ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baak4l02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 Score = 1142 bits (576), Expect = 0.0 Identities = 582/584 (99%) Strand = Plus / Plus Query: 12 aagaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtat 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 aagaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtat 1117 Query: 72 tcaggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1118 tcaggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttg 1177 Query: 132 gctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagct 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 gctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagct 1237 Query: 192 tgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1238 tgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgct 1297 Query: 252 aggcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1298 aggcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagg 1357 Query: 312 gagttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctg 371 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1358 gagttgaacagatacatccccaccgctgctgcaattggaggagtctgcattggcgcgctg 1417 Query: 372 actgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1418 actgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtc 1477 Query: 432 accatcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1478 accatcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttc 1537 Query: 492 ttcggtttttgatcaaggactgagtgatatggtgctatggctagctggttcttcttgcaa 551 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1538 ttcggtttttgatcaaggactgagtgatatggtgctagggctagctggttcttcttgcaa 1597 Query: 552 gccgagatactgtctggggaccttagattcagaaattgtagcag 595 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1598 gccgagatactgtctggggaccttagattcagaaattgtagcag 1641
>gb|BT017902.1| Zea mays clone EL01N0516D06.c mRNA sequence Length = 1209 Score = 593 bits (299), Expect = e-166 Identities = 443/491 (90%) Strand = Plus / Plus Query: 14 gaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattc 73 ||||| |||||| |||||||| ||||||||||| || || |||||||| || || || || Sbjct: 268 gaagtacagtggaaacttccttgttaaccttcttgggatgtggaaggagtctgaatactc 327 Query: 74 aggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggc 133 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 328 tggccattctgttcctgttggtggtcttgcttactatgtaactgccccatcaagtttggc 387 Query: 134 tgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttg 193 |||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 388 tgatgtccttgcaaatccattccatgcactgttttatgtggtcttcatgctgtcagcttg 447 Query: 194 cgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctag 253 |||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||| Sbjct: 448 cgctctgttctcaaaaacgtggattgaagtttctggttcatcagcaaaggatgttgctaa 507 Query: 254 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagaggga 313 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| Sbjct: 508 gcagctcaaggaacaacaaatggtgatgccaggacatcgtgagtcaaacttgcagaagga 567 Query: 314 gttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgac 373 ||||| ||||||||||||| |||||||||||||| ||||| ||||| ||||| |||| Sbjct: 568 actgaaccgatacatccccactgctgctgcatttggtggagtatgcatcggcgcattgac 627 Query: 374 tgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcac 433 |||||| |||||||||||||||||||| ||||||||||| || |||||||| || || || Sbjct: 628 tgtcctggctgatttcatgggtgcaattggttcaggaactggaatactgctggctgtgac 687 Query: 434 catcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 |||||||||||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 688 aatcatataccaatacttcgaaaccttcgagaaggaaagggcaacggagcttggtttctt 747 Query: 494 cggtttttgat 504 |||||||||| Sbjct: 748 tggtttttgat 758
>gb|BT016615.1| Zea mays clone Contig448 mRNA sequence Length = 1755 Score = 561 bits (283), Expect = e-157 Identities = 439/491 (89%) Strand = Plus / Plus Query: 14 gaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattc 73 ||||| |||||| |||||||| ||||||||||| || | |||||||| || || || || Sbjct: 1040 gaagtacagtggaaacttccttgttaaccttcttgggaagtggaaggagtctgaatactc 1099 Query: 74 aggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggc 133 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1100 tggccattctattcctgttggtggtcttgcttactatgtaactgccccatcaagtttggc 1159 Query: 134 tgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttg 193 |||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1160 tgatgtccttgcaaatccattccatgcactgttttatgtggtcttcatgctgtcagcctg 1219 Query: 194 cgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctag 253 ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 1220 tgctctgttctcaaagacatggattgaagtttcgggttcatcagcaaaggatgttgctaa 1279 Query: 254 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagaggga 313 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| Sbjct: 1280 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcgaacttgcagaagga 1339 Query: 314 gttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgac 373 | ||| ||||||||||||| |||||||||||||| || || ||||||||||| |||| Sbjct: 1340 acttaaccgatacatccccactgctgctgcatttggtggtgtatgcattggcgcattgac 1399 Query: 374 tgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcac 433 ||||| ||||||||||||||||| || ||||||||||| |||||| |||| || || || Sbjct: 1400 cgtcctggctgatttcatgggtgcgattggttcaggaactggtatattgctcgctgtgac 1459 Query: 434 catcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 |||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 1460 aatcatataccaatacttcgaaacctttgagaaggaaagggcgactgagcttggtttctt 1519 Query: 494 cggtttttgat 504 |||||||||| Sbjct: 1520 tggtttttgat 1530
>gb|BT024137.1| Zea mays clone EL01N0446B05 mRNA sequence Length = 1756 Score = 561 bits (283), Expect = e-157 Identities = 439/491 (89%) Strand = Plus / Plus Query: 14 gaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattc 73 ||||| |||||| |||||||| ||||||||||| || | |||||||| || || || || Sbjct: 1017 gaagtacagtggaaacttccttgttaaccttcttgggaagtggaaggagtctgaatactc 1076 Query: 74 aggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggc 133 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1077 tggccattctattcctgttggtggtcttgcttactatgtaactgccccatcaagtttggc 1136 Query: 134 tgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttg 193 |||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1137 tgatgtccttgcaaatccattccatgcactgttttatgtggtcttcatgctgtcagcctg 1196 Query: 194 cgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctag 253 ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 1197 tgctctgttctcaaagacatggattgaagtttccggttcatcagcaaaggatgttgctaa 1256 Query: 254 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagaggga 313 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| Sbjct: 1257 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcgaacttgcagaagga 1316 Query: 314 gttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgac 373 | ||| ||||||||||||| |||||||||||||| || || ||||||||||| |||| Sbjct: 1317 acttaaccgatacatccccactgctgctgcatttggtggtgtatgcattggcgcattgac 1376 Query: 374 tgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcac 433 ||||| ||||||||||||||||| || ||||||||||| |||||| |||| || || || Sbjct: 1377 cgtcctggctgatttcatgggtgcgattggttcaggaactggtatattgctcgctgtgac 1436 Query: 434 catcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 |||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 1437 aatcatataccaatacttcgaaacctttgagaaggaaagggcgactgagcttggtttctt 1496 Query: 494 cggtttttgat 504 |||||||||| Sbjct: 1497 tggtttttgat 1507
>gb|AY106354.1| Zea mays PCO109407 mRNA sequence Length = 1769 Score = 561 bits (283), Expect = e-157 Identities = 439/491 (89%) Strand = Plus / Plus Query: 14 gaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattc 73 ||||| |||||| |||||||| ||||||||||| || | |||||||| || || || || Sbjct: 1039 gaagtacagtggaaacttccttgttaaccttcttgggaagtggaaggagtctgaatactc 1098 Query: 74 aggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggc 133 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1099 tggccattctattcctgttggtggtcttgcttactatgtaactgccccatcaagtttggc 1158 Query: 134 tgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttg 193 |||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1159 tgatgtccttgcaaatccattccatgcactgttttatgtggtcttcatgctgtcagcctg 1218 Query: 194 cgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctag 253 ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 1219 tgctctgttctcaaagacatggattgaagtttccggttcatcagcaaaggatgttgctaa 1278 Query: 254 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagaggga 313 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| Sbjct: 1279 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcgaacttgcagaagga 1338 Query: 314 gttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgac 373 | ||| ||||||||||||| |||||||||||||| || || ||||||||||| |||| Sbjct: 1339 acttaaccgatacatccccactgctgctgcatttggtggtgtatgcattggcgcattgac 1398 Query: 374 tgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcac 433 ||||| ||||||||||||||||| || ||||||||||| |||||| |||| || || || Sbjct: 1399 cgtcctggctgatttcatgggtgcgattggttcaggaactggtatattgctcgctgtgac 1458 Query: 434 catcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 |||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 1459 aatcatataccaatacttcgaaacctttgagaaggaaagggcgactgagcttggtttctt 1518 Query: 494 cggtttttgat 504 |||||||||| Sbjct: 1519 tggtttttgat 1529
>dbj|AK100597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A15, full insert sequence Length = 2132 Score = 549 bits (277), Expect = e-153 Identities = 433/485 (89%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 1097 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 1156 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgt 139 ||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 1157 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaagtttggctgatgt 1216 Query: 140 tgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctct 199 | | || ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1217 tcttgcgaatccgttccatgcgctgttctatgtggtattcatgctgtcagcttgtgctct 1276 Query: 200 cttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagct 259 |||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| ||| | Sbjct: 1277 cttctcaaagacatggattgaagtatctggctcatctgcaaaggatgttgctaaacagtt 1336 Query: 260 caaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaa 319 ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||| Sbjct: 1337 gaaggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaa 1396 Query: 320 cagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcct 379 ||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||| || Sbjct: 1397 cagatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttct 1456 Query: 380 agctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcat 439 |||||||||||||||||| || ||||||||||| ||||| |||||||| || |||||||| Sbjct: 1457 agctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcat 1516 Query: 440 ataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1517 ttaccagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggttt 1576 Query: 500 ttgat 504 ||||| Sbjct: 1577 ttgat 1581
>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full insert sequence Length = 1621 Score = 545 bits (275), Expect = e-152 Identities = 434/487 (89%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 852 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 911 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgt 139 |||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 912 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaagtttagctgatgt 971 Query: 140 tgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctct 199 | ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 972 tctcgcaaatccattccatgcactgttctatgtggtcttcatgctgtcagcttgtgctct 1031 Query: 200 cttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagct 259 |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 1032 cttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgctaaacagct 1091 Query: 260 caaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaa 319 |||||| |||||||||||||||||||||||||||||||| || || ||| || ||||| Sbjct: 1092 caaggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaa 1151 Query: 320 cagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcct 379 |||||||||||| || |||||||||||||| |||||||||||||| || |||||||||| Sbjct: 1152 cagatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcct 1211 Query: 380 agctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcat 439 ||||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| Sbjct: 1212 agctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcat 1271 Query: 440 ataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 ||||| || || ||||| |||||||| |||||||| |||||||| |||||||| || || Sbjct: 1272 ctaccagtattttgagacattcgagaaagaaagggctaccgagctaggtttctttgggtt 1331 Query: 500 ttgatca 506 ||||||| Sbjct: 1332 ttgatca 1338
>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full insert sequence Length = 1970 Score = 537 bits (271), Expect = e-149 Identities = 433/487 (88%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 1092 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 1151 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgt 139 |||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 1152 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaagtttagctgatgt 1211 Query: 140 tgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctct 199 | ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1212 tctcgcaaatccattccatgcactgttctatgtggtcttcatgctgtcagcttgtgctct 1271 Query: 200 cttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagct 259 |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 1272 cttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgctaaacagct 1331 Query: 260 caaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaa 319 |||||| |||||||||||||||||||||||||||||||| || || ||| || ||||| Sbjct: 1332 caaggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaa 1391 Query: 320 cagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcct 379 |||||||||||| || |||||||||||||| |||||||||||||| || |||||||||| Sbjct: 1392 cagatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcct 1451 Query: 380 agctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcat 439 ||||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| Sbjct: 1452 agctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcat 1511 Query: 440 ataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 ||||| || || ||||| |||||||| |||||||| |||||||| ||||||| || || Sbjct: 1512 ctaccagtattttgagacattcgagaaagaaagggctaccgagctaggtttctctgggtt 1571 Query: 500 ttgatca 506 ||||||| Sbjct: 1572 ttgatca 1578
>dbj|AK062048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A12, full insert sequence Length = 1375 Score = 533 bits (269), Expect = e-148 Identities = 431/485 (88%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 572 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 631 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgt 139 ||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 632 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaagtttggctgatgt 691 Query: 140 tgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctct 199 | | |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 692 tcttgcaaatccgttccatgcgttgttctatgtggtcttcatgctgtcagcttgtgctct 751 Query: 200 cttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagct 259 |||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| ||||| Sbjct: 752 cttctcaaagacatggattgaagtatctggctcatctgcaaaggatgttgctaaacagct 811 Query: 260 caaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaa 319 |||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| ||||| Sbjct: 812 gaaggaacagcaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaa 871 Query: 320 cagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcct 379 ||||||||||||||| || ||||||||||| ||||| |||||||| || ||||||| || Sbjct: 872 cagatacatccccactgccgctgcatttggtggagtgtgcattggtgcattgactgttct 931 Query: 380 agctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcat 439 |||||||||||||||||| || ||||||||||| ||||| |||||||| || || ||||| Sbjct: 932 agctgatttcatgggtgctattggttcaggaactggtattctgcttgctgttactatcat 991 Query: 440 ataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 ||||| ||||||||||| |||||||| || ||||| || |||||||||||||| ||||| Sbjct: 992 ctaccagtacttcgagacattcgagaaagagagggcaactgagcttggtttctttggttt 1051 Query: 500 ttgat 504 ||||| Sbjct: 1052 ttgat 1056
>gb|AY110211.1| Zea mays CL336_2 mRNA sequence Length = 1189 Score = 509 bits (257), Expect = e-141 Identities = 419/473 (88%) Strand = Plus / Plus Query: 27 aacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggccattctatt 86 |||||||| | ||| ||||| || | |||||||||||| ||||| || ||||||||| || Sbjct: 423 aacttccttggtaatcttcttgggaaatggaaggaatctgagtactctggccattctgtt 482 Query: 87 cctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgttgtcgca 146 || | |||||||||||| |||||||| ||||| |||||||| |||||||||||| | ||| Sbjct: 483 ccggctggtggtcttgcttactatgtgactgcgccatcaagcttggctgatgttctggca 542 Query: 147 aatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctca 206 |||||| ||||||| |||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 543 aatccagtccatgcattgttctatgtggtctttatgctgtcagcctgtgctctcttctca 602 Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 |||||||||||||||||||||||||||||||| | ||| ||||||| |||||| ||||| Sbjct: 603 aagacatggattgaagtttctggttcatcagcgaaggacgttgctaagcagctgaaggag 662 Query: 267 caacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatac 326 |||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||| Sbjct: 663 caacaaatggtgatgccaggccatcgtgagtcaaacctgcaaagggaactgaacagatac 722 Query: 327 atccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgat 386 ||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 723 atcccaactgctgcagcatttggaggagtgtgcattggcgcgctaactgtcctagctgat 782 Query: 387 ttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaa 446 |||||||| ||||| || |||||||| || || ||||| || ||||| ||||||||||| Sbjct: 783 ttcatgggcgcaattggctcaggaactggcattctgctcgctgtcactatcatataccag 842 Query: 447 tacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 ||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 843 tactttgagacattcgagaaggaaagggcaaccgagcttggtttctttggttt 895
>gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 Score = 474 bits (239), Expect = e-130 Identities = 428/491 (87%) Strand = Plus / Plus Query: 14 gaagttcagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattc 73 ||||| |||||| ||||| |||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 939 gaagtacagtggaaactttctggttaaccttcttggtatatggaaagaatctgaatattc 998 Query: 74 aggccattctattcctgttggtggtcttgcatactatgtaactgccccatcaagtttggc 133 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 999 tggccattctatccctgttggtggtcttgcttactatgtaactgcaccatcaagtatggc 1058 Query: 134 tgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttg 193 |||| || | || |||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 1059 tgatattctggcgaatccattccatgcattgttctatgtggtcttcatgctgtcagcatg 1118 Query: 194 cgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctag 253 |||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1119 tgctctcttctcaaaaacatggattgaagtctctggttcatcagccaaggatgttgctaa 1178 Query: 254 gcagctcaaggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagaggga 313 |||||| |||||||||||||||||||||||||| ||||||||||||||| || | | ||| Sbjct: 1179 gcagctgaaggaacaacaaatggtgatgccaggtcatcgtgagtcaaacctgcaaaagga 1238 Query: 314 gttgaacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgac 373 |||||| ||||||||| || || ||||||||||| ||||| ||||| ||||| |||| Sbjct: 1239 actgaacaaatacatccctactgccgctgcatttggtggagtgtgcatcggcgcattgac 1298 Query: 374 tgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcac 433 ||| || |||||||||||||| ||||| |||||||||||||| || || | || | | Sbjct: 1299 tgttcttgctgatttcatgggcgcaattggttcaggaaccggaattttgttggctgattc 1358 Query: 434 catcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 |||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| || Sbjct: 1359 catcatataccagtactttgagaccttcgagaaggagagggcaacagagcttggtttttt 1418 Query: 494 cggtttttgat 504 ||| ||||||| Sbjct: 1419 cgggttttgat 1429
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| Sbjct: 10863217 aggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaaca 10863158 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| |||||||||||||| ||||| |||||||| || ||||||| |||| Sbjct: 10863157 gatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttctag 10863098 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 |||||||||||||||| || ||||||||||| ||||| |||||||| || |||||||| | Sbjct: 10863097 ctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcattt 10863038 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| ||||||||||| |||||||| || ||||| ||||||||||||||||| ||||||| Sbjct: 10863037 accagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggttttt 10862978 Query: 502 gat 504 ||| Sbjct: 10862977 gat 10862975 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 ||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| Sbjct: 10853602 aggaacagcaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaaca 10853543 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| || ||||||||||| ||||| |||||||| || ||||||| |||| Sbjct: 10853542 gatacatccccactgccgctgcatttggtggagtgtgcattggtgcattgactgttctag 10853483 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 |||||||||||||||| || ||||||||||| ||||| |||||||| || || ||||| | Sbjct: 10853482 ctgatttcatgggtgctattggttcaggaactggtattctgcttgctgttactatcatct 10853423 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| ||||||||||| |||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 10853422 accagtacttcgagacattcgagaaagagagggcaactgagcttggtttctttggttttt 10853363 Query: 502 gat 504 ||| Sbjct: 10853362 gat 10853360 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 10854170 agtttggctgatgttcttgcaaatccgttccatgcgttgttctatgtggtcttcatgctg 10854111 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||| Sbjct: 10854110 tcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggat 10854051 Query: 246 gttgcta 252 ||||||| Sbjct: 10854050 gttgcta 10854044 Score = 176 bits (89), Expect = 5e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 266 acaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagata 325 |||||||||||||||||| |||||| |||||||||||||| ||| ||| ||||||||| | Sbjct: 10874720 acaacaaatggtgatgcctggccattgtgagtcaaacttgcagaaggaattgaacagaca 10874661 Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctga 385 |||| |||| || ||||||||||| ||||| |||||||| || ||||||| |||||||| Sbjct: 10874660 catctccactgccgctgcatttggtggagtgtgcattggtgcattgactgttctagctga 10874601 Query: 386 tttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatacca 445 |||||||||||| || ||||||||||| || || |||||||| || |||||||| ||||| Sbjct: 10874600 tttcatgggtgcgattggttcaggaactggcattctgcttgctgttaccatcatctacca 10874541 Query: 446 ---atacttcgagacgttcgaga 465 ||||||||||| ||||||| Sbjct: 10874540 gctgtacttcgagacattcgaga 10874518 Score = 172 bits (87), Expect = 8e-40 Identities = 117/127 (92%) Strand = Plus / Minus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||||||||||||| | || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 10863790 agtttggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctg 10863731 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||| Sbjct: 10863730 tcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggat 10863671 Query: 246 gttgcta 252 ||||||| Sbjct: 10863670 gttgcta 10863664 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 10864013 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 10863954 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 ||| |||||||||||||||| || |||||||||||||| |||||||| Sbjct: 10863953 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaag 10863906 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 10854392 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 10854333 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 ||| |||||||||||||||| || |||||||||||||| |||||||| Sbjct: 10854332 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaag 10854285 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 209 gacatggattgaagtttctggttcatcagcaagggatgttg 249 ||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 10876111 gacatggattgaagtttctggctcatctgcaaaggatgttg 10876071
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| Sbjct: 86940 aggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaaca 86881 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| |||||||||||||| ||||| |||||||| || ||||||| |||| Sbjct: 86880 gatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttctag 86821 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 |||||||||||||||| || ||||||||||| ||||| |||||||| || |||||||| | Sbjct: 86820 ctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcattt 86761 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| ||||||||||| |||||||| || ||||| ||||||||||||||||| ||||||| Sbjct: 86760 accagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggttttt 86701 Query: 502 gat 504 ||| Sbjct: 86700 gat 86698 Score = 260 bits (131), Expect = 5e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 ||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| Sbjct: 77325 aggaacagcaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaaca 77266 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| || ||||||||||| ||||| |||||||| || ||||||| |||| Sbjct: 77265 gatacatccccactgccgctgcatttggtggagtgtgcattggtgcattgactgttctag 77206 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 |||||||||||||||| || ||||||||||| ||||| |||||||| || || ||||| | Sbjct: 77205 ctgatttcatgggtgctattggttcaggaactggtattctgcttgctgttactatcatct 77146 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| ||||||||||| |||||||| || ||||| || |||||||||||||| ||||||| Sbjct: 77145 accagtacttcgagacattcgagaaagagagggcaactgagcttggtttctttggttttt 77086 Query: 502 gat 504 ||| Sbjct: 77085 gat 77083 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 77893 agtttggctgatgttcttgcaaatccgttccatgcgttgttctatgtggtcttcatgctg 77834 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||| Sbjct: 77833 tcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggat 77774 Query: 246 gttgcta 252 ||||||| Sbjct: 77773 gttgcta 77767 Score = 176 bits (89), Expect = 5e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 266 acaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagata 325 |||||||||||||||||| |||||| |||||||||||||| ||| ||| ||||||||| | Sbjct: 98443 acaacaaatggtgatgcctggccattgtgagtcaaacttgcagaaggaattgaacagaca 98384 Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctga 385 |||| |||| || ||||||||||| ||||| |||||||| || ||||||| |||||||| Sbjct: 98383 catctccactgccgctgcatttggtggagtgtgcattggtgcattgactgttctagctga 98324 Query: 386 tttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatacca 445 |||||||||||| || ||||||||||| || || |||||||| || |||||||| ||||| Sbjct: 98323 tttcatgggtgcgattggttcaggaactggcattctgcttgctgttaccatcatctacca 98264 Query: 446 ---atacttcgagacgttcgaga 465 ||||||||||| ||||||| Sbjct: 98263 gctgtacttcgagacattcgaga 98241 Score = 172 bits (87), Expect = 8e-40 Identities = 117/127 (92%) Strand = Plus / Minus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||||||||||||| | || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 87513 agtttggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctg 87454 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||| Sbjct: 87453 tcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggat 87394 Query: 246 gttgcta 252 ||||||| Sbjct: 87393 gttgcta 87387 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 87736 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 87677 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 ||| |||||||||||||||| || |||||||||||||| |||||||| Sbjct: 87676 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaag 87629 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 78115 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 78056 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 ||| |||||||||||||||| || |||||||||||||| |||||||| Sbjct: 78055 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaag 78008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 209 gacatggattgaagtttctggttcatcagcaagggatgttg 249 ||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 99834 gacatggattgaagtttctggctcatctgcaaaggatgttg 99794
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| Sbjct: 2922 aggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaaca 2863 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| |||||||||||||| ||||| |||||||| || ||||||| |||| Sbjct: 2862 gatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttctag 2803 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 |||||||||||||||| || ||||||||||| ||||| |||||||| || |||||||| | Sbjct: 2802 ctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcattt 2743 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| ||||||||||| |||||||| || ||||| ||||||||||||||||| ||||||| Sbjct: 2742 accagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggttttt 2683 Query: 502 gat 504 ||| Sbjct: 2682 gat 2680 Score = 176 bits (89), Expect = 5e-41 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 266 acaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagata 325 |||||||||||||||||| |||||| |||||||||||||| ||| ||| ||||||||| | Sbjct: 14425 acaacaaatggtgatgcctggccattgtgagtcaaacttgcagaaggaattgaacagaca 14366 Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctga 385 |||| |||| || ||||||||||| ||||| |||||||| || ||||||| |||||||| Sbjct: 14365 catctccactgccgctgcatttggtggagtgtgcattggtgcattgactgttctagctga 14306 Query: 386 tttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatacca 445 |||||||||||| || ||||||||||| || || |||||||| || |||||||| ||||| Sbjct: 14305 tttcatgggtgcgattggttcaggaactggcattctgcttgctgttaccatcatctacca 14246 Query: 446 ---atacttcgagacgttcgaga 465 ||||||||||| ||||||| Sbjct: 14245 gctgtacttcgagacattcgaga 14223 Score = 172 bits (87), Expect = 8e-40 Identities = 117/127 (92%) Strand = Plus / Minus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||||||||||||| | || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 3495 agtttggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctg 3436 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||| Sbjct: 3435 tcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggat 3376 Query: 246 gttgcta 252 ||||||| Sbjct: 3375 gttgcta 3369 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || || |||||||||||||| || | |||||||||||| ||||| || ||||| Sbjct: 3718 cagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggcca 3659 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 ||| |||||||||||||||| || |||||||||||||| |||||||| Sbjct: 3658 ttcggttcctgttggtggtctcgcttactatgtaactgctccatcaag 3611 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 209 gacatggattgaagtttctggttcatcagcaagggatgttg 249 ||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 15816 gacatggattgaagtttctggctcatctgcaaaggatgttg 15776
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||| |||||||||||||||||||||||||||||||| || || ||| || ||||||| Sbjct: 5867167 aggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaaca 5867226 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||||||||| || |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 5867227 gatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcctag 5867286 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| | Sbjct: 5867287 ctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcatct 5867346 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| || || ||||| |||||||| |||||||| |||||||| |||||||| || |||| Sbjct: 5867347 accagtattttgagacattcgagaaagaaagggctaccgagctaggtttctttgggtttt 5867406 Query: 502 gatca 506 ||||| Sbjct: 5867407 gatca 5867411 Score = 212 bits (107), Expect = 1e-51 Identities = 131/139 (94%) Strand = Plus / Plus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5866935 agtttagctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctg 5866994 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 5866995 tcagcttgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggat 5867054 Query: 246 gttgctaggcagctcaagg 264 ||||||| |||||||||| Sbjct: 5867055 gttgctaaacagctcaagg 5867073 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 5866703 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 5866762 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 |||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 5866763 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaag 5866810
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||| |||||||||||||||||||||||||||||||| || || ||| || ||||||| Sbjct: 95997 aggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaaca 96056 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||||||||| || |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 96057 gatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcctag 96116 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| | Sbjct: 96117 ctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcatct 96176 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| || || ||||| |||||||| |||||||| |||||||| |||||||| || |||| Sbjct: 96177 accagtattttgagacattcgagaaagaaagggctaccgagctaggtttctttgggtttt 96236 Query: 502 gatca 506 ||||| Sbjct: 96237 gatca 96241 Score = 212 bits (107), Expect = 1e-51 Identities = 131/139 (94%) Strand = Plus / Plus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95765 agtttagctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctg 95824 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 95825 tcagcttgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggat 95884 Query: 246 gttgctaggcagctcaagg 264 ||||||| |||||||||| Sbjct: 95885 gttgctaaacagctcaagg 95903 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 95533 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 95592 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 |||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 95593 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaag 95640
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||| |||||||||||||||||||||||||||||||| || || ||| || ||||||| Sbjct: 16789 aggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaaca 16848 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||||||||| || |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 16849 gatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcctag 16908 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| | Sbjct: 16909 ctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcatct 16968 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| || || ||||| |||||||| |||||||| |||||||| |||||||| || |||| Sbjct: 16969 accagtattttgagacattcgagaaagaaagggctaccgagctaggtttctttgggtttt 17028 Query: 502 gatca 506 ||||| Sbjct: 17029 gatca 17033 Score = 212 bits (107), Expect = 1e-51 Identities = 131/139 (94%) Strand = Plus / Plus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 16557 agtttagctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctg 16616 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 16617 tcagcttgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggat 16676 Query: 246 gttgctaggcagctcaagg 264 ||||||| |||||||||| Sbjct: 16677 gttgctaaacagctcaagg 16695 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 16325 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 16384 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 |||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 16385 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaag 16432
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||| |||||||||||||||||||||||||||||||| || || ||| || ||||||| Sbjct: 5866380 aggagcaacaaatggtgatgccaggccatcgtgagtcgaatttacagaaagaattgaaca 5866439 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||||||||| || |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 5866440 gatacatccctacagctgctgcatttggtggagtctgcattggtgcattgactgtcctag 5866499 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||||||||| ||||||||||| || |||||||| || || || ||||| | Sbjct: 5866500 ctgatttcatgggtgcaattggttcaggaactgggatactgctcgctgttacaatcatct 5866559 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttttt 501 |||| || || ||||| |||||||| |||||||| |||||||| |||||||| || |||| Sbjct: 5866560 accagtattttgagacattcgagaaagaaagggctaccgagctaggtttctttgggtttt 5866619 Query: 502 gatca 506 ||||| Sbjct: 5866620 gatca 5866624 Score = 212 bits (107), Expect = 1e-51 Identities = 131/139 (94%) Strand = Plus / Plus Query: 126 agtttggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctg 185 ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5866148 agtttagctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctg 5866207 Query: 186 tcagcttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggat 245 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 5866208 tcagcttgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggat 5866267 Query: 246 gttgctaggcagctcaagg 264 ||||||| |||||||||| Sbjct: 5866268 gttgctaaacagctcaagg 5866286 Score = 103 bits (52), Expect = 6e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 20 cagtggcaacttcctggttaaccttctcggtatatggaaggaatccgagtattcaggcca 79 |||||| || ||||| || |||||| | || | |||||||||||| ||||| || ||||| Sbjct: 5865916 cagtggaaatttcctagtcaaccttattgggaaatggaaggaatctgagtactctggcca 5865975 Query: 80 ttctattcctgttggtggtcttgcatactatgtaactgccccatcaag 127 |||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 5865976 ttctgttcctgttggtggtcttgcttactatgtaactgctccatcaag 5866023
>ref|NM_001036399.1| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.2 mRNA, complete cds Length = 1961 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1315 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1374 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1375 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1434 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1435 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1494 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1495 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1554 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1555 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1614 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1615 gagacctttgagaaggaaa 1633
>ref|NM_128976.2| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.1 mRNA, complete cds Length = 1882 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1242 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1301 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1302 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1361 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1362 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1421 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1422 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1481 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1482 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1541 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1542 gagacctttgagaaggaaa 1560
>gb|BT000507.1| Arabidopsis thaliana endoplasmic reticulum insertion protein (At2g34250/F13P17.9) mRNA, complete cds Length = 1428 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1078 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1137 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1138 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1197 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1198 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1257 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1258 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1317 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1318 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1377 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1378 gagacctttgagaaggaaa 1396
>gb|AF367298.1| Arabidopsis thaliana At2g34250/F13P17.9 mRNA, complete cds Length = 1804 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1216 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1275 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1276 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1335 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1336 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1395 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1396 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1455 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1456 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1515 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1516 gagacctttgagaaggaaa 1534
>emb|BX821829.1|CNS0A807 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1226 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1285 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1286 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1345 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1346 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1405 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1406 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1465 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1466 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1525 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1526 gagacctttgagaaggaaa 1544
>gb|AY088235.1| Arabidopsis thaliana clone 4598 mRNA, complete sequence Length = 1821 Score = 196 bits (99), Expect = 6e-47 Identities = 264/319 (82%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 1242 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 1301 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaa 272 ||||||||||| ||||| || || || |||||||| |||| |||||| |||||||||||| Sbjct: 1302 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaa 1361 Query: 273 atggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatcccc 332 |||||||||||||| || | || |||||||| ||| ||| |||||||||||||||| Sbjct: 1362 atggtgatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatccca 1421 Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 || || || || ||||||||||| || || || || || || || | |||||||||||| Sbjct: 1422 acagcagcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatg 1481 Query: 393 ggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttc 452 || || ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||| Sbjct: 1482 ggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttc 1541 Query: 453 gagacgttcgagaaggaaa 471 ||||| || |||||||||| Sbjct: 1542 gagacctttgagaaggaaa 1560
>gb|AF190652.1|AF190652 Phaseolus vulgaris putative integral membrane protein (sec61) mRNA, sec61-1 allele, complete cds Length = 2150 Score = 165 bits (83), Expect = 2e-37 Identities = 335/419 (79%) Strand = Plus / Plus Query: 86 tcctgttggtggtcttgcatactatgtaactgccccatcaagtttggctgatgttgtcgc 145 ||||||||||||| |||||||||| | ||||| || || || || ||||| | | || Sbjct: 1059 tcctgttggtggtattgcatactacatcactgctccttccagcttagctgacatggcagc 1118 Query: 146 aaatccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctc 205 |||||| |||||||| ||||||| | || || ||| ||||||| || || | ||||| Sbjct: 1119 aaatcctttccatgcattgttctaccttgtgtttatgttgtcagcatgtgccttgttctc 1178 Query: 206 aaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaagga 265 || || ||||||||||| ||||||||||| || | |||||||| | ||||| ||||| Sbjct: 1179 taaaacttggattgaagtctctggttcatctgctaaagatgttgcaaaacagctgaagga 1238 Query: 266 acaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagata 325 ||||||||||| ||||| || ||||| ||||||||| || ||| || |||||| |||| Sbjct: 1239 gcaacaaatggtaatgcctggacatcgggagtcaaacctgcagaaagaattgaaccgata 1298 Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctga 385 ||| ||||| ||||| ||||||||||| | || ||||| || |||||||| | || || Sbjct: 1299 cattcccactgctgcagcatttggaggcatttgtattggtgctctgactgtgttggcaga 1358 Query: 386 tttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatacca 445 ||||||||| |||||||||||||| || || ||| ||||||| || || |||||||| || Sbjct: 1359 tttcatgggggcaatcggttcagggactggaatattgcttgcagtaacaatcatatatca 1418 Query: 446 atacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggtttttgat 504 ||||||||||| || |||||||| || || | |||||||| ||||| ||||| |||| Sbjct: 1419 gtacttcgagacatttgagaaggagagagctagtgagcttggcttctttggtttctgat 1477
>ref|NM_102671.2| Arabidopsis thaliana protein translocase AT1G29310 mRNA, complete cds Length = 1688 Score = 155 bits (78), Expect = 2e-34 Identities = 279/346 (80%) Strand = Plus / Plus Query: 148 atccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaa 207 ||||||||||||| ||||||||| | ||||||||||| | ||||| || || ||||||| Sbjct: 1169 atccattccatgctctgttctatatcgtcttcatgctcactgcttgtgccctattctcaa 1228 Query: 208 agacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaac 267 | |||||||||||||| || || || || || || ||||| |||| |||||| ||||||| Sbjct: 1229 aaacatggattgaagtctccgggtcttctgctagagatgtagctaagcagctaaaggaac 1288 Query: 268 aacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagataca 327 |||||||||||||||| || || | ||||| ||||| | | |||| ||||| | |||| Sbjct: 1289 aacaaatggtgatgccgggacacagagagtccaacttacaaaaggagctgaaccggtaca 1348 Query: 328 tccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatt 387 |||| || || ||||||||||||||||| ||||| || ||||| ||||| | ||||||| Sbjct: 1349 tcccaacagcggctgcatttggaggagtgtgcatcggtgcgctcactgttttggctgatt 1408 Query: 388 tcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaat 447 ||||||| || || || || || || || || | ||||| ||||| |||||||| || | Sbjct: 1409 tcatgggagccattgggtcggggactggaatcttacttgcagtcacaatcatatatcagt 1468 Query: 448 acttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 | || || || || |||||||||| || | ||||||||||||||| Sbjct: 1469 attttgaaacctttgagaaggaaaaagccagcgagcttggtttctt 1514
>gb|AY093047.1| Arabidopsis thaliana putative protein transport protein SEC61 alpha subunit (At1g29310) mRNA, complete cds Length = 1686 Score = 155 bits (78), Expect = 2e-34 Identities = 279/346 (80%) Strand = Plus / Plus Query: 148 atccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaa 207 ||||||||||||| ||||||||| | ||||||||||| | ||||| || || ||||||| Sbjct: 1167 atccattccatgctctgttctatatcgtcttcatgctcactgcttgtgccctattctcaa 1226 Query: 208 agacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaac 267 | |||||||||||||| || || || || || || ||||| |||| |||||| ||||||| Sbjct: 1227 aaacatggattgaagtctccgggtcttctgctagagatgtagctaagcagctaaaggaac 1286 Query: 268 aacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagataca 327 |||||||||||||||| || || | ||||| ||||| | | |||| ||||| | |||| Sbjct: 1287 aacaaatggtgatgccgggacacagagagtccaacttacaaaaggagctgaaccggtaca 1346 Query: 328 tccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatt 387 |||| || || ||||||||||||||||| ||||| || ||||| ||||| | ||||||| Sbjct: 1347 tcccaacagcggctgcatttggaggagtgtgcatcggtgcgctcactgttttggctgatt 1406 Query: 388 tcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaat 447 ||||||| || || || || || || || || | ||||| ||||| |||||||| || | Sbjct: 1407 tcatgggagccattgggtcggggactggaatcttacttgcagtcacaatcatatatcagt 1466 Query: 448 acttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 | || || || || |||||||||| || | ||||||||||||||| Sbjct: 1467 attttgaaacctttgagaaggaaaaagccagcgagcttggtttctt 1512
>emb|BX820660.1|CNS0A8Q9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 567 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 218 tgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaacaacaaatggt 277 |||||| ||||| || || || |||||||| |||| |||||| ||||||||||||||||| Sbjct: 1 tgaagtctctggatcttctgctagggatgtagctaagcagctaaaggaacaacaaatggt 60 Query: 278 gatgccaggccatcgtgagtcaaacttggagagggagttgaacagatacatccccaccgc 337 ||||||||| || | || |||||||| ||| ||| |||||||||||||||| || || Sbjct: 61 gatgccaggacacagagaatcaaacttacagaaggaactgaacagatacatcccaacagc 120 Query: 338 tgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatgggtgc 397 || || ||||||||||| || || || || || || || | |||||||||||||| || Sbjct: 121 agcagcttttggaggagtttgtatcggtgcacttaccgttttggctgatttcatgggagc 180 Query: 398 aatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgagac 457 ||||| || |||||||| || ||| | |||||||| ||||||||||| || |||||||| Sbjct: 181 catcgggtcgggaaccggaattctgttggcggtcacgatcatataccagtatttcgagac 240 Query: 458 gttcgagaaggaaa 471 || |||||||||| Sbjct: 241 ctttgagaaggaaa 254
>gb|AY087495.1| Arabidopsis thaliana clone 36037 mRNA, complete sequence Length = 1595 Score = 139 bits (70), Expect = 1e-29 Identities = 277/346 (80%) Strand = Plus / Plus Query: 148 atccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaa 207 ||||||||||||| ||||||||| | ||||||||||| | ||||| || || ||||||| Sbjct: 1169 atccattccatgctctgttctatatcgtcttcatgctcactgcttgtgccctattctcaa 1228 Query: 208 agacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaac 267 | |||||||||||||| || || || || || || ||||| ||| |||||| ||||||| Sbjct: 1229 aaacatggattgaagtctccgggtcttctgctagagatgtatctaagcagctaaaggaac 1288 Query: 268 aacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaacagataca 327 |||||||||||||||| || || | ||||| ||||| | | |||| ||||| | |||| Sbjct: 1289 aacaaatggtgatgccgggacacagagagtccaacttacaaaaggagctgaaccggtaca 1348 Query: 328 tccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatt 387 |||| || || ||||||||||||||||| ||||| || ||||| ||||| | ||||||| Sbjct: 1349 tcccaacagcggctgcatttggaggagtgtgcatcggtgcgctcactgttttggctgatt 1408 Query: 388 tcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaat 447 ||||| | || || || || || || || || | ||||| ||||| |||||||| || | Sbjct: 1409 tcatgagagccattgggtcggggactggaatcttacttgcagtcacaatcatatatcagt 1468 Query: 448 acttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 | || || || || |||||||||| || | ||||||||||||||| Sbjct: 1469 attttgaaacctttgagaaggaaaaagccagcgagcttggtttctt 1514
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||| ||||| || ||||| || ||||| ||| | | ||| ||||| Sbjct: 24020 aggaacaacaaatggtaatgcctggtcatcgggaatcaaatttgcaaaaagagctgaacc 23961 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||| || ||||| |||||||||||||||||| | || ||||| || || || || | | Sbjct: 23960 gatatattcccactgctgctgcatttggaggaatgtgtattggtgccctaacagtattgg 23901 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 | ||||||||||||||||| ||||| || ||||| ||| | ||||| || || ||||| | Sbjct: 23900 cagatttcatgggtgcaattggttccgggaccggaatattacttgcagtaacaatcatct 23841 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 | || ||||| ||||| || ||||||||||| || | ||||||||||||||| ||||| Sbjct: 23840 atcagtactttgagacatttgagaaggaaagagccagcgagcttggtttctttggttt 23783 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 81 tctattcctgttggtggtcttgcatactatgtaactgc 118 ||||||||||||||||| ||||||||||| ||||||| Sbjct: 24744 tctattcctgttggtggcattgcatactatataactgc 24707
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||| ||||| || ||||| || ||||| ||| | | ||| ||||| Sbjct: 110781 aggaacaacaaatggtaatgcctggtcatcgggaatcaaatttgcaaaaagagctgaacc 110840 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||| || ||||| |||||||||||||||||| | || ||||| || || || || | | Sbjct: 110841 gatatattcccactgctgctgcatttggaggaatgtgtattggtgccctaacagtattgg 110900 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 | ||||||||||||||||| ||||| || ||||| ||| | ||||| || || ||||| | Sbjct: 110901 cagatttcatgggtgcaattggttccgggaccggaatattacttgcagtaacaatcatct 110960 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 | || ||||| ||||| || ||||||||||| || | ||||||||||||||| ||||| Sbjct: 110961 atcagtactttgagacatttgagaaggaaagagccagcgagcttggtttctttggttt 111018 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 81 tctattcctgttggtggtcttgcatactatgtaactgc 118 ||||||||||||||||| ||||||||||| ||||||| Sbjct: 110057 tctattcctgttggtggcattgcatactatataactgc 110094
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 115 bits (58), Expect = 2e-22 Identities = 172/210 (81%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 ||||||||||||||||||||||||| || | || |||||||| ||| ||| |||||| Sbjct: 34818 aggaacaacaaatggtgatgccaggacacagagaatcaaacttacagaaggaactgaaca 34877 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 |||||||||| || || || || ||||||||||| || || || || || || || | | Sbjct: 34878 gatacatcccaacagcagcagcttttggaggagtttgtatcggtgcacttaccgttttgg 34937 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||| || ||||| || |||||||| || ||| | |||||||| ||||||| Sbjct: 34938 ctgatttcatgggagccatcgggtcgggaaccggaattctgttggcggtcacgatcatat 34997 Query: 442 accaatacttcgagacgttcgagaaggaaa 471 |||| || |||||||| || |||||||||| Sbjct: 34998 accagtatttcgagacctttgagaaggaaa 35027 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 153 ttccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaaagaca 212 |||||||| |||||||| | ||||||||||| | ||||| ||||| |||||||||||| Sbjct: 34624 ttccatgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagaca 34683 Query: 213 tggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaagg 264 ||||||||||| ||||| || || || |||||||| |||| |||||| |||| Sbjct: 34684 tggattgaagtctctggatcttctgctagggatgtagctaagcagctaaagg 34735
>ref|XM_424024.1| PREDICTED: Gallus gallus similar to Sec61 alpha isoform 2 (LOC426369), partial mRNA Length = 2070 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgct 251 |||||| | ||||||||||| ||||||||||| |||||||||||||||| |||||||| Sbjct: 1307 tgcgcttttttctcaaagacttggattgaagtgtctggttcatcagcaaaagatgttgcc 1366 Query: 252 aggcagctcaaggaacaacaaatggtgatg 281 | ||| ||||| ||||| |||||||||||| Sbjct: 1367 aagcaactcaaagaacagcaaatggtgatg 1396
>emb|CR391547.1| Gallus gallus finished cDNA, clone ChEST799f10 Length = 937 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgct 251 |||||| | ||||||||||| ||||||||||| |||||||||||||||| |||||||| Sbjct: 429 tgcgcttttttctcaaagacttggattgaagtgtctggttcatcagcaaaagatgttgcc 488 Query: 252 aggcagctcaaggaacaacaaatggtgatg 281 | ||| ||||| ||||| |||||||||||| Sbjct: 489 aagcaactcaaagaacagcaaatggtgatg 518
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 87.7 bits (44), Expect = 4e-14 Identities = 185/232 (79%) Strand = Plus / Minus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||||||||| || || | ||||| ||||| | | |||| ||||| Sbjct: 9105 aggaacaacaaatggtgatgccgggacacagagagtccaacttacaaaaggagctgaacc 9046 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 | |||||||| || || ||||||||||||||||| ||||| || ||||| ||||| | | Sbjct: 9045 ggtacatcccaacagcggctgcatttggaggagtgtgcatcggtgcgctcactgttttgg 8986 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 ||||||||||||| || || || || || || || || | ||||| ||||| ||||||| Sbjct: 8985 ctgatttcatgggagccattgggtcggggactggaatcttacttgcagtcacaatcatat 8926 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttctt 493 | || || || || || || |||||||||| || | ||||||||||||||| Sbjct: 8925 atcagtattttgaaacctttgagaaggaaaaagccagcgagcttggtttctt 8874 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 148 atccattccatgcgctgttctatgtggtcttcatgctgtcagcttgcgctctcttctcaa 207 ||||||||||||| ||||||||| | ||||||||||| | ||||| || || ||||||| Sbjct: 9305 atccattccatgctctgttctatatcgtcttcatgctcactgcttgtgccctattctcaa 9246 Query: 208 agacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaagg 264 | |||||||||||||| || || || || || || ||||| |||| |||||| |||| Sbjct: 9245 aaacatggattgaagtctccgggtcttctgctagagatgtagctaagcagctaaagg 9189
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 83.8 bits (42), Expect = 6e-13 Identities = 189/238 (79%) Strand = Plus / Plus Query: 262 aggaacaacaaatggtgatgccaggccatcgtgagtcaaacttggagagggagttgaaca 321 |||||||||||||||||||||| || || ||||| || |||||| ||| ||| | ||| Sbjct: 29297 aggaacaacaaatggtgatgcctggacaccgtgaatcgaacttgcagaaagagctaaacc 29356 Query: 322 gatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctag 381 ||||||||||||| ||||| ||||| ||||| | || ||||| || ||||| || | | Sbjct: 29357 gatacatccccactgctgcagcattcggaggcatttgtattggtgctctgacagtgttgg 29416 Query: 382 ctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatat 441 | ||||| ||||| ||||| |||||||| || || || ||||||| || || ||||| | Sbjct: 29417 cagattttatgggagcaataggttcagggacggggattttgcttgcagtaacgatcatct 29476 Query: 442 accaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttcttcggttt 499 | || ||||| || || || ||||||||||| || | |||||||| ||||| ||||| Sbjct: 29477 atcagtactttgaaacatttgagaaggaaagagccagtgagcttggcttctttggttt 29534 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 213 tggattgaagtttctggttcatcagcaagggatgttgc 250 |||||||| || ||||||||||| || ||||||||||| Sbjct: 28400 tggattgaggtctctggttcatctgctagggatgttgc 28437
>gb|AY064125.1| Aedes aegypti clone bR19Mc3 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 379 tagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatca 438 |||| |||||||||||||| |||||||| ||||||||||| |||| || |||||||||| Sbjct: 1442 tagccgatttcatgggtgcgatcggttccggaaccggtatcttgctggcagtcaccatca 1501 Query: 439 tataccaatacttcgaga 456 | ||||| |||||||||| Sbjct: 1502 tctaccagtacttcgaga 1519 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 190 cttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttg 249 |||||||| ||||||| ||||| |||||||| || |||||| || || | |||||||| Sbjct: 1253 cttgcgctttcttctccaagacctggattgacgtgtctggtagctccgctaaggatgttg 1312 Query: 250 ctaggcagct 259 ||| |||||| Sbjct: 1313 ctaagcagct 1322
>gb|AY064124.1| Aedes aegypti clone bR19Rc1 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 379 tagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatca 438 |||| |||||||||||||| |||||||| ||||||||||| |||| || |||||||||| Sbjct: 1442 tagccgatttcatgggtgcgatcggttccggaaccggtatcttgctggcagtcaccatca 1501 Query: 439 tataccaatacttcgaga 456 | ||||| |||||||||| Sbjct: 1502 tctaccagtacttcgaga 1519 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 190 cttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttg 249 |||||||| ||||||| ||||| |||||||| || |||||| || || | |||||||| Sbjct: 1253 cttgcgctttcttctccaagacctggattgacgtgtctggtagctccgctaaggatgttg 1312 Query: 250 ctaggcagct 259 ||| |||||| Sbjct: 1313 ctaagcagct 1322
>gb|AF392805.1|AF392805 Aedes aegypti strain RED probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2018 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 379 tagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatca 438 |||| |||||||||||||| |||||||| ||||||||||| |||| || |||||||||| Sbjct: 1472 tagccgatttcatgggtgcgatcggttccggaaccggtatcttgctggcagtcaccatca 1531 Query: 439 tataccaatacttcgaga 456 | ||||| |||||||||| Sbjct: 1532 tctaccagtacttcgaga 1549 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 190 cttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttg 249 |||||||| ||||||| ||||| |||||||| || |||||| || || | |||||||| Sbjct: 1283 cttgcgctttcttctccaagacctggattgacgtgtctggtagctccgctaaggatgttg 1342 Query: 250 ctaggcagct 259 ||| |||||| Sbjct: 1343 ctaagcagct 1352
>gb|AF326338.1|AF326338 Aedes aegypti strain MOYO-R putative transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2021 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 379 tagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatca 438 |||| |||||||||||||| |||||||| ||||||||||| |||| || |||||||||| Sbjct: 1473 tagccgatttcatgggtgcgatcggttccggaaccggtatcttgctggcagtcaccatca 1532 Query: 439 tataccaatacttcgaga 456 | ||||| |||||||||| Sbjct: 1533 tctaccagtacttcgaga 1550 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 190 cttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttg 249 |||||||| ||||||| ||||| |||||||| || |||||| || || | |||||||| Sbjct: 1284 cttgcgctttcttctccaagacctggattgacgtgtctggtagctccgctaaggatgttg 1343 Query: 250 ctaggcagct 259 ||| |||||| Sbjct: 1344 ctaagcagct 1353
>ref|NM_016906.2| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3040 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1355 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1414 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1415 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1474 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1475 cagtactttgaga 1487
>gb|BC006020.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone IMAGE:3488736) Length = 2641 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 939 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 998 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 999 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1058 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1059 cagtactttgaga 1071
>gb|BC094530.1| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:105264 IMAGE:7320508), complete cds Length = 3061 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| ||||| || || || || | |||||||| || || ||||||| ||| Sbjct: 1353 tacatccccacagctgcagccttcggtgggctgtgcattggggccctctctgtcctggct 1412 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 |||||| ||||||| ||||| || || ||||| || ||||| |||||||||||||| ||| Sbjct: 1413 gatttcctgggtgctatcgggtctggcaccgggatcctgctggcggtcaccatcatctac 1472 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1473 cagtactttgaga 1485
>ref|NM_199256.2| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3061 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| ||||| || || || || | |||||||| || || ||||||| ||| Sbjct: 1353 tacatccccacagctgcagccttcggtgggctgtgcattggggccctctctgtcctggct 1412 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 |||||| ||||||| ||||| || || ||||| || ||||| |||||||||||||| ||| Sbjct: 1413 gatttcctgggtgctatcgggtctggcaccgggatcctgctggcggtcaccatcatctac 1472 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1473 cagtactttgaga 1485
>gb|BC003707.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:5676 IMAGE:3592772), complete cds Length = 2982 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1280 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1339 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1340 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1399 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1400 cagtactttgaga 1412
>gb|M96630.1|RATSEC61B Rattus sp. sec61-like protein mRNA, complete cds Length = 1738 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| ||||| || || || || | |||||||| || || ||||||| ||| Sbjct: 1344 tacatccccacagctgcagccttcggtgggctgtgcattggggccctctctgtcctggct 1403 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 |||||| ||||||| ||||| || || ||||| || ||||| |||||||||||||| ||| Sbjct: 1404 gatttcctgggtgctatcgggtctggcaccgggatcctgctggcggtcaccatcatctac 1463 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1464 cagtactttgaga 1476
>dbj|AK153055.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120D02 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3029 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1344 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1403 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1404 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1463 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1464 cagtactttgaga 1476
>dbj|AK159349.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420017L22 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3025 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1342 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1401 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1402 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1461 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1462 cagtactttgaga 1474
>dbj|AK167484.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530016O21 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 2968 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1284 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1343 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1344 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1403 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1404 cagtactttgaga 1416
>dbj|AK088473.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018I05 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 3040 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1355 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1414 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1415 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1474 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1475 cagtactttgaga 1487
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 79289 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 79230 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 79229 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 79170 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 79169 cagtactttgaga 79157
>gb|AF222743.1|AF222743 Mus musculus Sec61 alpha-1 mRNA, complete cds Length = 1482 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1276 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1335 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1336 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1395 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1396 cagtactttgaga 1408
>gb|AF145253.1|AF145253 Mus musculus Sec61 alpha isoform 1 mRNA, complete cds Length = 1482 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1276 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1335 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1336 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1395 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1396 cagtactttgaga 1408
>dbj|AB032902.1| Mus musculus Sec61 mRNA, complete cds Length = 1804 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| || || || ||||| || | |||||||| || || ||||||| ||| Sbjct: 1366 tacatccccacagccgcagcctttggtgggctgtgcattggggccctctctgtcctggct 1425 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| ||||||| ||||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 1426 gacttcctgggtgctatcgggtctggaactgggatcctgcttgcggtcaccatcatctac 1485 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1486 cagtactttgaga 1498
>emb|BX027220.1|CNS08T60 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 387 ttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaa 446 ||||||||||| ||||| || || |||||||| ||||| || ||||||||||| ||||| Sbjct: 251 ttcatgggtgcgatcggctccggcaccggtatcctgctggccgtcaccatcatctaccag 310 Query: 447 tacttcgaga 456 |||||||||| Sbjct: 311 tacttcgaga 320
>ref|XM_319948.2| Anopheles gambiae str. PEST ENSANGP00000016786 (ENSANGG00000014297), partial mRNA Length = 1431 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 387 ttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaa 446 ||||||||||| ||||| || || |||||||| ||||| || ||||||||||| ||||| Sbjct: 1309 ttcatgggtgcgatcggctccggcaccggtatcctgctggccgtcaccatcatctaccag 1368 Query: 447 tacttcgaga 456 |||||||||| Sbjct: 1369 tacttcgaga 1378
>ref|NM_001040504.1| Bos taurus Sec61 alpha form 1 (SEC61A1), mRNA Length = 1634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 375 gtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcacc 434 ||||| ||||| ||| |||| || ||||| || |||||||| || ||||| ||||||||| Sbjct: 1319 gtcctcgctgacttcttgggcgccatcgggtctggaaccgggatcctgctggcggtcacc 1378 Query: 435 atcatataccaatacttcgagacgttcgagaagga 469 ||||| ||||| ||||| |||| |||| |||||| Sbjct: 1379 atcatctaccagtactttgagatcttcgtgaagga 1413
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 411 accggtatactgcttgcggtcaccatcatataccaatacttcgagacgttcgagaagga 469 |||||||| ||||| || || |||||||| ||||| ||||||||||||| ||||||||| Sbjct: 43476 accggtatcctgctggctgtgaccatcatttaccagtacttcgagacgtacgagaagga 43534
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 411 accggtatactgcttgcggtcaccatcatataccaatacttcgagacgttcgagaagga 469 |||||||| ||||| || || |||||||| ||||| ||||||||||||| ||||||||| Sbjct: 22189 accggtatcctgctggctgtgaccatcatttaccagtacttcgagacgtacgagaagga 22247
>gb|BT020701.1| Bos taurus Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA, complete cds Length = 1634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 375 gtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcacc 434 ||||| ||||| ||| |||| || ||||| || |||||||| || ||||| ||||||||| Sbjct: 1319 gtcctcgctgacttcttgggcgccatcgggtctggaaccgggatcctgctggcggtcacc 1378 Query: 435 atcatataccaatacttcgagacgttcgagaagga 469 ||||| ||||| ||||| |||| |||| |||||| Sbjct: 1379 atcatctaccagtactttgagatcttcgtgaagga 1413
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 176 cttcatgctgtcagcttgcgctctcttctcaaagacatggattgaagtttctgg 229 |||||||||| ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 1923524 cttcatgctggttgcttgcgctctcttctccaagacctggattgaagtctctgg 1923471
>dbj|AK071224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B12, full insert sequence Length = 1692 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 209 gacatggattgaagtttctggttcatcagcaagggatgttg 249 ||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 1126 gacatggattgaagtttctggctcatctgcaaaggatgttg 1166
>ref|XM_507657.1| PREDICTED: Pan troglodytes similar to Sec61 alpha isoform 2 (LOC450305), mRNA Length = 1714 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1404 tcttctctaagacatggattgaagtgtctggttcctcagc 1443 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 1529 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 1572
>ref|NM_018144.2| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae) (SEC61A2), mRNA Length = 1892 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1209 tcttctctaagacatggattgaagtgtctggttcctcagc 1248 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 1334 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 1377
>gb|BC045117.1| Xenopus laevis protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:53497 IMAGE:5572471), complete cds Length = 1894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgc 250 ||||||||||||| ||||||||||| ||||| || || |||| ||||||||| Sbjct: 1201 tcttctcaaagacctggattgaagtgtctggctcttctgcaaaggatgttgc 1252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 321 agatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtccta 380 ||||||||||| || |||||||| |||||||| | ||||| || || || ||||||| Sbjct: 1323 agatacatcccaacagctgctgcttttggaggtctttgcatcggagcactctctgtcctg 1382 Query: 381 gctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcat 439 || |||||| |||| || || ||||| ||||| ||||| ||| | || ||||||||||| Sbjct: 1383 gcagatttcctgggagccattggttctggaacaggtatcctgttggctgtcaccatcat 1441
>gb|AY103473.1| Hemitripterus americanus Sec61-alpha mRNA, complete cds Length = 1536 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtc 377 ||||| ||||||||||| |||||||| ||||| || ||||||| || | |||| ||||| Sbjct: 1299 aacaggtacatccccacagctgctgcctttggtggcctctgcataggagggctgtctgtc 1358 Query: 378 ctagctgatttcatgggtgcaatcggttcagg 409 | ||||| ||| ||||||| || |||||||| Sbjct: 1359 atggctgacttcctgggtgccattggttcagg 1390
>emb|CR925994.1| Pongo pygmaeus mRNA; cDNA DKFZp459O1320 (from clone DKFZp459O1320) Length = 2508 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1289 tcttctctaagacatggattgaagtgtctggttcctcagc 1328 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 ||||| |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 1408 aacaggtacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 1457
>gb|BC026179.1| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA clone MGC:32910 IMAGE:4823130), complete cds Length = 2220 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1218 tcttctctaagacatggattgaagtgtctggttcctcagc 1257
>emb|CR607709.1| full-length cDNA clone CS0DE010YO18 of Placenta of Homo sapiens (human) Length = 1710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 508 tcttctctaagacatggattgaagtgtctggttcctcagc 547 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 633 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 676
>dbj|AK057532.1| Homo sapiens cDNA FLJ32970 fis, clone TESTI2008840, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1342 tcttctctaagacatggattgaagtgtctggttcctcagc 1381
>dbj|AK022027.1| Homo sapiens cDNA FLJ11965 fis, clone HEMBB1001112, moderately similar to Homo sapiens sec61 homolog mRNA Length = 1334 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 651 tcttctctaagacatggattgaagtgtctggttcctcagc 690 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 776 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 819
>dbj|AK022640.1| Homo sapiens cDNA FLJ12578 fis, clone NT2RM4001054, moderately similar to Homo sapiens sec61 homolog mRNA Length = 2026 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1203 tcttctctaagacatggattgaagtgtctggttcctcagc 1242
>dbj|AK001440.1| Homo sapiens cDNA FLJ10578 fis, clone NT2RP2003433, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 1186 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 503 tcttctctaagacatggattgaagtgtctggttcctcagc 542 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 628 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 671
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 157957 tcttctctaagacatggattgaagtgtctggttcctcagc 157996 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 161151 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 161194
>gb|AF346603.1|AF346603 Homo sapiens Sec61 alpha form 2 mRNA, complete cds Length = 1893 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagc 238 ||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1209 tcttctctaagacatggattgaagtgtctggttcctcagc 1248 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgc 367 |||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 1334 tacatccccaccgcagctgcgtttggcggtttgtgcattggcgc 1377
>ref|XM_797003.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 8 (LOC576070), mRNA Length = 2918 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1215 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1274 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1275 tgaaggaacaacagatggtgatg 1297 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1415 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1472
>ref|XM_796992.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 7 (LOC576070), mRNA Length = 2924 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1221 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1280 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1281 tgaaggaacaacagatggtgatg 1303 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1421 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1478
>ref|XM_796979.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 6 (LOC576070), mRNA Length = 2912 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1209 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1268 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1269 tgaaggaacaacagatggtgatg 1291 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1409 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1466
>ref|XM_796967.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 5 (LOC576070), mRNA Length = 2726 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1023 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1082 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1083 tgaaggaacaacagatggtgatg 1105 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1223 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1280
>ref|XM_796949.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 4 (LOC576070), mRNA Length = 2921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1218 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1277 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1278 tgaaggaacaacagatggtgatg 1300 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1418 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1475
>ref|XM_796930.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 3 (LOC576070), mRNA Length = 2845 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1142 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1201 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1202 tgaaggaacaacagatggtgatg 1224 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1342 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1399
>ref|XM_796907.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 2 (LOC576070), mRNA Length = 2374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 671 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 730 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 731 tgaaggaacaacagatggtgatg 753 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 871 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 928
>ref|XM_775245.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 1 (LOC576070), mRNA Length = 2924 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||| ||||| ||||| || || ||||| || | ||||||||||| || | Sbjct: 1221 tcttctccaagacctggatcgaagtctcaggatcatctgccaaggatgttgctaaacaac 1280 Query: 259 tcaaggaacaacaaatggtgatg 281 | ||||||||||| ||||||||| Sbjct: 1281 tgaaggaacaacagatggtgatg 1303 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct: 1421 atcggctctggaacaggtatcctgctggctgtcactatcatctaccaatactttgaga 1478
>gb|BC044351.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:55256 IMAGE:3815921), complete cds Length = 2605 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 |||| |||||||| ||||||||||||||||| || || || | ||||| |||| ||||| Sbjct: 1228 tcttttcaaagacctggattgaagtttctggatcttctgccaaagatgtagctaagcagc 1287 Query: 259 tcaaggaacaacaaatggtgatg 281 | || ||||| || ||||||||| Sbjct: 1288 tgaaagaacagcagatggtgatg 1310 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttgg 349 ||||||||||||||||| || ||||||||||| Sbjct: 1347 aacagatacatccccacagcggctgcatttgg 1378
>gb|BC066715.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:76848 IMAGE:6960771), complete cds Length = 2580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 |||| |||||||| ||||||||||||||||| || || || | ||||| |||| ||||| Sbjct: 1186 tcttttcaaagacctggattgaagtttctggatcttctgccaaagatgtagctaagcagc 1245 Query: 259 tcaaggaacaacaaatggtgatg 281 | || ||||| || ||||||||| Sbjct: 1246 tgaaagaacagcagatggtgatg 1268 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttgg 349 ||||||||||||||||| || ||||||||||| Sbjct: 1305 aacagatacatccccacagcggctgcatttgg 1336
>gb|AY029527.1| Danio rerio Sec61 alpha form A mRNA, complete cds Length = 2602 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 |||| |||||||| ||||||||||||||||| || || || | ||||| |||| ||||| Sbjct: 1246 tcttttcaaagacctggattgaagtttctggatcttctgccaaagatgtagctaagcagc 1305 Query: 259 tcaaggaacaacaaatggtgatg 281 | || ||||| || ||||||||| Sbjct: 1306 tgaaagaacagcagatggtgatg 1328 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttgg 349 ||||||||||||||||| || ||||||||||| Sbjct: 1365 aacagatacatccccacagcggctgcatttgg 1396
>ref|NM_153659.1| Danio rerio SEC61, alpha subunit (sec61a), mRNA Length = 2602 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 |||| |||||||| ||||||||||||||||| || || || | ||||| |||| ||||| Sbjct: 1246 tcttttcaaagacctggattgaagtttctggatcttctgccaaagatgtagctaagcagc 1305 Query: 259 tcaaggaacaacaaatggtgatg 281 | || ||||| || ||||||||| Sbjct: 1306 tgaaagaacagcagatggtgatg 1328 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttgg 349 ||||||||||||||||| || ||||||||||| Sbjct: 1365 aacagatacatccccacagcggctgcatttgg 1396
>emb|CR860842.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0814 (from clone DKFZp469H0814) Length = 3582 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 375 gtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcacc 434 ||||| ||||| ||| ||||||| || || || |||||||| || ||||| || |||||| Sbjct: 1409 gtcctggctgacttcctgggtgccattgggtccggaaccgggatcctgctcgcagtcacc 1468 Query: 435 atcatataccaatacttcgaga 456 ||||| ||||| ||||| |||| Sbjct: 1469 atcatctaccagtactttgaga 1490
>emb|CR859335.1| Pongo pygmaeus mRNA; cDNA DKFZp469D1920 (from clone DKFZp469D1920) Length = 3576 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 375 gtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcacc 434 ||||| ||||| ||| ||||||| || || || |||||||| || ||||| || |||||| Sbjct: 1408 gtcctggctgacttcctgggtgccattgggtccggaaccgggatcctgctcgcagtcacc 1467 Query: 435 atcatataccaatacttcgaga 456 ||||| ||||| ||||| |||| Sbjct: 1468 atcatctaccagtactttgaga 1489
>emb|CR860233.1| Pongo pygmaeus mRNA; cDNA DKFZp469P1019 (from clone DKFZp469P1019) Length = 2792 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 375 gtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcacc 434 ||||| ||||| ||| ||||||| || || || |||||||| || ||||| || |||||| Sbjct: 629 gtcctggctgacttcctgggtgccattgggtccggaaccgggatcctgctcgcagtcacc 688 Query: 435 atcatataccaatacttcgaga 456 ||||| ||||| ||||| |||| Sbjct: 689 atcatctaccagtactttgaga 710
>ref|NM_070392.3| Caenorhabditis elegans Y57G11C.15 (Y57G11C.15) mRNA, complete cds Length = 1811 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 387 ttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaa 446 |||||||| || ||||| || |||||||| || || || || ||||| ||||| |||||| Sbjct: 1384 ttcatgggagctatcggatccggaaccggaatccttctcgccgtcacgatcatctaccaa 1443 Query: 447 tacttcgaga 456 |||||||||| Sbjct: 1444 tacttcgaga 1453
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence Length = 313573 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 387 ttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaa 446 |||||||| || ||||| || |||||||| || || || || ||||| ||||| |||||| Sbjct: 185689 ttcatgggagctatcggatccggaaccggaatccttctcgccgtcacgatcatctaccaa 185630 Query: 447 tacttcgaga 456 |||||||||| Sbjct: 185629 tacttcgaga 185620
>ref|NM_201577.1| Danio rerio SEC61, beta subunit (sec61b), mRNA Length = 2550 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatc 235 ||||||||||||| |||||||||||||| || ||||| Sbjct: 1189 tcttctcaaagacctggattgaagtttccggatcatc 1225
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatc 235 ||||||||||||| |||||||||||||| || ||||| Sbjct: 81946 tcttctcaaagacctggattgaagtttccggatcatc 81982
>ref|XM_950433.1| Theileria annulata strain Ankara pre-protein translocase (TA17425) partial mRNA Length = 1395 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 414 ggtatactgcttgcggtcaccatcatataccaatact 450 ||||| |||||||| ||||||||||| |||||||||| Sbjct: 1306 ggtattctgcttgccgtcaccatcatctaccaatact 1342
>ref|XM_660476.1| Cryptosporidium hominis TU502 Pfsec61 (Chro.70118) partial mRNA Length = 1422 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 195 gctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctagg 254 ||||||||||| || || ||||||||||| ||||| || || |||| ||||||||| | Sbjct: 1120 gctctcttctccaaaacttggattgaagtatctggatcttctgcaaaggatgttgcgaaa 1179 Query: 255 cagctcaaggaacaacaaatg 275 ||||||| || ||||||||| Sbjct: 1180 cagctcagagatcaacaaatg 1200
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 199 tcttctcaaagacatggattgaagtttctggttcatc 235 ||||||||||||| |||||||||||||| || ||||| Sbjct: 87098 tcttctcaaagacctggattgaagtttccggatcatc 87062
>gb|AY034614.1| Danio rerio Sec61 alpha form B mRNA, complete cds Length = 2550 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatc 235 ||||||||||||| |||||||||||||| || ||||| Sbjct: 1189 tcttctcaaagacctggattgaagtttccggatcatc 1225
>gb|BC048881.1| Danio rerio SEC61, beta subunit, mRNA (cDNA clone MGC:55672 IMAGE:3815496), complete cds Length = 2396 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatc 235 ||||||||||||| |||||||||||||| || ||||| Sbjct: 1190 tcttctcaaagacctggattgaagtttccggatcatc 1226
>ref|NM_106519.1| Arabidopsis thaliana protein translocase AT1G78720 mRNA, complete cds Length = 1428 Score = 48.1 bits (24), Expect = 0.033 Identities = 102/128 (79%) Strand = Plus / Plus Query: 372 actgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtc 431 |||||| | |||||||| ||||| || || || ||||| || || || || |||||||| Sbjct: 1297 actgtcttggctgatttaatgggagctattgggtcaggcactggaatccttcttgcggtt 1356 Query: 432 accatcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttc 491 || |||||||| || || ||||| || ||||| || |||| || | |||||| |||||| Sbjct: 1357 acaatcatatatcagtatttcgaaaccttcgaaaaagaaaaagcaagcgagctaggtttc 1416 Query: 492 ttcggttt 499 |||||||| Sbjct: 1417 ttcggttt 1424
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 48.1 bits (24), Expect = 0.033 Identities = 102/128 (79%) Strand = Plus / Minus Query: 372 actgtcctagctgatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtc 431 |||||| | |||||||| ||||| || || || ||||| || || || || |||||||| Sbjct: 70510 actgtcttggctgatttaatgggagctattgggtcaggcactggaatccttcttgcggtt 70451 Query: 432 accatcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtttc 491 || |||||||| || || ||||| || ||||| || |||| || | |||||| |||||| Sbjct: 70450 acaatcatatatcagtatttcgaaaccttcgaaaaagaaaaagcaagcgagctaggtttc 70391 Query: 492 ttcggttt 499 |||||||| Sbjct: 70390 ttcggttt 70383
>ref|XM_875170.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 11 (LOC614128), mRNA Length = 2468 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1254 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1313 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1314 caacaaatggt 1324
>ref|XM_875091.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 10 (LOC614128), mRNA Length = 2477 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1263 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1322 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1323 caacaaatggt 1333
>ref|XM_875004.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 9 (LOC614128), mRNA Length = 2474 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1260 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1319 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1320 caacaaatggt 1330
>ref|XM_874932.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 8 (LOC614128), mRNA Length = 2492 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1278 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1337 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1338 caacaaatggt 1348
>ref|XM_874850.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 7 (LOC614128), mRNA Length = 2474 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1260 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1319 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1320 caacaaatggt 1330
>ref|XM_874762.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 6 (LOC614128), mRNA Length = 2477 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1263 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1322 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1323 caacaaatggt 1333
>ref|XM_874677.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 5 (LOC614128), mRNA Length = 2282 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1068 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1127 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1128 caacaaatggt 1138
>ref|XM_874591.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 4 (LOC614128), mRNA Length = 2165 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 951 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1010 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1011 caacaaatggt 1021
>ref|XM_864860.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1 (LOC614128), mRNA Length = 2480 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1266 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1325 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1326 caacaaatggt 1336
>ref|XM_874348.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 2 (LOC614128), mRNA Length = 1893 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 679 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 738 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 739 caacaaatggt 749
>gb|AY365136.1| Aspergillus awamori putative SEC61 mRNA, partial cds Length = 935 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 176 cttcatgctgtcagcttgcgctctcttctcaaagacatggattgaagtttc 226 |||||||||| ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 484 cttcatgctggttgcttgtgctctcttctccaagacctggattgaggtttc 534
>gb|BC112848.1| Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1, mRNA (cDNA clone MGC:137488 IMAGE:8168173), complete cds Length = 1924 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagctcaaggaa 266 ||||| ||||| || || |||||||| ||||||| ||||| |||| ||||| || ||| Sbjct: 1239 aagacgtggatagaggtgtctggttcctcagcaaaagatgtagctaaacagcttaaagaa 1298 Query: 267 caacaaatggt 277 ||||||||||| Sbjct: 1299 caacaaatggt 1309
>gb|AF346600.1|AF346600 Oncorhynchus mykiss Sec61 alpha form A mRNA, complete cds Length = 1643 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 199 tcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctaggcagc 258 ||||||| ||||||||||| || ||||| || || || || | ||||| |||| ||||| Sbjct: 1166 tcttctccaagacatggatcgaggtttcgggatcctctgccaaagatgtggctaagcagc 1225 Query: 259 tcaaggaacaacaaatggtgatg 281 | |||||||| || ||||||||| Sbjct: 1226 tgaaggaacagcagatggtgatg 1248 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 ttcagtggcaacttcctggttaacct 43 ||||| |||||||||||||||||||| Sbjct: 979 ttcagcggcaacttcctggttaacct 1004
>ref|XM_642709.1| Dictyostelium discoideum hypothetical protein (DDB0206262), partial mRNA Length = 1428 Score = 44.1 bits (22), Expect = 0.52 Identities = 61/74 (82%) Strand = Plus / Plus Query: 333 accgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagctgatttcatg 392 |||||||| || ||||| || |||| ||||| || || |||||| | || ||||||||| Sbjct: 1252 accgctgccgcttttggtggtctctgtattggtgctctcactgtcgtcgccgatttcatg 1311 Query: 393 ggtgcaatcggttc 406 ||||| |||||||| Sbjct: 1312 ggtgccatcggttc 1325
>gb|BC074553.1| Xenopus tropicalis MGC69436 protein, mRNA (cDNA clone MGC:69436 IMAGE:5335742), complete cds Length = 1986 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 agatacatccccaccgctgctgcatttggaggagtctgcattggcgcgct 370 ||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 1317 agatacatcccaaccgcggctgcttttggaggtctttgcattggagcgct 1366 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 174 gtcttcatgctgtcagcttgcgctctcttctcaaagacatggattgaagtttctggttca 233 |||||||||||| | | ||||| ||||||| ||||| ||||| ||||| ||||| || Sbjct: 1170 gtcttcatgctgggatcctgcgcattcttctccaagacctggatagaagtgtctggctct 1229 Query: 234 tcagcaagggatgttgc 250 || |||| ||||||||| Sbjct: 1230 tctgcaaaggatgttgc 1246
>ref|XM_504248.1| Yarrowia lipolytica CLIB122, YALI0E21912g predicted mRNA Length = 1416 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgc 367 ||||||||||||||| || |||||||||| | ||||||||| Sbjct: 1248 catccccaccgctgcagcttttggaggagccaccattggcgc 1289
>gb|AY103475.1| Gadus ogac Sec61-alpha mRNA, complete cds Length = 2483 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 399 atcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatacttcgaga 456 ||||| ||||| ||||| || ||||| || ||||||||||| ||||| ||||| |||| Sbjct: 1427 atcggctcaggcaccggcatcctgctggccgtcaccatcatctaccagtactttgaga 1484 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 318 aacagatacatccccaccgctgctgcatttgg 349 ||||| |||||||||||||| ||||| ||||| Sbjct: 1346 aacaggtacatccccaccgccgctgcctttgg 1377
>emb|Y11322.1|YLSEC61 Y.lipolytica SEC61 gene Length = 2185 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgc 367 ||||||||||||||| || |||||||||| | ||||||||| Sbjct: 1790 catccccaccgctgcagcttttggaggagccaccattggcgc 1831
>gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome 13, complete sequence Length = 205903 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 agtggcaacttcctggttaacc 42 |||||||||||||||||||||| Sbjct: 72583 agtggcaacttcctggttaacc 72604
>ref|NM_001004801.2| Xenopus tropicalis MGC69436 protein (MGC69436), mRNA Length = 2352 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 agatacatccccaccgctgctgcatttggaggagtctgcattggcgcgct 370 ||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 1312 agatacatcccaaccgcggctgcttttggaggtctttgcattggagcgct 1361 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 174 gtcttcatgctgtcagcttgcgctctcttctcaaagacatggattgaagtttctggttca 233 |||||||||||| | | ||||| ||||||| ||||| ||||| ||||| ||||| || Sbjct: 1165 gtcttcatgctgggatcctgcgcattcttctccaagacctggatagaagtgtctggctct 1224 Query: 234 tcagcaagggatgttgc 250 || |||| ||||||||| Sbjct: 1225 tctgcaaaggatgttgc 1241
>gb|AC154847.2| Mus musculus BAC clone RP23-38J13 from chromosome 13, complete sequence Length = 200027 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 agtggcaacttcctggttaacc 42 |||||||||||||||||||||| Sbjct: 181523 agtggcaacttcctggttaacc 181544
>gb|AF346601.1|AF346601 Oncorhynchus mykiss Sec61 alpha form B mRNA, complete cds Length = 1528 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 ttcagtggcaacttcctggttaacct 43 |||||||| ||||||||||||||||| Sbjct: 953 ttcagtggtaacttcctggttaacct 978 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 391 tgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatataccaatact 450 ||||||| || || || ||||| ||||| ||||| || ||||||||||| ||||| |||| Sbjct: 1332 tgggtgctattggctcgggaacgggtatcctgctggccgtcaccatcatctaccagtact 1391 Query: 451 t 451 | Sbjct: 1392 t 1392
>emb|CR848298.2| Xenopus tropicalis finished cDNA, clone TNeu057c05 Length = 2352 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 agatacatccccaccgctgctgcatttggaggagtctgcattggcgcgct 370 ||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 1312 agatacatcccaaccgcggctgcttttggaggtctttgcattggagcgct 1361 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 174 gtcttcatgctgtcagcttgcgctctcttctcaaagacatggattgaagtttctggttca 233 |||||||||||| | | ||||| ||||||| ||||| ||||| ||||| ||||| || Sbjct: 1165 gtcttcatgctgggatcctgcgcattcttctccaagacctggatagaagtgtctggctct 1224 Query: 234 tcagcaagggatgttgc 250 || |||| ||||||||| Sbjct: 1225 tctgcaaaggatgttgc 1241
>emb|CT033490.1| Platynereis dumerilii EST IB0AAA19BF11EM1 Length = 925 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctgg 229 |||||| ||||||| |||||||||||||| || ||||| Sbjct: 288 tgcgctttcttctcgaagacatggattgaggtgtctgg 325
>emb|CT032924.1| Platynereis dumerilii EST IB0AAA29CB07EM1 Length = 890 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctgg 229 |||||| ||||||| |||||||||||||| || ||||| Sbjct: 604 tgcgctttcttctccaagacatggattgaggtgtctgg 641
>emb|CT032824.1| Platynereis dumerilii EST IB0AAA30DC12FM1 Length = 836 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctgg 229 |||||| ||||||| |||||||||||||| || ||||| Sbjct: 831 tgcgctttcttctcgaagacatggattgaggtgtctgg 794
>emb|CT032820.1| Platynereis dumerilii EST IB0AAA30DF04EM1 Length = 803 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 192 tgcgctctcttctcaaagacatggattgaagtttctgg 229 |||||| ||||||| |||||||||||||| || ||||| Sbjct: 405 tgcgctttcttctcgaagacatggattgaggtgtctgg 442
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 326 catccccaccgctgctgcatttggaggagtctgcattggcgc 367 ||||||||||||||| || |||||||||| | ||||||||| Sbjct: 2586928 catccccaccgctgcagcttttggaggagccaccattggcgc 2586969
>gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, complete sequence Length = 208311 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 tttctggttcatcagcaagggatgt 247 ||||||||||| ||||||||||||| Sbjct: 180986 tttctggttcaccagcaagggatgt 180962
>gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, complete sequence Length = 211603 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 tttctggttcatcagcaagggatgt 247 ||||||||||| ||||||||||||| Sbjct: 205896 tttctggttcaccagcaagggatgt 205872
>ref|XM_446067.1| Candida glabrata CBS138, CAGL0F02167g partial mRNA Length = 2688 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gtcaccatcatataccaatac 449 ||||||||||||||||||||| Sbjct: 222 gtcaccatcatataccaatac 242
>gb|AC140104.22| Medicago truncatula clone mth2-10g22, complete sequence Length = 127043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gatgttgtcgcaaatccattc 155 ||||||||||||||||||||| Sbjct: 117016 gatgttgtcgcaaatccattc 117036
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gtcaccatcatataccaatac 449 ||||||||||||||||||||| Sbjct: 218546 gtcaccatcatataccaatac 218526
>gb|AC142395.41| Medicago truncatula clone mth2-18g1, complete sequence Length = 110556 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gatgttgtcgcaaatccattc 155 ||||||||||||||||||||| Sbjct: 76544 gatgttgtcgcaaatccattc 76564
>gb|AC124971.15| Medicago truncatula clone mth2-22h8, complete sequence Length = 122754 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gatgttgtcgcaaatccattc 155 ||||||||||||||||||||| Sbjct: 45822 gatgttgtcgcaaatccattc 45842
>gb|AF159251.1|AF159251 Candida glabrata MSH4 (MSH4) gene, complete cds Length = 3022 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gtcaccatcatataccaatac 449 ||||||||||||||||||||| Sbjct: 408 gtcaccatcatataccaatac 428
>ref|XM_628281.1| Cryptosporidium parvum Iowa II putative Sec61 (cgd7_950), partial mRNA Length = 1422 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 195 gctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttgctagg 254 ||||||||||| || || ||||| ||||| ||||| || || |||| ||||||||| | | Sbjct: 1120 gctctcttctccaaaacctggatcgaagtatctggatcttctgcaaaggatgttgcgaag 1179 Query: 255 cagctcaaggaacaacaaatg 275 || |||| || ||||||||| Sbjct: 1180 caactcagagatcaacaaatg 1200
>gb|AF233343.1|AF233343 Candida glabrata Msh4p-related protein, Mnm4-related protein, centromere binding protein 1 (CBF1), and serin/threonin kinase genes, complete cds; and unknown gene Length = 11541 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gtcaccatcatataccaatac 449 ||||||||||||||||||||| Sbjct: 4294 gtcaccatcatataccaatac 4274
>gb|AC109224.16| Mus musculus chromosome 5, clone RP23-150I2, complete sequence Length = 202994 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 tttctggttcatcagcaagggatgt 247 ||||||||||| ||||||||||||| Sbjct: 178187 tttctggttcaccagcaagggatgt 178211
>gb|AY610173.1| Sus scrofa clone Clu_85032.scr.msk.p1.Contig1, mRNA sequence Length = 1950 Score = 42.1 bits (21), Expect = 2.0 Identities = 105/133 (78%) Strand = Plus / Plus Query: 324 tacatccccaccgctgctgcatttggaggagtctgcattggcgcgctgactgtcctagct 383 ||||||||||| ||||| || ||||| || | ||||| || || || | ||||| ||| Sbjct: 1331 tacatccccactgctgcggcctttggtgggctgtgcatcggggccctctccgtcctggct 1390 Query: 384 gatttcatgggtgcaatcggttcaggaaccggtatactgcttgcggtcaccatcatatac 443 || ||| |||| || ||||| || ||||| || || ||||| ||||| |||||||| ||| Sbjct: 1391 gacttcctgggcgccatcgggtctggaactgggatcctgctcgcggttaccatcatctac 1450 Query: 444 caatacttcgaga 456 || ||||| |||| Sbjct: 1451 cagtactttgaga 1463
>gb|AY722921.2| Borrelia garinii PBi variable plasmid segment G1a34h09.s1, WORKING DRAFT SEQUENCE Length = 14531 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 agattcagaaattgtagcag 595 |||||||||||||||||||| Sbjct: 5984 agattcagaaattgtagcag 5965
>ref|NM_021305.2| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae) (Sec61a2), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1219 aagacgtggatagaagtttctggttcttcagc 1250
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 tcaaacttggagagggagttgaacagat 324 |||||| ||||| ||||||||||||||| Sbjct: 132550 tcaaacatggagcgggagttgaacagat 132523
>gb|BC005458.1| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae), mRNA (cDNA clone MGC:6359 IMAGE:3494001), complete cds Length = 2139 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1162 aagacgtggatagaagtttctggttcttcagc 1193
>emb|AL590453.10| Human DNA sequence from clone RP11-294K17 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 187461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 agtgatatggtgctatggct 533 |||||||||||||||||||| Sbjct: 133766 agtgatatggtgctatggct 133747
>emb|AL513165.12| Human DNA sequence from clone RP11-613M10 on chromosome 9 Contains part of a novel gene, the FBXO10 gene (FBX10) for F-box only protein 10, two novel genes, a RAB1B (member RAS oncogene family) pseudogene the 5' end of a novel gene (KIAA0967) and three CpG islands, complete sequence Length = 194976 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 tttggaggagtctgcattgg 364 |||||||||||||||||||| Sbjct: 158987 tttggaggagtctgcattgg 159006
>gb|AY113841.1| Dissostichus mawsoni Sec61 (SEC61) mRNA, complete cds Length = 1441 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tgaacagatacatccccaccgctgctgc 343 ||||||| ||||||||||| |||||||| Sbjct: 1238 tgaacaggtacatccccacagctgctgc 1265
>gb|AY103472.1| Notothenia angustata Sec61-alpha mRNA, complete cds Length = 1549 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tgaacagatacatccccaccgctgctgc 343 ||||||| ||||||||||| |||||||| Sbjct: 1311 tgaacaggtacatccccacagctgctgc 1338
>gb|AY103471.1| Pagothenia borchgrevinki Sec61-alpha mRNA, complete cds Length = 1550 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tgaacagatacatccccaccgctgctgc 343 ||||||| ||||||||||| |||||||| Sbjct: 1311 tgaacaggtacatccccacagctgctgc 1338
>gb|DQ282244.1| Uncultured bacterium clone MONA-Int-A3 unnamed integron integrase gene, partial cds Length = 489 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 cgagaaggaaagggcgaccg 480 |||||||||||||||||||| Sbjct: 43 cgagaaggaaagggcgaccg 62
>dbj|AK160602.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610019K07 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2362 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1203 aagacgtggatagaagtttctggttcttcagc 1234
>dbj|AK077701.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730536E22 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2369 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1219 aagacgtggatagaagtttctggttcttcagc 1250
>dbj|AK017615.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730434P03 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2111 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1003 aagacgtggatagaagtttctggttcttcagc 1034
>gb|AF222748.1|AF222748 Mus musculus Sec61 alpha-2 mRNA, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1156 aagacgtggatagaagtttctggttcttcagc 1187
>gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Human BAC Library) complete sequence Length = 202879 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 agggagttgaacagatacat 328 |||||||||||||||||||| Sbjct: 36660 agggagttgaacagatacat 36679
>ref|XM_341558.2| PREDICTED: Rattus norvegicus Sec61, alpha subunit 2 (S. cerevisiae) (predicted) (Sec61a2_predicted), mRNA Length = 2169 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1331 aagacgtggatagaagtttctggttcctcagc 1362
>gb|AF145254.1|AF145254 Mus musculus Sec61 alpha isoform 2 mRNA, complete cds Length = 1487 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 1155 aagacgtggatagaagtttctggttcttcagc 1186
>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 207 aagacatggattgaagtttctggttcatcagc 238 ||||| ||||| |||||||||||||| ||||| Sbjct: 88211 aagacgtggatagaagtttctggttcttcagc 88180
>emb|X13170.1|MMCD11 Mouse CD1.1 gene fragment for CD1 surface antigen Length = 2002 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 tcaaacttggagagggagttgaacagat 324 |||||| ||||| ||||||||||||||| Sbjct: 1974 tcaaacatggagcgggagttgaacagat 2001
>gb|AC018814.6| Homo sapiens chromosome 3 clone RP11-204C23 map 3p, complete sequence Length = 166162 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ttcggtttttgatcaaggac 511 |||||||||||||||||||| Sbjct: 19512 ttcggtttttgatcaaggac 19493 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,768,604 Number of Sequences: 3902068 Number of extensions: 4768604 Number of successful extensions: 100986 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 100482 Number of HSP's gapped (non-prelim): 479 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
