ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 636 Score = 95.6 bits (48), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 89 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcggcttcgccgtggtgatg 148 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 181 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcgggttcggggtggtgatg 240
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 89 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcggcttcgccgtggtgatg 148 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 5079529 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcgggttcggggtggtgatg 5079470
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 95.6 bits (48), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 89 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcggcttcgccgtggtgatg 148 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 40027 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcgggttcggggtggtgatg 39968
>dbj|AK063218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-E02, full insert sequence Length = 636 Score = 95.6 bits (48), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 89 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcggcttcgccgtggtgatg 148 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 181 ccgccgccgttctggtcgacgccgacgccgtacctgttcatcgggttcggggtggtgatg 240
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 106 gacgccgacgccgtacctgttcatcggcttcgccgtggtgatgagcctcatcg 158 |||||||||||||||||| ||| | || ||||| ||| ||||| ||||||||| Sbjct: 25272028 gacgccgacgccgtaccttttcctggggttcgcggtgatgatgggcctcatcg 25272080
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 106 gacgccgacgccgtacctgttcatcggcttcgccgtggtgatgagcctcatcg 158 |||||||||||||||||| ||| | || ||||| ||| ||||| ||||||||| Sbjct: 90636 gacgccgacgccgtaccttttcctggggttcgcggtgatgatgggcctcatcg 90688
>dbj|AK107791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D05, full insert sequence Length = 701 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 106 gacgccgacgccgtacctgttcatcggcttcgccgtggtgatgagcctcatcg 158 |||||||||||||||||| ||| | || ||||| ||| ||||| ||||||||| Sbjct: 157 gacgccgacgccgtaccttttcctggggttcgcggtgatgatgggcctcatcg 209
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 cccgccgccgttctggtcgacgccgacg 115 ||||| ||||||||||||| |||||||| Sbjct: 3171795 cccgcagccgttctggtcggcgccgacg 3171822
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cctgttcatcggcttcgccg 140 |||||||||||||||||||| Sbjct: 1108677 cctgttcatcggcttcgccg 1108696
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and truncated rust resistance protein rp3-2t (rp3-2) gene, complete sequence Length = 276326 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tacacaataccatgaggaat 31 |||||||||||||||||||| Sbjct: 205054 tacacaataccatgaggaat 205035
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 cccgccgccgttctggtcgacgccgacg 115 ||||| ||||||||||||| |||||||| Sbjct: 58602 cccgcagccgttctggtcggcgccgacg 58629
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 cccgccgccgttctggtcgacgccgacg 115 ||||| ||||||||||||| |||||||| Sbjct: 9155 cccgcagccgttctggtcggcgccgacg 9182
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 tcatcggcttcgccgtggtgatga 149 ||||||||||||||| |||||||| Sbjct: 1656852 tcatcggcttcgccgaggtgatga 1656829 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 125 ttcatcggcttcgccgtggtgat 147 ||||||||| ||||||||||||| Sbjct: 3318090 ttcatcggcatcgccgtggtgat 3318068
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cctgttcatcggcttcgccg 140 |||||||||||||||||||| Sbjct: 1560357 cctgttcatcggcttcgccg 1560338
>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome Length = 11548 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgccg 112 |||||||||||||||||||| Sbjct: 7920 cgccgttctggtcgacgccg 7901
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcatcggcttcgccgtggtg 145 |||||||||||||||||||| Sbjct: 6977860 tcatcggcttcgccgtggtg 6977879
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ccaccatgatcccgccgccg 97 |||||||||||||||||||| Sbjct: 2096074 ccaccatgatcccgccgccg 2096093
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 47 cagatgaacgccggcggcgcctcttcg 73 |||||||||||||||| ||| |||||| Sbjct: 133727 cagatgaacgccggcgccgcatcttcg 133753
>ref|XM_463732.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 558 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 487 cgccgttctggtcgacgcc 469
>gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064J09 map near 50283S, complete sequence Length = 111122 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 ccaccatgatcccgccgccgttc 100 |||||| |||||||||||||||| Sbjct: 97379 ccaccaagatcccgccgccgttc 97401
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 ccaccatgatcccgccgccgttc 100 |||||| |||||||||||||||| Sbjct: 137323 ccaccaagatcccgccgccgttc 137301
>gb|BT015240.1| Drosophila melanogaster RE02389 full insert cDNA Length = 5873 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5007 aacgccggcggcgcctctt 5025
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gcctcttcgtcgcccacca 83 ||||||||||||||||||| Sbjct: 143982 gcctcttcgtcgcccacca 144000
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 cgcgcagatgaacgccggc 61 ||||||||||||||||||| Sbjct: 3916802 cgcgcagatgaacgccggc 3916784
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 catcggcttcgccgtggtg 145 ||||||||||||||||||| Sbjct: 4121713 catcggcttcgccgtggtg 4121695
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 47 cagatgaacgccggcggcgcctcttcg 73 |||||||||||||||| ||| |||||| Sbjct: 1908865 cagatgaacgccggcgccgcatcttcg 1908891
>gb|AY167906.1| Drosophila melanogaster clone G scribbled (scrib) mRNA, scrib-smi97B allele, complete cds Length = 5498 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 3456 aacgccggcggcgcctctt 3474
>gb|AY167905.1| Drosophila melanogaster clone F scribbled (scrib) mRNA, scrib-smi97B allele, partial cds Length = 3656 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 2982 aacgccggcggcgcctctt 3000
>gb|AY167904.1| Drosophila melanogaster clone D scribbled (scrib) mRNA, scrib-smi97B allele, complete cds Length = 6262 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5406 aacgccggcggcgcctctt 5424
>gb|AY167903.1| Drosophila melanogaster clone E scribbled (scrib) mRNA, scrib-smi97B allele, complete cds Length = 4327 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 3471 aacgccggcggcgcctctt 3489
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 cctgttcatcggcttcgcc 139 ||||||||||||||||||| Sbjct: 1224160 cctgttcatcggcttcgcc 1224178
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 47 cagatgaacgccggcggcgcctcttcg 73 |||||||||||||||| ||| |||||| Sbjct: 66546 cagatgaacgccggcgccgcatcttcg 66520
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 cgcgcagatgaacgccggc 61 ||||||||||||||||||| Sbjct: 3658643 cgcgcagatgaacgccggc 3658625
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 gttctggtcgacgccgacg 115 ||||||||||||||||||| Sbjct: 173004 gttctggtcgacgccgacg 172986
>emb|AJ252084.2|DME252084 Drosophila melanogaster mRNA for Vartul-1 protein (VART1 gene) Length = 7166 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5124 aacgccggcggcgcctctt 5142
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ctggtcgacgccgacgccg 118 ||||||||||||||||||| Sbjct: 3766353 ctggtcgacgccgacgccg 3766335
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 cgcctcttcgtcgcccacc 82 ||||||||||||||||||| Sbjct: 132459 cgcctcttcgtcgcccacc 132477
>ref|NM_170276.1| Drosophila melanogaster scribbled CG5462-RB, transcript variant B (scrib), mRNA Length = 7154 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5131 aacgccggcggcgcctctt 5149
>ref|NM_170275.1| Drosophila melanogaster scribbled CG5462-RA, transcript variant A (scrib), mRNA Length = 7054 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5031 aacgccggcggcgcctctt 5049
>ref|NM_080015.2| Drosophila melanogaster scribbled CG5462-RD, transcript variant D (scrib), mRNA Length = 7439 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5416 aacgccggcggcgcctctt 5434
>ref|NM_001014670.1| Drosophila melanogaster scribbled CG5462-RH, transcript variant H (scrib), mRNA Length = 6260 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5405 aacgccggcggcgcctctt 5423
>ref|NM_001014669.1| Drosophila melanogaster scribbled CG5462-RI, transcript variant I (scrib), mRNA Length = 6093 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5416 aacgccggcggcgcctctt 5434
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 cgcgcagatgaacgccggc 61 ||||||||||||||||||| Sbjct: 525282 cgcgcagatgaacgccggc 525300
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 ccaccatgatcccgccgccgttc 100 |||||| |||||||||||||||| Sbjct: 14108971 ccaccaagatcccgccgccgttc 14108993
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gcctcttcgtcgcccacca 83 ||||||||||||||||||| Sbjct: 2051113 gcctcttcgtcgcccacca 2051131
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 47 cagatgaacgccggcggcgcctcttcg 73 |||||||||||||||| ||| |||||| Sbjct: 1908863 cagatgaacgccggcgccgcatcttcg 1908889
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 41818961 cgccgttctggtcgacgcc 41818979
>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone BACR13P17, complete sequence Length = 170403 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 62627 aacgccggcggcgcctctt 62645
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 62337 cgccgttctggtcgacgcc 62355
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 ccggcggcgcctcttcgtc 75 ||||||||||||||||||| Sbjct: 5795389 ccggcggcgcctcttcgtc 5795371
>gb|AY069661.1| Drosophila melanogaster LD43989 full insert cDNA Length = 4976 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 4100 aacgccggcggcgcctctt 4118
>gb|AY163897.1| Panagrellus redivivus heat shock protein 70 A2 mRNA, partial cds Length = 1106 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 94 gccgttctggtcgacgccgacgc 116 ||||||||||| ||||||||||| Sbjct: 135 gccgttctggtagacgccgacgc 113
>gb|AF190774.2|AF190774 Drosophila melanogaster Scribble (scrib) mRNA, complete cds Length = 5988 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 5131 aacgccggcggcgcctctt 5149
>dbj|AK104159.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A05, full insert sequence Length = 1015 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 546 cgccgttctggtcgacgcc 528
>dbj|AK104094.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F09, full insert sequence Length = 1032 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 554 cgccgttctggtcgacgcc 536
>dbj|AK070662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058D06, full insert sequence Length = 1047 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 556 cgccgttctggtcgacgcc 538
>dbj|AK068769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166F08, full insert sequence Length = 1031 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 cgccgttctggtcgacgcc 111 ||||||||||||||||||| Sbjct: 554 cgccgttctggtcgacgcc 536
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 catcggcttcgccgtggtg 145 ||||||||||||||||||| Sbjct: 4095675 catcggcttcgccgtggtg 4095657
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aacgccggcggcgcctctt 71 ||||||||||||||||||| Sbjct: 306884 aacgccggcggcgcctctt 306902
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 ggtcgacgccgacgccgta 120 ||||||||||||||||||| Sbjct: 1640087 ggtcgacgccgacgccgta 1640069
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 ccaccatgatcccgccgccgttc 100 |||||| |||||||||||||||| Sbjct: 14190973 ccaccaagatcccgccgccgttc 14190995
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gcctcttcgtcgcccacca 83 ||||||||||||||||||| Sbjct: 17954 gcctcttcgtcgcccacca 17972 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 902,072 Number of Sequences: 3902068 Number of extensions: 902072 Number of successful extensions: 72441 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69412 Number of HSP's gapped (non-prelim): 3029 length of query: 158 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 136 effective length of database: 17,147,199,772 effective search space: 2332019168992 effective search space used: 2332019168992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
