ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4i02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR4K3_HUMAN (Q96R72) Olfactory receptor 4K3 33 0.45
2ZG67_XENLA (P18734) Gastrula zinc finger protein XLCGF67.1 (Frag... 32 0.59
3OR4KF_HUMAN (Q8NH41) Olfactory receptor 4K15 31 1.7
4ZN546_HUMAN (Q86UE3) Zinc finger protein 546 31 1.7
5MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4 (... 30 2.9
6OR4L1_HUMAN (Q8NH43) Olfactory receptor 4L1 (Olfactory receptor ... 29 5.0
7GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related z... 29 6.6
8STT7_CHLRE (Q84V18) Serine/threonine-protein kinase stt7, chloro... 29 6.6
9ZG16_XENLA (P18712) Gastrula zinc finger protein XLCGF16.1 (Frag... 28 8.6
10VP2_AHSV6 (O71024) Outer capsid protein VP2 28 8.6
11YL37_CAEEL (P34428) Hypothetical protein F44B9.7 28 8.6
12GUTR1_DROME (Q9NDM2) Gustatory receptor trehalose 1 (Trehalose r... 28 8.6

>OR4K3_HUMAN (Q96R72) Olfactory receptor 4K3|
          Length = 315

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
 Frame = +3

Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 392
           ILSW  G  H + QLA++ NL F             P+++  +C+ ++ +   + +    
Sbjct: 146 ILSWIVGIFHALSQLAFTVNLPFCGPNEVDSFFCDLPLVIKLACVDTYILGVFMISTSGM 205

Query: 393 V-LELYLLLIFGHRVFLALV 449
           + L  ++LL+  + + L  V
Sbjct: 206 IALVCFILLVISYTIILVTV 225



to top

>ZG67_XENLA (P18734) Gastrula zinc finger protein XLCGF67.1 (Fragment)|
          Length = 139

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF 337
           +CG +FL+R H ++HL T   +KP     C +CF
Sbjct: 37  ECGKSFLSRSHLNTHLRTHTGEKPYSCSECGKCF 70



to top

>OR4KF_HUMAN (Q8NH41) Olfactory receptor 4K15|
          Length = 324

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
 Frame = +3

Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 392
           ++SW  G IH   QLA++ NL F             P++   +CI ++ +   +      
Sbjct: 146 LISWFVGFIHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGF 205

Query: 393 V-LELYLLLIFGHRVFLALV 449
           + L  +LLL+  + V L  V
Sbjct: 206 LSLSSFLLLVVSYTVILVTV 225



to top

>ZN546_HUMAN (Q86UE3) Zinc finger protein 546|
          Length = 836

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ---SMEPYE 388
           +CG TF +R+H + H      +KP +   C + F L  E   H +     +PYE
Sbjct: 501 ECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYE 554



to top

>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4|
           (Membrane-associated RING-CH protein IV) (MARCH-IV)
           (RING finger protein 174)
          Length = 410

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 180 LRWW*WCAVASYVCLWLRLTADILSWHDGTIHPICQLAYS 299
           L WW WC  + + C  L   A  +  H G +   C++ ++
Sbjct: 8   LLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFN 47



to top

>OR4L1_HUMAN (Q8NH43) Olfactory receptor 4L1 (Olfactory receptor OR14-28)|
          Length = 312

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
 Frame = +3

Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAI-MTNLWNRMN 389
           ILSW  G +H I Q+  + NL F             P+++  +CI ++ + +  + +   
Sbjct: 146 ILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETYTLELFVIADSGL 205

Query: 390 TVLELYLLLIFGHRVFLALV*KK 458
                ++LL+  + V L  V KK
Sbjct: 206 LSFTCFILLLVSYIVILVSVPKK 228



to top

>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc finger|
           protein 4) (HKR4 protein)
          Length = 376

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ 370
           DCG  F  R H   HL T   +KP    AC + F    +   H +
Sbjct: 327 DCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQR 371



to top

>STT7_CHLRE (Q84V18) Serine/threonine-protein kinase stt7, chloroplast|
           precursor (EC 2.7.11.1)
          Length = 754

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -3

Query: 413 QQIKLQNSVHTVP*IGHDSKTPDTTKSNDNRPTK-VQVSGISELTDGMNGAIVPRKYI-- 243
           Q ++   + H+V  +  D K  +   S  ++  K + +   ++L  G+N   VP +Y+  
Sbjct: 285 QLVQAVAACHSVGIVHRDIKPANCIVSERDKKIKLIDLGAAADLRIGIN--YVPNEYLLD 342

Query: 242 -RSQPQPKTNIASYSTPSPPPQ 180
            R  P P+  I S  TP PPP+
Sbjct: 343 PRYAP-PQQYIMSTQTPKPPPK 363



to top

>ZG16_XENLA (P18712) Gastrula zinc finger protein XLCGF16.1 (Fragment)|
          Length = 112

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF 337
           +CG  F  R H +SH  T   +K  L  AC +CF
Sbjct: 66  ECGKCFSRRSHLNSHHKTHTGEKSFLCFACGKCF 99



to top

>VP2_AHSV6 (O71024) Outer capsid protein VP2|
          Length = 1051

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 338 KSNDNRPTKVQVSGISELTDGMNGAI 261
           + N+N+P KVQ+ G+S LT    G +
Sbjct: 400 QGNNNKPLKVQIDGVSILTSEKYGTV 425



to top

>YL37_CAEEL (P34428) Hypothetical protein F44B9.7|
          Length = 466

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 320 PTKVQVSGISELTDGMNGAIVPRKYIRSQPQPKTNIASYST 198
           P +   S      + M     P+ +IR  PQ +TN+  YST
Sbjct: 242 PQQTSASSQQRAQETMAQQTEPQSHIRESPQKETNLEKYST 282



to top

>GUTR1_DROME (Q9NDM2) Gustatory receptor trehalose 1 (Trehalose receptor 1)|
          Length = 392

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 225 WLRLTADILSWHDGTIHPICQLAYSRN 305
           WL + A +++W    I+PI   A +RN
Sbjct: 303 WLHIIASVMAWASSVINPIIYAASNRN 329


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,947,179
Number of Sequences: 219361
Number of extensions: 722499
Number of successful extensions: 3061
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top