Clone Name | baak4j21 |
---|---|
Clone Library Name | barley_pub |
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 262 bits (670), Expect = 4e-70 Identities = 130/142 (91%), Positives = 132/142 (92%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNSL QAVVEGTGDHCCEYMTGGCVVVLGK GRNVAAGMTGGLAY+LDEDDTLVPKV Sbjct: 1475 FAVRNSLCQAVVEGTGDHCCEYMTGGCVVVLGKAGRNVAAGMTGGLAYILDEDDTLVPKV 1534 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG IL EWEAYLPLFWQLVPPSEEDS Sbjct: 1535 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAILREWEAYLPLFWQLVPPSEEDS 1594 Query: 361 PEACAEFERVLARQKTAVQSAK 426 PEACAEFERVLA+Q T SAK Sbjct: 1595 PEACAEFERVLAKQATTQLSAK 1616
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 233 bits (593), Expect = 3e-61 Identities = 112/141 (79%), Positives = 127/141 (90%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNSL +AVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAY+LDEDDTL+PKV Sbjct: 1378 FAVRNSLAEAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKV 1437 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 NKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL +W+ YLPLFWQLVPPSEED+ Sbjct: 1438 NKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASILKDWDKYLPLFWQLVPPSEEDT 1497 Query: 361 PEACAEFERVLARQKTAVQSA 423 PEA A FE+ + + ++QSA Sbjct: 1498 PEASAMFEQ-MTSEGASLQSA 1517
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 229 bits (585), Expect = 3e-60 Identities = 109/136 (80%), Positives = 123/136 (90%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNSL +AVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY+LDEDDTL+PK+ Sbjct: 1509 FAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYLLDEDDTLLPKI 1568 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL+EWE YLPLFWQLVPPSEED+ Sbjct: 1569 NREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLPLFWQLVPPSEEDT 1628 Query: 361 PEACAEFERVLARQKT 408 PEA A + R + T Sbjct: 1629 PEASAAYVRTSTGEVT 1644
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 214 bits (546), Expect = 8e-56 Identities = 100/123 (81%), Positives = 114/123 (92%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNSL QAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAY+LDED+TL+PK+ Sbjct: 1484 FAVRNSLAQAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDNTLLPKM 1543 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+ EW+ YL +FWQLVPPSEED+ Sbjct: 1544 NKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKYLAMFWQLVPPSEEDT 1603 Query: 361 PEA 369 PEA Sbjct: 1604 PEA 1606
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 173 bits (438), Expect = 3e-43 Identities = 83/123 (67%), Positives = 95/123 (77%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNS+G+AV+EG GDHCCEYMTGG +VVLG VGRNV AGMTGGLAY LDE L K+ Sbjct: 1419 FAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKI 1478 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N EI+ +QR+ A G+ QLK LI A+VE TGS KG IL+ W YL FWQ VPPSE+DS Sbjct: 1479 NPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDS 1538 Query: 361 PEA 369 PEA Sbjct: 1539 PEA 1541
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 164 bits (415), Expect = 1e-40 Identities = 79/122 (64%), Positives = 91/122 (74%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNSL ++VVEG GDH CEYMTGG +VVLGK GRNV AGMTGGLAY LDE++ + +V Sbjct: 1404 FAVRNSLAKSVVEGVGDHACEYMTGGTIVVLGKAGRNVGAGMTGGLAYFLDEENKFIERV 1463 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N EIVK+QRV AG+ QLK LIE + KTGS K IL W YLP FWQ+VPPSE + Sbjct: 1464 NSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNILENWNTYLPQFWQVVPPSEANI 1523 Query: 361 PE 366 E Sbjct: 1524 EE 1525
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 146 bits (369), Expect = 3e-35 Identities = 73/122 (59%), Positives = 88/122 (72%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNS +V+EG GDH CEYMTGG VVVLGK GRN+AAGMTGG+AY LDE L KV Sbjct: 1416 FAVRNSNAFSVLEGVGDHACEYMTGGRVVVLGKAGRNIAAGMTGGIAYFLDEYSNLPEKV 1475 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N +IV++QRV + QL LIE +V KTGS K IL +WE ++ FWQ+VPPSE ++ Sbjct: 1476 NLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLILQQWEIFIHYFWQIVPPSESET 1535 Query: 361 PE 366 E Sbjct: 1536 SE 1537
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 144 bits (364), Expect = 1e-34 Identities = 71/118 (60%), Positives = 84/118 (71%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNS G +VVEG GDH CEYMTGG +VVLG GRN+ AGMTGG+AY LDED+TL K+ Sbjct: 1404 FAVRNSNGYSVVEGVGDHACEYMTGGLIVVLGTFGRNIGAGMTGGIAYFLDEDNTLKNKL 1463 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 354 N EIVK QR+ + QLK ++E Y KT S K IL W YL F+Q+VPPSE+ Sbjct: 1464 NTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLILDNWSQYLAKFYQIVPPSEQ 1521
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 115 bits (289), Expect = 5e-26 Identities = 60/114 (52%), Positives = 76/114 (66%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNS VVEG G + CEYMTGG V+LG+VG N AAGMTGG+AY+ D DD+L + Sbjct: 1382 FAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAGMTGGMAYVYDLDDSLPLYI 1441 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 342 N E V QR+ + QLK LIE +V +T S A+IL++W + FWQ+VP Sbjct: 1442 NDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWAREVTKFWQVVP 1495
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 112 bits (281), Expect = 5e-25 Identities = 60/140 (42%), Positives = 85/140 (60%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 F VRNS VVE GDH CEYMTGG VVVLG+ GRN AAGM+GG+AY+ DE + Sbjct: 1396 FCVRNSGVNTVVEAVGDHGCEYMTGGKVVVLGQTGRNFAAGMSGGVAYIFDETGDFATRC 1455 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N +V ++++ P LK LI+ +V T S KG +L++WEA +P F +++P Sbjct: 1456 NSAMVGLEKLEDPEEIKDLKELIQNHVNYTDSAKGKAVLADWEASIPKFVKVMP------ 1509 Query: 361 PEACAEFERVLARQKTAVQS 420 +++RVL K A+++ Sbjct: 1510 ----RDYKRVLQAIKKALEA 1525
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 111 bits (278), Expect = 1e-24 Identities = 63/140 (45%), Positives = 83/140 (59%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 F VRNS AVVEG GDH CEYMTGG VVVLGK GRN AAGM+GG+AY+LD D T + Sbjct: 1495 FCVRNSGALAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGTFQSRC 1554 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N E+V + +V + L+ LI+ + T S ++L ++E LP F ++ P Sbjct: 1555 NLELVDLDKVEEEEDIITLRMLIQQHQRHTNSLLAKEVLVDFENLLPKFVKVFP------ 1608 Query: 361 PEACAEFERVLARQKTAVQS 420 E++RVLA K+ S Sbjct: 1609 ----REYKRVLASMKSDAAS 1624
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 107 bits (267), Expect = 2e-23 Identities = 62/140 (44%), Positives = 79/140 (56%), Gaps = 1/140 (0%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 F VRNS VVEG GD+ CEYMTGG V +LGK G N AGMTGG AY+LDE +V Sbjct: 1379 FGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRV 1438 Query: 181 NKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEED 357 N E+V++ V+A A + L+GLI +V+ TGS +G +IL+ W + F LV P D Sbjct: 1439 NPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKF-ALVKPKSSD 1497 Query: 358 SPEACAEFERVLARQKTAVQ 417 R A + Q Sbjct: 1498 VKALLGHRSRSAAELRVQAQ 1517
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 106 bits (265), Expect = 3e-23 Identities = 62/142 (43%), Positives = 83/142 (58%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180 FAVRNS AVVEG GDH CEYMTGG VV+LG GRN AAGM+GG+AY+ D K+ Sbjct: 1438 FAVRNSGAIAVVEGVGDHGCEYMTGGRVVILGSTGRNFAAGMSGGIAYVYDMQMDFAGKI 1497 Query: 181 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360 N E+V + V A L+GLI+ + TGS +ILS++ +L F +++P Sbjct: 1498 NTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRILSDFPRHLSRFVKVLP------ 1551 Query: 361 PEACAEFERVLARQKTAVQSAK 426 E++ VL R+ + AK Sbjct: 1552 ----REYKAVLEREAAKKEEAK 1569
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 100 bits (250), Expect = 2e-21 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +1 Query: 1 FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDED-DTLVPK 177 FAVRNS VVEG GDH CEYMTGG VVVLG VG+N AAGM+GG+AY+L ED K Sbjct: 1357 FAVRNSGVNVVVEGIGDHGCEYMTGGSVVVLGDVGKNFAAGMSGGIAYVLTEDVKRFKRK 1416 Query: 178 VNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 342 N E++ + + Q+K ++E + T S K +L +WE + F +++P Sbjct: 1417 CNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDLLDQWEDSVKKFVKVIP 1471
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 73.2 bits (178), Expect = 4e-13 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Frame = +1 Query: 1 FAVRNSLGQAVVEGT-GDHCCEYMTGGCVVVLGKV-GRNVAAGMTGGLAYMLDED-DTLV 171 F VRNS VVE G++ EYMTGG +VL ++ N +G TGG+AY L D D V Sbjct: 1430 FGVRNSGATIVVERIKGNNAFEYMTGGRAIVLSQMESLNAFSGATGGIAYCLTSDYDDFV 1489 Query: 172 PKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSE 351 K+NK+ V+++ + P +K LI+ + T S A+IL + YL F +++P Sbjct: 1490 GKINKDTVELESLCDPVEIAFVKNLIQEHWNYTQSDLAARILGNFNHYLKDFVKVIP--- 1546 Query: 352 EDSPEACAEFERVLARQKTAVQSAK 426 ++++VL ++K AK Sbjct: 1547 -------TDYKKVLLKEKAEAAKAK 1564
>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)| Length = 3013 Score = 32.3 bits (72), Expect = 0.78 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +2 Query: 320 HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 442 +SS S HP KKTL + + SL + + GKK +++ D S Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307
>MINC_THEMA (Q9X0D7) Probable septum site-determining protein minC| Length = 210 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 22 GQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGG 135 G +V G + E + GG VVV GK N+ AG+ G Sbjct: 118 GDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEG 155
>NARG_BACSU (P42175) Nitrate reductase alpha chain (EC 1.7.99.4)| Length = 1228 Score = 30.4 bits (67), Expect = 3.0 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 3/110 (2%) Frame = +1 Query: 100 VGRNVAAGMTG--GLAYML-DEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKT 270 +G NVA +G G+++ + DE ++L ++ EI + K EA + + Sbjct: 896 LGPNVALKPSGTKGMSWSIADEYESLKQRLG-EITSDSVAKGCPNISEAKQAAEAILTLS 954 Query: 271 GSTKGAKILSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 420 ++ G + WE+ + + E+ E C FE++ A+ KT + S Sbjct: 955 STSNGKVAVKAWESLENITNLKLKDLAEEREEECFTFEQITAQPKTVITS 1004
>Y1350_METJA (Q58745) Hypothetical protein MJ1350| Length = 261 Score = 30.0 bits (66), Expect = 3.9 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 10/48 (20%) Frame = +1 Query: 49 DHCCEYMTGGCVVV---------LGKV-GRNVAAGMTGGLAYMLDEDD 162 D EYM GG ++V LGKV GR + G+ GG Y+ E D Sbjct: 147 DFLGEYMAGGIIIVLNIDEKGNDLGKVKGRMIGTGIHGGAIYIRGEID 194
>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2| Length = 853 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -1 Query: 360 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 193 R+F ++ L E+W CL L + F+ + + G+ LE P+ + +L+ Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575 Query: 192 NLLVNLWD 169 ++ V LWD Sbjct: 576 SIDVMLWD 583
>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver| regeneration-related protein LRRGT00092) Length = 125 Score = 30.0 bits (66), Expect = 3.9 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Frame = +1 Query: 169 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 327 V + + I+++ R P LK L + YV+ G + + L EWE Y + Sbjct: 9 VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64 Query: 328 WQLVPPSEEDSP-EAC 372 WQ S + S +AC Sbjct: 65 WQQAKDSRQSSSGKAC 80
>HFW1_DROPS (P84329) Protein halfway (Protein singed wings)| Length = 587 Score = 29.3 bits (64), Expect = 6.6 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = +3 Query: 60 RVHDWWMCSCTRQSWKKRCSRNDRWPSLHV 149 + + W+ C+ ++ S CS +W +LHV Sbjct: 176 KANSWYCCNISQMSMISSCSNISKWTNLHV 205
>NEUT_HUMAN (P30990) Neurotensin/neuromedin N precursor [Contains: Large| neuromedin N (NmN-125); Neuromedin N (NmN) (NN); Neurotensin (NT); Tail peptide] Length = 170 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/49 (24%), Positives = 24/49 (48%) Frame = -1 Query: 321 WQICLPLAQNFSTFRAARFFNIGLNQALELHLPSWSINSLHLDNLLVNL 175 W +C + A N+ ++ + H+PSW + L++ +L+ NL Sbjct: 20 WSLCSDSEEEMKALEADFLTNMHTSKISKAHVPSWKMTLLNVCSLVNNL 68
>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)| Length = 3027 Score = 29.3 bits (64), Expect = 6.6 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +2 Query: 323 SSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 442 +S S HP KKTL + + SL + + GKK ++ D S Sbjct: 1270 NSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDS 1309
>SYD_SALTY (Q8ZNV2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 590 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294 GLAY+ KVN+ + +N+P + ++EA +E+TG+ G I Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392
>SYD_SALTI (Q8Z5W1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 590 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294 GLAY+ KVN+ + +N+P + ++EA +E+TG+ G I Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392
>SYD_SALPA (Q5PMZ6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 590 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294 GLAY+ KVN+ + +N+P + ++EA +E+TG+ G I Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392
>SYD_ECOL6 (Q8FGQ9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 590 Score = 29.3 bits (64), Expect = 6.6 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294 GLAY+ KVN+ ++ +N+P + +IEA +E+TG+ G I Sbjct: 348 GLAYI---------KVNERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMI 392
>PEX5_HUMAN (P50542) Peroxisomal targeting signal 1 receptor (Peroxismore| receptor 1) (Peroxisomal C-terminal targeting signal import receptor) (PTS1-BP) (Peroxin-5) (PTS1 receptor) Length = 602 Score = 28.9 bits (63), Expect = 8.6 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 Query: 217 PAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 354 P Q L L ++ ++ + + L +W Y P + LV P+EE Sbjct: 363 PDNQTALMALAVSFTNESLQRQACETLRDWLRYTPAYAHLVTPAEE 408
>TRUB_BACSK (Q5WFU5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 28.9 bits (63), Expect = 8.6 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 11/57 (19%) Frame = +1 Query: 142 YMLDEDDTLVPKV-----------NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGST 279 YM D D T + +V + E+V+ +RVN P + +++ L++A++ K T Sbjct: 60 YMSDYDKTYIGEVTFGVATTTEDAHGEVVEEKRVNKPFTRTEIEALLQAFIGKIEQT 116
>FMDC_METBF (Q48943) Molybdenum-containing formylmethanofuran dehydrogenase 1| subunit C (EC 1.2.99.5) (Molybdenum-containing formylmethanofuran dehydrogenase I subunit C) Length = 301 Score = 28.9 bits (63), Expect = 8.6 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Frame = +1 Query: 22 GQAVVEGTGDHCCEY-MTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKVNKEIVK 198 G+ +VEG C GG + V G R V A M GG + + + P E V Sbjct: 201 GEILVEGDVKSFCGIRQNGGLIFVKGSALRGVGAEMAGGTIVIGGKIERFSP--GFEFVS 258 Query: 199 MQRVNAPAGQMQLKGLIEAYVEKTGSTKGAK 291 M+ + +G+++L G + + +K AK Sbjct: 259 MEN-SITSGEVELIGEFKKFTGDYAISKRAK 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,836,164 Number of Sequences: 219361 Number of extensions: 1445973 Number of successful extensions: 4567 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4413 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4563 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)