>SYM_STRCO (Q9F2I9) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 538

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 168 LPGRYEAL-WKEVDGVKQLWKNRKELRVEDLGIATLFGVELYAWFCLGEIA 317
           LPG+  A  W  V G K    N   ++ +DL   T FGV+ Y W+ L  IA
Sbjct: 297 LPGKIAANGWLMVGGEKMSKSNLTGIKPQDL--TTHFGVDAYRWYFLRAIA 345

>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 62  LQGGDGEEQAVRRAAPLRGEVPGALQAALLHAPR 163
           LQ G+G + A R+AAP +   P   QAA   APR
Sbjct: 50  LQQGNGGKAAPRKAAPAKPGAPSPAQAARPAAPR 83

>ATP5L_PONPY (Q5RFH0) ATP synthase subunit g, mitochondrial (EC 3.6.3.14)|
           (ATPase subunit g)
          Length = 103

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +3

Query: 147 FYTRLASLPGRYEALWKEVDGVKQLWKNR-----KELRVEDLGIATLFGVELYAWFCLGE 311
           +Y ++  +P     + + + G+K++  +      K+L V++  +  L   E+  WF +GE
Sbjct: 32  YYAKVELVPPTPAEIPRAIQGLKKIVNSAQTGSFKQLTVKEAVLNGLVATEVLMWFYVGE 91

Query: 312 IAGRGFTLTGYKV 350
           I G+   + GY V
Sbjct: 92  IIGKR-GIIGYDV 103

>ATP5L_BOVIN (Q28852) ATP synthase subunit g, mitochondrial (EC 3.6.3.14)|
           (ATPase subunit g)
          Length = 102

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +3

Query: 162 ASLPGRYEALWKEVDGVKQLWKNRKELRVEDLGIATLFGVELYAWFCLGEIAGRGFTLTG 341
           A +P   ++L K ++  K    + K+L V++  +  L   E++ WF +GEI G+   + G
Sbjct: 43  AEIPTAIQSLKKIINSAKT--GSFKQLTVKEALLNGLVATEVWMWFYVGEIIGKR-GIIG 99

Query: 342 YKV 350
           Y V
Sbjct: 100 YDV 102

>SMC_METJA (Q59037) Chromosome partition protein smc homolog|
          Length = 1169

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 63   YKEAMEKNKQYVVQPPS----VEKCQELSKQLFYTRLASLPGRYEALWKEVDGVKQL 221
            YKE +EK K+Y          +E+ +   K++F      +   +E ++KE+ G+ +L
Sbjct: 995  YKELIEKRKEYERDEKKYLQLMEELENKKKEVFMEVFNKVAKNFEEVYKEIGGIGKL 1051


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,738,035
Number of Sequences: 219361
Number of extensions: 1088335
Number of successful extensions: 3129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3129
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)