>Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor|
          Length = 296

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +2

Query: 293 RKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKK 472
           ++RV++   K+A   G   E+ ++E+  +I++E  K   +F  N+LDA   FEK +   K
Sbjct: 202 KERVIK---KEAQKRGKTPEEFKKELIRKIEEEKLKARSEFERNLLDA---FEKFLEKGK 255

Query: 473 EI 478
           EI
Sbjct: 256 EI 257

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>GAS8_MOUSE (Q60779) Growth-arrest-specific protein 8 (Growth arrest-specific|
           11)
          Length = 478

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = +2

Query: 290 ARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKK--FEKLVT 463
           AR +V E ++KD       LE      F ++QQE E+L  KF++ + +  +K  F+ L+ 
Sbjct: 312 ARLKVAERELKDLKWEHEVLEQR----FIKVQQEREELYRKFADAIQEVQQKTGFKNLLL 367

Query: 464 DKKEIDGLPASALGLAAQTAVSKGHENASAEN-GPWMITLDAPSFTAVMQHAKNRALR 634
           ++K        AL  A +    + +E  +A N  P  +TL +     V++ +KN  ++
Sbjct: 368 ERK------LQALNAAVEKREVQFNEVLAASNLDPTALTLVSRKLEDVLE-SKNTTIK 418

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>MEPD_RAT (P24155) Thimet oligopeptidase (EC 3.4.24.15) (Endo-oligopeptidase|
           A) (Endopeptidase 24.15) (PZ-peptidase) (Soluble
           metallo-endopeptidase)
          Length = 686

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 30/137 (21%), Positives = 58/137 (42%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  + +E    
Sbjct: 106 EFDVEMSMRQDVYQRVVWLQEKIPKDSLKPEAARYLERLIKLGRRNGLHLPQDTQEKIKN 165

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAEN 559
           I++ L  L   F++N+ + T     L   ++E+ GLP   L    +T           E+
Sbjct: 166 IKKRLSLLCIDFNKNLNEDT---TFLPFTREELGGLPEDFLNSLEKT-----------ED 211

Query: 560 GPWMITLDAPSFTAVMQ 610
           G   +TL  P +  +++
Sbjct: 212 GKLKVTLKYPHYFPLLK 228

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>MCRY_METTH (P21111) Methyl-coenzyme M reductase II beta subunit (EC 2.8.4.1)|
           (Coenzyme-B sulfoethylthiotransferase beta) (MCR II
           beta)
          Length = 442

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
 Frame = +2

Query: 239 EAFNAIRNSSDWDSLSDARKRV------VEGQIKDAVLGGVALEDEQREIFNQIQQELEK 400
           EA + ++N +  + +SD ++ V      +EG +K A LGG +     RE+   I +  E 
Sbjct: 24  EAVSPLKNPTIANLVSDVKRSVAVNLAGIEGSLKKAALGGKSNFIPGREVELPIVENAEA 83

Query: 401 LSEKFSENVL---DATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
           ++EK    V    D       +   ++ +  +P + +G+AA   VS
Sbjct: 84  IAEKVKRLVQTSEDDDTNIRLINNGQQILVQVPTTRMGVAADYTVS 129

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 19/74 (25%), Positives = 39/74 (52%)
 Frame = +2

Query: 341 VALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQT 520
           + LE+ ++E+  + Q E+E L  +F + + +   + EK+  DK + +    + L    Q 
Sbjct: 356 LCLENLRKELSAKHQSEMEDLQNQFQKELAEQRAELEKIFQDKNQAERALRN-LESHHQA 414

Query: 521 AVSKGHENASAENG 562
           A+ K  E+  +E+G
Sbjct: 415 AIEKLREDLQSEHG 428

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>RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F+LRL Q +  +  +   R S+D + ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERAQWAQY---RESADRE-IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 481
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221

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>RDRP_RCNMV (P22956) Putative RNA-directed RNA polymerase (EC 2.7.7.48)|
           [Contains: 27 kDa protein; 57 kDa protein]
          Length = 767

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +2

Query: 227 KPIYEAFNAIRN-SSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKL 403
           KPI  AF++I     +W      + ++++  + D V        E+R+++ +    LEK 
Sbjct: 319 KPIQNAFDSISYFREEWLRKLSHKGQILKSSLADVV---ACYSSEKRKLYQKAADSLEKK 375

Query: 404 SEKFSENVLDATKKFEKLVTDKKE 475
             ++ ++ + A  K EKL  D K+
Sbjct: 376 PVQWRDSKVQAFIKVEKLECDTKD 399

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>GAS8_HUMAN (O95995) Growth-arrest-specific protein 8 (Growth arrest-specific|
           11)
          Length = 478

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
 Frame = +2

Query: 290 ARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKK--FEKLV- 460
           AR +V E ++KD       LE      F ++QQE ++L  KF+  + +  +K  F+ LV 
Sbjct: 312 ARLKVREKELKDLQWEHEVLEQR----FTKVQQERDELYRKFTAAIQEVQQKTGFKNLVL 367

Query: 461 ----------TDKKEI---DGLPASALGLAAQTAVSKGHEN 544
                      +KKE+   + L AS L  AA T VS+  E+
Sbjct: 368 ERKLQALSAAVEKKEVQFNEVLAASNLDPAALTLVSRKLED 408

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>RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death protein 11)|
          Length = 1871

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 133  LKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRLG 276
            L++ + +P+ +S VED +    + + E    + Y+  +Q H  FFRLG
Sbjct: 1297 LRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLG 1344

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>NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA|
          Length = 892

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +2

Query: 239 EAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFS 418
           +AF+ +R     D+L D  + +V  + K +     A+  E+ +I    Q E E L+ K S
Sbjct: 112 DAFDLVRQIRSCDNLEDVAQSLVNQEKKSSGWLSNAVIHEENDIAQTDQFESE-LAGKMS 170

Query: 419 ENVLDATKKF 448
             VLD ++KF
Sbjct: 171 NLVLDGSRKF 180

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>CEA1_SHISO (P21178) Colicin-E1*|
          Length = 521

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
 Frame = +2

Query: 275 DSLSDARKRVVEGQIKDAVLGGVA----LEDEQREIFNQIQQEL-EKLSEKFSENVLDAT 439
           D+L  A+  ++  QIKDAV   V+    L ++  E ++++ QEL +K   K   NV +A 
Sbjct: 330 DNLKTAQTNLLNSQIKDAVDATVSFYQTLSEKYGEKYSKMAQELADKSKGKKISNVNEAL 389

Query: 440 KKFEK 454
             FEK
Sbjct: 390 AAFEK 394

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>CWC26_YARLI (Q6CAX1) Pre-mRNA-splicing factor CWC26|
          Length = 221

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = +2

Query: 257 RNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDA 436
           R    W +LS      VE  +     G +   D+Q  +  Q QQE E    +  EN+L A
Sbjct: 45  RAKGGWKTLSGKAIDPVEETVYRDASGNIISVDDQISVLQQRQQEKEAAERRKKENLLGA 104

Query: 437 TKKFEKLVTDKKE 475
            +  E      KE
Sbjct: 105 VQVEEARKRQAKE 117

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>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
 Frame = +2

Query: 227  KPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALE----DEQREIFNQIQQEL 394
            + I EA   +   S   + SD  ++ +E +I DA+   V  E    ++Q +   +I+ EL
Sbjct: 1958 REIVEAKGRLEEESIARTNSDRSRKRLEAEI-DALTAQVDAEQKAKNQQIKENKKIETEL 2016

Query: 395  EKLSEKFSENVLDATKKF---EKLVTDKK 472
            ++  +KF E+    TK+F   EKL TD K
Sbjct: 2017 KEYRKKFGESEKTKTKEFLVVEKLETDYK 2045

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>RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F+LRL Q +  +  +   R S++ + ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERAQWAQY---RESAERE-IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 481
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221

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>UGTAP_MOUSE (Q6P6M7) UGA suppressor tRNA-associated protein|
          Length = 504

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/89 (25%), Positives = 38/89 (42%)
 Frame = +2

Query: 356 EQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKG 535
           E++E+F  +  +L+KL+E  +E +L        L    K IDG    A+        ++ 
Sbjct: 340 ERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQ 399

Query: 536 HENASAENGPWMITLDAPSFTAVMQHAKN 622
              A A     + T+   +F   M HA N
Sbjct: 400 VSGARAVPLGNVQTVSGHTFRGFMSHADN 428

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
 Frame = +2

Query: 221  QSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLG-----------GVALEDE--Q 361
            + + + EA NA   S + +    A KR +E ++++A  G             ALE+E  Q
Sbjct: 767  EKQQLEEALNA---SQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQ 823

Query: 362  REIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKE 475
            RE+  + + ELE+        V    K+ EK+  D K+
Sbjct: 824  REVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQ 861

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>SYA_VIBVY (Q7MHR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 287 DARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTD 466
           DA+ R  E +++DA     +LE E       IQQ  +KL+ + S N++D  K+   +   
Sbjct: 707 DAQARKFEEKLQDAANKAKSLEKE-------IQQLKDKLASQASANLIDQVKEIAGVKVL 759

Query: 467 KKEIDGLPASAL 502
             ++DG    AL
Sbjct: 760 VAKLDGADNKAL 771

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>SYA_VIBVU (Q8DC49) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 287 DARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTD 466
           DA+ R  E +++DA     +LE E       IQQ  +KL+ + S N++D  K+   +   
Sbjct: 707 DAQARKFEEKLQDAANKAKSLEKE-------IQQLKDKLASQASANLIDQVKEIAGVKVL 759

Query: 467 KKEIDGLPASAL 502
             ++DG    AL
Sbjct: 760 VAKLDGADNKAL 771

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>MEPD_HUMAN (P52888) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)|
           (MP78)
          Length = 688

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 30/137 (21%), Positives = 58/137 (42%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  E +E   +
Sbjct: 106 EFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKR 165

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAEN 559
           I+++L  L   F++N+ + T     L    +E+ GLP   L           +     E+
Sbjct: 166 IKKKLSLLCIDFNKNLNEDT---TFLPFTLQELGGLPEDFL-----------NSLEKMED 211

Query: 560 GPWMITLDAPSFTAVMQ 610
           G   +TL  P +  +++
Sbjct: 212 GKLKVTLKYPHYFPLLK 228

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>MFP1_LYCES (P93203) MAR binding filament-like protein 1|
          Length = 697

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 275 DSLSDARKRVVE--GQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKF 448
           +SL +  + V+    +++ A     +LEDE RE+  Q   E +++S++  EN+ DA    
Sbjct: 579 ESLDEINRNVLALAEELELATSRNSSLEDE-REVHRQSVSEQKQISQEAQENLEDAHSLV 637

Query: 449 EKLVTDKKEIDGLPASALGLAAQTAVSKG 535
            KL    KE + L   A  L  + A +KG
Sbjct: 638 MKL---GKERESLEKRAKKLEDEMAAAKG 663

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>RAB1A_RAT (Q6NYB7) Ras-related protein Rab-1A|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_MOUSE (P62821) Ras-related protein Rab-1A (YPT1-related protein)|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_HUMAN (P62820) Ras-related protein Rab-1A (YPT1-related protein)|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_CANFA (P62822) Ras-related protein Rab-1A|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>GRPE_PSYS1 (Q9L516) Protein grpE (HSP-70 cofactor)|
          Length = 199

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
 Frame = +2

Query: 254 IRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLS----EKFSE 421
           I N  D D+   AR   +EG++K+A  G      E  +   +++QE +K      +KF+ 
Sbjct: 46  IENEIDLDTFK-ARIAELEGEVKEAKEGTARANAEAYDAQKRMEQEADKSKKFALQKFAR 104

Query: 422 NVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHEN 544
            +L+     E+ + +    D + A  + L  +  ++  H+N
Sbjct: 105 ELLEIVDNLERAIENADANDPV-AEGVQLTHKALLAVLHKN 144

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>RAB1A_LYMST (Q05974) Ras-related protein Rab-1A|
          Length = 205

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 65  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 125 KSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATN 160

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>FRZCD_MYXXA (P43500) Frizzy aggregation protein frzCD|
          Length = 417

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 371 FNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHE 541
           F+ +  E+ +L+E    NVLD+TK+ + L+T+ +E     A A   A+++A   G +
Sbjct: 281 FSIVAAEMRRLAE----NVLDSTKEIKNLITEIREATAAAAGA-AEASKSATESGEK 332

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>RRF_IDILO (Q5QXS3) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 185

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +2

Query: 296 KRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFE 451
           +R   G IKD +      EDE+R      ++E++KL++KF + + +A K  E
Sbjct: 132 RRDANGDIKDLLKEKEITEDEERN----AEEEIQKLTDKFVKQIDEALKAKE 179

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>RAB1_DISOM (P22125) Ras-related protein ORAB-1|
          Length = 202

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 433
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 62  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121

Query: 434 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 529
                TKK     T K+  D L    L  +A+ A +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 157

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>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
 Frame = +2

Query: 215  LGQSKPIYEAFNAIRNSSD--WDSLSDARKRV-VEGQIKDAVLGGVALEDEQRE-IFNQI 382
            L ++K + E  +  R + +    SL+D   +V  + + KD VLG +AL  E+R+ +  ++
Sbjct: 1496 LKENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEKDTVLGRLALLQEERDKLITEM 1555

Query: 383  QQELEKLSEKFSENVLDATKKFEKLVTDK----KEIDGLPASALGLAAQTAVSKGHENAS 550
             + L + ++  S +        E L  DK    KEI+ L +S   +A  T   + H+   
Sbjct: 1556 DRSLLE-NQSLSSSCESLKLALEGLTEDKEKLVKEIESLKSSK--IAESTEWQEKHKELQ 1612

Query: 551  AE 556
             E
Sbjct: 1613 KE 1614

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein p162)|
            (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +2

Query: 260  NSSDWDSLSDARKRVVE---GQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFS---E 421
            N ++    S+ +K+ +E   G++K AVL    LE++ ++   Q  QEL    EK S    
Sbjct: 960  NINELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQN 1019

Query: 422  NVLDATKKFEKLVTD 466
            N   + + F++L +D
Sbjct: 1020 NYEKSQETFKQLQSD 1034

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>DCE1_PIG (P48319) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP+ R  +  V P+   ++ E+G      +       FFR+
Sbjct: 516 WYIPQSLRGVPDSPERREKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRM 568

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>SECA_STACA (P47994) Preprotein translocase secA subunit|
          Length = 844

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +2

Query: 308 EGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDG 484
           EG++K+  + G   + E  +IF+ +  ++EK  E    N+ D   +FE+++   + IDG
Sbjct: 672 EGEVKEDEIKGKGKDRE--DIFDTVWAKIEKAYEAQKANIPDQFNEFERMIL-LRSIDG 727

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>MBB1A_BRARE (Q6DRL5) Myb-binding protein 1A-like protein|
          Length = 1269

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 227 KPIYEAFNAIRNSSDWDSLSDARKRVVEG---QIKDAVLGGVALEDEQREIFNQIQQELE 397
           K I +  N ++NS   D L    KR+V+G     +DA  G      +   +F +I  +  
Sbjct: 51  KAIEDLINYLKNSEQADELKYTLKRLVDGLSHTREDARSGYSVALAQLLSVFEEISLKST 110

Query: 398 KLSEKFSENVLDATKK 445
             S K   N+L A+KK
Sbjct: 111 LNSVKEKHNLLTASKK 126

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>DCE1_RAT (P18088) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 593

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP+ R  +  V P+   ++ E+G      +       FFR+
Sbjct: 515 WYIPQSLRGVPDSPERREKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRM 567

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>DCE1_MOUSE (P48318) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 593

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP+ R  +  V P+   ++ E+G      +       FFR+
Sbjct: 515 WYIPQSLRGVPDSPERREKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRM 567

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>YPTV1_VOLCA (P31584) GTP-binding protein yptV1|
          Length = 203

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +2

Query: 272 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLDATKKF 448
           WD+    R R +         G + + D   +E FN ++Q L ++    SENV       
Sbjct: 62  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGN 121

Query: 449 EKLVTDKKEIDGLPASA 499
           +  +T KK +D   A A
Sbjct: 122 KSDLTGKKVVDYQAAKA 138

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>DCE1_PONPY (Q5R7S7) Glutamate decarboxylase 1 (EC 4.1.1.15)|
          Length = 594

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP  R  +  V P+   ++ E+G      +       FFR+
Sbjct: 516 WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRM 568

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>DCE1_PANTR (Q5IS68) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP  R  +  V P+   ++ E+G      +       FFR+
Sbjct: 516 WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRM 568

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>DCE1_HUMAN (Q99259) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ V DSP  R  +  V P+   ++ E+G      +       FFR+
Sbjct: 516 WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRM 568

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>DCE1_FELCA (P14748) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic
           acid decarboxylase)
          Length = 594

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +1

Query: 115 WNVVDHLKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRL 273
           W +   L+ + DSP+ R  +  V P+   ++ E+G      +       FFR+
Sbjct: 516 WYIPQSLRGIPDSPERREKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRM 568

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>RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha) (Rabaptin-4) (NY-REN-17 antigen)
          Length = 862

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +2

Query: 200 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 379
           +F+LRL Q +  +  +           ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERTQWAQYREYAERE----IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 380 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 481
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221

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>UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein|
           (tRNA(Ser)Sec-associated antigenic protein) (SLA/LP
           autoantigen) (Soluble liver antigen) (SLA)
           (Liver-pancreas antigen) (LP) (SLA-p35)
          Length = 501

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/89 (22%), Positives = 37/89 (41%)
 Frame = +2

Query: 356 EQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKG 535
           E++E+F+ +  +++KLSE ++E +L        L    K +D     A+        ++ 
Sbjct: 340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQ 399

Query: 536 HENASAENGPWMITLDAPSFTAVMQHAKN 622
              A       M T+   +F   M H  N
Sbjct: 400 VSGARVVPLGSMQTVSGYTFRGFMSHTNN 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,914,944
Number of Sequences: 219361
Number of extensions: 1198565
Number of successful extensions: 5353
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5346
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result