ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4j22 |
|---|---|
| Clone Library Name | barley_pub |
>AROK_ARATH (Q9SJ05) Probable shikimate kinase, chloroplast precursor (EC| 2.7.1.71) Length = 292 Score = 86.7 bits (213), Expect = 4e-17 Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 4/170 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 +Y+VG + K + KL++ + Y + + L+E + G F E + ET+ Sbjct: 105 MYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETD 164 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDM----LKSKGAAA 358 LK+L+S +V+ G GAV+ N + G+SIW+DVPLE + + S+ Sbjct: 165 ALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLH 224 Query: 359 ISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLS 508 D++S A +L +D+ E Y ++ VSL+N+A++ GY ++ L+ Sbjct: 225 DESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLT 274
>AROK_LYCES (Q00497) Shikimate kinase, chloroplast precursor (EC 2.7.1.71)| Length = 300 Score = 74.7 bits (182), Expect = 1e-13 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 4/158 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 +Y+VG K + ++LA ++ Y + + L+E +GG F E + + ETE Sbjct: 107 VYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETE 166 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEL----AVNDMLKSKGAAA 358 L +L+ M LV+ G GAV+ N + G+S+W+DVPLE + KS+ Sbjct: 167 VLHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLH 226 Query: 359 ISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVA 472 D + + +L + E YA + VSL+N+A Sbjct: 227 EESGDVYDTTLKRLTTLMETRGENYANASARVSLENIA 264
>AROK_ANASP (Q8YXG9) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 181 Score = 62.4 bits (150), Expect = 7e-10 Identities = 34/133 (25%), Positives = 64/133 (48%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 +Y++G K + LLA + Y +L +++++ K F E+ E G+ ++E++ Sbjct: 10 LYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGEAGFRQIESD 68 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 370 L Q+ S L + G G V+ N L HG+ +W+DVP+++ + + D Sbjct: 69 VLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTTRPLLQDD 128 Query: 371 DSFSQAMAKLRQR 409 D + + L QR Sbjct: 129 DPKGKLRSLLEQR 141
>AROK_SYNY3 (P72796) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 189 Score = 62.0 bits (149), Expect = 9e-10 Identities = 43/151 (28%), Positives = 72/151 (47%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 ++++G + K + LLA + YR+ ++ L+E V GK F E E + ++ETE Sbjct: 15 LFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIERV-AGKAIADIFAEDGEDTFRDLETE 73 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 370 L L + V+ G G V+ N L HG+ IW+D LEL + L+ A + Sbjct: 74 VLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLL-ARLQGDEARPLLQV 132 Query: 371 DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 463 ++ + + L + L YA +D+ LQ Sbjct: 133 ENLEERLGNLLAQRQPL---YAQADLRFPLQ 160
>AROK_SYNEL (Q8DKH7) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 183 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/101 (30%), Positives = 49/101 (48%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 IY+VG K +LLA + Y ++ D + + F + E + E+E + Sbjct: 12 IYLVGMMGAGKTTTGRLLAQRLGYSFV-DTDAVITAFRQRPIREIFAQEGEPAFRELEQQ 70 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPL 313 L Q++S LV+ G G V+N N L HG+ +W+ VPL Sbjct: 71 VLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPL 111
>AROK_AQUAE (O67925) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 168 Score = 48.5 bits (114), Expect = 1e-05 Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLG--GKDALAAFRESDEKGYLEVE 184 IY++G C+ K + LL+ S+ + D+ E+V G F + E + ++E Sbjct: 3 IYLIGFMCSGKSTVGSLLSRSLNIPFY---DVDEEVQKREGLSIPQIFEKKGEAYFRKLE 59 Query: 185 TEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKGAAAI 361 E LK L+ ++V+ G G N L ++ G +++ID+P E+ + SK + Sbjct: 60 FEVLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKDSKERPLL 119 Query: 362 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTV 454 P + +++ +++ ++ Y+ +D+ V Sbjct: 120 KRP------LDEIKNLFEERRKIYSKADIKV 144
>AROK_CORGL (Q9X5D1) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 169 Score = 45.4 bits (106), Expect = 9e-05 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 + +VG K I + LA ++ + S++L+E G K A F E E + E+E Sbjct: 6 VVLVGLPGAGKSTIGRRLARALNTELVDSDELIERATG-KACGAVFSELGEPAFRELEAI 64 Query: 191 GLKQ-LTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDML--KSKGAAAI 361 + + L S G V+ G G+V+ + LL+ +WIDVP+E + +S+ Sbjct: 65 HVAEALKSSG--VVSLGGGSVLTESTRELLKGQDVVWIDVPVEEGIRRTANERSRPVLQA 122 Query: 362 SDPDSFSQAMAKLR-QRYDDLKERYAVSDVTVSLQNVASQLGYSSID 499 +DP + + K+R Y+++ ++ Q VA+ L + ID Sbjct: 123 ADPAEHYRNLVKVRTPLYEEVATYRLRTNNRSPQQVVAAVLHHLEID 169
>AROK_ACIAD (Q6F7E4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 44.3 bits (103), Expect = 2e-04 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 3/134 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 IY+VG K + + LA + +L S+ +E G F + E G+ ET Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERRTGATIPWI-FEKEGEIGFRSRETI 70 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKG--AAAI 361 L LTS LVL G G V N L+ GV +++ P+EL + + K + Sbjct: 71 VLDDLTSRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQRTYRDKNRPLLQV 130 Query: 362 SDPDSFSQAMAKLR 403 +P+ + + KLR Sbjct: 131 ENPEQRLRDLLKLR 144
>AROK_NEIMB (P63600) Putative shikimate kinase (EC 2.7.1.71)| Length = 170 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 + ++G K + + +A + YR+ S+ + G F E+G+ ET Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIA-AAAGVPIPTIFEMEGEQGFRSRETA 66 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDML--KSKGAAAI 361 LK+L + +VL G GAV+ N L+R G +++ P E + S+ + Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRCDNSRPLLQV 126 Query: 362 SDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 466 +DP +AKLR+ Y Y +D TV N Sbjct: 127 ADP------LAKLRELYAARDPVYRQTADFTVESAN 156
>AROK_NEIMA (P63599) Putative shikimate kinase (EC 2.7.1.71)| Length = 170 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 + ++G K + + +A + YR+ S+ + G F E+G+ ET Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIA-AAAGVPIPTIFEMEGEQGFRSRETA 66 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDML--KSKGAAAI 361 LK+L + +VL G GAV+ N L+R G +++ P E + S+ + Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRCDNSRPLLQV 126 Query: 362 SDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 466 +DP +AKLR+ Y Y +D TV N Sbjct: 127 ADP------LAKLRELYAARDPVYRQTADFTVESAN 156
>AROK_COREF (Q8FT30) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 169 Score = 39.7 bits (91), Expect = 0.005 Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 2/159 (1%) Frame = +2 Query: 11 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 190 + +VG K I + LA ++ + S++L+E G K F E E + E+E Sbjct: 6 VVLVGPPGAGKSTIGRRLARALNADLVDSDELIEKATG-KACGEVFSELGEPAFRELEAH 64 Query: 191 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDML--KSKGAAAIS 364 + + + +V G GA++ + LLR +WIDV + V +++ A Sbjct: 65 HVAEALNHDGVV-SLGGGAILTESTRELLREHDVVWIDVSVAEGVRRTAGERTRPVLAAD 123 Query: 365 DPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 481 DP + + + R+ + + V + S Q V +++ Sbjct: 124 DPVEHYRNLLETRRPLYEEVSTFRVRTNSRSPQQVVAEI 162
>AROK_NEIGO (O50467) Shikimate kinase (EC 2.7.1.71) (SK) (Fragment)| Length = 134 Score = 38.1 bits (87), Expect = 0.014 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 4/111 (3%) Frame = +2 Query: 146 FRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELA 322 F E+G+ ET LK+L + +VL G GAV+ N L+R G +++ P E Sbjct: 16 FEMEGEQGFRSRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL 75 Query: 323 VNDML--KSKGAAAISDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 466 + S+ ++DP +AKLR+ Y Y +D TV N Sbjct: 76 LERTRCDNSRPLLQVADP------LAKLRELYAARDPVYRQTADFTVESAN 120
>DUSC_VIBPA (Q87N01) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 322 Score = 35.4 bits (80), Expect = 0.093 Identities = 22/78 (28%), Positives = 34/78 (43%) Frame = +2 Query: 200 QLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDPDSF 379 + T + SL++C G + N N+ H +W DV L + KG + P+ Sbjct: 214 ETTGVDSLMVCRGAFNIPNLGNMVKHNHTPMVWSDVVDLLIYYSKFEMKGDKGLYYPNRV 273 Query: 380 SQAMAKLRQRYDDLKERY 433 Q A LRQ Y + E + Sbjct: 274 KQWFAYLRQSYPEANELF 291
>SYC2_NOCFA (Q5YVL0) Putative cysteinyl-tRNA synthetase 2 (EC 6.1.1.16)| (Cysteine--tRNA ligase 2) (CysRS 2) Length = 412 Score = 33.1 bits (74), Expect = 0.46 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Frame = +2 Query: 188 EGLKQLTSMGSLVLCCG---DGAVMNSTNLGLLRHGVS---IWIDVPLELAVNDMLKSKG 349 +G K S G+LVL DG + LGLL +W D LE A+ + + + Sbjct: 286 DGEKMSKSRGNLVLVSTLRKDGVDPAAIRLGLLDGHYRQDRMWTDAVLEAALARLARWRS 345 Query: 350 AAAISDPDSFSQAMAKLRQRY-DDLKERYAVSDVTVSLQNVASQLGYSSIDS 502 A A+S + +A+LRQ DDL A++ V V L Y DS Sbjct: 346 ATALSAGPAAHDTIARLRQHLADDLDSPKALAAVD---NWVTEALDYGGSDS 394
>INSK_ECOLI (P19769) Putative transposase insK for insertion sequence element| IS150 Length = 283 Score = 32.0 bits (71), Expect = 1.0 Identities = 13/50 (26%), Positives = 26/50 (52%) Frame = +2 Query: 356 AISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSL 505 A+S PD ++ ++ + Y + + RY VT+SL Q+ + ++ L Sbjct: 33 ALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRL 82
>ANT1_ONCVO (P21249) Major antigen (Myosin-like antigen)| Length = 2022 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%) Frame = +2 Query: 329 DMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERY-----AVSDVTVSLQNVASQLGYS 490 D LK K +I + +S A+ KLR YD L+ Y ++T ++Q++ S+L S Sbjct: 1156 DRLKQKLQRSIENAKKYSDALDKLRPEYDRLQNLYREKIKQAENLTQAVQDLESRLNQS 1214
>AROL_SALTY (P63603) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 181 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Frame = +2 Query: 8 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 187 P+Y+VG K I LA + +R+ ++ L+ + + ++A E + G Sbjct: 4 PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61 Query: 188 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 328 + S S V+ G G ++ N + R GV I++ P+ VN Sbjct: 62 TAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVN 109
>AROL_SALTI (P63604) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 181 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Frame = +2 Query: 8 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 187 P+Y+VG K I LA + +R+ ++ L+ + + ++A E + G Sbjct: 4 PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61 Query: 188 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 328 + S S V+ G G ++ N + R GV I++ P+ VN Sbjct: 62 TAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVN 109
>SUVH3_ARATH (Q9C5P4) Histone-lysine N-methyltransferase, H3 lysine-9 specific| SUVH3 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Suppressor of variegation 3-9 homolog protein 3) (Su(var)3-9 homolog protein 3) (Protein SET DOMAIN GR Length = 669 Score = 30.0 bits (66), Expect = 3.9 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 347 PCSSTCHSRLIQAGRRSRWRLHASAAPGW 261 PC ++C +R+IQ G +SR + + GW Sbjct: 478 PCHASCKNRVIQTGLKSRLEVFKTRNRGW 506
>SDHD_BACCR (Q81F73) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 443 Score = 30.0 bits (66), Expect = 3.9 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Frame = +2 Query: 155 SDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGL--------LRHGVSIWIDVP 310 ++E Y ++++ ++ S S+ AV ++ NLGL L V++ + Sbjct: 139 TEEDNYSVLDSDTCREFFSKYSI-------AVGSTGNLGLSIGIMSANLGFNVTVHMSAD 191 Query: 311 LELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSD 445 + D+L+SKG I D +S+A+ + R++ D Y V D Sbjct: 192 AKEWKKDLLRSKGVNVIEYEDDYSKAVEEGRRQADADPSCYFVDD 236
>KTHY_NEIMA (Q9JVE7) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 206 Score = 29.3 bits (64), Expect = 6.7 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Frame = +2 Query: 236 GDGAVMNSTNLGLLRHGV--------SIWIDVPLELAVN--DMLKSKGAAAISDPDSFSQ 385 G G M S ++ +L H V ++ +DVPLE+++ + K D F + Sbjct: 105 GGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQADFFMR 164 Query: 386 AMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 481 + R ERYAV D + L V + + Sbjct: 165 VRSVYLNRAAACPERYAVIDSNLGLDEVRNSI 196
>BAR1_CHITE (P02849) Balbiani ring protein 1 (Giant secretory protein I-A)| (GSP-IA) (Fragment) Length = 174 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Frame = -3 Query: 500 SRCCCSLAEKPH--------SVVKQ*HQKLHSAPSDHHNADGALPLPEKRNQGLK*LPPP 345 S+C C+ A KP S + S P + G+ P PEK ++G K P Sbjct: 27 SKCRCTSAGKPSRNSEPSKGSKPRPEKPSKGSKPRPEKPSKGSKPKPEKPSKGSKPRPER 86 Query: 344 CSSTCHSRLIQAGRRSRWRLHAS 276 C S + R R +AS Sbjct: 87 CGSAMRKAEAEKCARRNGRFNAS 109
>KTHY_NEIG1 (Q5F9Z5) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 206 Score = 28.9 bits (63), Expect = 8.7 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Frame = +2 Query: 236 GDGAVMNSTNLGLLRHGV--------SIWIDVPLELAVN--DMLKSKGAAAISDPDSFSQ 385 G G M S ++ +L H V ++ +DVPLE+++ + K D F + Sbjct: 105 GGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQAREKDRFEQEQADFFMR 164 Query: 386 AMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 481 R ERYAV D SL V + + Sbjct: 165 VRGVYLDRAAACPERYAVIDSNRSLDEVRNSI 196
>ITPR1_RAT (P29994) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1| inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP-3-R) Length = 2750 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Frame = +2 Query: 293 IWIDVPLELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLK-ERYAVSD-----VTV 454 +W ++P E+A++D S GA+ + F+Q M + + D+ +R+ SD +T Sbjct: 806 LWSEIPSEIAIDD-YDSSGASKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTF 864 Query: 455 SLQNVASQLGY 487 + N+A L Y Sbjct: 865 EVVNLARNLIY 875
>ITPR1_HUMAN (Q14643) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1| inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R) Length = 2758 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Frame = +2 Query: 293 IWIDVPLELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLK-ERYAVSD-----VTV 454 +W ++P E+A++D S GA+ + F+Q M + + D+ +R+ SD +T Sbjct: 807 LWSEIPSEIAIDD-YDSSGASKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTF 865 Query: 455 SLQNVASQLGY 487 + N+A L Y Sbjct: 866 EVVNLARNLIY 876
>SUVR5_ARATH (O64827) Histone-lysine N-methyltransferase SUVR5 (EC 2.1.1.43)| (Suppressor of variegation 3-9-related protein 5) (Su(var)3-9-related protein 5) (Protein SET DOMAIN GROUP 6) Length = 203 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -3 Query: 344 CSSTCHSRLIQAGRRSRWRLHASAAPGW 261 CS TC +R++Q G R++ + + + GW Sbjct: 30 CSRTCQNRVLQNGIRAKLEVFRTESKGW 57
>OXR1_RAT (Q4V8B0) Oxidation resistance protein 1 (Protein C7)| Length = 758 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 178 SRDRGAEAAHVHGQPGALLRRWRRHELHQ 264 S+ RGA A HG+ +LL+ RRH LH+ Sbjct: 441 SKHRGAPA-DAHGEGSSLLKEKRRHRLHK 468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,435,183 Number of Sequences: 219361 Number of extensions: 1160561 Number of successful extensions: 3987 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3982 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
