ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4j03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106167.1| Zea mays PCO141571 mRNA sequence Length = 641 Score = 422 bits (213), Expect = e-115 Identities = 297/325 (91%) Strand = Plus / Plus Query: 52 gcagccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaag 111 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| | Sbjct: 54 gcagccatggtgaacgttccgaaaaccaagaagacctactgtaagaacaaggaatgcagg 113 Query: 112 aagcacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctcag 171 ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 114 aagcacaccctgcacaaggttacccagtacaagaaaggtaaggatagcctttcagctcaa 173 Query: 172 gggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttc 231 |||||||| || ||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 174 gggaagcgacgttatgaccgcaaacagtctggatatggtggtcagacaaagcctgttttc 233 Query: 232 cacaagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaag 291 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 234 cacaagaaggcaaaaacaacaaagaagattgtgctgaagctgcagtgccagagctgcaag 293 Query: 292 cactactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||| |||| | ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 294 cactactctcaacacccgatcaagaggtgcaagcactttgagatcggtggtgacaagaaa 353 Query: 352 ggcaagggaacatctctcttctaag 376 ||||||||||| ||||| ||||||| Sbjct: 354 ggcaagggaacctctctgttctaag 378
>ref|NM_187105.2| Oryza sativa (japonica cultivar-group), mRNA Length = 701 Score = 418 bits (211), Expect = e-114 Identities = 304/335 (90%) Strand = Plus / Plus Query: 55 gccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaag 114 |||||||||||||| || || || |||||||| ||||| ||||||||||| |||| |||| Sbjct: 74 gccatggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaag 133 Query: 115 cacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctcagggg 174 |||||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||||| Sbjct: 134 cacaccctacacaaggttacccagtacaagaaaggaaaggatagcctttctgctcagggg 193 Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 194 aagcgtcgttatgaccgcaagcagtcaggatatggtgggcagacaaagcctgtttttcac 253 Query: 235 aagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcac 294 |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 254 aagaaggccaagacaacaaagaagatcgttctgaagctgcagtgccagagctgcaagcac 313 Query: 295 tactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 354 ||||| || | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 tactctcagcacccgatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 373 Query: 355 aagggaacatctctcttctaagatgatgatcttgc 389 |||||||| || ||||||||||||| |||| |||| Sbjct: 374 aagggaacttcactcttctaagatgctgatattgc 408
>dbj|AK121702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073H17, full insert sequence Length = 725 Score = 418 bits (211), Expect = e-114 Identities = 304/335 (90%) Strand = Plus / Plus Query: 55 gccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaag 114 |||||||||||||| || || || |||||||| ||||| ||||||||||| |||| |||| Sbjct: 98 gccatggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaag 157 Query: 115 cacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctcagggg 174 |||||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||||| Sbjct: 158 cacaccctacacaaggttacccagtacaagaaaggaaaggatagcctttctgctcagggg 217 Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 218 aagcgtcgttatgaccgcaagcagtcaggatatggtgggcagacaaagcctgtttttcac 277 Query: 235 aagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcac 294 |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 278 aagaaggccaagacaacaaagaagatcgttctgaagctgcagtgccagagctgcaagcac 337 Query: 295 tactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 354 ||||| || | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 tactctcagcacccgatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 397 Query: 355 aagggaacatctctcttctaagatgatgatcttgc 389 |||||||| || ||||||||||||| |||| |||| Sbjct: 398 aagggaacttcactcttctaagatgctgatattgc 432
>dbj|AK063789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E03, full insert sequence Length = 701 Score = 418 bits (211), Expect = e-114 Identities = 304/335 (90%) Strand = Plus / Plus Query: 55 gccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaag 114 |||||||||||||| || || || |||||||| ||||| ||||||||||| |||| |||| Sbjct: 74 gccatggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaag 133 Query: 115 cacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctcagggg 174 |||||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||||| Sbjct: 134 cacaccctacacaaggttacccagtacaagaaaggaaaggatagcctttctgctcagggg 193 Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 194 aagcgtcgttatgaccgcaagcagtcaggatatggtgggcagacaaagcctgtttttcac 253 Query: 235 aagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcac 294 |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 254 aagaaggccaagacaacaaagaagatcgttctgaagctgcagtgccagagctgcaagcac 313 Query: 295 tactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 354 ||||| || | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 tactctcagcacccgatcaagaggtgcaagcactttgaaatcggtggagacaagaagggc 373 Query: 355 aagggaacatctctcttctaagatgatgatcttgc 389 |||||||| || ||||||||||||| |||| |||| Sbjct: 374 aagggaacttcactcttctaagatgctgatattgc 408
>gb|AY109380.1| Zea mays CL2281_1 mRNA sequence Length = 1446 Score = 387 bits (195), Expect = e-104 Identities = 288/319 (90%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 493 atggtgaacgttcctaagaccaagaagacctactgcaagaacaaagagtgcaagaagcac 552 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || |||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||| ||| Sbjct: 553 actctccacaaggttactcagtacaagaagggtaaggatagcctgtctgcccagggaaag 612 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 || || ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 613 cgccgttatgaccgcaagcagtcaggatatggtggccagaccaagcctgtcttccacaag 672 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||| |||| Sbjct: 673 aaggccaagaccaccaagaaaatcgtattgaagctgcagtgccagagctgcaagccctac 732 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 ||||| | || || |||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 733 tcacagcacgcaattaagaggtgcaagcattttgagattggtggagacaagaagggcaag 792 Query: 358 ggaacatctctcttctaag 376 || |||||||||||||||| Sbjct: 793 ggcacatctctcttctaag 811
>gb|BT016180.1| Zea mays clone Contig13 mRNA sequence Length = 640 Score = 379 bits (191), Expect = e-102 Identities = 281/311 (90%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 90 atggtgaacgttcctaagaccaagaagacgtactgcaagaacaaagagtgcaagaagcac 149 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || ||||||||||| || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 150 acactccacaaggtgactcagtataagaagggcaaggatagcctgtctgcccagggaaag 209 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 || || ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 210 cgccgttatgaccgcaagcagtcaggatatggtggtcagaccaagcctgtcttccacaag 269 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 270 aaggccaagaccaccaagaagattgttctgaagctgcagtgccagagctgcaagcactac 329 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 ||||| | || |||||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 330 tcacagcacgccatcaagagatgcaagcattttgagattggtggagacaagaagggcaag 389 Query: 358 ggaacatctct 368 || |||||||| Sbjct: 390 ggcacatctct 400
>dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C02, full insert sequence Length = 2173 Score = 361 bits (182), Expect = 2e-96 Identities = 284/318 (89%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1698 atggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcac 1757 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct: 1758 acccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaag 1817 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 || || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 1818 cgccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaag 1877 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| || || || |||||||||||||||||| |||| ||||| ||||||||||| ||| Sbjct: 1878 aaggcaaaaaccaccaagaagattgtgctgaagctgcaatgccaaagctgcaagcattac 1937 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || | | ||||||||||||||||| || || || ||||||||||||||||||||| Sbjct: 1938 tcccagcaccccatcaagaggtgcaagcatttcgagattggtggagacaagaagggcaag 1997 Query: 358 ggaacatctctcttctaa 375 ||||||||||| |||||| Sbjct: 1998 ggaacatctcttttctaa 2015
>gb|DQ019457.1| Lilium longiflorum clone LP07 ribosomal protein-like mRNA, partial sequence Length = 526 Score = 311 bits (157), Expect = 1e-81 Identities = 277/317 (87%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| Sbjct: 58 atggtgaacgttccgaagacaaagaagacttactgcaagaacaaggcatgcaagaagcac 117 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || | || |||||||||||||||||||||||||| ||||| || | || || |||||| Sbjct: 118 acattgcataaggttacccagtataagaagggtaaagacagtctgtgtgtgcaagggaag 177 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 || || |||||| | ||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 178 cggcggtatgacaggaagcagtctggctatggtggacagaccaagcctgtttttcacaag 237 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||||||||||||||||||||||||||||||| |||| |||||| ||| ||||| | Sbjct: 238 aaggccaagacaacaaagaagattgtgctgaagctgcaatgccagtcctgtaagcatgtc 297 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 ||||||| | || |||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 298 tcacaacacccgattaagaggtgcaagcattttgagatcggtggagataagaaggggaag 357 Query: 358 ggaacatctctcttcta 374 ||||||||||||||||| Sbjct: 358 ggaacatctctcttcta 374
>dbj|AK058924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C01, full insert sequence Length = 676 Score = 311 bits (157), Expect = 1e-81 Identities = 256/289 (88%) Strand = Plus / Plus Query: 87 ctactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagtataagaa 146 ||||||||||||||||||||||| |||||||||||| |||||||| || ||||| ||||| Sbjct: 1 ctactgcaagaacaaggagtgcaggaagcacacccttcacaaggtcactcagtacaagaa 60 Query: 147 gggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctggata 206 ||||||||||||||| ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 61 gggtaaggacagcctgtctgcccagggaaagcgccgttatgaccgtaagcagtcaggata 120 Query: 207 tggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgct 266 |||||| ||||| ||||||||||||||||||||||| || || || |||||||||||||| Sbjct: 121 tggtggtcagaccaagcctgttttccacaagaaggcaaaaaccaccaagaagattgtgct 180 Query: 267 gaagttgcagtgccagagctgcaagcactactcacaacgtgctatcaagaggtgcaagca 326 |||| |||| ||||| ||||||||||| ||||| || | | ||||||||||||||||| Sbjct: 181 gaagctgcaatgccaaagctgcaagcattactcccagcaccccatcaagaggtgcaagca 240 Query: 327 ctttgaaatcggtggagacaagaagggcaagggaacatctctcttctaa 375 || || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 241 tttcgagattggtggagacaagaagggcaagggaacatctcttttctaa 289
>dbj|D10406.1|RIC340 Oryza sativa mRNA for ribosomal protein L41 (340 gene), partial sequence Length = 444 Score = 293 bits (148), Expect = 3e-76 Identities = 214/236 (90%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 46 atggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcac 105 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct: 106 acccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaag 165 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 || || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 166 cgccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaag 225 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagca 293 ||||| || || || |||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 226 aaggcaaaaaccaccaagaagattgtgctgaagctgcaatgccaaagctgcaagca 281
>gb|AF398144.1|AF398144 Brassica rapa subsp. pekinensis 60S ribosomal protein L144 mRNA, partial cds Length = 518 Score = 283 bits (143), Expect = 3e-73 Identities = 275/319 (86%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| |||| ||||| ||||| || ||||||||||||||||| |||||||| || Sbjct: 43 atggtgaacattcccaagacaaagaaaacttactgcaagaacaaggaatgcaagaaacat 102 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||| Sbjct: 103 accttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaag 162 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 163 cgtcgttatgaccgtaagcaatctggttatggtggtcagaccaagcctgtcttccacaag 222 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || ||||||||||| ||| | | |||||||| | ||||||||||| | Sbjct: 223 aaggctaagaccacgaagaagattgtcttgaggcttcagtgccaaacctgcaagcacttc 282 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || | | ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 283 tctcagcactcgatcaagaggtgcaagcattttgaaatcggtggagacaagaagggcaag 342 Query: 358 ggaacatctctcttctaag 376 |||||||| || ||||||| Sbjct: 343 ggaacatcacttttctaag 361
>ref|NM_117509.1| Arabidopsis thaliana structural constituent of ribosome AT4G14320 mRNA, complete cds Length = 533 Score = 276 bits (139), Expect = 8e-71 Identities = 274/319 (85%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 80 atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 139 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||| Sbjct: 140 accttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaag 199 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct: 200 cgtcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaag 259 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| | | Sbjct: 260 aaggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagcatttc 319 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 320 tcgcaacgcccgattaagaggtgcaagcactttgagatcggtggagacaagaagggaaag 379 Query: 358 ggaacatctctcttctaag 376 |||||||||||||| |||| Sbjct: 380 ggaacatctctcttttaag 398
>gb|AY081639.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete cds Length = 371 Score = 276 bits (139), Expect = 8e-71 Identities = 274/319 (85%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 1 atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 60 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||| Sbjct: 61 accttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaag 120 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct: 121 cgtcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaag 180 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| | | Sbjct: 181 aaggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagcatttc 240 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 241 tcgcaacgcccgattaagaggtgcaagcactttgagatcggtggagacaagaagggaaag 300 Query: 358 ggaacatctctcttctaag 376 |||||||||||||| |||| Sbjct: 301 ggaacatctctcttttaag 319
>gb|AY065121.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete cds Length = 494 Score = 276 bits (139), Expect = 8e-71 Identities = 274/319 (85%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 55 atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 114 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||| Sbjct: 115 accttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaag 174 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct: 175 cgtcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaag 234 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| | | Sbjct: 235 aaggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagcatttc 294 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 295 tcgcaacgcccgattaagaggtgcaagcactttgagatcggtggagacaagaagggaaag 354 Query: 358 ggaacatctctcttctaag 376 |||||||||||||| |||| Sbjct: 355 ggaacatctctcttttaag 373
>emb|BX829272.1|CNS0A2I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 480 Score = 276 bits (139), Expect = 8e-71 Identities = 274/319 (85%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 39 atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 98 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||| Sbjct: 99 accttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaag 158 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct: 159 cgtcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaag 218 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| | | Sbjct: 219 aaggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagcatttc 278 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 279 tcgcaacgcccgattaagaggtgcaagcactttgagatcggtggagacaagaagggaaag 338 Query: 358 ggaacatctctcttctaag 376 |||||||||||||| |||| Sbjct: 339 ggaacatctctcttttaag 357
>gb|AY085784.1| Arabidopsis thaliana clone 18153 mRNA, complete sequence Length = 533 Score = 268 bits (135), Expect = 2e-68 Identities = 273/319 (85%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 80 atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 139 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||| Sbjct: 140 accttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaag 199 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct: 200 cgtcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaag 259 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || |||||||||||||||| | | || ||||| ||||||||||| | | Sbjct: 260 aaggctaagacgactaagaagattgtgctgaggcttcaatgccaaagctgcaagcatttc 319 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 320 tcgcaacgcccgattaagaggtgcaagcactttgagatcggtggagacaagaagggaaag 379 Query: 358 ggaacatctctcttctaag 376 |||||||||||||| |||| Sbjct: 380 ggaacatctctcttttaag 398
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20257687 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20257746 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20257747 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20257806 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20257807 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20257866 Query: 240 gg 241 || Sbjct: 20257867 gg 20257868 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20251521 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20251580 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20251581 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20251640 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20251641 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20251700 Query: 240 gg 241 || Sbjct: 20251701 gg 20251702 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20239469 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20239528 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20239529 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20239588 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20239589 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20239648 Query: 240 gg 241 || Sbjct: 20239649 gg 20239650 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20233302 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20233361 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20233362 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20233421 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20233422 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20233481 Query: 240 gg 241 || Sbjct: 20233482 gg 20233483 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20221252 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20221311 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20221312 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20221371 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20221372 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20221431 Query: 240 gg 241 || Sbjct: 20221432 gg 20221433 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20215085 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20215144 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20215145 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20215204 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20215205 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20215264 Query: 240 gg 241 || Sbjct: 20215265 gg 20215266 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20208521 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20208580 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20208581 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20208640 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20208641 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20208700 Query: 240 gg 241 || Sbjct: 20208701 gg 20208702 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20204151 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20204210 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 20204211 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 20204270 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20204271 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 20204330 Query: 240 gg 241 || Sbjct: 20204331 gg 20204332 Score = 218 bits (110), Expect = 2e-53 Identities = 164/182 (90%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 ||||||||| || || || |||||||| ||||| ||||||||||| |||| ||||||||| Sbjct: 15396992 ggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcacac 15397051 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 15397052 cctacacaaggttacccagtacaagaaaggaaaggatagcctttctgctcaggggaagcg 15397111 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 ||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 15397112 tcgttatgaccgcaagcagtcaggatatggtgggcagacaaagcctgtttttcacaagaa 15397171 Query: 240 gg 241 || Sbjct: 15397172 gg 15397173 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 15397464 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacttcactcttct 15397523 Query: 374 aagatgatgatcttgc 389 |||||| |||| |||| Sbjct: 15397524 aagatgctgatattgc 15397539 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 239 aggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactact 298 |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| Sbjct: 15397284 aggccaagacaacaaagaagatcgttctgaagctgcagtgccagagctgcaagcactact 15397343 Query: 299 c 299 | Sbjct: 15397344 c 15397344 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 20209060 agaggtgcaagcattttgaaattggtggagacaagaagggcaagggaacgtctcttttct 20209119 Query: 374 aa 375 || Sbjct: 20209120 aa 20209121 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20258228 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20258287 Query: 374 aa 375 || Sbjct: 20258288 aa 20258289 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20252070 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20252129 Query: 374 aa 375 || Sbjct: 20252130 aa 20252131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 20245500 agaggtgcaagcattttaaaattggtggagacaagaagggcaagggaacgtctcttttct 20245559 Query: 374 aa 375 || Sbjct: 20245560 aa 20245561 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20240010 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20240069 Query: 374 aa 375 || Sbjct: 20240070 aa 20240071 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20233851 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20233910 Query: 374 aa 375 || Sbjct: 20233911 aa 20233912 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 20227283 agaggtgcaagcattttaaaattggtggagacaagaagggcaagggaacgtctcttttct 20227342 Query: 374 aa 375 || Sbjct: 20227343 aa 20227344 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20221793 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20221852 Query: 374 aa 375 || Sbjct: 20221853 aa 20221854 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20215634 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20215693 Query: 374 aa 375 || Sbjct: 20215694 aa 20215695 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 20204694 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 20204753 Query: 374 aa 375 || Sbjct: 20204754 aa 20204755 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20258067 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20258113 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20245343 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20245389 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20239849 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20239895 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20227126 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20227172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20221632 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20221678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20208903 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 20208949 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20251911 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 20251957 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20233692 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 20233738 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20215475 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 20215521 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 20204541 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 20204587
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 160075 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 160134 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 160135 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 160194 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 160195 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 160254 Query: 240 gg 241 || Sbjct: 160255 gg 160256 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 153909 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 153968 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 153969 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 154028 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 154029 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 154088 Query: 240 gg 241 || Sbjct: 154089 gg 154090 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141857 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 141916 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 141917 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 141976 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 141977 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 142036 Query: 240 gg 241 || Sbjct: 142037 gg 142038 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135690 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 135749 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 135750 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 135809 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 135810 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 135869 Query: 240 gg 241 || Sbjct: 135870 gg 135871 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123640 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 123699 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 123700 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 123759 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 123760 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 123819 Query: 240 gg 241 || Sbjct: 123820 gg 123821 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117473 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 117532 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 117533 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 117592 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 117593 ccgttatgaccgaaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 117652 Query: 240 gg 241 || Sbjct: 117653 gg 117654 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110909 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 110968 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 110969 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 111028 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 111029 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 111088 Query: 240 gg 241 || Sbjct: 111089 gg 111090 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106539 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 106598 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106599 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 106658 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 106659 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 106718 Query: 240 gg 241 || Sbjct: 106719 gg 106720 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 111448 agaggtgcaagcattttgaaattggtggagacaagaagggcaagggaacgtctcttttct 111507 Query: 374 aa 375 || Sbjct: 111508 aa 111509 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 160616 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 160675 Query: 374 aa 375 || Sbjct: 160676 aa 160677 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 154458 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 154517 Query: 374 aa 375 || Sbjct: 154518 aa 154519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 147888 agaggtgcaagcattttaaaattggtggagacaagaagggcaagggaacgtctcttttct 147947 Query: 374 aa 375 || Sbjct: 147948 aa 147949 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 142398 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 142457 Query: 374 aa 375 || Sbjct: 142458 aa 142459 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 136239 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 136298 Query: 374 aa 375 || Sbjct: 136299 aa 136300 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 129671 agaggtgcaagcattttaaaattggtggagacaagaagggcaagggaacgtctcttttct 129730 Query: 374 aa 375 || Sbjct: 129731 aa 129732 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 124181 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 124240 Query: 374 aa 375 || Sbjct: 124241 aa 124242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 118022 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 118081 Query: 374 aa 375 || Sbjct: 118082 aa 118083 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 107082 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 107141 Query: 374 aa 375 || Sbjct: 107142 aa 107143 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 160455 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 160501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 147731 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 147777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 142237 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 142283 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 129514 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 129560 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 124020 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 124066 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 111291 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 111337 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 154299 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 154345 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 136080 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 136126 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 117863 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 117909 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||| ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 106929 aagaagatcgtgctgaagctgcaatgccaaagctgcaagcattactc 106975
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 298 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 357 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 358 ccttcacaaggtcactcagtacaagaagggtaaggacagcctgtctgcccagggaaagcg 417 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 || |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 418 ccgttatgaccgtaagcagtcaggatatggtggtcagaccaagcctgttttccacaagaa 477 Query: 240 gg 241 || Sbjct: 478 gg 479 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 839 agaggtgcaagcatttcgagattggtggagacaagaagggcaagggaacatctcttttct 898 Query: 374 aa 375 || Sbjct: 899 aa 900 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 253 aagaagattgtgctgaagttgcagtgccagagctgcaagcactactc 299 |||||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 678 aagaagattgtgctgaagctgcaatgccaaagctgcaagcattactc 724
>gb|AY497301.1| Phalaenopsis hybrid cultivar 60S ribosomal protein L44 (PL44-1) mRNA, complete cds Length = 708 Score = 240 bits (121), Expect = 4e-60 Identities = 274/325 (84%) Strand = Plus / Plus Query: 52 gcagccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaag 111 ||||| ||||||||||| || || || ||||| ||||| ||||||||||| | |||| | Sbjct: 155 gcagcaatggtgaacgtcccaaaaacaaagaaaacctattgcaagaacaaacaatgcagg 214 Query: 112 aagcacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctcag 171 |||||||| || ||||| |||||||| || ||||||||||| || || || |||||||| Sbjct: 215 aagcacacgctgcacaaagttacccaatacaagaagggtaaagatagtctctctgctcaa 274 Query: 172 gggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttc 231 || || || || ||||| || ||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 275 ggaaaacgccgttatgatcggaagcagtctggttatgggggacagaccaagccagttttc 334 Query: 232 cacaagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaag 291 ||||| ||||| || || |||||||||||||| |||||| |||| || ||||| |||||| Sbjct: 335 cacaaaaaggcaaaaactacaaagaagattgttctgaagctgcaatgtcagagttgcaag 394 Query: 292 cactactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||| ||| || | || ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 395 cacttctctcagcacgccatcaagaggtgcaagcactttgagattggtggagacaagaag 454 Query: 352 ggcaagggaacatctctcttctaag 376 || |||||||||||||| ||||||| Sbjct: 455 gggaagggaacatctctgttctaag 479
>ref|NM_113242.1| Arabidopsis thaliana structural constituent of ribosome AT3G23390 mRNA, complete cds Length = 536 Score = 236 bits (119), Expect = 7e-59 Identities = 263/311 (84%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| |||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 53 atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 112 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||| Sbjct: 113 actttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaag 172 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 173 cgtcgttatgaccgtaaacaatctggttatggtggtcagactaagcctgtcttccacaaa 232 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || ||||||||||| ||| | | ||||| || ||||||||||||| Sbjct: 233 aaggctaagaccacgaagaagattgttttgaggcttcagtgtcaaagctgcaagcacttt 292 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || ||| ||||||||||||||||||| || || |||||||| ||||||||||| ||| Sbjct: 293 tcgcagcgtcctatcaagaggtgcaagcatttcgagatcggtggtgacaagaagggaaag 352 Query: 358 ggaacatctct 368 ||||||||||| Sbjct: 353 ggaacatctct 363
>gb|AY062855.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400; MLM24.12) mRNA, complete cds Length = 521 Score = 236 bits (119), Expect = 7e-59 Identities = 263/311 (84%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| |||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 51 atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 110 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||| Sbjct: 111 actttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaag 170 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 171 cgtcgttatgaccgtaaacaatctggttatggtggtcagactaagcctgtcttccacaaa 230 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || ||||||||||| ||| | | ||||| || ||||||||||||| Sbjct: 231 aaggctaagaccacgaagaagattgttttgaggcttcagtgtcaaagctgcaagcacttt 290 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || ||| ||||||||||||||||||| || || |||||||| ||||||||||| ||| Sbjct: 291 tcgcagcgtcctatcaagaggtgcaagcatttcgagatcggtggtgacaagaagggaaag 350 Query: 358 ggaacatctct 368 ||||||||||| Sbjct: 351 ggaacatctct 361
>gb|AY085174.1| Arabidopsis thaliana clone 13557 mRNA, complete sequence Length = 536 Score = 236 bits (119), Expect = 7e-59 Identities = 263/311 (84%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| |||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 53 atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 112 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||| Sbjct: 113 actttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaag 172 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 173 cgtcgttatgaccgtaaacaatctggttatggtggtcagactaagcctgtcttccacaaa 232 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || ||||||||||| ||| | | ||||| || ||||||||||||| Sbjct: 233 aaggctaagaccacgaagaagattgttttgaggcttcagtgtcaaagctgcaagcacttt 292 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || ||| ||||||||||||||||||| || || |||||||| ||||||||||| ||| Sbjct: 293 tcgcagcgtcctatcaagaggtgcaagcatttcgagatcggtggtgacaagaagggaaag 352 Query: 358 ggaacatctct 368 ||||||||||| Sbjct: 353 ggaacatctct 363
>gb|U64677.1|GHU64677 Gossypium hirsutum ribosomal protein L44 isoform a (RL44), complete cds Length = 455 Score = 236 bits (119), Expect = 7e-59 Identities = 269/319 (84%) Strand = Plus / Plus Query: 50 ccgcagccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgca 109 ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| Sbjct: 9 ccgcagccatggtgaacgtacctaagaccaagaagacctactgcaagagcaaggagtgca 68 Query: 110 agaagcacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctc 169 ||| ||||| | |||||||| || |||||||||||||| ||||| || | |||| | Sbjct: 69 ggaaacacactttgcacaaggtcacacagtataagaagggcaaggatagtttggctgcac 128 Query: 170 aggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttt 229 ||||||||||||| || ||||| || || || || || ||||| ||||| || || || | Sbjct: 129 aggggaagcgtcgttacgaccggaaacaatccggttacggtggtcagaccaaaccagtgt 188 Query: 230 tccacaagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgca 289 ||||||||||||| ||||| || |||||||||||||| | | |||| ||||| | |||| Sbjct: 189 tccacaagaaggcaaagaccaccaagaagattgtgctaaggctgcaatgccaaggttgca 248 Query: 290 agcactactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaaga 349 ||||| ||||||| | | ||||||||||||||||||||||| || ||||||||||||| Sbjct: 249 agcacgtttcacaacatccgatcaagaggtgcaagcactttgagattggtggagacaaga 308 Query: 350 agggcaagggaacatctct 368 |||| || ||||||||||| Sbjct: 309 aggggaaaggaacatctct 327
>gb|BT001193.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400) mRNA, complete cds Length = 365 Score = 236 bits (119), Expect = 7e-59 Identities = 263/311 (84%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||| |||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 1 atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 60 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||| Sbjct: 61 actttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaag 120 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 121 cgtcgttatgaccgtaaacaatctggttatggtggtcagactaagcctgtcttccacaaa 180 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| ||||| || ||||||||||| ||| | | ||||| || ||||||||||||| Sbjct: 181 aaggctaagaccacgaagaagattgttttgaggcttcagtgtcaaagctgcaagcacttt 240 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 || || ||| ||||||||||||||||||| || || |||||||| ||||||||||| ||| Sbjct: 241 tcgcagcgtcctatcaagaggtgcaagcatttcgagatcggtggtgacaagaagggaaag 300 Query: 358 ggaacatctct 368 ||||||||||| Sbjct: 301 ggaacatctct 311
>gb|U64678.1|GHU64678 Gossypium hirsutum ribosomal protein L44 isoform b (RL44), complete cds Length = 542 Score = 232 bits (117), Expect = 1e-57 Identities = 273/325 (84%) Strand = Plus / Plus Query: 50 ccgcagccatggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgca 109 ||||| ||||||||||||| || ||||| |||||||| || ||||||| ||||||||||| Sbjct: 39 ccgcaaccatggtgaacgtacctaagacgaagaagacttattgcaagagcaaggagtgca 98 Query: 110 agaagcacaccctccacaaggttacccagtataagaagggtaaggacagcctttctgctc 169 ||||||||| | ||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 99 ggaagcacactttgcacaaggttacacagtataagaagggtaaggatagtttggctgctc 158 Query: 170 aggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttt 229 | |||||||| || || || ||||| || || || |||||||| ||||| || || || | Sbjct: 159 aagggaagcgacgttacgatcgcaaacaatcaggttatggtggtcagaccaaaccagtct 218 Query: 230 tccacaagaaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgca 289 ||||||||||||| ||||| || |||||||||||||| | | |||| |||||| | || | Sbjct: 219 tccacaagaaggcaaagaccaccaagaagattgtgctaaggctgcaatgccagggttgta 278 Query: 290 agcactactcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaaga 349 |||| |||||| | | | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 279 agcatgtctcacagcatccgatcaagaggtgcaagcactttgaaattggtggagacaaga 338 Query: 350 agggcaagggaacatctctcttcta 374 |||| ||||||||||| || ||||| Sbjct: 339 aggggaagggaacatcacttttcta 363
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 218 bits (110), Expect = 2e-53 Identities = 164/182 (90%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 ||||||||| || || || |||||||| ||||| ||||||||||| |||| ||||||||| Sbjct: 103991 ggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcacac 104050 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 ||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 104051 cctacacaaggttacccagtacaagaaaggaaaggatagcctttctgctcaggggaagcg 104110 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 ||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 104111 tcgttatgaccgcaagcagtcaggatatggtgggcagacaaagcctgtttttcacaagaa 104170 Query: 240 gg 241 || Sbjct: 104171 gg 104172 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 104463 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacttcactcttct 104522 Query: 374 aagatgatgatcttgc 389 |||||| |||| |||| Sbjct: 104523 aagatgctgatattgc 104538 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 239 aggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactact 298 |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| Sbjct: 104283 aggccaagacaacaaagaagatcgttctgaagctgcagtgccagagctgcaagcactact 104342 Query: 299 c 299 | Sbjct: 104343 c 104343
>gb|M62396.1|YSAQLAG C.maltosa ribosomal protein L41 (LEL41) gene, complete cds Length = 515 Score = 200 bits (101), Expect = 4e-48 Identities = 254/305 (83%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| ||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 35 atggtgaacgttcccaagacaaagaagacctactgcaagtccaaggagtgcaaaaagcac 94 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 ||| | || ||||| || ||||| |||||||| || || ||| | |||||||||||||| Sbjct: 95 accttgcataaggtgacacagtacaagaaggggaaagatagcttggctgctcaggggaag 154 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| |||||| | || || || || |||||||| ||||| |||||||| |||||||| Sbjct: 155 cgtcgttatgacaggaaacaatcaggttatggtggtcagaccaagcctgtcttccacaaa 214 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagcactac 297 ||||| || || ||||||||||||||| ||| | |||||||||| ||||||| || Sbjct: 215 aaggctaaaaccacaaagaagattgtgttgaggctgcagtgccaaggctgcaaacatgtt 274 Query: 298 tcacaacgtgctatcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaag 357 ||||| | | ||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 275 tcacagcacccaatcaagaggtgcaagcattttgaaataggtggggacaagaaaggaaag 334 Query: 358 ggaac 362 ||||| Sbjct: 335 ggaac 339
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Minus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 ||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| || Sbjct: 1233 ggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcatac 1174 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 | | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||||| Sbjct: 1173 cttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaagcg 1114 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 ||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 1113 tcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaagaa 1054 Query: 240 gg 241 || Sbjct: 1053 gg 1052 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 746 agaggtgcaagcactttgagatcggtggagacaagaagggaaagggaacatctctctttt 687 Query: 374 aag 376 ||| Sbjct: 686 aag 684 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 239 aggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagca 293 |||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| Sbjct: 905 aggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagca 851
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Minus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 ||||||| ||||||| || ||||| || ||||||||||||||||||||||||||||| || Sbjct: 140673 ggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcatac 140614 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 | | |||||||| || ||||||||||| ||||| || |||||| |||| || || ||||| Sbjct: 140613 cttgcacaaggtgacgcagtataagaaaggtaaagatagccttgctgcccaaggaaagcg 140554 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 ||| ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 140553 tcgttatgatcgtaaacaatctggttatggaggtcagaccaagcccgtcttccacaagaa 140494 Query: 240 gg 241 || Sbjct: 140493 gg 140492 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttct 373 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 140186 agaggtgcaagcactttgagatcggtggagacaagaagggaaagggaacatctctctttt 140127 Query: 374 aag 376 ||| Sbjct: 140126 aag 140124 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 239 aggccaagacaacaaagaagattgtgctgaagttgcagtgccagagctgcaagca 293 |||| |||||||| |||||||||||||||| | | || ||||| ||||||||||| Sbjct: 140345 aggctaagacaactaagaagattgtgctgaggcttcaatgccaaagctgcaagca 140291
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24 Length = 87487 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 60 ggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 119 ||||||| |||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct: 48228 ggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcatac 48287 Query: 120 cctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcg 179 | |||||||||||||| || ||||||||||| ||||| ||| ||||||| || ||||| Sbjct: 48288 tttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaagcg 48347 Query: 180 tcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaa 239 ||| |||||||| || || ||||| |||||||| ||||| |||||||| |||||||| || Sbjct: 48348 tcgttatgaccgtaaacaatctggttatggtggtcagactaagcctgtcttccacaaaaa 48407 Query: 240 gg 241 || Sbjct: 48408 gg 48409 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 314 agaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctct 368 ||||||||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 48745 agaggtgcaagcatttcgagatcggtggtgacaagaagggaaagggaacatctct 48799
>gb|AF148853.2|AF148853 Leishmania amazonensis 60S ribosomal protein L44 (RPL44) mRNA, complete cds Length = 458 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 158 gcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccaga 217 |||||| ||||| || |||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 148 gcctttttgctcgcggtaagcgtcgttacgaccgcaagcagtctggttatggtggccaga 207 Query: 218 cgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctgaagttgcagt 277 | ||||| || |||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 208 ccaagcccgtcttccacaagaaggccaagacgaccaagaagattgtgctgaagctgcagt 267 Query: 278 gc 279 || Sbjct: 268 gc 269
>gb|DQ284457.1| Solanum tuberosum clone 014B12 ribosomal protein L41-like mRNA, complete cds Length = 547 Score = 137 bits (69), Expect = 5e-29 Identities = 186/225 (82%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 |||||||||||||| || || |||||||| ||||| ||| || |||||||| |||||| Sbjct: 53 atggtgaacgttccaaaaactaagaagacatactgtaagtcgaaagagtgcaaaaagcac 112 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 || || || || ||||| ||||| ||||| || || || || ||| | ||||| |||||| Sbjct: 113 actctgcataaagttacacagtacaagaaaggaaaagatagtcttgcagctcaagggaag 172 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| ||||| || ||||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 173 cgtcgttatgatcgtaagcagtctggttatggtgggcagactaaacccgtcttccacaag 232 Query: 238 aaggccaagacaacaaagaagattgtgctgaagttgcagtgccag 282 |||||||| || || |||||||||||||| | |||||| |||||| Sbjct: 233 aaggccaacactaccaagaagattgtgctaaggttgcaatgccag 277 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaagggaacatctctc 369 |||||||||||||||||||||||||| |||||||| |||||||| ||||||| |||||| Sbjct: 305 atcaagaggtgcaagcactttgaaattggtggagataagaagggacagggaacttctctc 364 Query: 370 ttctaag 376 || |||| Sbjct: 365 ttttaag 371
>ref|XM_567391.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNJ03120) partial mRNA Length = 455 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 85 acctactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagtataag 144 |||||||||||| |||| |||| ||||||||||| |||||||||||||||||| ||| Sbjct: 42 acctactgcaagggtaaggcttgcaggaagcacaccccccacaaggttacccagtacaag 101 Query: 145 aagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctgga 204 ||||| |||||| ||||| || || || ||||| || || ||||| ||||| || || Sbjct: 102 aagggcaaggactctctttccgcccaaggaaagcgacgatacgaccgaaagcaatccggt 161 Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 || ||||| ||||| |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 162 tacggtggtcagaccaagcctgtcttccacaagaaggctaagaccaccaagaaggttgt 220
>dbj|AK058830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-A07, full insert sequence Length = 355 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 262 gtgctgaagttgcagtgccagagctgcaagcactactcacaacgtgctatcaagaggtgc 321 ||||||||| |||| ||||| ||||||||||| ||||| || | | |||||||||||| Sbjct: 1 gtgctgaagctgcaatgccaaagctgcaagcattactcccagcaccccatcaagaggtgc 60 Query: 322 aagcactttgaaatcggtggagacaagaagggcaagggaacatctctcttctaa 375 ||||| || || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 61 aagcatttcgagattggtggagacaagaagggcaagggaacatctcttttctaa 114
>ref|XM_390357.1| Gibberella zeae PH-1 chromosome 1 RL44_PICJA 60S RIBOSOMAL PROTEIN L44 (L41) (FG10181.1) partial mRNA Length = 351 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 85 acctactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagtataag 144 |||||||||||| |||||||||| |||||||||| |||||||| |||||||| ||| Sbjct: 58 acctactgcaagggcaaggagtgccgcaagcacacccagcacaaggtcacccagtacaag 117 Query: 145 aagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctgga 204 || |||| | ||| | || ||||| |||||||| ||||||||||||||||| || Sbjct: 118 gctggaaaggcctccctgttcgcccagggtaagcgtcgatatgaccgcaagcagtccggt 177 Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 || ||||| ||||| ||||| || |||||||||||||||||||| || |||||| |||| Sbjct: 178 tacggtggtcagaccaagcccgtcttccacaagaaggccaagaccaccaagaaggttgt 236
>ref|XM_800942.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053506815.60) partial mRNA Length = 321 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 130 gaccgcaaacagtccggttatggcggtcagacgaagcccattttccacaagaaggccaag 189 Query: 247 acaacaaagaagattgtgctgaag 270 || |||||||||||||| |||||| Sbjct: 190 acgacaaagaagattgtcctgaag 213
>ref|XM_798924.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053509583.4) partial mRNA Length = 299 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 108 gaccgcaaacagtccggttatggcggtcagacgaagcccattttccacaagaaggccaag 167 Query: 247 acaacaaagaagattgtgctgaag 270 || |||||||||||||| |||||| Sbjct: 168 acgacaaagaagattgtcctgaag 191
>ref|XM_798949.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053503709.20) partial mRNA Length = 258 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || ||||| || ||||||||||| |||||||||||||||||||| Sbjct: 130 gaccgcaaacagtccggttatggcggtcagacgaagcccattttccacaagaaggccaag 189 Query: 247 acaacaaagaagattgtgctgaag 270 || |||||||||||||| |||||| Sbjct: 190 acgacaaagaagattgtcctgaag 213
>emb|AL117037.1|CNS01DN9 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 147 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 206 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 207 gttttccacaagaaagcaaagaccacaaagaaggttgtg 245
>emb|AL116729.1|CNS01DEP Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 155 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 214 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 215 gttttccacaagaaagcaaagaccacaaagaaggttgtg 253
>emb|AL115936.1|CNS01CSO Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 133 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 192 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 193 gttttccacaagaaagcaaagaccacaaagaaggttgtg 231
>emb|AL116457.1|CNS01D75 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 152 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 211 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 212 gttttccacaagaaagcaaagaccacaaagaaggttgtg 250
>emb|AL116390.1|CNS01D5A Botrytis cinerea strain T4 cDNA library Length = 636 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 148 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 207 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 208 gttttccacaagaaagcaaagaccacaaagaaggttgtg 246
>emb|AL115189.1|CNS01C7X Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 146 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 205 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 206 gttttccacaagaaagcaaagaccacaaagaaggttgtg 244
>emb|AL114130.1|CNS01BEI Botrytis cinerea strain T4 cDNA library Length = 840 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 116 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 175 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 176 gttttccacaagaaagcaaagaccacaaagaaggttgtg 214
>emb|AL113517.1|CNS01AXH Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 116 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 175 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 176 gttttccacaagaaagcaaagaccacaaagaaggttgtg 214
>emb|AL112901.1|CNS01AGD Botrytis cinerea strain T4 cDNA library Length = 516 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 134 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 193 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 194 gttttccacaagaaagcaaagaccacaaagaaggttgtg 232
>emb|AL112624.1|CNS01A8O Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 116 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 175 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 176 gttttccacaagaaagcaaagaccacaaagaaggttgtg 214
>emb|AL112342.1|CNS01A0U Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 149 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 208 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 209 gttttccacaagaaagcaaagaccacaaagaaggttgtg 247
>emb|AL111690.1|CNS019IQ Botrytis cinerea strain T4 cDNA library Length = 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 148 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 207 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 208 gttttccacaagaaagcaaagaccacaaagaaggttgtg 246
>emb|AL110700.1|CNS018R9 Botrytis cinerea strain T4 cDNA library Length = 480 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 104 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 163 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 164 gttttccacaagaaagcaaagaccacaaagaaggttgtg 202
>emb|AL111040.1|CNS0190P Botrytis cinerea strain T4 cDNA library Length = 518 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||| || || Sbjct: 116 gctcagggaaagcgtcgttatgaccgaaagcaatctggttatggtggtcagacaaaacca 175 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| || ||||| ||||||||| ||||| Sbjct: 176 gttttccacaagaaagcaaagaccacaaagaaggttgtg 214
>gb|U31912.1|CRU31912 Chlamydomonas reinhardtii ribosomal protein L41 (RPL41) mRNA, complete cds Length = 336 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| ||||| |||||||||||||| || || ||||| ||||| ||||| || Sbjct: 117 cagggcaagcgccgctacgaccgcaagcagtcgggttacggtggtcagaccaagcccgtc 176 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctg 267 |||||||||||||||||||| || |||||||| |||||| Sbjct: 177 ttccacaagaaggccaagaccaccaagaagatcgtgctg 215 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 319 tgcaagcactttgaaatcggtggagacaagaag 351 ||||||||||| || |||||||| ||||||||| Sbjct: 267 tgcaagcacttcgagatcggtggtgacaagaag 299 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaag 81 |||||||||||||| ||||||||| Sbjct: 12 atggtgaacgttcctaagaccaag 35
>ref|XM_537433.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a (LOC480311), mRNA Length = 481 Score = 89.7 bits (45), Expect = 1e-14 Identities = 120/145 (82%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||||| ||| ||||| ||| | ||| Sbjct: 144 cacaaagtgacccagtataagaagggcaaggattccctttatgcccagggaaagaggcgc 203 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 ||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||||| Sbjct: 204 tatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaaggct 263 Query: 244 aagacaacaaagaagattgtgctga 268 || || ||||||||||||||||||| Sbjct: 264 aaaaccacaaagaagattgtgctga 288
>ref|XM_368698.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00546.4) partial mRNA Length = 360 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || || |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct: 112 cagggaaagcgccgatacgaccgcaagcagtcaggatacggtggtcagaccaagcccgtc 171 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||||||||| ||||| || |||||||||||| Sbjct: 172 ttccacaagaaggcaaagaccaccaagaagattgtg 207 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 aaggagtgcaagaagcacacc 120 ||||||||||||||||||||| Sbjct: 43 aaggagtgcaagaagcacacc 63
>ref|XM_823312.1| Trypanosoma brucei TREU927 60S ribosomal protein L44 (Tb11.02.0740) partial mRNA Length = 321 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 ||||||||||| ||||||||||||||||| |||||||| ||||| ||||| | || ||| Sbjct: 118 aagcgtcgctacgaccgcaagcagtctggttatggtggtcagacaaagcccatctttcac 177 Query: 235 aagaaggccaagacaacaaagaagattgtgctgaag 270 || ||||| ||||| || ||||||||||| |||||| Sbjct: 178 aaaaaggcgaagacgaccaagaagattgttctgaag 213
>ref|XM_806327.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L44 (Tc00.1047053507105.40) partial mRNA Length = 321 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 130 gaccgcaaacagtccggttatggcggtcagacgaagcccattttccacaagaaggccaaa 189 Query: 247 acaacaaagaagattgtgctgaag 270 || |||||||||||||| |||||| Sbjct: 190 acgacaaagaagattgtcctgaag 213
>emb|X52122.1|TBRPL44 Trypanosoma brucei mRNA for ribosomal protein L44 Length = 443 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 ||||||||||| ||||||||||||||||| |||||||| ||||| ||||| | || ||| Sbjct: 157 aagcgtcgctacgaccgcaagcagtctggttatggtggtcagacaaagcccatctttcac 216 Query: 235 aagaaggccaagacaacaaagaagattgtgctgaag 270 || ||||| ||||| || ||||||||||| |||||| Sbjct: 217 aaaaaggcgaagacgaccaagaagattgttctgaag 252
>ref|XM_658693.1| Aspergillus nidulans FGSC A4 60S ribosomal protein L44 (AN6181.2), mRNA Length = 321 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||| |||||||| |||||| ||||| ||||||||| |||||||||| | |||||| Sbjct: 1 atggtcaacgttcccaagacccgcaagacgtactgcaagggcaaggagtgccacaagcac 60 Query: 118 accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaag 177 |||| |||||||| |||||||| ||| || |||| | ||| | || ||||| ||| Sbjct: 61 acccagcacaaggtcacccagtacaaggctggaaaggcctccctattcgcccagggtaag 120 Query: 178 cgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaag 237 ||||| || ||||| |||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 121 cgtcgttacgaccggaagcagagcggttacggtggtcagaccaagcccgtcttccacaag 180 Query: 238 aaggccaagacaacaaagaag 258 ||||||||||| || |||||| Sbjct: 181 aaggccaagaccaccaagaag 201
>ref|XM_420184.1| PREDICTED: Gallus gallus similar to large subunit ribosomal protein L36a (LOC422189), mRNA Length = 718 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 ||||| ||||||||||||||| | |||| |||||||||||||| ||||||||||||||| Sbjct: 167 tatggcggccagacgaagcctatcttccgtaagaaggccaagaccacaaagaagattgtg 226 Query: 265 ctga 268 |||| Sbjct: 227 ctga 230 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaag 351 ||||| ||||||||||||||| | || |||||||||||| Sbjct: 281 aagagatgcaagcactttgaactgggaggagacaagaag 319
>dbj|AB226038.1| Aspergillus oryzae cDNA, contig sequence: AoEST2894 Length = 1115 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| |||||||| |||||||| |||||| || |||||||| ||||| ||||| || Sbjct: 720 cagggtaagcgtcgttatgaccggaagcagagcggttatggtggtcagaccaagcccgtc 779 Query: 229 ttccacaagaaggccaagacaacaaagaagat 260 |||||||||||||||||||| || |||||||| Sbjct: 780 ttccacaagaaggccaagactaccaagaagat 811 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 84 gacctactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagta 140 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 568 gacctactgcaagggcaaggagtgcaagaagcacacccagcacaaggtcacccagta 624
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| |||||||| |||||||| |||||| || |||||||| ||||| ||||| || Sbjct: 2270580 cagggtaagcgtcgttatgaccggaagcagagcggttatggtggtcagaccaagcccgtc 2270639 Query: 229 ttccacaagaaggccaagacaacaaagaagat 260 |||||||||||||||||||| || |||||||| Sbjct: 2270640 ttccacaagaaggccaagactaccaagaagat 2270671 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 84 gacctactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagta 140 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2270428 gacctactgcaagggcaaggagtgcaagaagcacacccagcacaaggtcacccagta 2270484
>emb|CR406972.1| Gallus gallus finished cDNA, clone ChEST993g1 Length = 1083 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 ||||| ||||||||||||||| | |||| |||||||||||||| ||||||||||||||| Sbjct: 856 tatggcggccagacgaagcctatcttccgtaagaaggccaagaccacaaagaagattgtg 915 Query: 265 ctga 268 |||| Sbjct: 916 ctga 919 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaag 351 ||||| ||||||||||||||| | || |||||||||||| Sbjct: 970 aagagatgcaagcactttgaactgggaggagacaagaag 1008
>emb|CR390241.1| Gallus gallus finished cDNA, clone ChEST920d2 Length = 380 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 ||||| ||||||||||||||| | |||| |||||||||||||| ||||||||||||||| Sbjct: 153 tatggcggccagacgaagcctatcttccgtaagaaggccaagaccacaaagaagattgtg 212 Query: 265 ctga 268 |||| Sbjct: 213 ctga 216 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaag 351 ||||| ||||||||||||||| | || |||||||||||| Sbjct: 267 aagagatgcaagcactttgaactgggaggagacaagaag 305
>gb|DQ066246.1| Ixodes scapularis isolate ISN-L-86 ribosomal protein L44 mRNA, complete cds Length = 318 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 104 agtgcaagaagcacaccctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 44 agtgcaagaagcacaccctccacaaggtgacacagtataagaagggcaagga 95 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 |||||| | ||||||||||| || ||||| ||||||||||| |||||||| Sbjct: 250 atcaagcgctgcaagcacttcgagatcggcggagacaagaaacgcaaggga 300 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 238 aaggccaagacaacaaagaagattgtgctg 267 ||||||||||| || ||||||||||||||| Sbjct: 178 aaggccaagaccaccaagaagattgtgctg 207
>ref|XM_984357.1| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC632169), mRNA Length = 556 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 123 ccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcg 182 ||||||||| || |||||||||||||| |||||| | | ||| ||||| ||||| || Sbjct: 196 ccacaaggtgacacagtataagaagggcaaggactctttgtatgcccagggaaagcggcg 255 Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 ||||||| | || ||| ||| |||||||| ||||| |||||| |||||| ||| ||||| Sbjct: 256 ctatgacaggaaacagagtggctatggtgggcagactaagcctattttccgcaaaaaggc 315 Query: 243 caagacaacaaagaagattgtgctga 268 || || |||||||| |||||||||| Sbjct: 316 taaaactacaaagaaaattgtgctga 341
>ref|XM_907008.2| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC632169), mRNA Length = 556 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 123 ccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcg 182 ||||||||| || |||||||||||||| |||||| | | ||| ||||| ||||| || Sbjct: 196 ccacaaggtgacacagtataagaagggcaaggactctttgtatgcccagggaaagcggcg 255 Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 ||||||| | || ||| ||| |||||||| ||||| |||||| |||||| ||| ||||| Sbjct: 256 ctatgacaggaaacagagtggctatggtgggcagactaagcctattttccgcaaaaaggc 315 Query: 243 caagacaacaaagaagattgtgctga 268 || || |||||||| |||||||||| Sbjct: 316 taaaactacaaagaaaattgtgctga 341
>ref|XM_890670.2| PREDICTED: Mus musculus similar to large subunit ribosomal protein L36a (LOC624713), mRNA Length = 556 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 123 ccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcg 182 ||||||||| || |||||||||||||| |||||| | | ||| ||||| ||||| || Sbjct: 196 ccacaaggtgacacagtataagaagggcaaggactctttgtatgcccagggaaagcggcg 255 Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 ||||||| | || ||| ||| |||||||| ||||| |||||| |||||| ||| ||||| Sbjct: 256 ctatgacaggaaacagagtggctatggtgggcagactaagcctattttccgcaaaaaggc 315 Query: 243 caagacaacaaagaagattgtgctga 268 || || |||||||| |||||||||| Sbjct: 316 taaaactacaaagaaaattgtgctga 341
>gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, complete sequence Length = 183178 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Minus Query: 123 ccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcg 182 ||||||||| || |||||||||||||| |||||| | | ||| ||||| ||||| || Sbjct: 145156 ccacaaggtgacacagtataagaagggcaaggactctttgtatgcccagggaaagcggcg 145097 Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 ||||||| | || ||| ||| |||||||| ||||| |||||| |||||| ||| ||||| Sbjct: 145096 ctatgacaggaaacagagtggctatggtgggcagactaagcctattttccgcaaaaaggc 145037 Query: 243 caagacaacaaagaagattgtgctga 268 || || |||||||| |||||||||| Sbjct: 145036 taaaactacaaagaaaattgtgctga 145011
>ref|XM_959447.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41) (NCU00706.1) partial mRNA Length = 354 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| ||||| || || |||||||||||||| || || ||||| ||||| ||||| Sbjct: 109 gctcagggaaagcgccgttacgaccgcaagcagtccggttacggtggtcagaccaagccc 168 Query: 226 gttttccacaagaaggccaagacaacaaagaag 258 || |||||||||||||| ||||| || |||||| Sbjct: 169 gtcttccacaagaaggcgaagaccaccaagaag 201 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 112 aagcacaccctccacaaggttacccagta 140 |||||||||||||||||||| |||||||| Sbjct: 55 aagcacaccctccacaaggtcacccagta 83
>ref|XM_324885.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41) (NCU00706.1) partial mRNA Length = 354 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| ||||| || || |||||||||||||| || || ||||| ||||| ||||| Sbjct: 109 gctcagggaaagcgccgttacgaccgcaagcagtccggttacggtggtcagaccaagccc 168 Query: 226 gttttccacaagaaggccaagacaacaaagaag 258 || |||||||||||||| ||||| || |||||| Sbjct: 169 gtcttccacaagaaggcgaagaccaccaagaag 201 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 112 aagcacaccctccacaaggttacccagta 140 |||||||||||||||||||| |||||||| Sbjct: 55 aagcacaccctccacaaggtcacccagta 83
>gb|AF310257.1|AF310257 Trypanosoma cruzi chitin binding-like protein 3 (cblp3) mRNA, complete cds Length = 797 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 218 cgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctgaag 270 ||||||| |||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 632 cgaagcccattttccacaagaaggccaagacgacaaagaagattgtcctgaag 580
>gb|AY674230.1| Ixodes pacificus clone IP_7_60_92_138_CLU ribosomal protein L44 mRNA, complete cds Length = 318 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 104 agtgcaagaagcacaccctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||||||||||||||||| || ||||| |||||||| ||||| Sbjct: 44 agtgcaagaagcacaccctccacaaggtgacgcagtacaagaagggcaagga 95 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 |||||| | |||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 250 atcaagcgctgcaagcactttgagatcggcggagacaagaagcgcaaggga 300 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 238 aaggccaagacaacaaagaagattgtgctg 267 ||||||||||| || ||||||||||||||| Sbjct: 178 aaggccaagaccaccaagaagattgtgctg 207
>emb|AL646020.15| Mouse DNA sequence from clone RP23-74L9 on chromosome 11 Contains the gene for a novel histone H2A family member, a ribosomal protein L36a (Rpl36a) pseudogene, a SMT3 (supressor of mif two, 3) homolog (S. cerevisiae) (Smt3h) pseudogene, a ribosomal protein S15A (Rps15a) pseudogene, the Purb gene for purine rich element binding protein B, a novel gene and two CpG islands, complete sequence Length = 73838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||||||| ||||| || || ||||||||||||||| Sbjct: 23164 tatggtgggcagactaagcctattttccacaaaaaggctaaaactacaaagaagattgtg 23223 Query: 265 ctga 268 |||| Sbjct: 23224 ctga 23227
>ref|XM_521714.1| PREDICTED: Pan troglodytes similar to large subunit ribosomal protein L36a (LOC466314), mRNA Length = 357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||||||||| || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 106 caggggaagcggcgttatgacagaaagcagagtggctatggtgggcagactaagccgatt 165 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctg 267 ||||| || ||||| || || |||||||||||||||||| Sbjct: 166 ttccagaaaaaggctaaaactacaaagaagattgtgctg 204
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 106 tgcaagaagcacaccctccacaaggttacccagtataagaagggtaaggac 156 |||| ||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 967874 tgcaggaagcacaccccccacaaggttacccagtacaagaagggcaaggac 967924 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 208 ggtggccagacgaagcctgttttccacaagaaggccaagac 248 ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 968102 ggtggtcagaccaagcctgtcttccacaagaaggctaagac 968142
>gb|AF118148.1|AF118148 Filobasidiella neoformans ribosomal protein L41 gene, complete cds Length = 1702 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 106 tgcaagaagcacaccctccacaaggttacccagtataagaagggtaaggac 156 |||| ||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 1067 tgcaggaagcacaccccccacaaggttacccagtacaagaagggcaaggac 1117 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 208 ggtggccagacgaagcctgttttccacaagaaggccaagac 248 ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 1295 ggtggtcagaccaagcctgtcttccacaagaaggctaagac 1335
>gb|M19635.1|RATRPL36A Rattus norvegicus large subunit ribosomal protein L36a mRNA, complete cds Length = 444 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 106 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 165 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || ||||| |||||| ||| ||||| || ||||| ||||| |||| | ||||||||| Sbjct: 166 tacgaccggaagcagagtggctatggcgggcagacaaagccaatttttcgaaagaaggcc 225 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 226 aaaaccacaaagaagattgtgct 248
>ref|NM_001001.3| Homo sapiens ribosomal protein L36a-like (RPL36AL), mRNA Length = 549 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 224 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 283 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 284 gctaagaccacaaagaagattgtgct 309
>gb|BC070207.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:88188 IMAGE:4271403), complete cds Length = 542 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 213 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 272 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 273 gctaagaccacaaagaagattgtgct 298
>gb|BC000741.2| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:2225 IMAGE:3507009), complete cds Length = 536 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 211 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 270 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 271 gctaagaccacaaagaagattgtgct 296
>gb|BC003145.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:3918 IMAGE:2957923), complete cds Length = 518 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 204 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 263 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 264 gctaagaccacaaagaagattgtgct 289
>emb|AL109770.1|SPAC15E1 S.pombe chromosome I cosmid c15E1 Length = 12855 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 165 tgctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcc 224 ||||||||| |||||||| |||||||||||||| ||| | |||||| || || ||||| Sbjct: 2746 tgctcagggtaagcgtcgttatgaccgcaagcaaagtggttttggtggtcaaactaagcc 2805 Query: 225 tgttttccacaagaaggc 242 ||||||||||||||||| Sbjct: 2806 cgttttccacaagaaggc 2823
>emb|CR542166.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0624D for gene RPL36AL, ribosomal protein L36a-like; complete cds, incl. stopcodon Length = 321 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 118 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 177 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 178 gctaagaccacaaagaagattgtgct 203
>ref|NM_001019727.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC15E1.03), partial mRNA Length = 321 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 165 tgctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcc 224 ||||||||| |||||||| |||||||||||||| ||| | |||||| || || ||||| Sbjct: 108 tgctcagggtaagcgtcgttatgaccgcaagcaaagtggttttggtggtcaaactaagcc 167 Query: 225 tgttttccacaagaaggc 242 ||||||||||||||||| Sbjct: 168 cgttttccacaagaaggc 185
>emb|AL591767.2|CNS07EGK Human chromosome 14 DNA sequence BAC R-831F12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189410 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 332 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 273 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 272 gctaagaccacaaagaagattgtgct 247
>dbj|AB063609.1| Homo sapiens RPL36AL mRNA for ribosomal protein L36a-like, complete cds Length = 520 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 224 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 283 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 284 gctaagaccacaaagaagattgtgct 309
>gb|BC107716.1| Homo sapiens ribosomal protein L36a-like, mRNA (cDNA clone MGC:111574 IMAGE:6727975), complete cds Length = 565 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 238 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 297 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 298 gctaagaccacaaagaagattgtgct 323
>emb|AL139099.3|CNS01DX7 Human chromosome 14 DNA sequence BAC R-649E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157010 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 43646 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 43705 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 43706 gctaagaccacaaagaagattgtgct 43731
>gb|M15661.1|HUMRPZH21 Human ribosomal protein mRNA, complete cds Length = 386 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 181 cgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaag 240 |||||||| || |||||| ||| |||||||| ||||| ||||| |||||| |||||| Sbjct: 148 cgctatgatcggaagcagagtggctatggtgggcagacaaagccaattttccggaagaag 207 Query: 241 gccaagacaacaaagaagattgtgct 266 || ||||| ||||||||||||||||| Sbjct: 208 gctaagaccacaaagaagattgtgct 233
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || |||||||| |||||||| ||| |||||||||||||||| || Sbjct: 15901 gaccgcaaacagtccggttatggtggtcagacgaaacctattttccacaagaaggcgaaa 15960 Query: 247 acaacaaagaagattgt 263 || ||||| || ||||| Sbjct: 15961 acgacaaaaaaaattgt 15977
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || |||||||| |||||||| ||| |||||||||||||||| || Sbjct: 1099690 gaccgcaaacagtccggttatggtggtcagacgaaacctattttccacaagaaggcgaaa 1099749 Query: 247 acaacaaagaagattgt 263 || ||||| || ||||| Sbjct: 1099750 acgacaaaaaaaattgt 1099766
>ref|XM_946650.1| Trypanosoma brucei TREU927 60S ribosomal protein L44 (Tb927.2.6090) partial mRNA Length = 321 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || |||||||| |||||||| ||| |||||||||||||||| || Sbjct: 130 gaccgcaaacagtccggttatggtggtcagacgaaacctattttccacaagaaggcgaaa 189 Query: 247 acaacaaagaagattgt 263 || ||||| || ||||| Sbjct: 190 acgacaaaaaaaattgt 206
>ref|XM_750055.1| Aspergillus fumigatus Af293 ribosomal protein L41 (Afu2g08130) partial mRNA Length = 828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 88 tactgcaagaacaaggagtgcaagaagcacaccctccacaaggttacccagtataagaag 147 ||||||||| |||||||||| |||||||||| |||||||| |||||||| ||| Sbjct: 394 tactgcaagtccaaggagtgccgcaagcacacccagcacaaggtcacccagtacaaggct 453 Query: 148 ggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctggatat 207 || |||| | ||| | || ||||| |||||||| || |||||||||||| || || Sbjct: 454 ggcaaggcctccctgttcgcccagggtaagcgtcgttacgaccgcaagcagagcggttac 513 Query: 208 ggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagat 260 ||||| ||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 514 ggtggtcagaccaagcccgtcttccacaagaaggctaagaccaccaagaagat 566
>emb|AJ250726.2|TBR250726 Trypanosoma brucei HSP100 gene, GPI-PLC gene, beta prime COP gene, RPL44 gene, ORF1 (partial), ORF2, ORF3, ORF4, ORF5, ORF6 and ORF7 (partial), shorter allele Length = 24181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 187 gaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaag 246 |||||||| ||||| || |||||||| |||||||| ||| |||||||||||||||| || Sbjct: 20108 gaccgcaaacagtccggttatggtggtcagacgaaacctattttccacaagaaggcgaaa 20167 Query: 247 acaacaaagaagattgt 263 || ||||| || ||||| Sbjct: 20168 acgacaaaaaaaattgt 20184
>emb|AJ605265.1| Platichthys flesus partial mRNA for ribosomal protein L36A (rpl36A gene) Length = 321 Score = 65.9 bits (33), Expect = 1e-07 Identities = 166/208 (79%), Gaps = 8/208 (3%) Strand = Plus / Plus Query: 58 atggtgaacgttccgaagaccaagaagacctactgcaagaacaaggagtgcaagaagcac 117 ||||||||||| ||||||||| || ||||||||||||||| ||||||||||||| Sbjct: 1 atggtgaacgtcccgaagacccggaggacctactgcaagaa------gtgcaagaagcac 54 Query: 118 -accctccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaa 176 | |||| |||| || |||||||| |||||||| ||||| ||| | ||| ||||| || Sbjct: 55 cagcctc-acaaagtcacccagtacaagaaggggaaggattccctctttgcacagggtaa 113 Query: 177 gcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaa 236 | | | || ||| | |||||||| || ||||| || ||| | |||||| |||||| || Sbjct: 114 gaggagatacgacagaaagcagtccggctatgggggtcaggccaagcctattttccgaaa 173 Query: 237 gaaggccaagacaacaaagaagattgtg 264 |||||| ||||| ||||||||||||||| Sbjct: 174 gaaggctaagactacaaagaagattgtg 201 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactt 329 |||||||||||||||||||| Sbjct: 253 atcaagaggtgcaagcactt 272
>dbj|D67040.1|YSARPL41 Candida utilis DNA for ribosomal protein L41, complete cds Length = 2086 Score = 65.9 bits (33), Expect = 1e-07 Identities = 161/201 (80%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 64 aacgttccgaagaccaagaaga-cctactgcaagaacaaggagtgcaagaagcacaccct 122 |||||||| ||||||| ||||| ||||||| ||| |||||||||| |||||||| | Sbjct: 1484 aacgttccaaagacca-gaagaacctactgtaagggtaaggagtgcagaaagcacactca 1542 Query: 123 ccacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcg 182 ||||||||||||||||| ||| ||||||| ||| | ||| ||||| |||||||| Sbjct: 1543 acacaaggttacccagtacaaggctggtaaggcttccctctttgcccagggtaagcgtcg 1602 Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 |||||||| ||||| || || || ||||| || || ||||| ||||||||||| ||||| Sbjct: 1603 ttatgaccgtaagcaatccggttacggtggtcaaaccaagccagttttccacaaaaaggc 1662 Query: 243 caagacaacaaagaagattgt 263 || || || |||||| |||| Sbjct: 1663 taaaaccaccaagaaggttgt 1683
>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence Length = 200566 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 145926 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 145867 Query: 265 ctga 268 |||| Sbjct: 145866 ctga 145863
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 232838 tatggtgggcagactaagccttttttccgcaaaaaggctaaaactacaaagaagattgtg 232897 Query: 265 ctga 268 |||| Sbjct: 232898 ctga 232901
>gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 202316 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 79062 tatggtgggcagactaagccttttttccgcaaaaaggctaaaactacaaagaagattgtg 79121 Query: 265 ctga 268 |||| Sbjct: 79122 ctga 79125
>dbj|AK168535.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920030G04 product:ribosomal protein L36a, full insert sequence Length = 390 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 172 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 231 Query: 265 ctga 268 |||| Sbjct: 232 ctga 235
>dbj|AK170127.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630020E11 product:ribosomal protein L36a, full insert sequence Length = 454 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 174 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 233 Query: 265 ctga 268 |||| Sbjct: 234 ctga 237
>dbj|AK002540.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011G24 product:ribosomal protein L36a, full insert sequence Length = 392 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 174 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 233 Query: 265 ctga 268 |||| Sbjct: 234 ctga 237
>dbj|AK012502.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700067M10 product:ribosomal protein L44, full insert sequence Length = 457 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 175 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 234 Query: 265 ctga 268 |||| Sbjct: 235 ctga 238
>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence Length = 152012 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 133501 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 133442 Query: 265 ctga 268 |||| Sbjct: 133441 ctga 133438
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence Length = 199716 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 6128 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 6069 Query: 265 ctga 268 |||| Sbjct: 6068 ctga 6065
>gb|BC027515.1| Mus musculus ribosomal protein L36a, mRNA (cDNA clone MGC:41090 IMAGE:1383212), complete cds Length = 456 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 160 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 219 Query: 265 ctga 268 |||| Sbjct: 220 ctga 223
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| ||||||||| | || ||| ||| || ||||| ||||| |||||| || Sbjct: 28026 cagggaaagcggcgctatgacaggaaacagagtggctacggtgggcagaccaagcctatt 27967 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| ||| ||||| || || ||||||||||||||||||| Sbjct: 27966 ttccgcaaaaaggctaaaactacaaagaagattgtgctga 27927
>ref|NM_019865.2| Mus musculus ribosomal protein L36a (Rpl36a), mRNA Length = 457 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 175 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 234 Query: 265 ctga 268 |||| Sbjct: 235 ctga 238
>gb|BC086777.1| Mus musculus ribosomal protein L36a, mRNA (cDNA clone MGC:102057 IMAGE:6410876), complete cds Length = 447 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| ||| ||||| || || ||||||||||||||| Sbjct: 157 tatggtgggcagactaagcctattttccgcaaaaaggctaaaactacaaagaagattgtg 216 Query: 265 ctga 268 |||| Sbjct: 217 ctga 220
>ref|NM_025589.1| Mus musculus ribosomal protein L36a-like (Rpl36al), mRNA Length = 486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 150 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 209 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 210 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 269 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 270 aaaaccacaaagaagattgtgct 292
>gb|BC058142.1| Rattus norvegicus large subunit ribosomal protein L36a, mRNA (cDNA clone MGC:72794 IMAGE:6919511), complete cds Length = 523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 155 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 214 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || ||||| |||||| ||| ||||| || || || ||||| |||| | ||||||||| Sbjct: 215 tacgaccggaagcagagtggctatggcgggcaaacaaagccaatttttcgaaagaaggcc 274 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 275 aaaaccacaaagaagattgtgct 297
>gb|BC019810.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:30269 IMAGE:5148181), complete cds Length = 501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 144 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 203 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 204 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 263 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 264 aaaaccacaaagaagattgtgct 286
>ref|NM_031105.2| Rattus norvegicus large subunit ribosomal protein L36a (Rpl36a), mRNA Length = 507 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 152 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 211 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || ||||| |||||| ||| ||||| || || || ||||| |||| | ||||||||| Sbjct: 212 tacgaccggaagcagagtggctatggcgggcaaacaaagccaatttttcgaaagaaggcc 271 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 272 aaaaccacaaagaagattgtgct 294
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 91328 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 91269 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 91268 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 91209 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 91208 aaaaccacaaagaagattgtgct 91186
>ref|XM_538108.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a (LOC480987), mRNA Length = 777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| Sbjct: 436 gctcagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccg 495 Query: 226 gttttccacaagaaggccaagacaacaaagaagattgtgctga 268 | |||| || ||||| || || ||||||||||||||||||| Sbjct: 496 atcttccggaaaaaggctaaaactacaaagaagattgtgctga 538
>gb|AC015820.10| Homo sapiens chromosome 11, clone RP11-108G3, complete sequence Length = 165149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 136 cagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaag 195 |||||||||||||| ||||| | | | ||| ||||| ||| | |||||||| | ||| Sbjct: 39886 cagtataagaagggcaaggattccttgtatgcccagggaaagaggcgctatgatcagaag 39945 Query: 196 cagtctggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaag 255 ||| ||| |||||| | ||||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 39946 cagagtggctatggtaggcagacaaagccaattttccagaagaaggctaagaccacaaag 40005 Query: 256 aagattgtgct 266 ||||||||||| Sbjct: 40006 aagattgtgct 40016
>dbj|AK153544.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830174F05 product:ribosomal protein L36a-like, full insert sequence Length = 488 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 153 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 212 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 213 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 272 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 273 aaaaccacaaagaagattgtgct 295
>gb|BC081440.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:102023 IMAGE:6407930), complete cds Length = 501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 131 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 190 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 191 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 250 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 251 aaaaccacaaagaagattgtgct 273
>gb|AC080004.12| Homo sapiens 3q BAC RP11-307O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 206162 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 136 cagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaag 195 |||||||||||||| ||||| | | | ||| ||||| ||| | |||||||| | ||| Sbjct: 156868 cagtataagaagggcaaggattccttgtatgcccagggaaagaggcgctatgatcagaag 156809 Query: 196 cagtctggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaag 255 ||| ||| |||||| | ||||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 156808 cagagtggctatggtaggcagacaaagccaattttccagaagaaggctaagaccacaaag 156749 Query: 256 aagattgtgct 266 ||||||||||| Sbjct: 156748 aagattgtgct 156738
>dbj|AK010629.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410038A03 product:RIBOSOMAL PROTEIN L44 homolog [Homo sapiens], full insert sequence Length = 486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 150 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 209 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 210 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 269 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 270 aaaaccacaaagaagattgtgct 292
>dbj|AK003166.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001H08 product:RPL44 PROTEIN homolog [Mus musculus], full insert sequence Length = 473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 138 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 197 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 198 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 257 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 258 aaaaccacaaagaagattgtgct 280
>gb|BC058160.1| Homo sapiens ribosomal protein L36a pseudogene, mRNA (cDNA clone MGC:71312 IMAGE:6259908), complete cds Length = 505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 136 cagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaag 195 |||||||||||||| ||||| | | | ||| ||||| ||| | |||||||| | ||| Sbjct: 145 cagtataagaagggcaaggattccttgtatgcccagggaaagaggcgctatgatcagaag 204 Query: 196 cagtctggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaag 255 ||| ||| |||||| | ||||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 205 cagagtggctatggtaggcagacaaagccaattttccagaagaaggctaagaccacaaag 264 Query: 256 aagattgtgct 266 ||||||||||| Sbjct: 265 aagattgtgct 275
>ref|NG_005141.1| Homo sapiens ribosomal protein L36a pseudogene (LOC554234) on chromosome 11 Length = 702 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 136 cagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgctatgaccgcaag 195 |||||||||||||| ||||| | | | ||| ||||| ||| | |||||||| | ||| Sbjct: 245 cagtataagaagggcaaggattccttgtatgcccagggaaagaggcgctatgatcagaag 304 Query: 196 cagtctggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaag 255 ||| ||| |||||| | ||||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 305 cagagtggctatggtaggcagacaaagccaattttccagaagaaggctaagaccacaaag 364 Query: 256 aagattgtgct 266 ||||||||||| Sbjct: 365 aagattgtgct 375
>gb|BC081439.1| Mus musculus ribosomal protein L36a-like, mRNA (cDNA clone MGC:102022 IMAGE:5714114), complete cds Length = 474 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 114 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 173 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 174 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 233 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 234 aaaaccacaaagaagattgtgct 256
>gb|AF130727.1|AF130727 Chlamydomonas reinhardtii 80S ribosomal protein L41 (RPL41) gene, complete cds Length = 2940 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 175 aagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccac 234 ||||| ||||| |||||||||||||| || || ||||| ||||| ||||| || |||||| Sbjct: 798 aagcgccgctacgaccgcaagcagtcgggttacggtggtcagaccaagcccgtcttccac 857 Query: 235 aagaagg 241 ||||||| Sbjct: 858 aagaagg 864 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 319 tgcaagcactttgaaatcggtggagacaagaag 351 ||||||||||| || |||||||| ||||||||| Sbjct: 2605 tgcaagcacttcgagatcggtggtgacaagaag 2637
>gb|BC022706.1| Mus musculus, clone IMAGE:4485773, mRNA Length = 1311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 946 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 1005 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || || ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 1006 tacgatcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 1065 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 1066 aaaaccacaaagaagattgtgct 1088
>gb|AF401592.1| Ictalurus punctatus ribosomal protein L36a mRNA, complete cds Length = 412 Score = 61.9 bits (31), Expect = 2e-06 Identities = 138/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 99 caaggagtgcaagaagcac-accctccacaaggttacccagtataagaagggtaaggaca 157 |||| |||||||||||||| | |||| |||| || ||||||||||||||||| |||||| Sbjct: 75 caagaagtgcaagaagcaccagcctc-acaaagtcacccagtataagaagggaaaggact 133 Query: 158 gcctttctgctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccaga 217 ||| | ||| ||||| ||| | || || ||| | |||||| || || || ||||||| Sbjct: 134 ccctgtatgcccagggtaagaggcgatacgacagaaagcagagcggctacggaggccaga 193 Query: 218 cgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||||||| | |||| || |||||||| || ||||||||||| ||||||| Sbjct: 194 cgaagcctatattccggaaaaaggccaaaaccacaaagaagatcgtgctga 244
>gb|AF004672.1|AF004672 Xanthophyllomyces dendrorhous ribosomal protein L41 (L41) gene, complete cds Length = 2552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 128 aggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgctatg 187 |||| |||||||| |||||||| |||||| | | | || ||||| ||||| || || | Sbjct: 1465 aggtgacccagtacaagaagggaaaggactccatcttcgcccagggaaagcgacgatacg 1524 Query: 188 accgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggccaaga 247 |||| |||||||| || || || || ||||| ||||| ||||||||||||||||| |||| Sbjct: 1525 accgaaagcagtccggttacggaggtcagaccaagcccgttttccacaagaaggctaaga 1584 Query: 248 caacaaagaag 258 | || |||||| Sbjct: 1585 ccaccaagaag 1595
>emb|CR859457.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0912 (from clone DKFZp469D0912) Length = 609 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| ||||| |||||| |||||||| ||||| ||||||||||||||| Sbjct: 232 tatggtgggcagacaaagccaattttccggaagaaggctaagaccacaaagaagattgtg 291 Query: 265 ct 266 || Sbjct: 292 ct 293
>ref|XM_500485.1| Yarrowia lipolytica CLIB122, YALI0B04224g predicted mRNA Length = 321 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| ||||| || || ||||| |||||||| || || || || ||||| |||| Sbjct: 109 gctcagggtaagcgacgatacgaccgaaagcagtccggttacggaggtcagaccaagcag 168 Query: 226 gttttccacaagaaggccaagacaacaaagaag 258 |||||||||||||||||||||| || |||||| Sbjct: 169 attttccacaagaaggccaagaccaccaagaag 201
>ref|NM_213917.1| Sus scrofa ribosomal protein 36A (RPL36A), mRNA Length = 488 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| ||||| ||| | ||| Sbjct: 131 cacaaagtgacccagtataagaagggcaaggattccctctatgcccagggaaagaggcgc 190 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 ||||| || || ||| ||| ||||| || || || ||||| |||||| |||||||| Sbjct: 191 tatgatcggaaacagagtggctatggcgggcaaacaaagccaattttccggaagaaggct 250 Query: 244 aagacaacaaagaagattgtgctga 268 || || ||||||||||||||||||| Sbjct: 251 aaaaccacaaagaagattgtgctga 275
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 166 gctcaggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcct 225 |||||||| ||||| || || ||||| |||||||| || || || || ||||| |||| Sbjct: 561480 gctcagggtaagcgacgatacgaccgaaagcagtccggttacggaggtcagaccaagcag 561539 Query: 226 gttttccacaagaaggccaagacaacaaagaag 258 |||||||||||||||||||||| || |||||| Sbjct: 561540 attttccacaagaaggccaagaccaccaagaag 561572
>emb|Y09537.1|SSNAGATII Sus scrofa gene encoding beta-1,2-N-acetylglucosaminyltransferase II Length = 5018 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| ||||| ||| | ||| Sbjct: 719 cacaaagtgacccagtataagaagggcaaggattccctctatgcccagggaaagaggcgc 660 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 ||||| || || ||| ||| ||||| || || || ||||| |||||| |||||||| Sbjct: 659 tatgatcggaaacagagtggctatggcgggcaaacaaagccaattttccggaagaaggct 600 Query: 244 aagacaacaaagaagattgtgctga 268 || || ||||||||||||||||||| Sbjct: 599 aaaaccacaaagaagattgtgctga 575
>dbj|AB021315.1| Coprinus cinereus genes for tRNA-Thr and L41 ribosomal protein, complete cds Length = 1611 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || || ||||| |||||||| || |||||||| ||||| ||||| || Sbjct: 1141 cagggaaagcgacgttacgaccgaaagcagtccggttatggtggtcagaccaagcccgtc 1200 Query: 229 ttccacaagaagg 241 ||||||||||||| Sbjct: 1201 ttccacaagaagg 1213
>dbj|AB000910.1| Sus scrofa mRNA for ribosomal protein, complete cds Length = 488 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| ||||| ||| | ||| Sbjct: 131 cacaaagtgacccagtataagaagggcaaggattccctctatgcccagggaaagaggcgc 190 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 ||||| || || ||| ||| ||||| || || || ||||| |||||| |||||||| Sbjct: 191 tatgatcggaaacagagtggctatggcgggcaaacaaagccaattttccggaagaaggct 250 Query: 244 aagacaacaaagaagattgtgctga 268 || || ||||||||||||||||||| Sbjct: 251 aaaaccacaaagaagattgtgctga 275
>ref|XM_852206.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 5 (LOC475808), mRNA Length = 425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| | Sbjct: 137 cagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccgatc 196 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 197 ttccggaaaaaggctaaaactacaaagaagattgtgctga 236
>ref|XM_852164.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 4 (LOC475808), mRNA Length = 417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| | Sbjct: 137 cagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccgatc 196 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 197 ttccggaaaaaggctaaaactacaaagaagattgtgctga 236
>ref|XM_852126.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 3 (LOC475808), mRNA Length = 418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| | Sbjct: 137 cagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccgatc 196 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 197 ttccggaaaaaggctaaaactacaaagaagattgtgctga 236
>ref|XM_533017.2| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 1 (LOC475808), mRNA Length = 421 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| | Sbjct: 137 cagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccgatc 196 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 197 ttccggaaaaaggctaaaactacaaagaagattgtgctga 236
>ref|XM_843720.1| PREDICTED: Canis familiaris similar to large subunit ribosomal protein L36a, transcript variant 2 (LOC475808), mRNA Length = 428 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||||| |||||| ||| |||||||| ||||| ||||| | Sbjct: 137 cagggaaagcggcgttatgaccggaagcagagtggctatggtgggcagactaagccgatc 196 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 197 ttccggaaaaaggctaaaactacaaagaagattgtgctga 236
>ref|XM_446620.1| Candida glabrata CBS138, CAGL0G05940g partial mRNA Length = 378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 |||||||| ||||| ||||| | ||||| || || |||||||||||||||||||| || Sbjct: 184 tatgaccgtaagcaatctggtttcggtggtcaaactaagcctgttttccacaagaaagct 243 Query: 244 aagacaacaaagaagattgt 263 ||||| || |||||| |||| Sbjct: 244 aagactaccaagaaggttgt 263
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 |||||||| ||||| ||||| | ||||| || || |||||||||||||||||||| || Sbjct: 572640 tatgaccgtaagcaatctggtttcggtggtcaaactaagcctgttttccacaagaaagct 572699 Query: 244 aagacaacaaagaagattgt 263 ||||| || |||||| |||| Sbjct: 572700 aagactaccaagaaggttgt 572719
>dbj|AK157158.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830205H16 product:dystrobrevin, beta, full insert sequence Length = 3686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| | | ||||| || || ||||||||||||||| Sbjct: 3131 tatggtgggcagaccaagcctattttccgctaaaaggctaaaactacaaagaagattgtg 3072 Query: 265 ctga 268 |||| Sbjct: 3071 ctga 3068
>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence Length = 198927 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| | | ||||| || || ||||||||||||||| Sbjct: 171298 tatggtgggcagaccaagcctattttccgctaaaaggctaaaactacaaagaagattgtg 171239 Query: 265 ctga 268 |||| Sbjct: 171238 ctga 171235
>gb|AC034247.4|AC034247 Homo sapiens chromosome 5 clone RP11-343P16, complete sequence Length = 171482 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 |||||| || |||||| ||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 109880 ctatgatcggaagcagagtggctatggtgggcagacaaagccaattttctggaagaaggc 109939 Query: 243 caagacaacaaagaagattgtgct 266 ||||| ||||||||||||||||| Sbjct: 109940 taagaccacaaagaagattgtgct 109963
>dbj|AB000425.2| Sus scrofa genes for endopeptidase 24.16 type M1, endopeptidase 24.16 type M2, endopeptidase 24.16 type M3, ribosomal protein retropseudogene(pseudo), complete cds Length = 8180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 6577 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcagactaagccaatt 6518 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 6517 ttccggaaaaaggctaaaactacaaagaagattgtgctga 6478
>gb|AC026753.5|AC026753 Homo sapiens chromosome 5 clone RP11-72L14, complete sequence Length = 148491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 183 ctatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggc 242 |||||| || |||||| ||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 80062 ctatgatcggaagcagagtggctatggtgggcagacaaagccaattttctggaagaaggc 80121 Query: 243 caagacaacaaagaagattgtgct 266 ||||| ||||||||||||||||| Sbjct: 80122 taagaccacaaagaagattgtgct 80145
>ref|NM_214359.1| Sus scrofa soluble angiotesin-binding protein (NLN), mRNA Length = 4825 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 3222 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcagactaagccaatt 3163 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 3162 ttccggaaaaaggctaaaactacaaagaagattgtgctga 3123
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| |||||| | | ||||| || || ||||||||||||||| Sbjct: 221212 tatggtgggcagaccaagcctattttccgctaaaaggctaaaactacaaagaagattgtg 221271 Query: 265 ctga 268 |||| Sbjct: 221272 ctga 221275
>dbj|D11336.1|PIGSABP Sus scrofa mRNA for soluble angiotesin-binding protein, complete cds Length = 3819 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 3207 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcagactaagccaatt 3148 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 3147 ttccggaaaaaggctaaaactacaaagaagattgtgctga 3108
>gb|BC078555.1| Xenopus laevis MGC85428 protein, mRNA (cDNA clone MGC:85428 IMAGE:6934581), complete cds Length = 427 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 172 tatggtggccagaccaagccaattttcagaaagaaggctaagaccacaaagaagattgt 230
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 54.0 bits (27), Expect = 6e-04 Identities = 114/143 (79%) Strand = Plus / Minus Query: 124 cacaaggttacccagtataagaagggtaaggacagcctttctgctcaggggaagcgtcgc 183 ||||| || ||||||||||||||||| ||||| ||| | ||| || || ||||| ||| Sbjct: 112206 cacaaagtgacccagtataagaagggcaaggattccctgtatgcccaaggaaagcggcgc 112147 Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 || | ||||||||| ||| || ||||| ||||| ||||| | || | ||||||||| Sbjct: 112146 tacggtcgcaagcagagtggctacggtgggcagacaaagccaatctttcgaaagaaggcc 112087 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 112086 aaaaccacaaagaagattgtgct 112064
>ref|XM_751917.1| Ustilago maydis 521 hypothetical protein (UM00863.1) partial mRNA Length = 1101 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 208 ggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaag 258 ||||| ||||| ||||| || |||||||||||||||||||| || |||||| Sbjct: 931 ggtggtcagaccaagcccgtcttccacaagaaggccaagaccaccaagaag 981
>ref|XM_938903.1| PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC649839), mRNA Length = 383 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||||||| | || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 106 caggggaagtggcgttatgacaggaagcagagtggctatggtgggcagactaagccgatt 165 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctg 267 |||| || ||||| || || |||||||||||||||||| Sbjct: 166 ttccggaaaaaggctaaaactacaaagaagattgtgctg 204
>gb|AC139143.5| Homo sapiens chromosome 11, clone CTD-3008O6, complete sequence Length = 55001 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||||||| | || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 52025 caggggaagtggcgttatgacaggaagcagagtggctatggtgggcagactaagccgatt 51966 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctg 267 |||| || ||||| || || |||||||||||||||||| Sbjct: 51965 ttccggaaaaaggctaaaactacaaagaagattgtgctg 51927
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||||||| | || |||||| | |||||| ||| |||||||| ||||| ||||| || Sbjct: 14682 caggggaagtggcgttatgacaggaagcagagtggctatggtgggcagactaagccgatt 14623 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctg 267 |||| || ||||| || || |||||||||||||||||| Sbjct: 14622 ttccggaaaaaggctaaaactacaaagaagattgtgctg 14584
>dbj|D10577.1|YSARIMC Candida maltosa RIM-C gene for ribosomal protein L41, complete cds Length = 1141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 199 tctggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaag 258 ||||| |||||||| || || |||| |||||||| |||||||| || || || |||||| Sbjct: 502 tctgggtatggtggtcaaacaaagcaagttttccataagaaggctaaaacgactaagaag 561 Query: 259 attgtgctgaagttg 273 |||||| |||||||| Sbjct: 562 attgtgttgaagttg 576
>gb|DQ216135.1| Taeniopygia guttata clone 0058P0024G08 ribosomal protein L36A-like mRNA, complete sequence Length = 415 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgtgctga 268 |||||||||||||| || |||||||||||||||| Sbjct: 191 aagaaggccaagaccaccaagaagattgtgctga 224 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||||||||||||||| | || |||||||||||| Sbjct: 275 aagaggtgcaagcactttgagctgggaggagacaagaag 313
>emb|AM049154.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 311 tcaagaggtgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 ||||||||||||||||||| ||| | || ||||||||||| |||||||| Sbjct: 248 tcaagaggtgcaagcacttcgaacttggaggagacaagaaacgcaaggga 297
>ref|XM_968530.1| PREDICTED: Tribolium castaneum similar to CG7424-PA (LOC662436), mRNA Length = 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 319 tgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 ||||||||||||||| | ||||| ||||||||| |||||||| Sbjct: 298 tgcaagcactttgaattgggtggcgacaagaagcgcaaggga 339
>gb|AF526255.1| Chlamys farreri clone iolscfcl357ct373cn393 ribosomal protein L44 mRNA, complete cds Length = 382 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 104 agtgcaagaagcacaccctccacaaggttacccagtataaga 145 ||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 56 agtgcaagaagcataccctccacaaagtcacccagtacaaga 97
>ref|NM_135335.2| Drosophila melanogaster Ribosomal protein L36A CG7424-RA (RpL36A), mRNA Length = 469 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgtgctg 267 |||||||||||||| || ||||||||||||||| Sbjct: 203 aagaaggccaagaccaccaagaagattgtgctg 235
>gb|BT024261.1| Drosophila melanogaster IP15820 full insert cDNA Length = 511 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgtgctg 267 |||||||||||||| || ||||||||||||||| Sbjct: 224 aagaaggccaagaccaccaagaagattgtgctg 256
>ref|XM_344962.2| PREDICTED: Rattus norvegicus similar to IL-27 p28 subunit (LOC365368), mRNA Length = 1236 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 208 ggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctg 267 ||||| ||||| ||||| |||||||||| |||| || || |||||||||||||||||| Sbjct: 157 ggtgggcagactaagcccattttccacaaaaaggataaaactacaaagaagattgtgctg 216 Query: 268 a 268 | Sbjct: 217 a 217
>gb|M62395.1|YSRQLAF Pichia sp. ribosomal protein L41 gene, complete cds Length = 1048 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 ||||| |||||||||||||| |||||||| || |||||| ||||| Sbjct: 901 aagcccgttttccacaagaaagccaagactaccaagaaggttgtg 945
>dbj|D10153.1|YSRPGL41 Pichia guilliermondii PGL41 gene for ribosomal protein L41, partial cds Length = 1048 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 ||||| |||||||||||||| |||||||| || |||||| ||||| Sbjct: 901 aagcccgttttccacaagaaagccaagactaccaagaaggttgtg 945
>gb|AY769307.1| Bombyx mori ribosomal protein L36A (RpL36A) mRNA, complete cds Length = 397 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 ||||| |||||||||||||| ||||||| ||||||||| | |||||| Sbjct: 271 aagagatgcaagcactttgagctcggtggtgacaagaagagaaaggga 318
>ref|XM_864389.1| PREDICTED: Bos taurus similar to large subunit ribosomal protein L36a (LOC613520), mRNA Length = 386 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| ||||| ||||||| || ||||| || || |||||||||||||| Sbjct: 152 tatggtgggcagactaagccagttttccggaaaaaggctaaaactacaaagaagattgta 211 Query: 265 ctga 268 |||| Sbjct: 212 ctga 215
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| ||||| ||| | ||| || || ||||||||||||||| Sbjct: 57330 tatggtgggcagactaagcctattttctgcaaaatggctaaaactacaaagaagattgtg 57271 Query: 265 ctga 268 |||| Sbjct: 57270 ctga 57267
>emb|Z50109.1|CEC09H10 Caenorhabditis elegans Cosmid C09H10, complete sequence Length = 40453 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 112 aagcacaccctccacaaggttacccagtataagaagggtaagga 155 ||||||||| ||||||||||||||| || |||||||| ||||| Sbjct: 25613 aagcacaccaaccacaaggttacccaatacaagaagggaaagga 25570
>emb|AM049158.1| Scarabaeus laticollis mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaagggcaaggga 360 |||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 250 aagaggtgcaagcactttgagttgggtggygacaagaaacgcaaggga 297
>ref|XM_773573.1| Giardia lamblia ATCC 50803 ribosomal protein L44 (GLP_158_62913_63233) partial mRNA Length = 321 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 207 tggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaag 258 |||||| ||||| ||||| | |||| || |||||||||||||||||||||| Sbjct: 144 tggtggtcagaccaagcccatcttccgcaggaaggccaagacaacaaagaag 195
>emb|X92517.1|SCORFSC14 S.cerevisiae PSD1, N1696, SKO1, N1706, N1710, N1714, N1718, SCL41A, N1727, YGP1, N1735, N1739, N1743, N1747, N1751, YCK2, N1761, N1765, RPC31, N1773, N1774, N1777, N1780, N1785, N1790 genes Length = 36813 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 14848 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 14891
>ref|NM_063974.4| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-41) (rpl-41) mRNA, complete cds Length = 374 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 aagcacaccctccacaaggttacccagtataagaagggtaagga 155 ||||||||| ||||||||||||||| || |||||||| ||||| Sbjct: 57 aagcacaccaaccacaaggttacccaatacaagaagggaaagga 100
>gb|AF304121.1|AF304121 Caenorhabditis elegans 60S ribosomal protein L44 L41 (2L388) mRNA, complete cds Length = 371 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 aagcacaccctccacaaggttacccagtataagaagggtaagga 155 ||||||||| ||||||||||||||| || |||||||| ||||| Sbjct: 57 aagcacaccaaccacaaggttacccaatacaagaagggaaagga 100
>emb|Z71438.1|SCYNL162W S.cerevisiae chromosome XIV reading frame ORF YNL162w Length = 2523 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 1923 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 1966
>gb|DQ331962.1| Synthetic construct Saccharomyces cerevisiae clone FLH201068.01X RPL42B gene, complete sequence Length = 762 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 604 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 647
>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence Length = 207307 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| ||||| ||| | ||| || || ||||||||||||||| Sbjct: 16169 tatggtgggcagactaagcctattttctgcaaaatggctaaaactacaaagaagattgtg 16228 Query: 265 ctga 268 |||| Sbjct: 16229 ctga 16232
>gb|AY610296.1| Sus scrofa clone rcsk24_h11.y1.abd, mRNA sequence Length = 435 Score = 48.1 bits (24), Expect = 0.034 Identities = 81/100 (81%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| ||||| || || || Sbjct: 129 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcagactaaaccaatt 188 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgctga 268 |||| || ||||| || || ||||||||||||||||||| Sbjct: 189 ttccggaaaaaggctaaaactacaaagaagattgtgctga 228
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| ||||| |||||| ||||| ||| | ||| || || ||||||||||||||| Sbjct: 110751 tatggtgggcagactaagcctattttctgcaaaatggctaaaactacaaagaagattgtg 110692 Query: 265 ctga 268 |||| Sbjct: 110691 ctga 110688
>gb|U10398.3|YSCH9315 Saccharomyces cerevisiae chromosome VIII cosmid 9315 Length = 30351 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 28946 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 28903
>dbj|D10579.1|YSCSCL41B Saccharomyces cerevisiae SCL41b gene for ribosomal protein L41b, complete cds Length = 1823 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 832 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 875
>dbj|D10578.1|YSCSCL41A Saccharomyces cerevisiae SCL41a gene for ribosomal protein L41a, complete cds Length = 1975 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 220 aagcctgttttccacaagaaggccaagacaacaaagaagattgt 263 |||||||||||||||||||| || ||||| || |||||| |||| Sbjct: 1054 aagcctgttttccacaagaaagctaagactaccaagaaggttgt 1097
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190042 Score = 46.1 bits (23), Expect = 0.13 Identities = 54/63 (85%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 207 tggtggccagacgaagcctgttttccacaagaaggcc-aagacaacaaagaagattgtgc 265 |||||| ||||| |||||| |||||||||| ||||| || || ||| |||||||||||| Sbjct: 188724 tggtgggcagactaagcctattttccacaaaaaggcttaaaactacatagaagattgtgc 188665 Query: 266 tga 268 ||| Sbjct: 188664 tga 188662
>gb|AC183538.4| Pan troglodytes BAC clone CH251-395P17 from chromosome x, complete sequence Length = 186120 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 |||||| | |||||| ||| |||||||| ||||| ||||| |||||| || ||||| Sbjct: 124526 tatgacaggaagcagagtggctatggtgggcagactaagccgattttccggaaaaaggct 124585 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 124586 aaaactacaaagaagattgtgct 124608
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland Research Institute) complete sequence Length = 227741 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 214 cagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 ||||| ||||| |||||| ||| ||||| || || ||||||||||||||||||| Sbjct: 189124 cagactaagcccattttccgcaaaaaggctaaaactacaaagaagattgtgctga 189178
>ref|XM_792463.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7424-PA (LOC592965), partial mRNA Length = 258 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 202 ggatatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagatt 261 |||||||| || ||||| || ||| | |||| |||||||||||||| || ||||||||| Sbjct: 103 ggatatggaggacagaccaaacctatcttccgaaagaaggccaagaccaccaagaagatt 162 Query: 262 gtgctga 268 || |||| Sbjct: 163 gtactga 169
>gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, complete sequence Length = 187064 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 184 tatgaccgcaagcagtctggatatggtggccagacgaagcctgttttccacaagaaggcc 243 |||||| | |||||| ||| |||||||| ||||| ||||| |||||| || ||||| Sbjct: 76674 tatgacaggaagcagagtggctatggtgggcagactaagccgattttccggaaaaaggct 76733 Query: 244 aagacaacaaagaagattgtgct 266 || || ||||||||||||||||| Sbjct: 76734 aaaactacaaagaagattgtgct 76756
>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence Length = 175834 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 238 aaggccaagacaacaaagaagattgtgctgaagtt 272 |||||||| || ||||||||||||||||| ||||| Sbjct: 42983 aaggccaaaactacaaagaagattgtgctaaagtt 43017
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 214 cagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 ||||| ||||| |||||| ||| ||||| || || ||||||||||||||||||| Sbjct: 170580 cagactaagcccattttccgcaaaaaggctaaaactacaaagaagattgtgctga 170526
>ref|XM_214958.1| PREDICTED: Rattus norvegicus ribosomal protein L36a (predicted) (Rpl36a_predicted), mRNA Length = 631 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 214 cagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 ||||| ||||| |||||| ||| ||||| || || ||||||||||||||||||| Sbjct: 163 cagactaagcccattttccgcaaaaaggctaaaactacaaagaagattgtgctga 217
>ref|XM_343925.1| PREDICTED: Rattus norvegicus similar to large subunit ribosomal protein L36a (LOC363636), mRNA Length = 321 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 214 cagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 ||||| ||||| |||||| ||| ||||| || || ||||||||||||||||||| Sbjct: 151 cagactaagcccattttccgcaaaaaggctaaaactacaaagaagattgtgctga 205
>ref|XM_574947.1| PREDICTED: Rattus norvegicus similar to large subunit ribosomal protein L36a (LOC499622), mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 214 cagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtgctga 268 ||||| ||||| |||||| ||| ||||| || || ||||||||||||||||||| Sbjct: 171 cagactaagcccattttccgcaaaaaggctaaaactacaaagaagattgtgctga 225
>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete sequence Length = 243510 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 aatgtattatctttaaatttctg 453 ||||||||||||||||||||||| Sbjct: 72681 aatgtattatctttaaatttctg 72703
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 46.1 bits (23), Expect = 0.13 Identities = 54/63 (85%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 207 tggtggccagacgaagcctgttttccacaagaaggcc-aagacaacaaagaagattgtgc 265 |||||| ||||| |||||| |||||||||| ||||| || || ||| |||||||||||| Sbjct: 141676 tggtgggcagactaagcctattttccacaaaaaggcttaaaactacatagaagattgtgc 141617 Query: 266 tga 268 ||| Sbjct: 141616 tga 141614
>emb|X04345.1|DMSUF4 Drosophila suffix sequence from gene CG208 Length = 535 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 111 gaaggccaagaccaccaagaagattgtgctg 141
>emb|X04344.1|DMSUF3 Drosophila suffix sequence from gene AG208 Length = 744 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 8 gaaggccaagaccaccaagaagattgtgctg 38
>emb|X04342.1|DMSUF1 Drosophila mRNA (C-terminal) with suffix sequence (C208) Length = 377 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 149 gaaggccaagaccaccaagaagattgtgctg 179
>gb|M54973.1|DROSUFFIXD Drosophila melanogaster CG208 gene, suffix sequence Length = 535 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 111 gaaggccaagaccaccaagaagattgtgctg 141
>gb|M54972.1|DROSUFFIXC Drosophila melanogaster AG208 gene, suffix sequence Length = 744 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 8 gaaggccaagaccaccaagaagattgtgctg 38
>gb|M54970.1|DROSUFFIXA Drosophila melanogaster (clone C208) suffix sequence mRNA Length = 377 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 gaaggccaagacaacaaagaagattgtgctg 267 |||||||||||| || ||||||||||||||| Sbjct: 149 gaaggccaagaccaccaagaagattgtgctg 179
>gb|AY305871.1| Homo sapiens migration-inducing protein 6 (MIG6) mRNA, complete cds Length = 827 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 526 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 585 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 586 ttccggaaaaaggctaaaactacaaagaagattgtgct 623
>ref|XM_521180.1| PREDICTED: Pan troglodytes similar to large subunit ribosomal protein L36a (LOC465760), mRNA Length = 526 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 262 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 321 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 322 ttccggaaaaaggctaaaactacaaagaagattgtgct 359
>ref|NM_021029.4| Homo sapiens ribosomal protein L36a (RPL36A), mRNA Length = 469 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 190 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 249 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 250 ttccggaaaaaggctaaaactacaaagaagattgtgct 287
>gb|AC162037.2| Mus musculus chromosome 8, clone RP23-35K23, complete sequence Length = 241548 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 atctttaaatttctggttataa 460 |||||||||||||||||||||| Sbjct: 26635 atctttaaatttctggttataa 26656
>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0008E02, complete sequence Length = 152974 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 tccaccgccgcttccgcagccatggt 62 |||||| ||||||||||||||||||| Sbjct: 6905 tccacctccgcttccgcagccatggt 6880
>gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0031M14, complete sequence Length = 49269 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 tccaccgccgcttccgcagccatggt 62 |||||| ||||||||||||||||||| Sbjct: 2122 tccacctccgcttccgcagccatggt 2147
>gb|BC070204.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:88185 IMAGE:4774945), complete cds Length = 425 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 135 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 194 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 195 ttccggaaaaaggctaaaactacaaagaagattgtgct 232
>gb|BC031015.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:32772 IMAGE:4659712), complete cds Length = 429 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 138 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 197 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 198 ttccggaaaaaggctaaaactacaaagaagattgtgct 235
>gb|BC001781.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:2064 IMAGE:3353669), complete cds Length = 425 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 146 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 205 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 206 ttccggaaaaaggctaaaactacaaagaagattgtgct 243
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence Length = 159753 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 cacaaggttacccagtataagaaggg 149 ||||| |||||||||||||||||||| Sbjct: 129584 cacaaagttacccagtataagaaggg 129609
>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete sequence Length = 163417 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| |||| ||||| ||||||| || ||||| || || ||||||||||||||| Sbjct: 154077 tatggtggggagactaagccaattttccagaaaaaggctaaaactacaaagaagattgtg 154018 Query: 265 ct 266 || Sbjct: 154017 ct 154016
>emb|AM049152.1| Curculio glandium mRNA for ribosomal protein L44e (rpL44e gene) Length = 315 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 313 aagaggtgcaagcactttgaaatcggtggagacaagaa 350 ||||||||||||||||||||| | || || |||||||| Sbjct: 250 aagaggtgcaagcactttgaacttggaggtgacaagaa 287
>gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, complete sequence Length = 189143 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 181090 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 181149 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 181150 ttccggaaaaaggctaaaactacaaagaagattgtgct 181187
>gb|AC004938.3| Homo sapiens PAC clone RP5-971C3 from 7, complete sequence Length = 88029 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Plus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| |||| ||||| ||||||| || ||||| || || ||||||||||||||| Sbjct: 78003 tatggtggggagactaagccaattttccagaaaaaggctaaaactacaaagaagattgtg 78062 Query: 265 ct 266 || Sbjct: 78063 ct 78064
>ref|NM_001005095.1| Xenopus tropicalis ribosomal protein L36A (MGC89834), mRNA Length = 414 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||| ||||||||||||||| | || || ||||||||| Sbjct: 278 atcaagagatgcaagcactttgaattgggaggggacaagaag 319 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgt 263 |||||||| ||||| |||||||||||||| Sbjct: 197 aagaaggctaagaccacaaagaagattgt 225
>gb|BC077026.1| Xenopus tropicalis ribosomal protein L36A, mRNA (cDNA clone MGC:89834 IMAGE:7028718), complete cds Length = 414 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||| ||||||||||||||| | || || ||||||||| Sbjct: 278 atcaagagatgcaagcactttgaattgggaggggacaagaag 319 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgt 263 |||||||| ||||| |||||||||||||| Sbjct: 197 aagaaggctaagaccacaaagaagattgt 225
>emb|CR617894.1| full-length cDNA clone CS0DI062YC10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 366 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 104 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 163 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 164 ttccggaaaaaggctaaaactacaaagaagattgtgct 201
>emb|CR612724.1| full-length cDNA clone CS0DC001YE07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 355 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 93 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 152 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 153 ttccggaaaaaggctaaaactacaaagaagattgtgct 190
>emb|CR611948.1| full-length cDNA clone CS0DD002YK13 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 390 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 128 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 187 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 188 ttccggaaaaaggctaaaactacaaagaagattgtgct 225
>ref|XM_929985.1| PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC644889), mRNA Length = 490 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 201 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 260 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 261 ttccggaaaaaggctaaaactacaaagaagattgtgct 298
>gb|DQ317826.1| Palola sp. AS-2005 isolate Kosrae161 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 608 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 ggagacaagaagggcaagggaa 361 |||||||||||||||||||||| Sbjct: 248 ggagacaagaagggcaagggaa 227
>emb|CR542198.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0924D for gene RPL36A, ribosomal protein L36a; complete cds, without stopcodon Length = 318 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 106 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 165 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 166 ttccggaaaaaggctaaaactacaaagaagattgtgct 203
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 tccaccgccgcttccgcagccatggt 62 |||||| ||||||||||||||||||| Sbjct: 9316504 tccacctccgcttccgcagccatggt 9316479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgccgtcgtcgtctccggtc 38 |||||||||||||||||||| Sbjct: 25593370 cgccgtcgtcgtctccggtc 25593389
>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete sequence Length = 186687 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Minus Query: 205 tatggtggccagacgaagcctgttttccacaagaaggccaagacaacaaagaagattgtg 264 |||||||| |||| ||||| ||||||| || ||||| || || ||||||||||||||| Sbjct: 41292 tatggtggggagactaagccaattttccagaaaaaggctaaaactacaaagaagattgtg 41233 Query: 265 ct 266 || Sbjct: 41232 ct 41231
>gb|BC062219.1| Homo sapiens ribosomal protein L36a, mRNA (cDNA clone MGC:72020 IMAGE:6726961), complete cds Length = 456 Score = 44.1 bits (22), Expect = 0.53 Identities = 79/98 (80%) Strand = Plus / Plus Query: 169 caggggaagcgtcgctatgaccgcaagcagtctggatatggtggccagacgaagcctgtt 228 ||||| ||||| || |||||| | |||||| ||| |||||||| || || ||||| || Sbjct: 171 cagggaaagcggcgttatgacaggaagcagagtggctatggtgggcaaactaagccgatt 230 Query: 229 ttccacaagaaggccaagacaacaaagaagattgtgct 266 |||| || ||||| || || ||||||||||||||||| Sbjct: 231 ttccggaaaaaggctaaaactacaaagaagattgtgct 268
>gb|AC016791.23| Mus musculus chromosome 19, clone RP23-187B17, complete sequence Length = 172942 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 cacaaggttacccagtataagaaggg 149 ||||| |||||||||||||||||||| Sbjct: 132251 cacaaagttacccagtataagaaggg 132226
>gb|AC120162.6| Mus musculus chromosome 8, clone RP24-456M18, complete sequence Length = 190755 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 atctttaaatttctggttataa 460 |||||||||||||||||||||| Sbjct: 71120 atctttaaatttctggttataa 71141
>emb|CR942739.2| Xenopus tropicalis finished cDNA, clone TNeu070k14 Length = 490 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||| ||||||||||||||| | || || ||||||||| Sbjct: 267 atcaagagatgcaagcactttgaattgggaggggacaagaag 308 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgt 263 |||||||| ||||| |||||||||||||| Sbjct: 186 aagaaggctaagaccacaaagaagattgt 214
>emb|CR926212.1| Xenopus tropicalis finished cDNA, clone TNeu141f09 Length = 372 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 310 atcaagaggtgcaagcactttgaaatcggtggagacaagaag 351 |||||||| ||||||||||||||| | || || ||||||||| Sbjct: 256 atcaagagatgcaagcactttgaattgggaggggacaagaag 297 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgt 263 |||||||| ||||| |||||||||||||| Sbjct: 175 aagaaggctaagaccacaaagaagattgt 203
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 tccaccgccgcttccgcagccatggt 62 |||||| ||||||||||||||||||| Sbjct: 9388201 tccacctccgcttccgcagccatggt 9388176 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgccgtcgtcgtctccggtc 38 |||||||||||||||||||| Sbjct: 25912040 cgccgtcgtcgtctccggtc 25912059
>emb|AL935164.6| Zebrafish DNA sequence from clone CH211-190N9, complete sequence Length = 170403 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 431 aatgtattatctttaaatttct 452 |||||||||||||||||||||| Sbjct: 118760 aatgtattatctttaaatttct 118781
>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4, complete sequence Length = 203345 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atctttaaatttctggttata 459 ||||||||||||||||||||| Sbjct: 157514 atctttaaatttctggttata 157494
>ref|NM_001039590.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 3, mRNA Length = 12401 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atctttaaatttctggttata 459 ||||||||||||||||||||| Sbjct: 11113 atctttaaatttctggttata 11093
>ref|NM_001039591.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA Length = 12353 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atctttaaatttctggttata 459 ||||||||||||||||||||| Sbjct: 11065 atctttaaatttctggttata 11045
>gb|AF301237.4| Homo sapiens chromosome 8 clone CTD-2547A9 map q13.3, complete sequence Length = 169842 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 cattttgttttgcaatttgtg 548 ||||||||||||||||||||| Sbjct: 15246 cattttgttttgcaatttgtg 15226
>ref|XM_743928.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu7g04890) partial mRNA Length = 2112 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 ttgttttgcaattgtgtcgac 500 ||||||||||||||||||||| Sbjct: 759 ttgttttgcaattgtgtcgac 739
>emb|CR734924.2|CNS0GTUJ Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120
>emb|CR734774.2|CNS0GTQD Tetraodon nigroviridis full-length cDNA Length = 356 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 17 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 68
>emb|CR734401.2|CNS0GTG0 Tetraodon nigroviridis full-length cDNA Length = 405 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 66 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 117
>emb|CR711846.2|CNS0GC7M Tetraodon nigroviridis full-length cDNA Length = 409 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 70 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 121
>emb|CR711825.2|CNS0GC71 Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120
>emb|CR711728.2|CNS0GC4C Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120
>emb|CR723114.2|CNS0GKWG Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120
>gb|AY231644.1| Drosophila yakuba clone yak-em_CG7424 mRNA sequence Length = 309 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 235 aagaaggccaagacaacaaagaagattgtgctg 267 |||||||| ||||| || ||||||||||||||| Sbjct: 169 aagaaggctaagaccaccaagaagattgtgctg 201
>emb|CR720742.2|CNS0GJ2K Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120
>emb|CR718507.2|CNS0GHCH Tetraodon nigroviridis full-length cDNA Length = 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 101 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 152
>emb|CR718486.2|CNS0GHBW Tetraodon nigroviridis full-length cDNA Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/53 (88%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 104 agtgcaagaagcac-accctccacaaggttacccagtataagaagggtaagga 155 |||||||||||||| | |||| |||| ||||||||||| |||||||| ||||| Sbjct: 69 agtgcaagaagcaccaacctc-acaaagttacccagtacaagaagggaaagga 120 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,828,697 Number of Sequences: 3902068 Number of extensions: 5828697 Number of successful extensions: 128055 Number of sequences better than 10.0: 398 Number of HSP's better than 10.0 without gapping: 396 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 126671 Number of HSP's gapped (non-prelim): 1286 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
