ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA21_MOUSE (Q9JI76) ADAM 21 precursor (EC 3.4.24.-) (A disinteg... 28 6.2
2K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin,... 28 6.2
3SYL_PARUW (Q6MCC8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 28 8.1

>ADA21_MOUSE (Q9JI76) ADAM 21 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 21) (ADAM 31)
          Length = 729

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 229 FRGAFYKDGMAPALMQVRCVHKGPRSGCGYMV 134
           F    Y D M   L Q  C++  PR G G++V
Sbjct: 379 FTNCSYSDFMKTTLNQGTCLYNHPRPGAGFLV 410



to top

>K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin, type I Ha8)|
          Length = 456

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 70  IDRRSCMHRACIIVSYRSTTIIPCNRNLIEGLYVRT*PASEQVPCHPCKTPP 225
           ++R++  ++  + V  R    I   RNL+E           ++PC+PC TPP
Sbjct: 380 LERQNQEYQVLLDVKTRLENEIATYRNLLES-------EDCKLPCNPCSTPP 424



to top

>SYL_PARUW (Q6MCC8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 845

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 206 WHGTCSDAGQVRT*RPSIRLRLHGMIVVDRYDTMM 102
           WH    D G V T  P   LR  G++V   Y   M
Sbjct: 558 WHKVLYDCGYVHTLEPFQTLRNQGLVVARSYQNKM 592


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,328,825
Number of Sequences: 219361
Number of extensions: 480418
Number of successful extensions: 1898
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top