ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107801.1| Zea mays PCO105307 mRNA sequence 200 3e-48
2ref|XM_450481.1| Oryza sativa (japonica cultivar-group), mRNA 192 7e-46
3dbj|AK067071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 7e-46
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
5dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
6dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
7ref|XM_470983.1| Oryza sativa (japonica cultivar-group), predic... 44 0.39
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
9emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 44 0.39
10emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 44 0.39
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
12gb|AC012618.7| Homo sapiens chromosome 19 clone CTD-2666L21, com... 42 1.5
13gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, com... 42 1.5
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds 42 1.5
16gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
17gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ... 42 1.5
18ref|XM_480789.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
19ref|NM_195629.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.0
20gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.0
22gb|AY657495.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.0
23gb|AY317504.1| Mus musculus olfactory receptor Olfr401 (Olfr401)... 40 6.0
24gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121... 40 6.0
25emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 6.0
26emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chr... 40 6.0
27gb|AY073389.1| Mus musculus olfactory receptor MOR255-6 gene, co... 40 6.0
28gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare st... 40 6.0
29dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
31gb|AE004500.1| Pseudomonas aeruginosa PAO1, section 61 of 529 of... 40 6.0
32dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.0
33dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34ref|NM_146706.1| Mus musculus olfactory receptor 401 (Olfr401), ... 40 6.0
35gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
37gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.0 
>gb|AY107801.1| Zea mays PCO105307 mRNA sequence
          Length = 1115

 Score =  200 bits (101), Expect = 3e-48
 Identities = 248/297 (83%)
 Strand = Plus / Plus

                                                                       
Query: 152 ggaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacac 211
           |||||||||||||||||||| ||||||||||||| |||| ||||  |||||||| |||||
Sbjct: 235 ggaggtgagcttcgtggacgccgacgaggcgaagaggctcgtgggcgaggagggctacac 294

                                                                       
Query: 212 ggtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgccca 271
           |||||||||| || ||||| ||  ||||  ||||||||| ||| ||| | ||||| | ||
Sbjct: 295 ggtgctggacatcagggacagggcgcagcgcgagagggcacacatcaagtcctccacaca 354

                                                                       
Query: 272 cgtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagc 331
           ||| || |||| ||| |||||| | |||||||||||||| || ||| | ||||| ||   
Sbjct: 355 cgtgcctctcttcattgagaaccaagacaacgacattgggaccatcgtgaagcgccagct 414

                                                                       
Query: 332 gcacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggactt 391
           ||||||||||||||| || ||||||| ||| ||| |||||||||||||||||| ||||||
Sbjct: 415 gcacaacaacttcgcggggctcttcttcgggctgcccttcaccaagctcaacccggactt 474

                                                                    
Query: 392 caccaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctgcca 448
           | ||  ||| || | |  ||||||||||||||| |||||||||||||| ||||||||
Sbjct: 475 cgccctgacagtcaaggacaagttctcgccggaaagcaagctgctggttgtctgcca 531
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>ref|XM_450481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1155

 Score =  192 bits (97), Expect = 7e-46
 Identities = 244/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 153 gaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 212
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 329

                                                                       
Query: 213 gtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgcccac 272
           ||||||||| |||||||||||  ||||  ||||||||||||| ||| |  ||| || || 
Sbjct: 330 gtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcat 389

                                                                       
Query: 273 gtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagcg 332
           || || |||| | |||||||||| |||  |||||||||||| || || |||||    |  
Sbjct: 390 gtgcccctcttcgtcgagaacgacgacggcgacattggaactattataaagcgcacggta 449

                                                                       
Query: 333 cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 392
           |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 450 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 509

                                                                
Query: 393 accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctg 445
           ||||||| ||| | |   ||||||||||||||||||||||||||||| |||||
Sbjct: 510 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctg 562



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 7   aaatggcagttcttggtctatctactgccttctctcccccaagaggttcttggatagctg 66
           |||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||
Sbjct: 121 aaatggcagttcttggtctatccactgccttctctcctcccagaggttcttgtatagctg 180

                              
Query: 67  tgaggctcaggaatggcgc 85
           ||||| ||||| |||||||
Sbjct: 181 tgaggatcaggcatggcgc 199
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>dbj|AK067071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I09, full
           insert sequence
          Length = 1156

 Score =  192 bits (97), Expect = 7e-46
 Identities = 244/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 153 gaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 212
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 330

                                                                       
Query: 213 gtgctggacgtccgggaccggcggcagtacgagagggcgcacgtcagggcctccgcccac 272
           ||||||||| |||||||||||  ||||  ||||||||||||| ||| |  ||| || || 
Sbjct: 331 gtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcat 390

                                                                       
Query: 273 gtcccgctctacatcgagaacgaggacaacgacattggaacgatcatcaagcggcaagcg 332
           || || |||| | |||||||||| |||  |||||||||||| || || |||||    |  
Sbjct: 391 gtgcccctcttcgtcgagaacgacgacggcgacattggaactattataaagcgcacggta 450

                                                                       
Query: 333 cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 392
           |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 451 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 510

                                                                
Query: 393 accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctg 445
           ||||||| ||| | |   ||||||||||||||||||||||||||||| |||||
Sbjct: 511 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctg 563



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 7   aaatggcagttcttggtctatctactgccttctctcccccaagaggttcttggatagctg 66
           |||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||
Sbjct: 122 aaatggcagttcttggtctatccactgccttctctcctcccagaggttcttgtatagctg 181

                              
Query: 67  tgaggctcaggaatggcgc 85
           ||||| ||||| |||||||
Sbjct: 182 tgaggatcaggcatggcgc 200
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  155 bits (78), Expect = 1e-34
 Identities = 96/102 (94%)
 Strand = Plus / Plus

                                                                           
Query: 153     gaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 212
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5812739 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 5812798

                                                         
Query: 213     gtgctggacgtccgggaccggcggcagtacgagagggcgcac 254
               ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 5812799 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 5812840



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                           
Query: 333     cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 392
               |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 5814087 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 5814146

                                                                    
Query: 393     accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctg 445
               ||||||| ||| | |   ||||||||||||||||||||||||||||| |||||
Sbjct: 5814147 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctg 5814199



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                    
Query: 7       aaatggcagttcttggtctatctactgccttctctcc 43
               |||||||||||||||||||||| ||||||||||||||
Sbjct: 5812426 aaatggcagttcttggtctatccactgccttctctcc 5812462



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 48      agaggttcttggatagctgtgaggctcaggaatggcgc 85
               ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 5812631 agaggttcttgtatagctgtgaggatcaggcatggcgc 5812668
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>dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0651G05
          Length = 153258

 Score =  155 bits (78), Expect = 1e-34
 Identities = 96/102 (94%)
 Strand = Plus / Plus

                                                                        
Query: 153  gaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 212
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 4285

                                                      
Query: 213  gtgctggacgtccgggaccggcggcagtacgagagggcgcac 254
            ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 4286 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 4327



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                        
Query: 333  cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 392
            |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 5574 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 5633

                                                                 
Query: 393  accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctg 445
            ||||||| ||| | |   ||||||||||||||||||||||||||||| |||||
Sbjct: 5634 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctg 5686



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                 
Query: 7    aaatggcagttcttggtctatctactgccttctctcc 43
            |||||||||||||||||||||| ||||||||||||||
Sbjct: 3913 aaatggcagttcttggtctatccactgccttctctcc 3949



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 48   agaggttcttggatagctgtgaggctcaggaatggcgc 85
            ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 4118 agaggttcttgtatagctgtgaggatcaggcatggcgc 4155
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>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0701E06
          Length = 123415

 Score =  155 bits (78), Expect = 1e-34
 Identities = 96/102 (94%)
 Strand = Plus / Plus

                                                                          
Query: 153    gaggtgagcttcgtggacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 212
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108944 gaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacg 109003

                                                        
Query: 213    gtgctggacgtccgggaccggcggcagtacgagagggcgcac 254
              ||||||||| |||||||||||  ||||  |||||||||||||
Sbjct: 109004 gtgctggacatccgggaccggacgcagcgcgagagggcgcac 109045



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                          
Query: 333    cacaacaacttcgccggcctcttctacggcctgtccttcaccaagctcaaccgggacttc 392
              |||| ||||||||||||||| |||| ||| ||  | |||||||| |  ||||  || |||
Sbjct: 110292 cacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttc 110351

                                                                   
Query: 393    accaagacggtgaggagcaagttctcgccggagagcaagctgctggtcgtctg 445
              ||||||| ||| | |   ||||||||||||||||||||||||||||| |||||
Sbjct: 110352 accaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctg 110404



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                   
Query: 7      aaatggcagttcttggtctatctactgccttctctcc 43
              |||||||||||||||||||||| ||||||||||||||
Sbjct: 108631 aaatggcagttcttggtctatccactgccttctctcc 108667



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 48     agaggttcttggatagctgtgaggctcaggaatggcgc 85
              ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 108836 agaggttcttgtatagctgtgaggatcaggcatggcgc 108873
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>ref|XM_470983.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gcggctggtggcggaggagggg 206
            ||||||||||||||||||||||
Sbjct: 1743 gcggctggtggcggaggagggg 1764
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 185    gcggctggtggcggaggagggg 206
              ||||||||||||||||||||||
Sbjct: 401313 gcggctggtggcggaggagggg 401292
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>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   gcggctggtggcggaggagggg 206
             ||||||||||||||||||||||
Sbjct: 85972 gcggctggtggcggaggagggg 85951
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   gcggctggtggcggaggagggg 206
             ||||||||||||||||||||||
Sbjct: 40065 gcggctggtggcggaggagggg 40044
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 182      gaagcggctggtggcggaggaggggtaca 210
                |||||||||||||| ||||||||| ||||
Sbjct: 12244815 gaagcggctggtggaggaggagggctaca 12244787
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>gb|AC012618.7| Homo sapiens chromosome 19 clone CTD-2666L21, complete sequence
          Length = 159451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 87     gccgggcggagtagcgggggcctgt 111
              |||||||||||||||||| ||||||
Sbjct: 125982 gccgggcggagtagcgggtgcctgt 125958
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>gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, complete sequence
          Length = 224573

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 87    gccgggcggagtagcgggggcctgt 111
             |||||||||||||||||| ||||||
Sbjct: 17458 gccgggcggagtagcgggtgcctgt 17434
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 182      gaagcggctggtggcggaggaggggtaca 210
                |||||||||||||| ||||||||| ||||
Sbjct: 12241578 gaagcggctggtggaggaggagggctaca 12241550
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>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds
          Length = 2310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 182 gaagcggctggtggcggaggaggggtaca 210
           |||||||||||||| ||||||||| ||||
Sbjct: 31  gaagcggctggtggaggaggagggctaca 59
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>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 182   gaagcggctggtggcggaggaggggtaca 210
             |||||||||||||| ||||||||| ||||
Sbjct: 14348 gaagcggctggtggaggaggagggctaca 14320
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>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     cccccaagaggttcttggata 62
              |||||||||||||||||||||
Sbjct: 118440 cccccaagaggttcttggata 118420
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>ref|XM_480789.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcggctggtggcggaggagg 204
           ||||||||||||||||||||
Sbjct: 134 gcggctggtggcggaggagg 153
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>ref|NM_195629.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0053D03.28), mRNA
          Length = 2736

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcggctggtggcggaggagg 204
           ||||||||||||||||||||
Sbjct: 630 gcggctggtggcggaggagg 649
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>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041C22, complete sequence
          Length = 161172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gcggctggtggcggaggagg 204
             ||||||||||||||||||||
Sbjct: 65995 gcggctggtggcggaggagg 66014
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     gctggacgtccgggaccggc 234
               ||||||||||||||||||||
Sbjct: 1633948 gctggacgtccgggaccggc 1633967
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>gb|AY657495.1| Synthetic construct Peudomonas aeruginosa clone FLH040548.01F
           PA0655 gene, partial cds
          Length = 648

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 tcttctacggcctgtccttc 371
           ||||||||||||||||||||
Sbjct: 353 tcttctacggcctgtccttc 372
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>gb|AY317504.1| Mus musculus olfactory receptor Olfr401 (Olfr401) gene, complete
           cds
          Length = 948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 caagctgctggtcgtctgcc 447
           ||||||||||||||||||||
Sbjct: 947 caagctgctggtcgtctgcc 928
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>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete
             sequence
          Length = 168186

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   caagctgctggtcgtctgcc 447
             ||||||||||||||||||||
Sbjct: 25869 caagctgctggtcgtctgcc 25888
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cgtggacggcgacgaggcga 183
              ||||||||||||||||||||
Sbjct: 246979 cgtggacggcgacgaggcga 246998
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>emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chromosome 11 Contains the
             genes for olfactory receptors MOR255-2, -1 and -6, a novel
             KRAB box containing protein, a high mobility group box 1
             (Hmgb1) pseudogene and a olfactory receptor MOR255
             pseudogene, complete sequence
          Length = 109397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   caagctgctggtcgtctgcc 447
             ||||||||||||||||||||
Sbjct: 80002 caagctgctggtcgtctgcc 79983
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>gb|AY073389.1| Mus musculus olfactory receptor MOR255-6 gene, complete cds
          Length = 948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 caagctgctggtcgtctgcc 447
           ||||||||||||||||||||
Sbjct: 947 caagctgctggtcgtctgcc 928
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>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0053D03, from chromosome 10, complete sequence
          Length = 199113

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gcggctggtggcggaggagg 204
              ||||||||||||||||||||
Sbjct: 139718 gcggctggtggcggaggagg 139737
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gcggctggtggcggaggagg 204
               ||||||||||||||||||||
Sbjct: 8116761 gcggctggtggcggaggagg 8116742
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gcggctggtggcggaggagg 204
               ||||||||||||||||||||
Sbjct: 7744565 gcggctggtggcggaggagg 7744584
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>gb|AE004500.1| Pseudomonas aeruginosa PAO1, section 61 of 529 of the complete genome
          Length = 11849

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  tcttctacggcctgtccttc 371
            ||||||||||||||||||||
Sbjct: 7432 tcttctacggcctgtccttc 7413
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    cttcgccggcctcttctacg 360
              ||||||||||||||||||||
Sbjct: 330774 cttcgccggcctcttctacg 330755
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>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1221_H04
          Length = 129387

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gcggctggtggcggaggagg 204
             ||||||||||||||||||||
Sbjct: 85288 gcggctggtggcggaggagg 85307
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>ref|NM_146706.1| Mus musculus olfactory receptor 401 (Olfr401), mRNA
          Length = 948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 caagctgctggtcgtctgcc 447
           ||||||||||||||||||||
Sbjct: 947 caagctgctggtcgtctgcc 928
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gcggctggtggcggaggagg 204
               ||||||||||||||||||||
Sbjct: 8121860 gcggctggtggcggaggagg 8121841
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      gcggctggtggcggaggagg 204
                ||||||||||||||||||||
Sbjct: 14922896 gcggctggtggcggaggagg 14922915
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     cttcgccggcctcttctacg 360
               ||||||||||||||||||||
Sbjct: 1554687 cttcgccggcctcttctacg 1554706


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,498,504
Number of Sequences: 3902068
Number of extensions: 2498504
Number of successful extensions: 51172
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50683
Number of HSP's gapped (non-prelim): 481
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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