Clone Name | baak4m24 |
---|---|
Clone Library Name | barley_pub |
>GPR1_YEAST (Q12361) G protein-coupled receptor GPR1| Length = 961 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 150 WLWDNRFSGGLLPGLSPKQRYYWCASLLLPA 58 W W N+ SG + GL K+ Y W + L+PA Sbjct: 160 WKWRNKRSGNMEGGLYKKRSYIWPITALVPA 190
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -2 Query: 141 DNRFSGGLLPGLSPKQRYYWCASLLLPATSPHARQICSAP*GPA 10 D FSG L PG S K ++ P TS + +CS GPA Sbjct: 248 DPEFSGKLTPGSSGKTELVSSVTVA-PVTSENVNPVCSGGAGPA 290
>TRDN_CANFA (P82179) Triadin| Length = 700 Score = 28.1 bits (61), Expect = 5.6 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -2 Query: 285 KDEPNSSSLKQ-EKQPQQAYRCSGKKIVCICKHTRYPKYSDR*PIVWLWDNRFSGGLLPG 109 K +P ++ +K+ +K P +A GK+ + KH + +Y+ ++ D G L PG Sbjct: 221 KVKPTAAKVKEVQKTPPKAKEKEGKETAAVAKHEQKDQYAF---CRYMIDMFVHGDLRPG 277 Query: 108 LSP 100 SP Sbjct: 278 QSP 280
>YKN1_SCHPO (Q9HDX4) Putative transporter B1A11.01| Length = 495 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 4/25 (16%) Frame = +1 Query: 139 VPEPDYRLPIAILG----ISGVFAY 201 VPEP++RLP+A LG ++G+F + Sbjct: 358 VPEPEFRLPMAFLGCFAIMTGMFIF 382
>PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 420 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 261 LKQEKQPQQAYRCSGKKIVCICKHTRYPKYSD 166 L EK P+ A R K + + HT Y +Y D Sbjct: 74 LPWEKVPEAARRLKAKAVYALTSHTPYGRYRD 105
>LFTR_PSEAE (Q9I0M1) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)| (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) Length = 226 Score = 23.1 bits (48), Expect(2) = 7.7 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 142 GQPFLWWS 119 GQP LWWS Sbjct: 52 GQPILWWS 59 Score = 23.1 bits (48), Expect(2) = 7.7 Identities = 8/23 (34%), Positives = 14/23 (60%) Frame = -2 Query: 216 KKIVCICKHTRYPKYSDR*PIVW 148 +++V +H +P Y D PI+W Sbjct: 35 QRLVAAYRHGCFPWYQDGQPILW 57
>LFTR_PSEPK (Q88FS7) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)| (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) Length = 226 Score = 23.1 bits (48), Expect(2) = 9.9 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 142 GQPFLWWS 119 GQP LWWS Sbjct: 52 GQPILWWS 59 Score = 22.7 bits (47), Expect(2) = 9.9 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -2 Query: 222 SGKKIVCICKHTRYPKYSDR*PIVW 148 S +++V +H +P Y D PI+W Sbjct: 33 SPERLVQAYRHGCFPWYQDGQPILW 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,966,386 Number of Sequences: 219361 Number of extensions: 933689 Number of successful extensions: 2696 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2695 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)