>dbj|AK064510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E05, full
            insert sequence
          Length = 1575

 Score =  107 bits (54), Expect = 4e-20
 Identities = 139/166 (83%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    aagagcacaaccggcgagnagctgggatttagttgtcgaggaggagacatactacgaggc 65
            ||||||||||| |||||| ||||||||||| || || || |||||||| |||||||||||
Sbjct: 1122 aagagcacaactggcgag-agctgggatttggtagttgatgaggagacgtactacgaggc 1180

                                                                        
Query: 66   ggaccctcactacgggtgggcggacgtcgtcggggactcgtcgcagctgctgtcgataca 125
            ||| ||||| ||||| ||||| || ||||| || |||||  | || || |||||||||||
Sbjct: 1181 ggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgataca 1240

                                                          
Query: 126  gccggtggagaggccaccaggggtgttcccaaccatagacttcagc 171
             || || || ||||||||||| |||| |||||| || |||||||||
Sbjct: 1241 acctgtcgaaaggccaccaggagtgtacccaactattgacttcagc 1286

>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                         
Query: 63    ggcggaccctcactacgggtgggcggacgtcgtcggggactcgtcgcagctgctgtcgat 122
             |||||| ||||| ||||| ||||| || ||||| || |||||  | || || ||||||||
Sbjct: 83278 ggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgat 83337

                                                              
Query: 123   acagccggtggagaggccaccaggggtgttcccaaccatagacttcagc 171
             ||| || || || ||||||||||| |||| |||||| || |||||||||
Sbjct: 83338 acaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagc 83386



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6     aagagcacaaccggcgagnagctgggatttagttgtcgaggaggagacatactacgag 63
             ||||||||||| |||||| ||||||||||| || || || |||||||| |||||||||
Sbjct: 83133 aagagcacaactggcgag-agctgggatttggtagttgatgaggagacgtactacgag 83189

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                           
Query: 63      ggcggaccctcactacgggtgggcggacgtcgtcggggactcgtcgcagctgctgtcgat 122
               |||||| ||||| ||||| ||||| || ||||| || |||||  | || || ||||||||
Sbjct: 1858416 ggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgat 1858475

                                                                
Query: 123     acagccggtggagaggccaccaggggtgttcccaaccatagacttcagc 171
               ||| || || || ||||||||||| |||| |||||| || |||||||||
Sbjct: 1858476 acaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagc 1858524



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                         
Query: 6       aagagcacaaccggcgagnagctgggatttagttgtcgaggaggagacatactacgag 63
               ||||||||||| |||||| ||||||||||| || || || |||||||| |||||||||
Sbjct: 1858271 aagagcacaactggcgag-agctgggatttggtagttgatgaggagacgtactacgag 1858327

>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
              complete sequence
          Length = 122218

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                          
Query: 63     ggcggaccctcactacgggtgggcggacgtcgtcggggactcgtcgcagctgctgtcgat 122
              |||||| ||||| ||||| ||||| || ||||| || |||||  | || || ||||||||
Sbjct: 116995 ggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgat 116936

                                                               
Query: 123    acagccggtggagaggccaccaggggtgttcccaaccatagacttcagc 171
              ||| || || || ||||||||||| |||| |||||| || |||||||||
Sbjct: 116935 acaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagc 116887



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                        
Query: 6      aagagcacaaccggcgagnagctgggatttagttgtcgaggaggagacatactacgag 63
              ||||||||||| |||||| ||||||||||| || || || |||||||| |||||||||
Sbjct: 117140 aagagcacaactggcgag-agctgggatttggtagttgatgaggagacgtactacgag 117084

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                           
Query: 63      ggcggaccctcactacgggtgggcggacgtcgtcggggactcgtcgcagctgctgtcgat 122
               |||||| ||||| ||||| ||||| || ||||| || |||||  | || || ||||||||
Sbjct: 1858414 ggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgat 1858473

                                                                
Query: 123     acagccggtggagaggccaccaggggtgttcccaaccatagacttcagc 171
               ||| || || || ||||||||||| |||| |||||| || |||||||||
Sbjct: 1858474 acaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagc 1858522



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                         
Query: 6       aagagcacaaccggcgagnagctgggatttagttgtcgaggaggagacatactacgag 63
               ||||||||||| |||||| ||||||||||| || || || |||||||| |||||||||
Sbjct: 1858269 aagagcacaactggcgag-agctgggatttggtagttgatgaggagacgtactacgag 1858325

>dbj|AB231018.1| Uncultured Bacteroidales bacterium gene for 16S rRNA, partial
           sequence, clone:HsW01-008
          Length = 1359

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 198 gcccggcatgccgccttcgcccatggagt 226
           ||||||||||||||||||||| |||||||
Sbjct: 715 gcccggcatgccgccttcgccaatggagt 687

>dbj|AB194940.1| Uncultured Bacteroidales bacterium gene for 16S rRNA, partial
           sequence, clone:HsH2-8
          Length = 1359

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 198 gcccggcatgccgccttcgcccatggagt 226
           ||||||||||||||||||||| |||||||
Sbjct: 715 gcccggcatgccgccttcgccaatggagt 687

>gb|AC127235.3| Mus musculus BAC clone RP24-570A23 from chromosome 10, complete sequence
          Length = 189180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 321    ggctttcattggttcattggt 341
              |||||||||||||||||||||
Sbjct: 174902 ggctttcattggttcattggt 174922

>gb|AC153926.10| Mus musculus 10 BAC RP23-68M7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191655

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    ggctttcattggttcattggt 341
              |||||||||||||||||||||
Sbjct: 173612 ggctttcattggttcattggt 173592

>emb|AL929216.6| Zebrafish DNA sequence from clone CH211-138G9 in linkage group 20,
             complete sequence
          Length = 174383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   tctcgccttcatgttctacta 384
             |||||||||||||||||||||
Sbjct: 74610 tctcgccttcatgttctacta 74630

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 182     cgcgcacggaggagccgcccggca 205
               ||||||| ||||||||||||||||
Sbjct: 2527229 cgcgcacagaggagccgcccggca 2527206

>gb|DQ219966.1| Lactobacillus reuteri phage terminase-like protein large subunit
           (lr1463) gene, complete cds
          Length = 1602

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 caaccatagacttcagctcg 174
           ||||||||||||||||||||
Sbjct: 326 caaccatagacttcagctcg 307

>gb|BC046098.2| Homo sapiens CBF1 interacting corepressor, transcript variant 1,
           mRNA (cDNA clone MGC:57509 IMAGE:5495320), complete cds
          Length = 1543

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 943 gaacacttgtttttctttct 924

>gb|AC122367.4| Mus musculus BAC clone RP23-449L24 from chromosome 12, complete
             sequence
          Length = 200004

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   aacacttgtttttctttctg 426
             ||||||||||||||||||||
Sbjct: 13817 aacacttgtttttctttctg 13836

>gb|BC031018.1| Homo sapiens CBF1 interacting corepressor, mRNA (cDNA clone
           IMAGE:4688373), containing frame-shift errors
          Length = 1303

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 923 gaacacttgtttttctttct 904

>gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, complete sequence
          Length = 190130

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   cacttgtttttctttctgac 428
             ||||||||||||||||||||
Sbjct: 75851 cacttgtttttctttctgac 75870

>emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 on chromosome 22, complete
              sequence
          Length = 135259

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    ggtggagaggccaccagggg 148
              ||||||||||||||||||||
Sbjct: 104409 ggtggagaggccaccagggg 104390

>emb|AL390037.16| Human DNA sequence from clone RP5-851M4 on chromosome 20 Contains ESTs,
             STSs and GSSs, complete sequence
          Length = 79531

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ggagaggccaccaggggtgt 151
             ||||||||||||||||||||
Sbjct: 17908 ggagaggccaccaggggtgt 17889

>gb|DQ014840.1| Uncultured bacterium clone M1_d01_3 16S ribosomal RNA gene, partial
           sequence
          Length = 1352

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 gcccggcatgccgccttcgc 217
           ||||||||||||||||||||
Sbjct: 720 gcccggcatgccgccttcgc 701

>gb|BC015040.1| Homo sapiens CBF1 interacting corepressor, transcript variant 2,
           mRNA (cDNA clone IMAGE:3910222), complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 974 gaacacttgtttttctttct 955

>ref|NM_004882.3| Homo sapiens CBF1 interacting corepressor (CIR), mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 992 gaacacttgtttttctttct 973

>emb|CR611416.1| full-length cDNA clone CS0DI081YI03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1919

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 989 gaacacttgtttttctttct 970

>emb|CR601497.1| full-length cDNA clone CS0DI062YF07 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1485

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 957 gaacacttgtttttctttct 938

>emb|CR599038.1| full-length cDNA clone CS0DI026YD12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1531

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 976 gaacacttgtttttctttct 957

>emb|CR593259.1| full-length cDNA clone CS0DI007YO05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1572

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 989 gaacacttgtttttctttct 970

>gb|AC096747.3| Homo sapiens BAC clone RP11-396I22 from 4, complete sequence
          Length = 206789

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   gaacacttgtttttctttct 425
             ||||||||||||||||||||
Sbjct: 27951 gaacacttgtttttctttct 27932

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 322      gctttcattggttcattggt 341
                ||||||||||||||||||||
Sbjct: 15878730 gctttcattggttcattggt 15878749

>gb|AC018470.11| Homo sapiens BAC clone RP11-572N21 from 2, complete sequence
          Length = 174437

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   gaacacttgtttttctttct 425
             ||||||||||||||||||||
Sbjct: 44596 gaacacttgtttttctttct 44615

>gb|AC154562.2| Mus musculus BAC clone RP23-400N5 from chromosome 14, complete sequence
          Length = 180365

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    atggagtgagtttgcagtag 239
              ||||||||||||||||||||
Sbjct: 144526 atggagtgagtttgcagtag 144545

>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0027N13
          Length = 179669

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    gctttcattggttcattggt 341
              ||||||||||||||||||||
Sbjct: 118244 gctttcattggttcattggt 118263

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 188     cggaggagccgcccggcatgccgccttc 215
               |||||||||||||||||| || ||||||
Sbjct: 1208483 cggaggagccgcccggcacgcggccttc 1208510

>gb|AF098297.1|AF098297 Homo sapiens CBF1 interacting corepressor CIR mRNA, complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 899 gaacacttgtttttctttct 880

>emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chromosome 3, complete
             sequence
          Length = 199673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   cacttgtttttctttctgac 428
             ||||||||||||||||||||
Sbjct: 26153 cacttgtttttctttctgac 26172

>gb|U03644.1|HSU03644 Human recepin mRNA, complete cds
          Length = 1519

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gaacacttgtttttctttct 425
           ||||||||||||||||||||
Sbjct: 934 gaacacttgtttttctttct 915


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,705,715
Number of Sequences: 3902068
Number of extensions: 3705715
Number of successful extensions: 63879
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63724
Number of HSP's gapped (non-prelim): 150
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)