>emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene
             SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3
             gene for PTMA (prothymosin, alpha) pseudogene 3, the 3'
             end of the ZNF339 gene for zinc finger protein 339 and two
             CpG islands, complete sequence
          Length = 139953

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 94    ctgaaatgcctccctagagtca 115
             ||||||||||||||||||||||
Sbjct: 40228 ctgaaatgcctccctagagtca 40207

>gb|AC091722.3| Sus scrofa clone RP44-304F21, complete sequence
          Length = 165604

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    cacaatttcctctgtgctctg 239
              |||||||||||||||||||||
Sbjct: 116204 cacaatttcctctgtgctctg 116224

>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete
             sequence
          Length = 194715

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   tgagaagtaaaagacactgtt 270
             |||||||||||||||||||||
Sbjct: 73574 tgagaagtaaaagacactgtt 73594

>emb|BX545910.6| Mouse DNA sequence from clone RP23-459D6 on chromosome X, complete
            sequence
          Length = 92382

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  tgagaagtaaaagacactgtt 270
            |||||||||||||||||||||
Sbjct: 6186 tgagaagtaaaagacactgtt 6206

>gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chromosome 2, complete
              sequence
          Length = 166804

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    atgctctgcccatgatactg 150
              ||||||||||||||||||||
Sbjct: 161592 atgctctgcccatgatactg 161611

>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    agtcaaagagaattgcaaga 130
              ||||||||||||||||||||
Sbjct: 520929 agtcaaagagaattgcaaga 520910

>gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosome 13, complete
             sequence
          Length = 176871

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ctgtgctctgttccccttgt 249
             ||||||||||||||||||||
Sbjct: 80516 ctgtgctctgttccccttgt 80535

>gb|AC122316.3| Mus musculus BAC clone RP23-303G23 from 1, complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tctgttagaatcacaatttc 227
              ||||||||||||||||||||
Sbjct: 170184 tctgttagaatcacaatttc 170165

>gb|AC069542.7| Homo sapiens chromosome 10 clone RP11-390B4, complete sequence
          Length = 166509

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaagagaattgcaagaatgc 134
             ||||||||||||||||||||
Sbjct: 63387 aaagagaattgcaagaatgc 63368

>gb|AC099727.13| Mus musculus chromosome 1, clone RP23-353O3, complete sequence
          Length = 222408

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tctgttagaatcacaatttc 227
              ||||||||||||||||||||
Sbjct: 143075 tctgttagaatcacaatttc 143056

>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence
          Length = 192263

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    cctccctagagtcaaagaga 121
              ||||||||||||||||||||
Sbjct: 164291 cctccctagagtcaaagaga 164272

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 100      tgcctccctagagtcaaagagaat 123
                ||||||||||||||| ||||||||
Sbjct: 21487345 tgcctccctagagtcgaagagaat 21487368

>gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complete sequence
          Length = 180973

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    aatttcctctgtgctctgtt 241
              ||||||||||||||||||||
Sbjct: 176904 aatttcctctgtgctctgtt 176923

>gb|AC104651.2| Homo sapiens BAC clone RP11-217P16 from 2, complete sequence
          Length = 106954

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   atgctctgcccatgatactg 150
             ||||||||||||||||||||
Sbjct: 86012 atgctctgcccatgatactg 86031

>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   tgcctccctagagtcaaagagaat 123
             ||||||||||||||| ||||||||
Sbjct: 82272 tgcctccctagagtcgaagagaat 82295

>gb|AC136454.4| Mus musculus BAC clone RP24-340J10 from 8, complete sequence
          Length = 172160

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ttccccttgttgagaagtaa 259
              ||||||||||||||||||||
Sbjct: 149855 ttccccttgttgagaagtaa 149836


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,124,769
Number of Sequences: 3902068
Number of extensions: 2124769
Number of successful extensions: 35856
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35819
Number of HSP's gapped (non-prelim): 37
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)