>RAB6A_MOUSE (P35279) Ras-related protein Rab-6A (Rab-6)|
          Length = 207

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 2   ALPGMETLSSAKQEDMVDVNLK 67
           ALPGME+     +EDM+D+ L+
Sbjct: 172 ALPGMESTQDRSREDMIDIKLE 193

>RAB6A_HUMAN (P20340) Ras-related protein Rab-6A (Rab-6)|
          Length = 207

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 2   ALPGMETLSSAKQEDMVDVNLK 67
           ALPGME+     +EDM+D+ L+
Sbjct: 172 ALPGMESTQDRSREDMIDIKLE 193

>RAB6A_RAT (Q9WVB1) Ras-related protein Rab-6A (Rab-6) (Fragment)|
          Length = 140

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 2   ALPGMETLSSAKQEDMVDVNLK 67
           ALPGME+     +EDM+D+ L+
Sbjct: 105 ALPGMESTQDRSREDMIDIKLE 126

>RAB6C_HUMAN (Q9H0N0) Ras-related protein Rab-6C (Rab6-like protein WTH3)|
          Length = 254

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 2   ALPGMETLSSAKQEDMVDVNLKXXXXXXXXXXXXXGGCS 118
           ALPGME+     +EDM D+ L+             GGCS
Sbjct: 173 ALPGMESTQDGSREDMSDIKLE----KPQEQTVSEGGCS 207

>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 566

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 174 SNGIPTQVNEREPFPLERY 230
           S   PTQV ++ PFPLE Y
Sbjct: 162 SPSTPTQVTKQHPFPLESY 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,105,910
Number of Sequences: 219361
Number of extensions: 850462
Number of successful extensions: 1370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)