ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4f22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 212 bits (107), Expect = 9e-52 Identities = 134/143 (93%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 327 aacgggcggctcgccatgctcgccttcgtcggcttctggttccaggccgtgtacacgggc 386 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccggccactgcaacatcttc 129 ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 387 cagggccccatcgacaacctgctcgcgcacctcgccgaccccggccactgcaacatcttc 446 Query: 130 tcggcattcacgtcccactgatc 152 ||||| ||||||||||||||||| Sbjct: 447 tcggcgttcacgtcccactgatc 469
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccagggcccc 78 |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 730 ctcgccatgctcgccttcgtggggttctggttccaggccgtctacaccggcgagggcccc 789 Query: 79 ctcgacaacctcttcgcccacctcgccgaccccggccactgcaacatcttctcggcattc 138 | || |||||| | ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 790 attgataacctcctgcatcacctcgccgaccccggccactgcaacgtcttctcggcattc 849 Query: 139 acgtccca 146 |||||||| Sbjct: 850 acgtccca 857
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 133 bits (67), Expect = 7e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccagggcccc 78 |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 16234607 ctcgccatgctcgccttcgtggggttctggttccaggccgtctacaccggcgagggcccc 16234666 Query: 79 ctcgacaacctcttcgcccacctcgccgaccccggccactgcaacatcttctcgg 133 | || |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 16234667 attgataacctcctgcatcacctcgccgaccccggccactgcaacgtcttctcgg 16234721 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 10793630 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 10793689 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 10793690 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 10793732
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 133 bits (67), Expect = 7e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccagggcccc 78 |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 51123 ctcgccatgctcgccttcgtggggttctggttccaggccgtctacaccggcgagggcccc 51182 Query: 79 ctcgacaacctcttcgcccacctcgccgaccccggccactgcaacatcttctcgg 133 | || |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 51183 attgataacctcctgcatcacctcgccgaccccggccactgcaacgtcttctcgg 51237
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 133 bits (67), Expect = 7e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccagggcccc 78 |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 139208 ctcgccatgctcgccttcgtggggttctggttccaggccgtctacaccggcgagggcccc 139267 Query: 79 ctcgacaacctcttcgcccacctcgccgaccccggccactgcaacatcttctcgg 133 | || |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 139268 attgataacctcctgcatcacctcgccgaccccggccactgcaacgtcttctcgg 139322
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 111 bits (56), Expect = 2e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||| |||||||||||||||||| || | ||| |||||||||||||| ||||||||| Sbjct: 831 aacggacgcctcgccatgctcgccgtcatgggcgcctggttccaggccgagtacaccggc 890 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccggccac 117 |||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 891 accggccccatcgacaacctcttcgcccacctcgccgaccctggccac 938
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||||||||| || | ||| ||||||||||||| ||||||||| Sbjct: 667 ggccgcctcgccatgctcgccgtcatgggcgcgtggttccaggccgagtacaccggcacc 726 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccggccac 117 |||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 727 ggccccatcgacaacctcttcgctcacctcgccgaccccggccac 771
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||||||||| |||||||||||| || | ||| ||||||||||||| ||||||||| Sbjct: 708 aacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggccgagtacaccggc 767 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccggcca 116 |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 768 accggccccatcgacaacctcttcgctcacctcgccgaccccggcca 814
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 714 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 773 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 774 gaccccggccac 785
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 715 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 774 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 775 gaccccggccac 786
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 717 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 776 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 777 gaccccggccac 788
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 720 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 779 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 780 gaccccggccac 791
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 720 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 779 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 780 gaccccggccac 791
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 721 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 780 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 781 gaccccggccac 792
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 721 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 780 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 781 gaccccggccac 792
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 724 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 783 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 784 gaccccggccac 795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 23305228 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 23305287 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 23305288 gaccccggccac 23305299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 22434723 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 22434782 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 22434783 ggccccttggagaacctgctcgaccacctcgccgaccccg 22434822 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 22263190 ccgcctcgccatggtcgccttcctcggcttc 22263160
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 60486 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 60545 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 60546 gaccccggccac 60557
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 735 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 794 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 795 gaccccggccac 806
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 721 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 780 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 781 gaccccggccac 792
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 721 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 780 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 781 gaccccggccac 792
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 751 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 810 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 811 gaccccggccac 822
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 717 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 776 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 777 gaccccggccac 788
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 720 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 779 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 780 gaccccggccac 791
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 714 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 773 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 774 gaccccggccac 785
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 715 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 774 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 775 gaccccggccac 786
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 1011 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 1070 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 1071 gaccccggccac 1082
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 46 tggttccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgcc 105 ||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 724 tggttccaggcagagtacaccggcaccggccccatcgacaacctcttcgcccatctcgcc 783 Query: 106 gaccccggccac 117 |||||||||||| Sbjct: 784 gaccccggccac 795
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 634 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 693 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 694 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 736
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 79124 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 79065 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 79064 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 79022
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 21808692 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 21808751 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 21808752 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 21808794 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cggccagggccccctcgaca 85 |||||||||||||||||||| Sbjct: 32554845 cggccagggccccctcgaca 32554864 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 attctactcctactagtact 367 |||||||||||||||||||| Sbjct: 2729238 attctactcctactagtact 2729219
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 1095 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 1154 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 1155 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 1197
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 21801721 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 21801780 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 21801781 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 21801823 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cggccagggccccctcgaca 85 |||||||||||||||||||| Sbjct: 32645355 cggccagggccccctcgaca 32645374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 attctactcctactagtact 367 |||||||||||||||||||| Sbjct: 2729348 attctactcctactagtact 2729329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 23604177 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 23604236 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 23604237 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 23604279
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 17353 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 17412 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 17413 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 17455
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 66876 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 66935 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 66936 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 66978
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 130248 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 130307 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 130308 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 130350
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 705 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 764 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 765 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 807
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 704 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 763 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 764 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 806
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 1134 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 1193 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 1194 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 1236
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 698 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 757 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 758 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 800
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 703 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 762 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 763 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 805
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 705 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 764 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 765 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 807
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 691 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 750 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 751 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 793
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 703 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 762 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 763 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 805
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 266 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 325 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 326 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 368
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 703 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 762 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||||||||||||| Sbjct: 763 aagggccccctcgagaacctcgccgaccacctcgccgaccccg 805
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| |||||||| || ||||||| Sbjct: 680 aacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggc 739 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 740 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 782
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 687 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 746 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||| |||||| || ||||||||||||||||| Sbjct: 747 ggccccctcgagaacctcgccgaccacctcgccgaccccg 786
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctg 47 |||||||||||||||||||| ||||||||||||||||| Sbjct: 647 aacggccgcctcgccatgctggccttcgtcggcttctg 684
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | ||||||||| | |||||| || ||||||| Sbjct: 712 aacggccgcctcgccatgttctccatgttcggcttcttcgtgcaggccatcgtcaccggc 771 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||||||||| |||||| || ||||||| ||||||||| Sbjct: 772 aagggccccctcgagaacctcgccgaccacctctccgaccccg 814
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||||||||| |||||| || || | ||||||||| | |||||| || ||||||| Sbjct: 676 aacggccgccttgccatgttctccatgttcggcttcttcgtgcaggccatcgtcaccggc 735 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 736 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 778
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | |||| |||| |||||||| || ||||||| Sbjct: 658 aacggccgcctcgccatgttctccatgttcgggttcttcgtccaggccatcgtcaccggc 717 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||| ||||| |||||| || ||||||||||||||||| Sbjct: 718 aagggcccgctcgagaacctcgccgaccacctcgccgaccccg 760
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 50 tccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgccgacc 109 |||||||| || ||||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 274 tccaggccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgacc 333 Query: 110 ccg 112 ||| Sbjct: 334 ccg 336
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||||||||| |||||| || || | ||||||||| | |||||| || ||||||| Sbjct: 324 aacggccgccttgccatgttctccatgttcggcttcttcgtgcaggccatcgtcaccggc 383 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| |||||||||||| Sbjct: 384 aagggccccatcgagaacctcttcgaccacgtcgccgaccccg 426
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| || || | |||| |||| |||||||| || ||||||| Sbjct: 672 aacggccgcctcgccatgttctccatgttcggattcttcgtccaggccatcgtcaccggc 731 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||||| |||| |||||||||| |||| || ||||||||| Sbjct: 732 aagggccccatcgagaacctcttcgaccacgtcaccgaccccg 774
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 686 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 745 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 746 ggccccttggagaacctgctcgaccacctcgccgaccccg 785
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 710 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 769 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 770 ggccccttggagaacctgctcgaccacctcgccgaccccg 809
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 710 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 769 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 770 ggccccttggagaacctgctcgaccacctcgccgaccccg 809
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 712 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 771 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 772 ggccccttggagaacctgctcgaccacctcgccgaccccg 811
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 717 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 776 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 777 ggccccttggagaacctgctcgaccacctcgccgaccccg 816
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 750 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 809 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 810 ggccccttggagaacctgctcgaccacctcgccgaccccg 849
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 95790 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 95849 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 95850 ggccccttggagaacctgctcgaccacctcgccgaccccg 95889
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 686 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 745 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 746 ggccccttggagaacctgctcgaccacctcgccgaccccg 785
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 710 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 769 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 770 ggccccttggagaacctgctcgaccacctcgccgaccccg 809
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 710 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 769 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 770 ggccccttggagaacctgctcgaccacctcgccgaccccg 809
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 717 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 776 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 777 ggccccttggagaacctgctcgaccacctcgccgaccccg 816
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| |||||||| || ||||||| || Sbjct: 715 ggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaag 774 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 775 ggccccttggagaacctgctcgaccacctcgccgaccccg 814
>gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophyll A/B binding protein mRNA, partial cds Length = 191 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/50 (86%) Strand = Plus / Plus Query: 63 caccggccagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 ||||||| |||||||| |||| |||||||||| |||| | ||||||||| Sbjct: 11 caccggcaagggccccatcgagaacctcttcgaccacgtssccgaccccg 60
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggc 42 |||||||||||||||||| ||||||||| |||| Sbjct: 9099 aacggccgcctcgccatgatcgccttcggcggc 9131
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 599 ctcgccatgctcgccttcctcggcttct 626
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 730 ctcgccatgctcgccttcctcggcttct 757
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 739 ctcgccatgctcgccttcctcggcttct 766
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 745 ctcgccatgctcgccttcctcggcttct 772
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 745 ctcgccatgctcgccttcctcggcttct 772
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 635 ctcgccatgctcgccttcctcggcttct 662
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 763 ctcgccatgctcgccttcctcggcttct 790
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 763 ctcgccatgctcgccttcctcggcttct 790
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 766 ctcgccatgctcgccttcctcggcttct 793
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 766 ctcgccatgctcgccttcctcggcttct 793
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 769 ctcgccatgctcgccttcctcggcttct 796
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 786 ctcgccatgctcgccttcctcggcttct 813
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 816 ctcgccatgctcgccttcctcggcttct 843
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 746 ctcgccatgctcgccttcctcggcttct 773
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcg 37 |||||||||||||||||| ||||||||| Sbjct: 522 aacggccgcctcgccatgatcgccttcg 549
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 5469030 ctcgccatgctcgccttcctcggcttct 5469003 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 344154 acggccgcctcgccatgctc 344173
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 122611 ctcgccatgctcgccttcctcggcttct 122584
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 13765 ctcgccatgctcgccttcctcggcttct 13738
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 746 ctcgccatgctcgccttcctcggcttct 773
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 816 ctcgccatgctcgccttcctcggcttct 843
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 730 ctcgccatgctcgccttcctcggcttct 757
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 766 ctcgccatgctcgccttcctcggcttct 793
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 739 ctcgccatgctcgccttcctcggcttct 766
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 745 ctcgccatgctcgccttcctcggcttct 772
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 744 ctcgccatgctcgccttcctcggcttct 771
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 763 ctcgccatgctcgccttcctcggcttct 790
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 766 ctcgccatgctcgccttcctcggcttct 793
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 769 ctcgccatgctcgccttcctcggcttct 796
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 763 ctcgccatgctcgccttcctcggcttct 790
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 48.1 bits (24), Expect = 0.031 Identities = 81/100 (81%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggccag 72 ||||||||||||||| || || | ||||||||| ||||| || || ||||||| || Sbjct: 711 ggccgcctcgccatgttctccatgttcggcttcttcgtccagaccatcgtcaccggcaag 770 Query: 73 ggccccctcgacaacctcttcgcccacctcgccgaccccg 112 |||||| | || ||||| ||| ||||||||||||||||| Sbjct: 771 ggccccttggagaacctgctcgaccacctcgccgaccccg 810
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 635 ctcgccatgctcgccttcctcggcttct 662
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 786 ctcgccatgctcgccttcctcggcttct 813
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 ctcgccatgctcgccttcgtcggcttct 46 |||||||||||||||||| ||||||||| Sbjct: 747 ctcgccatgctcgccttcctcggcttct 774
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 779 ccgcctcgccatggtcgccttcctcggcttc 809
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 774 ccgcctcgccatggtcgccttcctcggcttc 804
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 781 ccgcctcgccatggtcgccttcctcggcttc 811
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 781 ccgcctcgccatggtcgccttcctcggcttc 811
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 795 ccgcctcgccatggtcgccttcctcggcttc 825
>gb|AY171231.1| Chlamydomonas reinhardtii light-harvesting complex I protein (Lhca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1274 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccggccagggccccctcgacaacct 89 ||||||| ||||||||||||||||||| Sbjct: 637 caccggcaagggccccctcgacaacct 663
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 68436 ccgcctcgccatggtcgccttcctcggcttc 68406
>dbj|AB122120.1| Chlamydomonas reinhardtii LhcI-7 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2261 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccggccagggccccctcgacaacct 89 ||||||| ||||||||||||||||||| Sbjct: 1842 caccggcaagggccccctcgacaacct 1868
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 781 ccgcctcgccatggtcgccttcctcggcttc 811
>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein Length = 470 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 95 ccgcctcgccatggtcgccttcctcggcttc 125
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 774 ccgcctcgccatggtcgccttcctcggcttc 804
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 788 ccgcctcgccatggtcgccttcctcggcttc 818
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 781 ccgcctcgccatggtcgccttcctcggcttc 811
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 779 ccgcctcgccatggtcgccttcctcggcttc 809
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 795 ccgcctcgccatggtcgccttcctcggcttc 825
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 15 ccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||||| |||||||| |||||||| Sbjct: 779 ccgcctcgccatggtcgccttcctcggcttc 809
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tccaggccgtctacaccggccagggccccctcgacaacctcttcgcccacctcgccgacc 109 |||||||| || ||||||| |||||||| |||| ||| | |||| |||| ||||||||| Sbjct: 727 tccaggccatcgtcaccggcaagggccccatcgagaactttttcgaccacgtcgccgacc 786 Query: 110 ccg 112 ||| Sbjct: 787 ccg 789
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 46.1 bits (23), Expect = 0.12 Identities = 83/103 (80%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 ||||||||||| |||||| || || | |||| |||| |||||||| || ||||||| Sbjct: 719 aacggccgcctggccatgttctccatgttcggtttcttcgtccaggccatcgtcaccggc 778 Query: 70 cagggccccctcgacaacctcttcgcccacctcgccgaccccg 112 | |||||| |||| |||||| || ||||||||||||||||| Sbjct: 779 aaaggccccatcgagaacctcgccgaccacctcgccgaccccg 821
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gggtgtcatcttgccctttgga 244 |||||||||||||||||||||| Sbjct: 132720 gggtgtcatcttgccctttgga 132699
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 cttcgcccacctcgccgacccc 111 |||||||||||||||||||||| Sbjct: 85456 cttcgcccacctcgccgacccc 85435
>ref|XM_585782.2| PREDICTED: Bos taurus similar to low density lipoprotein receptor-related protein 11 (LOC508927), mRNA Length = 989 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 caaacccagggccagaggcagc 525 |||||||||||||||||||||| Sbjct: 681 caaacccagggccagaggcagc 660
>ref|XM_567613.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK00440) partial mRNA Length = 1551 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gggtgtcatcttgccctttgga 244 |||||||||||||||||||||| Sbjct: 871 gggtgtcatcttgccctttgga 850
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 cgacaacctcttcgcccacctcgccg 106 |||||||||||||| ||||||||||| Sbjct: 270900 cgacaacctcttcggccacctcgccg 270925
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 cttcgcccacctcgccgacccc 111 |||||||||||||||||||||| Sbjct: 568057 cttcgcccacctcgccgacccc 568036
>gb|AE004831.1| Pseudomonas aeruginosa PAO1, section 392 of 529 of the complete genome Length = 15088 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 26 tgctcgccttcgtcggcttctggttc 51 |||| ||||||||||||||||||||| Sbjct: 6346 tgctggccttcgtcggcttctggttc 6321
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cgcctcgccatgctcgccttcgtcggcttc 45 |||||||||||| |||||||| |||||||| Sbjct: 749 cgcctcgccatggtcgccttcctcggcttc 778
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cgcctcgccatgctcgccttcgtcggcttc 45 |||||||||||| |||||||| |||||||| Sbjct: 794 cgcctcgccatggtcgccttcctcggcttc 823
>gb|AC158933.3| Mus musculus chromosome 1, clone RP23-300M22, complete sequence Length = 152221 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ccctggacacctatttctatg 464 ||||||||||||||||||||| Sbjct: 65967 ccctggacacctatttctatg 65947
>emb|AL133548.6| Human DNA sequence from clone RP11-235O14 on chromosome 9q13-21.2 Contains a novel gene (FLJ20559), the OSTF1 gene for osteoclast stimulating factor 1 (OSF, SH3P2) and a CpG island, complete sequence Length = 153392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 tggaaaatgtgaatattgcag 261 ||||||||||||||||||||| Sbjct: 94775 tggaaaatgtgaatattgcag 94795
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 ctcttcgcccacctcgccgaccccg 112 ||||||| ||||||||||||||||| Sbjct: 2133196 ctcttcgaccacctcgccgaccccg 2133220
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggccgtctacaccggc 69 |||||||||||||||||| | || | ||||||||| |||||||| || ||||||| Sbjct: 1528 aacggccgcctcgccatgttttccatgttcggcttcttcgtccaggccatcgtcaccggc 1587 Query: 70 cagggccccctcgacaacctc 90 ||||||| ||||| |||||| Sbjct: 1588 aagggcccgctcgagaacctc 1608
>ref|XM_481033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctcgccatgctcgccttcg 37 |||||||||||||||||||| Sbjct: 363 cctcgccatgctcgccttcg 382
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 524 acggccgcctcgccatgctc 543
>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete sequence Length = 188947 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 caaacccagggccagaggcagcgt 527 |||||||||||||| ||||||||| Sbjct: 87150 caaacccagggccacaggcagcgt 87127
>gb|AC147175.2| Xenopus tropicalis clone CH216-54E8, complete sequence Length = 187921 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 gtgtgcagtgtatgtaaaacaaaa 549 ||||||||||||||||||| |||| Sbjct: 21846 gtgtgcagtgtatgtaaaaaaaaa 21869
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 caaacccagggccagaggcagcgt 527 |||||||||||||| ||||||||| Sbjct: 6109 caaacccagggccacaggcagcgt 6132
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 63 caccggccagggccccctcgacaacctcttcgcccacctcgccgaccc 110 |||||||||| ||||||| || ||||| | |||||||||||| |||| Sbjct: 3780 caccggccagagccccctggagaacctgtctgcccacctcgccaaccc 3827
>gb|AC123543.3| Lemur catta clone LB2-212N12, complete sequence Length = 203201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 cacaaacccagggccagagg 521 |||||||||||||||||||| Sbjct: 189425 cacaaacccagggccagagg 189406
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gctttgggggtgtcatcttg 235 |||||||||||||||||||| Sbjct: 177751 gctttgggggtgtcatcttg 177732
>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence Length = 216377 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caacttgggccagaacaaaattctactc 356 |||||| ||||||||||||| ||||||| Sbjct: 91171 caactttggccagaacaaaagtctactc 91144
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcctcgccatgctcgccttc 36 |||||||||||||||||||| Sbjct: 2893405 gcctcgccatgctcgccttc 2893424
>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1 Contains a keratin 18 (KRT18) pseudogene, the 3' end of the RAP1A gene for RAP1A member of RAS oncogene family, three novel genes, the DDX20 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, the 3' end of the KCND3 gene for potassium voltage-gated channel Shal-related subfamily member 3 and two CpG islands, complete sequence Length = 128379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 caacttgggccagaacaaaa 348 |||||||||||||||||||| Sbjct: 75621 caacttgggccagaacaaaa 75602
>gb|DQ118614.1| Karlodinium micrum isolate 7797 chloroplast light harvesting protein isoform 5 mRNA, partial cds; nuclear gene for chloroplast product Length = 726 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ggccgcctcgccatgctcgc 32 |||||||||||||||||||| Sbjct: 672 ggccgcctcgccatgctcgc 691
>gb|DQ118577.1| Isochrysis galbana isolate 1517 chloroplast light harvesting protein isoform 5 mRNA, complete cds; nuclear gene for chloroplast product Length = 775 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgcc 33 |||||||||||||||||| ||||| Sbjct: 614 aacggccgcctcgccatgatcgcc 637
>gb|AF244524.1| Chlamydomonas reinhardtii chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1413 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttctggttccaggcc 57 ||||||||||| |||||| | |||||| | |||||||| |||||||| Sbjct: 509 aacggccgcctggccatggttgccttcattggcttctgcgtccaggcc 556
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 cacaaacccagggccagagg 521 |||||||||||||||||||| Sbjct: 1194765 cacaaacccagggccagagg 1194746
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgcagcgggaaatgggccgg 287 |||||||||||||||||||| Sbjct: 78595 cgcagcgggaaatgggccgg 78614
>dbj|AK052157.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330001K12 product:Warning: possibly chimeric clone, full insert sequence Length = 2655 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 actaccacagaccaagcagt 384 |||||||||||||||||||| Sbjct: 2 actaccacagaccaagcagt 21
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctcgccttcgtcggc 42 ||||||| |||||||||||||||||| |||| Sbjct: 276 acggccgtatcgccatgctcgccttcgccggc 307
>tpg|BK000088.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C3 gene, complete cds Length = 4915 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctcgccatgctcgccttcg 37 |||||||||||||||||||| Sbjct: 796 cctcgccatgctcgccttcg 815
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 5313 acggccgcctcgccatgctc 5332
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 73 acggccgcctcgccatgctc 92
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcaacatcttctcggcattc 138 |||||||||||||||||||| Sbjct: 16922352 gcaacatcttctcggcattc 16922333
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctcgccatgctcgccttcg 37 |||||||||||||||||||| Sbjct: 9377359 cctcgccatgctcgccttcg 9377378
>gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR04F03, complete sequence Length = 150587 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgcagcgggaaatgggccgg 287 |||||||||||||||||||| Sbjct: 27684 cgcagcgggaaatgggccgg 27703
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 cacaaacccagggccagagg 521 |||||||||||||||||||| Sbjct: 1263327 cacaaacccagggccagagg 1263308
>gb|AY826902.1| Heterocapsa triquetra clone HTLHC6711 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1598 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctcgccttcgtcggc 42 |||||||| || ||||||||||||||||||| Sbjct: 495 acggccgcgtctgcatgctcgccttcgtcggc 526
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cgacaacctcttcgcccacctcgc 104 |||||||||||||| ||||||||| Sbjct: 2365308 cgacaacctcttcggccacctcgc 2365285
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cggccagggccccctcgaca 85 |||||||||||||||||||| Sbjct: 88294 cggccagggccccctcgaca 88313
>gb|AC123971.3| Lemur catta clone LB2-255J23, complete sequence Length = 222919 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 cacaaacccagggccagagg 521 |||||||||||||||||||| Sbjct: 18322 cacaaacccagggccagagg 18303
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 attctactcctactagtact 367 |||||||||||||||||||| Sbjct: 1194 attctactcctactagtact 1175
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 1206 acggccgcctcgccatgctc 1225
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 attctactcctactagtact 367 |||||||||||||||||||| Sbjct: 74157 attctactcctactagtact 74138
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctcgccatgctcgccttcg 37 |||||||||||||||||||| Sbjct: 1950 cctcgccatgctcgccttcg 1969
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cgccatgctcgccttcgtcg 40 |||||||||||||||||||| Sbjct: 5647082 cgccatgctcgccttcgtcg 5647063
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 72938 acggccgcctcgccatgctc 72957
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcgtcggcttc 45 ||||||||||| |||||||| |||||| | |||||| Sbjct: 1666 aacggccgcctggccatgctggccttcctgggcttc 1701
>gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, complete sequence Length = 186276 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caacttgggccagaacaaaattctactc 356 |||||| ||||||||||||| ||||||| Sbjct: 68887 caactttggccagaacaaaagtctactc 68860
>dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1575_B01 Length = 86158 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctcgccatgctcgccttcg 37 |||||||||||||||||||| Sbjct: 53588 cctcgccatgctcgccttcg 53607
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 724 acggccgcctcgccatgctc 743
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 142 acggccgcctcgccatgctc 161
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgcagcgggaaatgggccgg 287 |||||||||||||||||||| Sbjct: 114806 cgcagcgggaaatgggccgg 114825
>emb|AL662991.3|OSJN00191 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002N06, complete sequence Length = 100589 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcaacatcttctcggcattc 138 |||||||||||||||||||| Sbjct: 46177 gcaacatcttctcggcattc 46158
>gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, complete sequence Length = 202768 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gctttgggggtgtcatcttg 235 |||||||||||||||||||| Sbjct: 192848 gctttgggggtgtcatcttg 192867
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 305 acggccgcctcgccatgctc 324
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 acggccgcctcgccatgctc 30 |||||||||||||||||||| Sbjct: 305 acggccgcctcgccatgctc 324
>gb|AC139846.4| Mus musculus BAC clone RP23-385F3 from 8, complete sequence Length = 191571 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 actaccacagaccaagcagt 384 |||||||||||||||||||| Sbjct: 149852 actaccacagaccaagcagt 149833
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 aacggccgcctcgccatgctcgccttcg 37 ||||||||||| |||||||| ||||||| Sbjct: 675 aacggccgcctggccatgctggccttcg 702
>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete sequence Length = 175563 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gctttgggggtgtcatcttgccct 239 |||||||||||||||| ||||||| Sbjct: 130095 gctttgggggtgtcatattgccct 130118
>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3 Length = 214384 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gctttgggggtgtcatcttgccct 239 |||||||||||||||| ||||||| Sbjct: 193210 gctttgggggtgtcatattgccct 193187
>emb|AJ310609.1|SMA310609 Schistosoma mansoni partial hsp70 gene, promoter region Length = 517 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 tttctatgaccttcaatagaaaac 480 |||||||||||||| ||||||||| Sbjct: 413 tttctatgaccttcgatagaaaac 390
>gb|L02415.1|SCMHSP70X Schistosoma mansoni heat shock protein 70 (HSP70) gene, complete cds Length = 3511 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 tttctatgaccttcaatagaaaac 480 |||||||||||||| ||||||||| Sbjct: 425 tttctatgaccttcgatagaaaac 402 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,493,282 Number of Sequences: 3902068 Number of extensions: 4493282 Number of successful extensions: 86199 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 85136 Number of HSP's gapped (non-prelim): 1054 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
