ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4k11 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 222 bits (565), Expect = 5e-58 Identities = 108/118 (91%), Positives = 113/118 (95%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN Sbjct: 215 IKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKEN 274 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 VKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 275 VKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 221 bits (562), Expect = 1e-57 Identities = 107/118 (90%), Positives = 113/118 (95%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 VKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGDEEEL KEN Sbjct: 212 VKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKEN 271 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 +K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE Sbjct: 272 IKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 218 bits (556), Expect = 6e-57 Identities = 106/118 (89%), Positives = 112/118 (94%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN Sbjct: 212 IKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKEN 271 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 VKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 272 VKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 216 bits (551), Expect = 2e-56 Identities = 113/120 (94%), Positives = 114/120 (95%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 VKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEEELAKEN Sbjct: 209 VKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKEN 267 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 361 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKIQGVWYAQLESN Sbjct: 268 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 214 bits (546), Expect = 9e-56 Identities = 105/119 (88%), Positives = 113/119 (94%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGDEEEL KEN Sbjct: 211 IKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKEN 270 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 358 K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES Sbjct: 271 NKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 213 bits (543), Expect = 2e-55 Identities = 103/118 (87%), Positives = 110/118 (93%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 VKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL+KEN Sbjct: 214 VKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKEN 273 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 VKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E Sbjct: 274 VKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 213 bits (541), Expect = 3e-55 Identities = 104/118 (88%), Positives = 110/118 (93%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN Sbjct: 213 IKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKEN 272 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE Sbjct: 273 NKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 212 bits (540), Expect = 4e-55 Identities = 103/119 (86%), Positives = 110/119 (92%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN Sbjct: 215 IKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKEN 274 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 358 VKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES Sbjct: 275 VKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 211 bits (538), Expect = 7e-55 Identities = 103/118 (87%), Positives = 109/118 (92%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 VKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN Sbjct: 215 VKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKEN 274 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 VKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE Sbjct: 275 VKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 157 bits (396), Expect = 2e-38 Identities = 78/118 (66%), Positives = 88/118 (74%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQ G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KEN Sbjct: 176 IKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKEN 233 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 355 VK + G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+ Sbjct: 234 VKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 154 bits (388), Expect = 2e-37 Identities = 76/117 (64%), Positives = 87/117 (74%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +KQ G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KEN Sbjct: 177 IKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKEN 234 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 352 VK+ + G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL Sbjct: 235 VKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 153 bits (386), Expect = 3e-37 Identities = 74/117 (63%), Positives = 88/117 (75%) Frame = +2 Query: 2 VKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKEN 181 +K L+A G F G F VPSYRG++FLDPKGRGG++GYD AVALPA G D+EE AKEN Sbjct: 220 IKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKEN 277 Query: 182 VKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 352 K+ ++S G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K GVWYAQ+ Sbjct: 278 SKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 129 bits (324), Expect = 5e-30 Identities = 67/126 (53%), Positives = 86/126 (68%), Gaps = 8/126 (6%) Frame = +2 Query: 2 VKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 157 +K LVA +P F G F VPSYRG++FLDPKGRG +GYDNAVALPA + D Sbjct: 150 IKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QAD 207 Query: 158 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 337 +E+L + NVK A G I+L + K +GE+ G FES QPSDTDLGA PK+VKI+G+ Sbjct: 208 DEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGI 267 Query: 338 WYAQLE 355 +YA++E Sbjct: 268 FYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 123 bits (308), Expect = 3e-28 Identities = 64/105 (60%), Positives = 79/105 (75%) Frame = +2 Query: 38 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 217 F G F VPSYRG++FLDPKGRG +TGYDNAVALPA D+E+ A NVK G+I+ Sbjct: 171 FEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSIS 226 Query: 218 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 352 L VTK TGE+ GVF+S QPSDTDLGAK P +VKI+G++YA++ Sbjct: 227 LQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 119 bits (299), Expect = 4e-27 Identities = 66/126 (52%), Positives = 84/126 (66%), Gaps = 8/126 (6%) Frame = +2 Query: 2 VKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 157 VK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+ALP + Sbjct: 148 VKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAK 204 Query: 158 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 337 EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P +VKIQGV Sbjct: 205 EEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGV 264 Query: 338 WYAQLE 355 +YA +E Sbjct: 265 FYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 119 bits (299), Expect = 4e-27 Identities = 66/126 (52%), Positives = 84/126 (66%), Gaps = 8/126 (6%) Frame = +2 Query: 2 VKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 157 VK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+ALP + Sbjct: 148 VKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAK 204 Query: 158 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 337 EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P +VKIQGV Sbjct: 205 EEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGV 264 Query: 338 WYAQLE 355 +YA +E Sbjct: 265 FYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 112 bits (280), Expect = 6e-25 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 8/126 (6%) Frame = +2 Query: 2 VKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 157 VK LVA T +P + G + VPSYR S+FLDPK RG +TGY++AVA+P+ G D Sbjct: 150 VKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSAG--D 207 Query: 158 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 337 E+L KENVK + G I+L+V+K TGEV GVF ++QPSDTD+G K DVK+ G Sbjct: 208 AEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQ 267 Query: 338 WYAQLE 355 +Y ++E Sbjct: 268 FYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 111 bits (277), Expect = 1e-24 Identities = 55/108 (50%), Positives = 73/108 (67%) Frame = +2 Query: 38 FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 217 F G F VPSYRG+ FLDPK RG TGYDNAVALP+ + + N K G ++ Sbjct: 171 FVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLS 225 Query: 218 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 361 L VT+ TGE+ G+FES QPSDTDLGAK P DVK++G++Y +++++ Sbjct: 226 LQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 92 KGRGGSTGYDNAVALPAGGR 151 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = +2 Query: 167 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 328 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +2 Query: 128 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 304 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 305 KAP 313 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 146 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 280 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +2 Query: 50 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 214 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 215 TLSVTKSKP 241 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +2 Query: 50 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 214 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 215 TLSVTKSKP 241 T + + P Sbjct: 489 TGHLEEPMP 497
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +2 Query: 278 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 409 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -2 Query: 402 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 223 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 222 LRV---MLPVEEDAFFTF 178 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 6.8 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = +2 Query: 68 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 247 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 248 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 334 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 278 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 403 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 6.8 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -2 Query: 462 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 283 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 282 GCTLSKTPITSPVSGLL 232 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 17 ATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNAS 196 A+G PES GP + G S P G G + V G +E + + NAS Sbjct: 845 ASGGPES-GGPEHISQDNGISSSGPTGAAGMHAVTSVVTTGPDGTSMDEVSQQSTLSNAS 903 Query: 197 SSTG 208 +++G Sbjct: 904 AASG 907
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 8.9 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +2 Query: 215 TLSVTKSKPETGEVIGVFESVQPSD 289 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = +2 Query: 71 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 211 G ++ G GG STG N+ + PAGG G ++ ++ + + SSS+GN Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,648,001 Number of Sequences: 219361 Number of extensions: 1229187 Number of successful extensions: 5153 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5140 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
