>SHH_CHICK (Q91035) Sonic hedgehog protein precursor (SHH) [Contains: Sonic|
           hedgehog protein N-product; Sonic hedgehog protein
           C-product]
          Length = 425

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 14  ACVCDDGANTLRCGDARSLHWKRQKLYKIGSTV 112
           A +C DGA          +HW  + LY+IGS V
Sbjct: 377 AALCPDGAIPTAATTTTGIHWYSRLLYRIGSWV 409

>SYW_RABIT (P23612) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 475

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 336 EAYKPKCPLGGSTP-SRGNPPSLLDEPD 256
           E YK  CP G STP S G+P ++ D+ D
Sbjct: 60  EDYKADCPPGNSTPDSHGDPEAVDDKED 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,354,956
Number of Sequences: 219361
Number of extensions: 1497673
Number of successful extensions: 2973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)