ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9p09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UVRC_BACTN (Q8A2N9) UvrABC system protein C (Protein uvrC) (Exci... 31 0.80
2WRK49_ARATH (Q9FHR7) Probable WRKY transcription factor 49 (WRKY... 28 4.0
3SLK_RAT (O08815) STE20-like serine/threonine-protein kinase (EC ... 28 5.2
4POMT1_RAT (Q99PR0) Protein O-mannosyl-transferase 1 (EC 2.4.1.10... 28 5.2
5POMT1_MOUSE (Q8R2R1) Protein O-mannosyl-transferase 1 (EC 2.4.1.... 28 6.8
6PUR7_LEPIN (Q8F0I0) Phosphoribosylaminoimidazole-succinocarboxam... 27 8.9
7PUR7_LEPIC (Q72UH8) Phosphoribosylaminoimidazole-succinocarboxam... 27 8.9
8HIS7_HELHP (Q7VGJ6) Imidazoleglycerol-phosphate dehydratase (EC ... 27 8.9
9MTHR_HUMAN (P42898) Methylenetetrahydrofolate reductase (EC 1.5.... 27 8.9
10MTHR1_SCHPO (Q10258) Methylenetetrahydrofolate reductase 1 (EC 1... 27 8.9

>UVRC_BACTN (Q8A2N9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 609

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 285 ICISHHVNICCWPCYVIASHADQICTVREHRGAILKDKNQ 166
           +C+ +H+  C  PC  + SH D +  + E +  ILK   Q
Sbjct: 176 VCLEYHIKKCAGPCVGLQSHEDYLKNIDEIK-EILKGNTQ 214



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>WRK49_ARATH (Q9FHR7) Probable WRKY transcription factor 49 (WRKY DNA-binding|
           protein 49)
          Length = 274

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 223 RPNMHSQRAPGCNSEGQ---EPKEDIAISLTNQNHGLDSASKMTP 98
           +  +H   A   N + Q   E KE     LTNQNH ++ A + TP
Sbjct: 188 KTKIHKHNAQDMNKKSQTQEESKEAQLGELTNQNHPVNKAQENTP 232



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>SLK_RAT (O08815) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)|
           (STE20-like kinase) (STE20-related
           serine/threonine-protein kinase) (STE20-related kinase)
          Length = 1206

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 238 DITGPAADVNMMGYANTEQIASGIH--FRLKSRAFIVAEPNGE--RVVFVNL 381
           D+ GPA DVN+   A     A G H   R K R  + ++P+ E  + V VNL
Sbjct: 395 DVDGPANDVNLETVAEPNDQAVGFHENGREKKRPQLESQPDTEDQQTVDVNL 446



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>POMT1_RAT (Q99PR0) Protein O-mannosyl-transferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1)
          Length = 747

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 125 SVVLVRQGYGYVFFWFLSFRIAPRCSLTVHIWSAW 229
           S  L    Y  +FFW+L  R    C L    WS W
Sbjct: 602 SASLATVAYTLLFFWYLLRRRRNICDLPEDAWSHW 636



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>POMT1_MOUSE (Q8R2R1) Protein O-mannosyl-transferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1)
          Length = 746

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 149 YGYVFFWFLSFRIAPRCSLTVHIWSAW 229
           Y  +FFW+L  R    C L    WS W
Sbjct: 610 YTLLFFWYLLRRRRSICDLPEDAWSRW 636



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>PUR7_LEPIN (Q8F0I0) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 285

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 84  LIPDGGVILLALSSPWFWFVKDM 152
           L+PD G +L  +S  WF F KD+
Sbjct: 37  LVPDKGKVLNRISVSWFEFFKDV 59



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>PUR7_LEPIC (Q72UH8) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 285

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 84  LIPDGGVILLALSSPWFWFVKDM 152
           L+PD G +L  +S  WF F KD+
Sbjct: 37  LVPDKGKVLNRISVSWFEFFKDV 59



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>HIS7_HELHP (Q7VGJ6) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 203

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 199 LSDCAYLVGMGSYDITGPAADVNMMGYAN--TEQIASGIHFRLKSRAFIVAEPNGERVVF 372
           + DC  ++G G      PAA +   G A+   ++        + +RAF+V E N  ++ F
Sbjct: 73  VEDCGIVLGQGLAQGIYPAAGIERFGNASIVMDEACVECDIDVSNRAFLVFETNAYKLPF 132



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>MTHR_HUMAN (P42898) Methylenetetrahydrofolate reductase (EC 1.5.1.20)|
          Length = 656

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -2

Query: 113 KQDDASIRNQGMELLINSCKSKIS 42
           K +DA+IRN G+EL ++ C+  ++
Sbjct: 288 KDNDAAIRNYGIELAVSLCQELLA 311



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>MTHR1_SCHPO (Q10258) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)|
          Length = 603

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 113 KQDDASIRNQGMELLINSCKSKIS 42
           K DD  +R +G+EL++  C+  I+
Sbjct: 244 KDDDEGVRERGVELIVEMCRKLIA 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,609,493
Number of Sequences: 219361
Number of extensions: 1067358
Number of successful extensions: 2360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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