ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9n07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NUDH_BORPE (Q7VTZ7) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
2NUDH_BORPA (Q7W482) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
3NUDH_BORBR (Q7WFP0) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
4CDC2H_THEPA (Q27032) Cell division control protein 2 homolog (EC... 28 6.2
5CDC2H_THEAN (Q26671) Cell division control protein 2 homolog (EC... 28 6.2

>NUDH_BORPE (Q7VTZ7) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -3

Query: 203 ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 102
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



to top

>NUDH_BORPA (Q7W482) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -3

Query: 203 ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 102
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



to top

>NUDH_BORBR (Q7WFP0) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -3

Query: 203 ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 102
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



to top

>CDC2H_THEPA (Q27032) Cell division control protein 2 homolog (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 298

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 214 YKSQNRHCSVCTRKQVRISE 155
           YK+QN H  +C  K++R+ E
Sbjct: 19  YKAQNNHGEICALKKIRVEE 38



to top

>CDC2H_THEAN (Q26671) Cell division control protein 2 homolog (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 298

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 214 YKSQNRHCSVCTRKQVRISE 155
           YK+QN H  +C  K++R+ E
Sbjct: 19  YKAQNNHGEICALKKIRVEE 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,325,105
Number of Sequences: 219361
Number of extensions: 572768
Number of successful extensions: 1276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top