Clone Name | baak4i20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VITA2_XENLA (P18709) Vitellogenin A2 precursor (VTG A2) [Contain... | 29 | 2.7 | 2 | LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor | 29 | 2.7 | 3 | AMPR_YEREN (P45461) HTH-type transcriptional activator ampR | 28 | 4.6 | 4 | ABCA_AERSA (Q07698) ABC transporter protein abcA | 28 | 7.9 |
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>VITA2_XENLA (P18709) Vitellogenin A2 precursor (VTG A2) [Contains: Lipovitellin| I; Lipovitellin II; Phosvitin] Length = 1807 Score = 29.3 bits (64), Expect = 2.7 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Frame = -2 Query: 282 FFDTNSVFYFSTRGTEHRGNCDSNRLFFRRSRGYELTIEST-----HVYQYHGQSILAIL 118 F+D N T+GTEHRG+ R S E + S+ H ++ G +L Sbjct: 1287 FYDLNFRRTARTKGTEHRGS--------RLSSSSESSSSSSESAYRHKAKFLGDKEPPVL 1338 Query: 117 FDSREAFQAENTISGRYVLVSQQFTHXQKIQ 25 + +A + +NT G ++V Q++ H K Q Sbjct: 1339 VVTFKAVRNDNTKQGYQMVVYQEY-HSSKQQ 1368
>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor| Length = 226 Score = 29.3 bits (64), Expect = 2.7 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Frame = +3 Query: 54 G*RVHTYRRWCFPPEMPP*SQREL---------QECSAHDTDIHALI 167 G R+HT+ R FP PP QR L E H +DI A+I Sbjct: 172 GRRLHTWNRIVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAII 218
>AMPR_YEREN (P45461) HTH-type transcriptional activator ampR| Length = 294 Score = 28.5 bits (62), Expect = 4.6 Identities = 21/55 (38%), Positives = 27/55 (49%) Frame = -2 Query: 273 TNSVFYFSTRGTEHRGNCDSNRLFFRRSRGYELTIESTHVYQYHGQSILAILFDS 109 T++ + E R NC RLF R SRG LT E G+++L IL DS Sbjct: 33 THAAISQQVKALEQRLNC---RLFIRISRGLVLTTE--------GENLLPILNDS 76
>ABCA_AERSA (Q07698) ABC transporter protein abcA| Length = 308 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 49 LLADEYIPTGDGVFRLKCLPRVKENCKNALPMILI 153 L+ DE + GD F+ KC R+K+ + ++L+ Sbjct: 167 LIIDEALAVGDDAFQRKCYARLKQLQSQGVTILLV 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,780,599 Number of Sequences: 219361 Number of extensions: 599564 Number of successful extensions: 1455 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1455 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)