ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4m15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474227.1| Oryza sativa (japonica cultivar-group), predic... 258 1e-65
2emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 258 1e-65
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 258 1e-65
4dbj|AK069126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 1e-65
5dbj|AK105717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 3e-63
6gb|AY111090.1| Zea mays CL581_1 mRNA sequence 151 2e-33
7gb|AC138735.3| Gallus gallus clone TAM31-15F7, complete sequence 42 1.5
8emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chr... 42 1.5
9gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromoso... 42 1.5
10gb|AC159212.3| Gallus gallus BAC clone CH261-173O18 from chromos... 42 1.5
11gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosom... 40 6.0
12gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.0
13gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.0
14ref|XM_755875.1| Ustilago maydis 521 hypothetical protein (UM048... 40 6.0
15ref|XM_570283.1| Cryptococcus neoformans var. neoformans JEC21 A... 40 6.0
16emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on ch... 40 6.0
17emb|Z49353.1|SCYJL078C S.cerevisiae chromosome X reading frame O... 40 6.0
18emb|X88851.1|SCESTGENE S.cerevisiae DNA for hypotetical proteins... 40 6.0
19emb|X83502.1|SCXORFS S.cerevisiae ORFs from chromosome X 40 6.0
20gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome... 40 6.0
21dbj|AK092600.1| Homo sapiens cDNA FLJ35281 fis, clone PROST2007248 40 6.0
22gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, compl... 40 6.0
23gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, compl... 40 6.0
24gb|AC005406.2| Homo sapiens clone b128f11, complete sequence 40 6.0
25ref|NM_001015813.1| Xenopus tropicalis MGC97610 protein (MGC9761... 40 6.0
26gb|BC090094.1| Xenopus tropicalis MGC97610 protein, mRNA (cDNA c... 40 6.0
27emb|CR762227.2| Xenopus tropicalis finished cDNA, clone TGas034h23 40 6.0
28gb|DQ331841.1| Synthetic construct Saccharomyces cerevisiae clon... 40 6.0
29gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosom... 40 6.0
30emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 6.0
31gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 6.0 
>ref|XM_474227.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1356

 Score =  258 bits (130), Expect = 1e-65
 Identities = 280/330 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gcaccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatgg 61
            |||||| || ||||||||||||||||||||||| ||||| ||| ||| | | ||||||||
Sbjct: 1008 gcaccatcttctgccgttctatggagtagtgcatattggctaccttgacggcggagatgg 1067

                                                                        
Query: 62   cgaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttca 121
             |||| |||||| || || |||||||||||  |||||||||| || || |||||||||||
Sbjct: 1068 tgaagtgattgatcgatctcattttcaggccttggttcatttttatggatgcaagcttca 1127

                                                                        
Query: 122  ggtccaggaaaggatgacaagacagatagctgaagcagtctattccgtctcacatcgtgg 181
            ||| || || || |||||||| ||||||||||||||||| ||||| || || ||| ||||
Sbjct: 1128 ggttcaagagagaatgacaaggcagatagctgaagcagtttattctgtttcgcattgtgg 1187

                                                                        
Query: 182  agctatagttgtcgtggaagccaaccacatctgcatgatatcaaggggaatagagaaaat 241
             || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1188 ggccatagttgttgtagaagctaaccacatttgcatgatatcaaggggaatagagaaaat 1247

                                                                        
Query: 242  caggagtagtacagcaacaattgcagttttaggtcagttctcgaccgattcttctgccaa 301
            ||||||||| || ||||| ||||||||| | |||||||| | ||| ||  ||||||||||
Sbjct: 1248 caggagtagcactgcaacgattgcagttctgggtcagtttttgacggacccttctgccaa 1307

                                          
Query: 302  ggcatcctttctacagagcgtgttagatac 331
            ||||  |||||| |||| |||  |||||||
Sbjct: 1308 ggcacgctttctgcagaacgtagtagatac 1337
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  258 bits (130), Expect = 1e-65
 Identities = 280/330 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2     gcaccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatgg 61
             |||||| || ||||||||||||||||||||||| ||||| ||| ||| | | ||||||||
Sbjct: 60654 gcaccatcttctgccgttctatggagtagtgcatattggctaccttgacggcggagatgg 60595

                                                                         
Query: 62    cgaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttca 121
              |||| |||||| || || |||||||||||  |||||||||| || || |||||||||||
Sbjct: 60594 tgaagtgattgatcgatctcattttcaggccttggttcatttttatggatgcaagcttca 60535

                                                                         
Query: 122   ggtccaggaaaggatgacaagacagatagctgaagcagtctattccgtctcacatcgtgg 181
             ||| || || || |||||||| ||||||||||||||||| ||||| || || ||| ||||
Sbjct: 60534 ggttcaagagagaatgacaaggcagatagctgaagcagtttattctgtttcgcattgtgg 60475

                                                                         
Query: 182   agctatagttgtcgtggaagccaaccacatctgcatgatatcaaggggaatagagaaaat 241
              || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 60474 ggccatagttgttgtagaagctaaccacatttgcatgatatcaaggggaatagagaaaat 60415

                                                                         
Query: 242   caggagtagtacagcaacaattgcagttttaggtcagttctcgaccgattcttctgccaa 301
             ||||||||| || ||||| ||||||||| | |||||||| | ||| ||  ||||||||||
Sbjct: 60414 caggagtagcactgcaacgattgcagttctgggtcagtttttgacggacccttctgccaa 60355

                                           
Query: 302   ggcatcctttctacagagcgtgttagatac 331
             ||||  |||||| |||| |||  |||||||
Sbjct: 60354 ggcacgctttctgcagaacgtagtagatac 60325
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  258 bits (130), Expect = 1e-65
 Identities = 280/330 (84%)
 Strand = Plus / Minus

                                                                            
Query: 2        gcaccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatgg 61
                |||||| || ||||||||||||||||||||||| ||||| ||| ||| | | ||||||||
Sbjct: 33848755 gcaccatcttctgccgttctatggagtagtgcatattggctaccttgacggcggagatgg 33848696

                                                                            
Query: 62       cgaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttca 121
                 |||| |||||| || || |||||||||||  |||||||||| || || |||||||||||
Sbjct: 33848695 tgaagtgattgatcgatctcattttcaggccttggttcatttttatggatgcaagcttca 33848636

                                                                            
Query: 122      ggtccaggaaaggatgacaagacagatagctgaagcagtctattccgtctcacatcgtgg 181
                ||| || || || |||||||| ||||||||||||||||| ||||| || || ||| ||||
Sbjct: 33848635 ggttcaagagagaatgacaaggcagatagctgaagcagtttattctgtttcgcattgtgg 33848576

                                                                            
Query: 182      agctatagttgtcgtggaagccaaccacatctgcatgatatcaaggggaatagagaaaat 241
                 || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 33848575 ggccatagttgttgtagaagctaaccacatttgcatgatatcaaggggaatagagaaaat 33848516

                                                                            
Query: 242      caggagtagtacagcaacaattgcagttttaggtcagttctcgaccgattcttctgccaa 301
                ||||||||| || ||||| ||||||||| | |||||||| | ||| ||  ||||||||||
Sbjct: 33848515 caggagtagcactgcaacgattgcagttctgggtcagtttttgacggacccttctgccaa 33848456

                                              
Query: 302      ggcatcctttctacagagcgtgttagatac 331
                ||||  |||||| |||| |||  |||||||
Sbjct: 33848455 ggcacgctttctgcagaacgtagtagatac 33848426
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>dbj|AK069126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007K22, full
            insert sequence
          Length = 2025

 Score =  258 bits (130), Expect = 1e-65
 Identities = 280/330 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gcaccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatgg 61
            |||||| || ||||||||||||||||||||||| ||||| ||| ||| | | ||||||||
Sbjct: 1228 gcaccatcttctgccgttctatggagtagtgcatattggctaccttgacggcggagatgg 1287

                                                                        
Query: 62   cgaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttca 121
             |||| |||||| || || |||||||||||  |||||||||| || || |||||||||||
Sbjct: 1288 tgaagtgattgatcgatctcattttcaggccttggttcatttttatggatgcaagcttca 1347

                                                                        
Query: 122  ggtccaggaaaggatgacaagacagatagctgaagcagtctattccgtctcacatcgtgg 181
            ||| || || || |||||||| ||||||||||||||||| ||||| || || ||| ||||
Sbjct: 1348 ggttcaagagagaatgacaaggcagatagctgaagcagtttattctgtttcgcattgtgg 1407

                                                                        
Query: 182  agctatagttgtcgtggaagccaaccacatctgcatgatatcaaggggaatagagaaaat 241
             || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1408 ggccatagttgttgtagaagctaaccacatttgcatgatatcaaggggaatagagaaaat 1467

                                                                        
Query: 242  caggagtagtacagcaacaattgcagttttaggtcagttctcgaccgattcttctgccaa 301
            ||||||||| || ||||| ||||||||| | |||||||| | ||| ||  ||||||||||
Sbjct: 1468 caggagtagcactgcaacgattgcagttctgggtcagtttttgacggacccttctgccaa 1527

                                          
Query: 302  ggcatcctttctacagagcgtgttagatac 331
            ||||  |||||| |||| |||  |||||||
Sbjct: 1528 ggcacgctttctgcagaacgtagtagatac 1557
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>dbj|AK105717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-F05, full
            insert sequence
          Length = 1478

 Score =  250 bits (126), Expect = 3e-63
 Identities = 279/330 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gcaccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatgg 61
            |||||| || ||||||||||||||||||||||| ||||| ||| ||| | | ||||||||
Sbjct: 737  gcaccatcttctgccgttctatggagtagtgcatattggctaccttgacggcggagatgg 796

                                                                        
Query: 62   cgaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttca 121
             |||| |||||| || || |||||||||||  |||||||||| || || |||||||||||
Sbjct: 797  tgaagtgattgatcgatctcattttcaggccttggttcatttttatggatgcaagcttca 856

                                                                        
Query: 122  ggtccaggaaaggatgacaagacagatagctgaagcagtctattccgtctcacatcgtgg 181
            ||| || || || |||||||| ||||||||||||||||| ||||| || || ||| ||||
Sbjct: 857  ggttcaagagagaatgacaaggcagatagctgaagcagtttattctgtttcgcattgtgg 916

                                                                        
Query: 182  agctatagttgtcgtggaagccaaccacatctgcatgatatcaaggggaatagagaaaat 241
             || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 917  ggccatagttgttgtagaagctaaccacatttgcatgatatcaaggggaatagagaaaat 976

                                                                        
Query: 242  caggagtagtacagcaacaattgcagttttaggtcagttctcgaccgattcttctgccaa 301
            ||||||||| || | ||| ||||||||| | |||||||| | ||| ||  ||||||||||
Sbjct: 977  caggagtagcactggaacgattgcagttctgggtcagtttttgacggacccttctgccaa 1036

                                          
Query: 302  ggcatcctttctacagagcgtgttagatac 331
            ||||  |||||| |||| |||  |||||||
Sbjct: 1037 ggcacgctttctgcagaacgtagtagatac 1066
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>gb|AY111090.1| Zea mays CL581_1 mRNA sequence
          Length = 1655

 Score =  151 bits (76), Expect = 2e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                        
Query: 3    caccacctgctgccgttctatggagtagtgcacattggttactttggcagtggagatggc 62
            ||||| || ||||| ||||| |||||||| |||||||| |||||||||| ||||   || 
Sbjct: 948  caccatcttctgcccttctacggagtagttcacattgggtactttggcaatggaagcgga 1007

                                                                        
Query: 63   gaagggattgaccgctcccattttcaggctctggttcatttctacgggtgcaagcttcag 122
            ||||| ||||| || || |||||||||||  |||||||||||||||||||||||||||||
Sbjct: 1008 gaaggcattgatcggtcgcattttcaggcgttggttcatttctacgggtgcaagcttcag 1067

                                                        
Query: 123  gtccaggaaaggatgacaagacagatagctgaagcagtctattc 166
            || || |||||||||||||| |||||||||||||| || |||||
Sbjct: 1068 gttcaagaaaggatgacaaggcagatagctgaagcggtttattc 1111
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>gb|AC138735.3| Gallus gallus clone TAM31-15F7, complete sequence
          Length = 144409

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aggaaaggatgacaagacaga 147
             |||||||||||||||||||||
Sbjct: 68072 aggaaaggatgacaagacaga 68052
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>emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chromosome 13 Contains the
             3' end of the DIAPH3 gene for diaphanous homolog 3
             (Drosophila), complete sequence
          Length = 206407

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 293   ttctgccaaggcatcctttct 313
             |||||||||||||||||||||
Sbjct: 16245 ttctgccaaggcatcctttct 16225
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>gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromosome unknown, complete
              sequence
          Length = 240564

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 127    aggaaaggatgacaagacaga 147
              |||||||||||||||||||||
Sbjct: 202230 aggaaaggatgacaagacaga 202210
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>gb|AC159212.3| Gallus gallus BAC clone CH261-173O18 from chromosome unknown, complete
              sequence
          Length = 236827

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    aggaaaggatgacaagacaga 147
              |||||||||||||||||||||
Sbjct: 125992 aggaaaggatgacaagacaga 126012
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>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence
          Length = 189323

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    ttcagcaaggcaggcactgc 439
              ||||||||||||||||||||
Sbjct: 110058 ttcagcaaggcaggcactgc 110077
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
              sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    gtgcaagcttcaggtccagg 129
              ||||||||||||||||||||
Sbjct: 420340 gtgcaagcttcaggtccagg 420359
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gatggcgaagggattgaccg 76
              ||||||||||||||||||||
Sbjct: 350077 gatggcgaagggattgaccg 350096
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>ref|XM_755875.1| Ustilago maydis 521 hypothetical protein (UM04821.1) partial mRNA
          Length = 3276

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  ctcgaccgattcttctgcca 300
            ||||||||||||||||||||
Sbjct: 1392 ctcgaccgattcttctgcca 1411
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>ref|XM_570283.1| Cryptococcus neoformans var. neoformans JEC21 ATP
           phosphoribosyltransferase (CND01510) partial mRNA
          Length = 1158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 gtgcaagcttcaggtccagg 129
           ||||||||||||||||||||
Sbjct: 493 gtgcaagcttcaggtccagg 512
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>emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on chromosome 13 Contains
            the 3' end of a novel gene, the gene for paraspeckle
            protein 1 (PSP1) (FLJ10955), two novel genes, a
            sialyltransferase 7D (SIAT7D) pseudogene, the 3' end of a
            variant of the ZNF237 gene for zinc finger protein 237
            and two CpG islands, complete sequence
          Length = 169303

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   ctcccattttcaggctctgg 96
            ||||||||||||||||||||
Sbjct: 5126 ctcccattttcaggctctgg 5145
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>emb|Z49353.1|SCYJL078C S.cerevisiae chromosome X reading frame ORF YJL078c
          Length = 3891

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   tggcagtggagatggcgaag 66
            ||||||||||||||||||||
Sbjct: 1257 tggcagtggagatggcgaag 1276
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>emb|X88851.1|SCESTGENE S.cerevisiae DNA for hypotetical proteins and esterase genes
          Length = 39594

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    tggcagtggagatggcgaag 66
             ||||||||||||||||||||
Sbjct: 21844 tggcagtggagatggcgaag 21825
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>emb|X83502.1|SCXORFS S.cerevisiae ORFs from chromosome X
          Length = 33099

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tggcagtggagatggcgaag 66
             ||||||||||||||||||||
Sbjct: 30876 tggcagtggagatggcgaag 30895
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>gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome 9, complete sequence
          Length = 211783

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ttttcaggctctggttcatt 102
             ||||||||||||||||||||
Sbjct: 57371 ttttcaggctctggttcatt 57352
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>dbj|AK092600.1| Homo sapiens cDNA FLJ35281 fis, clone PROST2007248
          Length = 3528

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  ctcccattttcaggctctgg 96
           ||||||||||||||||||||
Sbjct: 515 ctcccattttcaggctctgg 496
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>gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, complete sequence
          Length = 39248

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  tgttagatactgctaatcag 341
            ||||||||||||||||||||
Sbjct: 6710 tgttagatactgctaatcag 6729
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>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence
          Length = 192731

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    tgttagatactgctaatcag 341
              ||||||||||||||||||||
Sbjct: 176027 tgttagatactgctaatcag 176046
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>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence
          Length = 226345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tgttagatactgctaatcag 341
             ||||||||||||||||||||
Sbjct: 16700 tgttagatactgctaatcag 16681
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>ref|NM_001015813.1| Xenopus tropicalis MGC97610 protein (MGC97610), mRNA
          Length = 3735

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   cattttcaggctctggttca 100
            ||||||||||||||||||||
Sbjct: 1079 cattttcaggctctggttca 1060
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>gb|BC090094.1| Xenopus tropicalis MGC97610 protein, mRNA (cDNA clone MGC:97610
            IMAGE:6978326), complete cds
          Length = 3735

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   cattttcaggctctggttca 100
            ||||||||||||||||||||
Sbjct: 1079 cattttcaggctctggttca 1060
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>emb|CR762227.2| Xenopus tropicalis finished cDNA, clone TGas034h23
          Length = 946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  cattttcaggctctggttca 100
           ||||||||||||||||||||
Sbjct: 86  cattttcaggctctggttca 67
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>gb|DQ331841.1| Synthetic construct Saccharomyces cerevisiae clone FLH202827.01X PRY3
            gene, complete sequence
          Length = 2646

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   tggcagtggagatggcgaag 66
            ||||||||||||||||||||
Sbjct: 1951 tggcagtggagatggcgaag 1932
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>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence
          Length = 249504

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   ttcagcaaggcaggcactgc 439
             ||||||||||||||||||||
Sbjct: 31740 ttcagcaaggcaggcactgc 31759
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
              sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ttttcaggctctggttcatt 102
              ||||||||||||||||||||
Sbjct: 178089 ttttcaggctctggttcatt 178070
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ttttcaggctctggttcatt 102
              ||||||||||||||||||||
Sbjct: 165765 ttttcaggctctggttcatt 165746


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,439,838
Number of Sequences: 3902068
Number of extensions: 3439838
Number of successful extensions: 59158
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59085
Number of HSP's gapped (non-prelim): 73
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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