>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                         
Query: 178   gggatatctggtgtgtttgcatatgcagacaatcttcttgccgctgcacctgtaggcctg 237
             |||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 70588 gggatagctggtgcatttgcatatgcagacaatcttcttgctgctgcacctgtaggccta 70529

                   
Query: 238   ctgggg 243
             ||||||
Sbjct: 70528 ctgggg 70523



 Score = 46.1 bits (23), Expect = 0.076
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 300   ggaagtgaaagtgggcaatcagctgcangagtcaggtgagaacgtatttg 349
             |||||||||||||||| ||||| |  | ||||||||||| || |||||||
Sbjct: 69870 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttg 69821

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                            
Query: 178      gggatatctggtgtgtttgcatatgcagacaatcttcttgccgctgcacctgtaggcctg 237
                |||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 19367239 gggatagctggtgcatttgcatatgcagacaatcttcttgctgctgcacctgtaggccta 19367180

                      
Query: 238      ctgggg 243
                ||||||
Sbjct: 19367179 ctgggg 19367174



 Score = 46.1 bits (23), Expect = 0.076
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 300      ggaagtgaaagtgggcaatcagctgcangagtcaggtgagaacgtatttg 349
                |||||||||||||||| ||||| |  | ||||||||||| || |||||||
Sbjct: 19366521 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttg 19366472

>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence
          Length = 185268

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 92    ctctgtttgggagaaagaccgggaag 117
             |||||||||||| |||||||||||||
Sbjct: 62398 ctctgtttgggacaaagaccgggaag 62373

>gb|AY045771.1| Arcanobacterium pyogenes phosphoglucomutase (pgmA) gene, partial cds;
            and neuraminidase NanP (nanP) gene, complete cds
          Length = 6367

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 154  tatcggctaccgatcgctata 174
            |||||||||||||||||||||
Sbjct: 6293 tatcggctaccgatcgctata 6313

>emb|AL163642.4|CNS01RIM Human chromosome 14 DNA sequence BAC R-688D15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184037

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     tatctctgtttgggagaaaga 109
              |||||||||||||||||||||
Sbjct: 129631 tatctctgtttgggagaaaga 129651

>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence
          Length = 171124

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tgatgatgatgccctggaag 304
             ||||||||||||||||||||
Sbjct: 75787 tgatgatgatgccctggaag 75806

>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the
             5' end of a novel gene, a ribosomal protein L7A (Rpl7a)
             pseudogene and a CpG island, complete sequence
          Length = 127405

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   tgccctggaagtgaaagtgggcaa 317
             |||| |||||||||||||||||||
Sbjct: 82882 tgccatggaagtgaaagtgggcaa 82859

>gb|AC090108.15| Homo sapiens 12q BAC RP11-395D5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 168837

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ggaagtgaaagtgggcaatc 319
             ||||||||||||||||||||
Sbjct: 55146 ggaagtgaaagtgggcaatc 55127

>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence
          Length = 162838

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tgatgatgatgccctggaag 304
              ||||||||||||||||||||
Sbjct: 105211 tgatgatgatgccctggaag 105230

>gb|AC009117.8| Homo sapiens chromosome 16 clone RP11-481E4, complete sequence
          Length = 172868

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ctgctggggctgcttctctt 254
             ||||||||||||||||||||
Sbjct: 92263 ctgctggggctgcttctctt 92244

>dbj|AK185628.1| Mus musculus cDNA, clone:Y0G0134L09, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000030903, based on BLAT search
          Length = 384

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   tggtttcagctggtcctcat 22
           ||||||||||||||||||||
Sbjct: 261 tggtttcagctggtcctcat 242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,870
Number of Sequences: 3902068
Number of extensions: 3110870
Number of successful extensions: 55933
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55905
Number of HSP's gapped (non-prelim): 28
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)