ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4k11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 678 bits (342), Expect = 0.0 Identities = 475/515 (92%), Gaps = 17/515 (3%) Strand = Plus / Plus Query: 2 gtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgccc 61 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 652 gtcaagcagctcgtcgccaccggcaagcccgagagcttcag---gcccttcctcgtgccc 708 Query: 62 agctacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgac 121 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 agctacaggggttcgtctttcctcgacccaaagggccgtggtggctctactggctacgac 768 Query: 122 aacgcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaac 181 ||||| | ||||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 769 aacgccggtgcgctaccccgcggaggcagaggagacgaggaggagttggccaaggagaac 828 Query: 182 gtgaagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccg 241 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 829 gtgaagaacgcgtcctcctccacgggcaacatcacgctcagcgtcaccaagagcaagccg 888 Query: 242 gagaccggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggc 301 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 889 gagaccggcgaggtgatcggcgtcttcgagagcgtgcagccgtcagacaccgacctcg-- 946 Query: 302 gccaaggcgcccaaggatgtcaagatccagggtgtgtggtacgcgcagctcgagtctaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 ----aggcgcccaaggatgtcaagatccagggtgtgtggtacgcgcagctcgagtctaac 1002 Query: 362 tagagcatagcagaagtgaagatactc--atcttttgtgcatgcatacgtgggttggtcg 419 ||||||| |||||||||||||| || ||||| ||||||||| ||||||||||| ||| Sbjct: 1003 tagagcagagcagaagtgaagaagatcctatcttgtgtgcatgcgtacgtgggttgatcg 1062 Query: 420 gtggagaggaaagaatcgaggcaacaa--tgtgtttgtgtgtgtatctagta---taaaa 474 |||||||||||| |||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 1063 gtggagaggaaacaatcgaggcaacaatgtgtgttggtgtgtgtatctagtaatctaaac 1122 Query: 475 ccagagtgatcggtttatattttagcttctgttat 509 |||| ||| |||||||||||||||||||||||||| Sbjct: 1123 ccagggtg-tcggtttatattttagcttctgttat 1156
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 658 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 717 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 718 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 777 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 778 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 837 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 838 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 897 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 898 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 957 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 958 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1000
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 17346294 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 17346353 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 17346354 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 17346413 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 17346414 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 17346473 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 17346474 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 17346533 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 17346534 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 17346593 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 17346594 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 17346636
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 112555 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 112614 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 112615 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 112674 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 112675 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 112734 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 112735 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 112794 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 112795 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 112854 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 112855 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 112897
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 723 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 782 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 783 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 842 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 843 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 902 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 903 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 962 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 963 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1022 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1023 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1065
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 730 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 789 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 790 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 849 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 850 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 909 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 910 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 969 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 970 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1029 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1030 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1072
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 730 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 789 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 790 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 849 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 850 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 909 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 910 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 969 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 970 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1029 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1030 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1072
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 727 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 786 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 787 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 846 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 847 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 906 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 907 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 966 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 967 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1026 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1027 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1069
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 707 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 766 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 767 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 826 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 827 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 886 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 887 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 946 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 947 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1006 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1007 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1049
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 707 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 766 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 767 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 826 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 827 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 886 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 887 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 946 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 947 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1006 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1007 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1049
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 727 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 786 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 787 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 846 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 847 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 906 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 907 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 966 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 967 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1026 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1027 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1069
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 710 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 769 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 770 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 829 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 830 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 889 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 890 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 949 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 950 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1009 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1010 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1052
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 732 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 791 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 792 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 851 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 852 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 911 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 912 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 971 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 972 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1031 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1032 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1074
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 466 bits (235), Expect = e-128 Identities = 316/343 (92%) Strand = Plus / Plus Query: 14 gtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggt 73 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct: 727 gtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggt 786 Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 || || |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 787 tcgtccttcctcgacccaaagggccgcggtggctctaccggctacgacaacgctgtggcg 846 Query: 134 ctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtgaagaacgcg 193 || |||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 847 ctccccgccggaggcagaggagacgaggaggagctcgctaaggagaacgtcaagaacgcc 906 Query: 194 tcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggagaccggcgag 253 || || || |||||||||||||| | ||||| |||||||||||||| |||||||||||| Sbjct: 907 tcgtcgtcgacgggcaacatcacgttgagcgtcaccaagagcaagccagagaccggcgag 966 Query: 254 gtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgccaaggcgccc 313 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 967 gtgattggcgtcttcgagagcgtgcagccgtcggacacagacctcggcgccaaggtgccc 1026 Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1027 aaggatgtcaagatccaaggggtgtggtacgcgcagctcgagt 1069
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 343 bits (173), Expect = 4e-91 Identities = 307/355 (86%) Strand = Plus / Plus Query: 2 gtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgccc 61 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 968 gtcaagcagctcgtcgccaccggcaagcccgagagcttcggcgggcccttcctcgtgccc 1027 Query: 62 agctacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgac 121 |||||| | || ||||| ||||||||||| |||||||| || ||||| || ||||||||| Sbjct: 1028 agctaccgtggctcctccttcctcgaccccaagggccgcggcggctccaccggctacgac 1087 Query: 122 aacgcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaac 181 ||||| || |||| |||| |||||| |||||||||||||| ||||||||| Sbjct: 1088 aacgccgtcgcgcacgacgccnnnnncagaggtgacgaggaggagctccagaaggagaac 1147 Query: 182 gtgaagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccg 241 | |||||||| |||||||||| ||||||||||| | ||||| ||||||||||| ||| Sbjct: 1148 atcaagaacgccgcctcctccaccggcaacatcacgttgagcgtcaccaagagcaacccg 1207 Query: 242 gagaccggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggc 301 |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1208 gagaccggcgaggtcatcggcgtcttcgagagcgtgcagccgtccgacaccgacctcggg 1267 Query: 302 gccaaggcgcccaaggatgtcaagatccagggtgtgtggtacgcgcagctcgagt 356 ||||||||||||||||||||||||||||| | |||||||| |||||||||| Sbjct: 1268 gccaaggcgcccaaggatgtcaagatccannnnntctggtacgctcagctcgagt 1322
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 5 aagcagctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagc 64 |||||||| || || ||||| ||||||||||||||||||||| | | ||||||||| ||| Sbjct: 673 aagcagctggtggctaccgggaagccggagagcttcagcgggtcgtacctcgtgccgagc 732 Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||| ||||||| || ||||| |||||||||||| | || || ||| | || |||||||| Sbjct: 733 taccggggttcgtcgttccttgacccaaagggcaggggaggatctgccggttacgacaat 792 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagct 168 || ||||| || ||||| ||||| ||||| || ||||||||||| Sbjct: 793 gccgtggcactccccgctggaggtagaggtgatgaggaggagct 836
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 107 bits (54), Expect = 4e-20 Identities = 216/270 (80%) Strand = Plus / Plus Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||||| ||||| || ||||| ||||||||||| || ||||| ||||||||||| |||||| Sbjct: 722 tacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaac 781 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtg 184 || || || |||| || ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 782 gctgttgcattgcctgctggagggagaggagacgaggaggagcttgagaaggagaacgta 841 Query: 185 aagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggag 244 ||||| | | || || || || || |||||||| || || ||| || ||||||| ||| Sbjct: 842 aagaatactgcatcttctacaggaaagatcaccctgagtgttacccagtgcaagccagag 901 Query: 245 accggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgcc 304 ||||| ||||| || || || || |||||| | ||||| || || || || ||||| || Sbjct: 902 accggtgaggtcattggagtatttgagagcatccagccatctgatactgatctcggtgca 961 Query: 305 aaggcgcccaaggatgtcaagatccagggt 334 |||| ||||||||||| || ||||||||| Sbjct: 962 aaggtccccaaggatgtgaaaatccagggt 991
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 107 bits (54), Expect = 4e-20 Identities = 216/270 (80%) Strand = Plus / Plus Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||||| ||||| || ||||| ||||||||||| || ||||| ||||||||||| |||||| Sbjct: 722 tacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaac 781 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtg 184 || || || |||| || ||||| |||||||||||||||||||| ||||||||||| Sbjct: 782 gctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgta 841 Query: 185 aagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggag 244 ||||| | || || || || || || |||||||| || || ||| |||||||||| ||| Sbjct: 842 aagaatacttcatcttctacaggaaagatcaccctgagtgttacccagagcaagccagag 901 Query: 245 accggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgcc 304 ||||| ||||| || || || || |||||| | ||||| || || || || ||||| || Sbjct: 902 accggtgaggtcattggagtatttgagagcatccagccatctgatactgatctcggtgca 961 Query: 305 aaggcgcccaaggatgtcaagatccagggt 334 |||| ||||||||||| || || |||||| Sbjct: 962 aaggttcccaaggatgtgaaaattcagggt 991
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 107 bits (54), Expect = 4e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 120 acaacgcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggaga 179 |||| |||||||| ||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 767 acaatgcggtggcactgcctgcgggaggcagaggagatgaggaggagctcaccaaggaga 826 Query: 180 acgtgaagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagc 239 || | |||||| | || || || || || || |||||||| | || ||||||||||||| Sbjct: 827 acatcaagaacacatcatcgtcaactgggaaaatcaccctgggtgtcaccaagagcaagc 886 Query: 240 cggagaccggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcg 299 | |||||||| ||||| || || || ||||||||| |||| || || ||||| || | | Sbjct: 887 ctgagaccggagaggttattggagtgttcgagagcctgcaaccatctgacactgatttgg 946 Query: 300 gcgccaaggcgcccaaggatgtcaagatccaggg 333 | || |||| || |||||||||||||||||||| Sbjct: 947 gagcaaaggtccctaaggatgtcaagatccaggg 980
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 813 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 872 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 873 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 917 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 951 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 1010 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 1011 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1069
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 472 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 531 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 532 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 576 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 610 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 669 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 670 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 728
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 727 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 786 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 787 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 831 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 865 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 924 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 925 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 983
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 772 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 831 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 832 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 876 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 910 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 969 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 970 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1028
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 727 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 786 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 787 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 831 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 865 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 924 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 925 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 983
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 761 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 820 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 821 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 865 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 899 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 958 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 959 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1017
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 767 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 826 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 827 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 871 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 905 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 964 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 965 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1023
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 761 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 820 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 821 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 865 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 899 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 958 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 959 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1017
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 761 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 820 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 821 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 865 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 899 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 958 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 959 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1017
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 1143 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 1202 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1203 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 1247 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 1281 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 1340 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 1341 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1399
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 752 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 811 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 812 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 890 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 949 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 950 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1008
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 743 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 802 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 803 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 847 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 881 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 940 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| |||| || |||| || |||||||| |||||||| || |||||||| Sbjct: 941 tcggatactgacttcggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 999
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 813 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 872 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 873 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 917 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 951 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 1010 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 1011 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1069
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 58768 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 58827 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 58828 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 58872 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 58906 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 58965 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 58966 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 59024
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 1144 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 1203 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1204 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 1248 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 1282 gtgactaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 1341 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || ||||| ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 1342 tcggacactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1400
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 760 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 819 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 820 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaac 864 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 898 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 957 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 958 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1016
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 103 bits (52), Expect = 6e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 759 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 818 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaa 189 ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 819 ggcagaggagacgaggaggagcttgtaaaggagaacgtgaagaa 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagag 273 ||||| ||||||||||||||||| || |||||||| || || |||||||| Sbjct: 898 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagag 947
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 99.6 bits (50), Expect = 9e-18 Identities = 215/270 (79%) Strand = Plus / Plus Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||||| ||||| || ||||| ||||||||||| || ||||| ||||||||||| |||||| Sbjct: 716 tacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaac 775 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtg 184 || || || |||| || ||||| |||||||| ||||||||||| | ||||||||||| Sbjct: 776 gctgttgcattgcctgctggagggagaggagatgaggaggagcttgagaaggagaacgta 835 Query: 185 aagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggag 244 ||||| | | || || || || || |||||||| || || ||| |||||||||| || Sbjct: 836 aagaatactgcatcttctacaggaaagatcaccctgagtgttacccagagcaagccacag 895 Query: 245 accggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgcc 304 ||||| ||||| || || || || |||||| | ||||| || || || || ||||| || Sbjct: 896 accggtgaggtcattggagtatttgagagcatccagccatctgatactgatctcggtgca 955 Query: 305 aaggcgcccaaggatgtcaagatccagggt 334 |||| ||||||||||| || ||||||||| Sbjct: 956 aaggtccccaaggatgtgaaaatccagggt 985
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||||||||||||||| || || || || |||||||| ||||| |||| || ||| Sbjct: 763 gacccaaagggccgtggtggatccacaggatatgacaacgccgtggcattgccagctgga 822 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 823 ggcagaggagacgaggaggagcttgtaaaggaaaacgtgaagaac 867 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 ||||| ||||||||||||||||| || |||||||| || || |||||||| | |||||| Sbjct: 901 gtgacaaagagcaagccggagacaggagaggtgatcggagtgttcgagagtcttcagccg 960 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || || |||| || |||||||| |||||||| || |||||||| Sbjct: 961 tcggatactgacttgggtgctaaggtaccaaaggatgtgaagatccaaggggtgtggta 1019
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 214/270 (79%) Strand = Plus / Plus Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||||| ||||| || ||||| ||||||||||| || ||||| ||||||||||| |||||| Sbjct: 721 tacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaac 780 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagctggccaaggagaacgtg 184 || || || |||| || ||||| |||||||||||||||||||| ||||||||||| Sbjct: 781 gctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgta 840 Query: 185 aagaacgcgtcctcctccacgggcaacatcaccctcagcgtgaccaagagcaagccggag 244 |||||| | | || | || || || |||||| | || || ||| |||||||||| ||| Sbjct: 841 aagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagag 900 Query: 245 accggcgaggtgataggcgtcttcgagagcgtgcagccgtcagacaccgacctcggcgcc 304 || || ||||| || || || || |||||| | ||||| || || || || || || || Sbjct: 901 actggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggca 960 Query: 305 aaggcgcccaaggatgtcaagatccagggt 334 |||| |||||||||||||| ||||||||| Sbjct: 961 aaggttcccaaggatgtcaaaatccagggt 990
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 839 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 898 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 899 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 943
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 466 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 525 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 526 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 570
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 39917 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 39858 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 39857 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 39813
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 724 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 783 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 784 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 828
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 782 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 841 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 842 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 886
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 730 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 789 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 790 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 834
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 291 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 350 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 351 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 395
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 839 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 898 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 899 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 943
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct: 760 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgcctgccgga 819 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 820 ggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 864
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 83.8 bits (42), Expect = 5e-13 Identities = 53/57 (92%) Strand = Plus / Plus Query: 296 ctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggtacgcgcagctc 352 |||||||| |||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct: 30 ctcggcgcnaaggtgcccaaggatgtcaagatccaaggggtgtggtacgcgcagctc 86
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || || || || |||||||| || || |||| || ||| Sbjct: 791 gacccaaagggtcgtggtggatccacaggatatgacaacgccgttgcattgccagctgga 850 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 |||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 851 ggcagaggagacgaagaggagctttcgaaggagaacgtgaagaac 895 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 |||||||||||||| |||||||| || || ||||| || || ||| |||| | |||||| Sbjct: 929 gtgaccaagagcaaaccggagacaggagaagtgatcggagtgttccagagtcttcagccg 988 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || ||||||| || |||||||| |||||||| || |||||||| Sbjct: 989 tctgatactgacttgggtgccaaggtaccaaaggatgtgaagatccaaggggtgtggta 1047
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 75.8 bits (38), Expect = 1e-10 Identities = 90/106 (84%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgccc-gccgg 144 ||||||||||| |||||||| || ||||| ||||| || || ||||| || || ||||| Sbjct: 745 gacccaaagggtcgtggtggatccactgggtacgataatgcagtggctttgacctgccgg 804 Query: 145 aggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 |||||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct: 805 aggcagaggagacgaggaagagctatccaaggaaaacgtcaagaac 850
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 ||||||||||| |||||||| || | || || |||||||| || || |||| || ||| Sbjct: 782 gacccaaagggtcgtggtggatcctcaggatatgacaacgccgttgcattgccagctgga 841 Query: 146 ggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 |||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 842 ggcagaggagacgaagaggagctttcgaaggagaacgtgaagaac 886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 224 gtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcagccg 283 |||||||||||||| |||||||| || || ||||| || || |||||||| | || ||| Sbjct: 920 gtgaccaagagcaaaccggagacaggagaagtgatcggagtgttcgagagtcttcacccg 979 Query: 284 tcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtggta 342 || || || ||| | || ||||||| || |||||||| |||||||| || |||||||| Sbjct: 980 tcggatactgacttgggtgccaaggtaccaaaggatgtgaagatccaaggggtgtggta 1038
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 221 agcgtgaccaagagcaagccggagaccggcgaggtgataggcgtcttcgagagcgtgcag 280 |||||||| |||||||||| || ||||| |||||||| || || ||||||||| | ||| Sbjct: 66700 agcgtgacacagagcaagcctgataccggtgaggtgattggtgtgttcgagagcattcag 66641 Query: 281 ccgtcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatccagggtgtgtgg 340 ||||| ||||| || | || || || || || |||||||| ||||||||||| || ||| Sbjct: 66640 ccgtccgacactgatttgggagcgaaagctccaaaggatgtgaagatccagggagtttgg 66581 Query: 341 tacgcgcagctcgagtc 357 || || ||||||||||| Sbjct: 66580 tatgctcagctcgagtc 66564 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 314 aaggatgtcaagatccagggtgtgtggtacgcgcagctcgagtc 357 |||||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 55704 aaggatgtgaagatccagggagtttggtatgctcagcttgagtc 55661
>emb|X05548.1|SOPS33 Spinach mRNA for 33kDA precursor protein (associated with photosynthetic water oxidation complex) Length = 1153 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 74 tcctctttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcg 133 ||||| ||||| |||||||||||||| ||||| || || || || |||||||| || ||| Sbjct: 758 tcctcgttccttgacccaaagggccgaggtgggtccaccgggtatgacaacgctgttgcg 817 Query: 134 ctgcccgccggaggcagaggagacgaggagga 165 |||| ||||| || ||||||||||||||||| Sbjct: 818 ttgcctgccggtgggagaggagacgaggagga 849
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 80 ttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgccc 139 ||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| |||||| Sbjct: 625 ttcctggaccccaagggccgcggtggctcgaccggctacgacaacgccgtggctctgccc 684 Query: 140 gcc 142 ||| Sbjct: 685 gcc 687 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 278 cagccgtcagacaccgacctcggcgccaaggcgcccaagga 318 ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct: 817 cagccctcggacactgacctgggcgccaaggcccccaagga 857
>emb|X13826.1|CROEE1 C.reinhardtii psb1 mRNA for OEE1 protein of photosystem II (oxygen-evolving enhancer protein) Length = 1714 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 80 ttcctcgacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgccc 139 ||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| |||||| Sbjct: 757 ttcctggaccccaagggccgcggtggctcgaccggctacgacaacgccgtggctctgccc 816 Query: 140 gcc 142 ||| Sbjct: 817 gcc 819
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 26 aagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctctttcctc 85 ||||| ||||||||||| || |||||| ||||| |||||| ||||| || || || Sbjct: 700 aagcctgagagcttcagtggcgacttccttgtgccatcctacagaggttcatcgtttctt 759 Query: 86 gacccaaagggccgtggtggctctactggctacgacaacgcggtggcgctgcccgccgga 145 |||||||| ||| | ||||| || ||||| |||||||| || || || |||| || ||| Sbjct: 760 gacccaaaaggcaggggtggatccactggttacgacaatgctgttgcattgccagctgga 819 Query: 146 ggcagaggagacgaggaggagct 168 ||||||||||| ||||||||||| Sbjct: 820 ggcagaggagatgaggaggagct 842
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 145 aggcagaggagacgaggaggagctggccaaggagaacgtgaagaac 190 ||||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 791 aggcagaggagacgaagaggagctctcaaaggagaacgtgaagaac 836
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 65 tacaggggttcctctttcctcgacccaaagggccgtggtggctctactggctacgacaac 124 ||||| ||||| || || || |||||||||||| | ||||| || ||||| || ||||| Sbjct: 703 tacagaggttcatcatttcttgacccaaagggcaggggtggatccactggttatgacaat 762 Query: 125 gcggtggcgctgcccgccggaggcagaggagacgaggaggagct 168 || || || |||| || |||||||||||||| ||||||||||| Sbjct: 763 gctgttgcattgccagctggaggcagaggagatgaggaggagct 806
>gb|AF110780.1|AF110780 Volvox carteri f. nagariensis clone G14 oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 80 ttcctcgacccaaagggccgtggtggctctactggctacgacaacgc 126 ||||| ||||| |||||||| |||||||| || |||||||||||||| Sbjct: 663 ttcctggaccccaagggccgcggtggctcgaccggctacgacaacgc 709
>ref|XM_483762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 509 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 181 cgaggaggagcgggccaaggagaacgt 207
>ref|XM_507334.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.11 mRNA Length = 561 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 227 cgaggaggagcgggccaaggagaacgt 253
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 278 cagccgtcagacaccgacctcggcgccaaggcgcccaaggatgtcaagatc 328 ||||| || ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 439 cagccctctgacacagacctggggtccaaggcccccaaggatgtcaagatc 489
>ref|XM_505779.1| Yarrowia lipolytica CLIB122, YALI0F23221g predicted mRNA Length = 1518 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 gaggaggagctggccaaggagaa 180 ||||||||||||||||||||||| Sbjct: 1486 gaggaggagctggccaaggagaa 1508
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 27959180 cgaggaggagcgggccaaggagaacgt 27959206
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 36672 cgaggaggagcgggccaaggagaacgt 36698
>dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 181 cgaggaggagcgggccaaggagaacgt 207
>dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 227 cgaggaggagcgggccaaggagaacgt 253
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 158 gaggaggagctggccaaggagaa 180 ||||||||||||||||||||||| Sbjct: 3045262 gaggaggagctggccaaggagaa 3045240 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggaggagctggccaaggag 178 |||||||||||||||||||| Sbjct: 1792307 aggaggagctggccaaggag 1792326
>dbj|AB029059.1| Oryza sativa (japonica cultivar-group) OsIF1-1 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 498 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 cgaggaggagctggccaaggagaacgt 183 ||||||||||| ||||||||||||||| Sbjct: 139 cgaggaggagcgggccaaggagaacgt 165
>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence Length = 157307 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 aatgtgtttgtgtgtgtatcta 466 |||||||||||||||||||||| Sbjct: 90679 aatgtgtttgtgtgtgtatcta 90658
>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence Length = 210003 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 aatgtgtttgtgtgtgtatcta 466 |||||||||||||||||||||| Sbjct: 171902 aatgtgtttgtgtgtgtatcta 171881
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 tgcccagctacaggggttcctc 78 |||||||||||||||||||||| Sbjct: 169536 tgcccagctacaggggttcctc 169515
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 335 gtgtggtacgcgcagctcgagt 356 |||||||||||||||||||||| Sbjct: 7 gtgtggtacgcgcagctcgagt 28
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 tgcccagctacaggggttcctc 78 |||||||||||||||||||||| Sbjct: 41472 tgcccagctacaggggttcctc 41451
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtata 471 ||||| ||||||||||||||||||| Sbjct: 99417 tgtgtgtgtgtgtgtatctagtata 99393
>ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 55 cggaggcggaggagacgaggaggag 31
>gb|BT016549.1| Zea mays clone Contig382 mRNA sequence Length = 713 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gacgaggaggagctggccaag 175 ||||||||||||||||||||| Sbjct: 119 gacgaggaggagctggccaag 99
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 439 ggcaacaatgtgtttgtgtgtgtat 463 ||||||||||||| ||||||||||| Sbjct: 66975 ggcaacaatgtgtatgtgtgtgtat 66999
>gb|AY071483.1| Drosophila melanogaster RE55321 full insert cDNA Length = 952 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 111 aaggatgtcaagatccagggt 131
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 caacaatgtgtttgtgtgtgt 461 ||||||||||||||||||||| Sbjct: 125325 caacaatgtgtttgtgtgtgt 125345
>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence Length = 252659 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 acaatgtgtttgtgtgtgtat 463 ||||||||||||||||||||| Sbjct: 110173 acaatgtgtttgtgtgtgtat 110153
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 gaggaggagctggccaaggag 178 ||||||||||||||||||||| Sbjct: 28362 gaggaggagctggccaaggag 28382
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 caacaatgtgtttgtgtgtgt 461 ||||||||||||||||||||| Sbjct: 38899 caacaatgtgtttgtgtgtgt 38879
>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14, complete sequence Length = 97391 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 gtttatattttagcttctgtt 507 ||||||||||||||||||||| Sbjct: 73752 gtttatattttagcttctgtt 73732
>gb|AC102677.9| Mus musculus chromosome 5, clone RP24-67M11, complete sequence Length = 167898 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatcta 466 ||||||||||||||||||||| Sbjct: 108222 atgtgtttgtgtgtgtatcta 108202
>ref|NM_143543.2| Drosophila melanogaster Jonah 99Fi CG18030-RA (Jon99Fi), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 111 aaggatgtcaagatccagggt 131
>ref|NM_143542.1| Drosophila melanogaster Jonah 99Fii CG2229-RA (Jon99Fii), mRNA Length = 914 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 111 aaggatgtcaagatccagggt 131
>gb|AY070585.1| Drosophila melanogaster RE68767 full length cDNA Length = 937 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 112 aaggatgtcaagatccagggt 132
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 3812 aaggatgtcaagatccagggt 3832
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 caacaatgtgtttgtgtgtgt 461 ||||||||||||||||||||| Sbjct: 35617 caacaatgtgtttgtgtgtgt 35597
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 26088299 cggaggcggaggagacgaggaggag 26088275
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 59844 aaggatgtcaagatccagggt 59864 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 58585 aaggatgtcaagatccagggt 58565
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatcta 466 ||||||||||||||||||||| Sbjct: 1834 atgtgtttgtgtgtgtatcta 1814
>dbj|AK103369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P16, full insert sequence Length = 816 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 88 cggaggcggaggagacgaggaggag 64
>dbj|AK102934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114I03, full insert sequence Length = 1488 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 113 cggaggcggaggagacgaggaggag 89
>dbj|AK061536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F08, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 89 cggaggcggaggagacgaggaggag 65
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatcta 466 ||||||||||||||||||||| Sbjct: 123360 atgtgtttgtgtgtgtatcta 123340
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 57427 aaggatgtcaagatccagggt 57447 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 aaggatgtcaagatccagggt 334 ||||||||||||||||||||| Sbjct: 56168 aaggatgtcaagatccagggt 56148
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cggaggcagaggagacgaggaggag 166 ||||||| ||||||||||||||||| Sbjct: 122626 cggaggcggaggagacgaggaggag 122602
>gb|AC102467.6| Mus musculus chromosome 1, clone RP24-348G21, complete sequence Length = 167344 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatcta 466 ||||||||||||||||||||| Sbjct: 126886 atgtgtttgtgtgtgtatcta 126906
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 437 gaggcaacaatgtgtttgtgtgtgt 461 ||||||||||||||| ||||||||| Sbjct: 84937 gaggcaacaatgtgtgtgtgtgtgt 84913
>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163784 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 aatgtgtttgtgtgtgtatct 465 ||||||||||||||||||||| Sbjct: 120288 aatgtgtttgtgtgtgtatct 120308
>ref|XM_514032.1| PREDICTED: Pan troglodytes LOC457555 (LOC457555), mRNA Length = 4122 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cagaggagacgaggaggagctggc 171 ||||||| |||||||||||||||| Sbjct: 14 cagaggaaacgaggaggagctggc 37
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 gcagaggagacgaggaggagctgg 170 ||||| |||||||||||||||||| Sbjct: 85177 gcagatgagacgaggaggagctgg 85200
>ref|XM_875064.1| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 2 (LOC520966), mRNA Length = 1403 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 117 ggaggagctggccaaggaga 136
>ref|XM_599218.2| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 1 (LOC520966), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 117 ggaggagctggccaaggaga 136
>ref|XM_418941.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20330 (LOC420852), mRNA Length = 554 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 127 ggaggagctggccaaggaga 146
>ref|XM_959978.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 138 ggcaacatcaccctcagcgt 119
>ref|XM_960181.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggaggcagaggagacgaggaggag 166 |||||||||||||| ||||||||| Sbjct: 1790 ggaggcagaggagaggaggaggag 1767
>ref|XM_329416.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggaggcagaggagacgaggaggag 166 |||||||||||||| ||||||||| Sbjct: 1790 ggaggcagaggagaggaggaggag 1767
>ref|XM_331675.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 138 ggcaacatcaccctcagcgt 119
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctcgtcgccaccggcaagcc 30 |||||||||||||||||||| Sbjct: 1368439 ctcgtcgccaccggcaagcc 1368458
>ref|NM_018988.1| Homo sapiens glucose-fructose oxidoreductase domain containing 1 (GFOD1), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 782 ggaggagctggccaaggaga 801
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 31571 atgtgtttgtgtgtgtatct 31552
>gb|AY491540.1| Nicotiana tabacum voucher Et12 ERT12 (ert12) mRNA, partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 50 ttcctcgtgcccagctacaggggttcctctttcctcgacccaaagggccgtggtgg 105 |||||||||||| ||||| ||||| || ||||| ||||||||||| || ||||| Sbjct: 94 ttcctcgtgccctcatacagaggttcgtcgttccttgacccaaagggacgaggtgg 149
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 ggaggcagaggagacgaggaggag 166 |||||||||||||| ||||||||| Sbjct: 56115 ggaggcagaggagaggaggaggag 56138
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 50836 atgtgtttgtgtgtgtatct 50855
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 29779 tgtgtttgtgtgtgtatcta 29760
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 acgcggtggcgctgcccgccggag 146 ||||| |||||||||||||||||| Sbjct: 2163672 acgcgctggcgctgcccgccggag 2163695
>ref|XM_802280.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511685.40) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gtcctcctccacgggcaaca 212 |||||||||||||||||||| Sbjct: 465 gtcctcctccacgggcaaca 446
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggaggcagaggagacgaggaggag 166 ||||| |||||||||||||||||| Sbjct: 189919 ggaggaagaggagacgaggaggag 189896
>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence Length = 165934 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtat 470 ||||||||||||||| |||||||| Sbjct: 143583 tgtgtttgtgtgtgtgtctagtat 143560
>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence Length = 184128 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtataaaa 474 ||||| ||||||||||||||| |||||| Sbjct: 110753 tgtgtgtgtgtgtgtatctagaataaaa 110726
>ref|XM_815950.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508741.90) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gtcctcctccacgggcaaca 212 |||||||||||||||||||| Sbjct: 465 gtcctcctccacgggcaaca 446
>gb|AC092089.2| Danio rerio clone 85I7, complete sequence Length = 62442 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 aacaatgtgtttgtgtgtgt 461 |||||||||||||||||||| Sbjct: 7780 aacaatgtgtttgtgtgtgt 7761
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 110556 atgtgtttgtgtgtgtatct 110575
>gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, complete sequence Length = 190130 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 128114 tgtgtttgtgtgtgtatcta 128133 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 127976 tgtgtttgtgtgtgtatcta 127995
>ref|XM_763044.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_64_29090_28800) partial mRNA Length = 291 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 139 cgccggaggcagaggagacgaggaggag 166 ||||| ||||||||| |||||||||||| Sbjct: 110 cgccgaaggcagaggcgacgaggaggag 83
>ref|XM_764745.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_217_21978_22328) partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 139 cgccggaggcagaggagacgaggaggag 166 ||||| ||||||||| |||||||||||| Sbjct: 40 cgccgaaggcagaggcgacgaggaggag 13
>ref|XM_763043.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_64_29074_28670) partial mRNA Length = 405 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 139 cgccggaggcagaggagacgaggaggag 166 ||||| ||||||||| |||||||||||| Sbjct: 94 cgccgaaggcagaggcgacgaggaggag 67
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtataaaa 474 ||||| ||||||||||||||| |||||| Sbjct: 209960 tgtgtgtgtgtgtgtatctagaataaaa 209933
>emb|AL731544.11| Human DNA sequence from clone RP11-514F8 on chromosome 10 Contains the 3' end of the gene for a novel SH2 domain-containing protein, a novel gene and a CpG island, complete sequence Length = 98873 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 89101 atgtgtttgtgtgtgtatct 89120
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 taactagagcatagcagaagtgaagata 385 ||||||||||| |||||||||| ||||| Sbjct: 137635 taactagagcacagcagaagtgcagata 137608
>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5' end of the SLICK gene for a sodium- and chloride-activated ATP-sensitive potassium channel, complete sequence Length = 185560 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 63227 tgtgtttgtgtgtgtatcta 63208
>emb|AL589844.4| Human DNA sequence from clone RP11-436F21 on chromosome 9 Contains the 3' end of a novel gene and 5'end of a novel gene, complete sequence Length = 157982 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 62265 tgtgtttgtgtgtgtatcta 62246
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 42464 ggaggagctggccaaggaga 42445
>ref|XM_505369.1| Yarrowia lipolytica CLIB122, YALI0F13343g predicted mRNA Length = 6255 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggaggagctggccaaggag 178 |||||||||||||||||||| Sbjct: 3518 aggaggagctggccaaggag 3537
>emb|AL353708.10| Human DNA sequence from clone RP11-533E19 on chromosome 1 Contains the 5' ends of two novel genes, two novel genes and a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene, complete sequence Length = 90125 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cagaggagacgaggaggagctggc 171 ||||||| |||||||||||||||| Sbjct: 72914 cagaggaaacgaggaggagctggc 72937
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 acgcggtggcgctgcccgccggag 146 ||||| |||||||||||||||||| Sbjct: 2160036 acgcgctggcgctgcccgccggag 2160059
>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tttatattttagcttctgtt 507 |||||||||||||||||||| Sbjct: 79462 tttatattttagcttctgtt 79443
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 90438 ggcaacatcaccctcagcgt 90457
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctcgtcgccaccggcaagcc 30 |||||||||||||||||||| Sbjct: 2685856 ctcgtcgccaccggcaagcc 2685875
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gaacgcgtcctcctccacgg 206 |||||||||||||||||||| Sbjct: 76769 gaacgcgtcctcctccacgg 76750
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgcggtggcgctgcccgccg 143 |||||||||||||||||||| Sbjct: 100510 cgcggtggcgctgcccgccg 100491
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cgacaacgcggtggcgctgcccgc 141 ||||||||||||| |||||||||| Sbjct: 40782 cgacaacgcggtgccgctgcccgc 40759
>gb|AC108484.25| Mus musculus strain 129/Sv clone ct7-293m19 map 19, complete sequence Length = 170321 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 39161 tgtgtttgtgtgtgtatcta 39142
>emb|AJ784854.1| Cyanophora paradoxa mRNA for oxygen-evolving enhancer protein 1 (psbO gene) Length = 1338 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 aggaggagctggccaaggagaacg 182 ||||||||||||| |||||||||| Sbjct: 837 aggaggagctggctaaggagaacg 860 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ttcctcgacccaaagggccgtggt 103 ||||||||||| |||||||||||| Sbjct: 767 ttcctcgacccgaagggccgtggt 790
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 caacaatgtgtttgtgtgtg 460 |||||||||||||||||||| Sbjct: 160408 caacaatgtgtttgtgtgtg 160427
>emb|BX005114.6| Mouse DNA sequence from clone RP24-199F23 on chromosome 11 no genes, complete sequence Length = 135695 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 39606 tgtgtttgtgtgtgtatcta 39625
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cctccacgggcaacatcaccctca 221 ||||||||||| |||||||||||| Sbjct: 3055731 cctccacgggcgacatcaccctca 3055754
>gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 34531 tgtgtttgtgtgtgtatcta 34550 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 34286 tgtgtttgtgtgtgtatcta 34305
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ccaaggatgtcaagatccag 331 |||||||||||||||||||| Sbjct: 19288 ccaaggatgtcaagatccag 19307
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ccaaggatgtcaagatccag 331 |||||||||||||||||||| Sbjct: 36751 ccaaggatgtcaagatccag 36770
>gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, complete sequence Length = 191309 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 173828 tgtgtttgtgtgtgtatcta 173809
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 acgcggtggcgctgcccgccggag 146 ||||| |||||||||||||||||| Sbjct: 4040690 acgcgctggcgctgcccgccggag 4040713
>gb|AY860592.1| Physcia aipolia isolate 8Aa 26S ribosomal RNA gene, partial sequence Length = 1314 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcctccacgggcaacatcac 216 |||||||||||||||||||| Sbjct: 527 tcctccacgggcaacatcac 546
>gb|AY860591.1| Physcia aipolia isolate 2Ab 26S ribosomal RNA gene, partial sequence Length = 1437 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcctccacgggcaacatcac 216 |||||||||||||||||||| Sbjct: 567 tcctccacgggcaacatcac 586
>gb|AY860590.1| Physcia aipolia isolate 6Ah 26S ribosomal RNA gene, partial sequence Length = 1321 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcctccacgggcaacatcac 216 |||||||||||||||||||| Sbjct: 535 tcctccacgggcaacatcac 554
>emb|CR386366.1| Gallus gallus finished cDNA, clone ChEST938k13 Length = 558 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 130 ggaggagctggccaaggaga 149
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 gcagaggagacgaggaggagctgg 170 ||||| |||||||||||||||||| Sbjct: 14356391 gcagatgagacgaggaggagctgg 14356414
>gb|AF164624.1|AF164624 Giardia intestinalis protein disulfide isomerase 5 (PDI-5) gene, complete cds Length = 540 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 139 cgccggaggcagaggagacgaggaggag 166 ||||| ||||||||| |||||||||||| Sbjct: 154 cgccgaaggcagaggcgacgaggaggag 127
>gb|AY773914.1| Physcia aipolia 26S large subunit ribosomal RNA gene, partial sequence Length = 1436 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcctccacgggcaacatcac 216 |||||||||||||||||||| Sbjct: 566 tcctccacgggcaacatcac 585
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 71600 atgtgtttgtgtgtgtatct 71581
>gb|AC006375.4| Homo sapiens BAC clone RP11-362A15 from 2, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtat 470 ||||||||||||||||| |||||| Sbjct: 5639 tgtgtttgtgtgtgtatgtagtat 5616
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 agaggaaagaatcgaggcaa 443 |||||||||||||||||||| Sbjct: 120448 agaggaaagaatcgaggcaa 120467
>gb|AC092620.2| Homo sapiens BAC clone RP11-231E19 from 2, complete sequence Length = 151037 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 28038 atgtgtttgtgtgtgtatct 28057
>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 61547 tgtgtttgtgtgtgtatcta 61566
>gb|AF164117.1|AF164117 Giardia intestinalis protein disulfide isomerase 3 gene, complete cds Length = 550 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 139 cgccggaggcagaggagacgaggaggag 166 ||||| ||||||||| |||||||||||| Sbjct: 154 cgccgaaggcagaggcgacgaggaggag 127
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 80053 ggaggagctggccaaggaga 80072
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ccgacctcggcgccaaggcg 310 |||||||||||||||||||| Sbjct: 3379480 ccgacctcggcgccaaggcg 3379461 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gcggtggcgctgcccgccgg 144 |||||||||||||||||||| Sbjct: 2309940 gcggtggcgctgcccgccgg 2309959
>gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the complete genome Length = 18209 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 acgcggtggcgctgcccgccggag 146 ||||| |||||||||||||||||| Sbjct: 9187 acgcgctggcgctgcccgccggag 9164
>gb|L27063.1|STMDNAGYR Streptomyces coelicolor dnaA-gyrA region Length = 8200 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cgacaacgcggtggcgctgcccgc 141 ||||||||||||| |||||||||| Sbjct: 1017 cgacaacgcggtgccgctgcccgc 1040
>dbj|AK000337.1| Homo sapiens cDNA FLJ20330 fis, clone HEP10296 Length = 3033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 782 ggaggagctggccaaggaga 801
>ref|XM_556986.1| Anopheles gambiae str. PEST ENSANGP00000026473 (ENSANGG00000023329), partial mRNA Length = 564 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 acgaggaggagctggccaag 175 |||||||||||||||||||| Sbjct: 365 acgaggaggagctggccaag 384
>dbj|AK111406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E08, full insert sequence Length = 1428 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 gcagaggagacgaggaggagctgg 170 ||||| |||||||||||||||||| Sbjct: 977 gcagatgagacgaggaggagctgg 954
>emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in linkage group 12, complete sequence Length = 135174 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 caatgtgtttgtgtgtgtatctag 467 |||||||| ||||||||||||||| Sbjct: 23453 caatgtgtatgtgtgtgtatctag 23476
>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence Length = 224420 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 149758 atgtgtttgtgtgtgtatct 149739
>emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in linkage group 4, complete sequence Length = 158481 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tttatattttagcttctgtt 507 |||||||||||||||||||| Sbjct: 41271 tttatattttagcttctgtt 41290
>gb|AF147744.1|AF147744 Staphylococcus aureus strain C55 lantibiotic structural protein alpha, lantibiotic structural protein beta, lantibiotic modifying enzyme, and transporter genes, complete cds Length = 6276 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ttatattttagcttctgtta 508 |||||||||||||||||||| Sbjct: 187 ttatattttagcttctgtta 168
>emb|AL117672.5|CNS01DRN Human chromosome 14 DNA sequence BAC R-142C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179902 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 448 gtgtttgtgtgtgtatctagtataaaac 475 |||||||||| ||| ||||||||||||| Sbjct: 77311 gtgtttgtgtttgtgtctagtataaaac 77284
>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167127 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 144496 tgtgtttgtgtgtgtatcta 144515
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 caatgtgtttgtgtgtgtat 463 |||||||||||||||||||| Sbjct: 63909 caatgtgtttgtgtgtgtat 63890
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 577040 ggaggagctggccaaggaga 577059
>emb|AL929241.13| Mouse DNA sequence from clone RP23-4L24 on chromosome 2, complete sequence Length = 168308 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gagcttcagcgggcccttcc 53 |||||||||||||||||||| Sbjct: 79825 gagcttcagcgggcccttcc 79806
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gctacgacaacgcggtggcg 133 |||||||||||||||||||| Sbjct: 1389893 gctacgacaacgcggtggcg 1389912
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatctagtat 470 ||||||||||||||| |||||||| Sbjct: 172599 tgtgtttgtgtgtgtgtctagtat 172576
>emb|AL954861.11| Zebrafish DNA sequence from clone CH211-8I17, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 85823 tgtgtttgtgtgtgtatcta 85842
>emb|CT009600.12| Mouse DNA sequence from clone RP23-76M10 on chromosome 14, complete sequence Length = 217257 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatctagtat 470 ||||||||||||||| |||||||| Sbjct: 187196 tgtgtttgtgtgtgtgtctagtat 187219
>gb|AF071792.1|AF071792 Micromonospora olivasterospora RNA polymerase sigma-like factor gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 153 ggaggagctggccaaggaga 172
>gb|AF071791.1|AF071791 Micromonospora purpurea RNA polymerase sigma-like factor gene, partial cds Length = 483 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaggagctggccaaggaga 179 |||||||||||||||||||| Sbjct: 153 ggaggagctggccaaggaga 172
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 atgtgtttgtgtgtgtatct 465 |||||||||||||||||||| Sbjct: 128790 atgtgtttgtgtgtgtatct 128809
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 2501 ggcaacatcaccctcagcgt 2482
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 38739 tgtgtttgtgtgtgtatcta 38720
>gb|AC150685.2| Mus musculus BAC clone RP23-239C12 from 19, complete sequence Length = 194627 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 24666 tgtgtttgtgtgtgtatcta 24685
>gb|U90120.1|FSU90120 Flavobacterium sp. isoamylase (iam) gene, complete cds Length = 2936 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 caacgcggtggcgctgcccg 140 |||||||||||||||||||| Sbjct: 2553 caacgcggtggcgctgcccg 2572
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cgtcgccaccggcaagccgg 32 |||||||||||||||||||| Sbjct: 3301339 cgtcgccaccggcaagccgg 3301358
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 2501 ggcaacatcaccctcagcgt 2482
>emb|AL137818.4|CNS01DWP Human chromosome 14 DNA sequence BAC R-102C24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179714 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tgtgtttgtgtgtgtatcta 466 |||||||||||||||||||| Sbjct: 4852 tgtgtttgtgtgtgtatcta 4871
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggcaacatcaccctcagcgt 225 |||||||||||||||||||| Sbjct: 2482 ggcaacatcaccctcagcgt 2463
>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence Length = 38211 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ttatattttagcttctgtta 508 |||||||||||||||||||| Sbjct: 24389 ttatattttagcttctgtta 24370 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,494,444 Number of Sequences: 3902068 Number of extensions: 5494444 Number of successful extensions: 211431 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 209992 Number of HSP's gapped (non-prelim): 1429 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
